Homology
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A6H5JLC1_9PHAE (Deubiquitinating enzyme A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC1_9PHAE)
HSP 1 Score: 526 bits (1355), Expect = 1.280e-167
Identity = 375/599 (62.60%), Postives = 401/599 (66.94%), Query Frame = 1
Query: 1888 MRVLLPDGEEKGPADSRFTPPATTE--NTNSAAGLAQQQQQHLP-----GRSSTLLARAPPAEAPPDRQASATNGKQRPSNAARPGVSEPSTENDVGVEGEVKDDERDVDATTATTAPEGKRAAAGTSACDVSRAAGISSTSRGGS--GSGVTPTGRLS-------VEDETERAFEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHQVFPGESSAFFKGGRGERDSFGTDFGDSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXATQEELEQAAITASFAEFHGTSGSGGGSSSSDKGASAFPLPRRGGRGVGIPSGGRFVARGADRGSVGRGERRGGGAAVSPVGIGSGAGRAEGGGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSPSSADSSTSSAVREMVWSYGFPLARVLHAHDLVGESVEDMLVLLTSDAFQPPEAGD 3636
MRVLLPDGEEKG D F P AT N + AAGL Q HLP + RAP EA D TNGKQRP+N V+EPS +N + +E V DD RDV + A +G R AA TSA D + S GS + P G LS E++ E AFEAEL+AKGW+LRRQEGDGNCLFRAISQ IYGDPGMHGDIRRQCLDFMRKERDHYSQFVSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGT PINIFHGGYRSGNAPIRVSYHGGNHYNA++DPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAH VF GES FFKGGRG SFG FG+SDL AT+EELEQAAITAS A+F GT+G +AF +PRRGGRG SGGRF+ RGA G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SP+SAD STSSAVREMVWSYGFPLARV+ AHDLVGESVEDMLVLLTSD FQPPE GD
Sbjct: 1 MRVLLPDGEEKG-NDPSFAPVATATPGNDDDAAGLGPSPQ-HLPVSPHADQPPQPHPRAPSREAAADVLRPRTNGKQRPTN-----VAEPSKDN-IALEANV-DDGRDV---STANAAQGFRPAARTSARDAADRFSSSGAXXXXXXXGSRIEPRGGLSQEAAAVATENDMEEAFEAELKAKGWQLRRQEGDGNCLFRAISQQIYGDPGMHGDIRRQCLDFMRKERDHYSQFVSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTAPINIFHGGYRSGNAPIRVSYHGGNHYNAIVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHHVFSGESPTFFKGGRGTHGSFGEGFGESDLR--------------------------ATEEELEQAAITASLADFRGTTGXXXXXXXXKSDGAAFSVPRRGGRG----SGGRFIGRGAASRVSGXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSPPGEGSRKASPNSADGSTSSAVREMVWSYGFPLARVVAAHDLVGESVEDMLVLLTSDGFQPPENGD 546
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
D7G475_ECTSI (Deubiquitinating enzyme A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G475_ECTSI)
HSP 1 Score: 446 bits (1146), Expect = 2.120e-140
Identity = 265/391 (67.77%), Postives = 280/391 (71.61%), Query Frame = 1
Query: 2467 MHGDIRRQCLDFMRKERDHYSQFVSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHQVFPGESSAFFKGGRGERDSFGTDFGDSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXATQEELEQAAITASFAEFHGTSGSGGGSSSSDKGASAFPLPRRGGRGVGIPSGGRFVARGA-DRGSVGRGERRGGGAAVSPVGIGSGAGRAEGGGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSPSSADSSTSSAVREMVWSYGFPLARVLHAHDLVGESVEDMLVLLTSDAFQPPEAGD 3636
MHGDIRRQCLDFMRKERDHYSQFVSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGT PINIFHGGYRSGNAPIRVSYHGGNHYNA++DPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAH VFPG S FFKGGRG SFG FG+SD+ AT+EELEQAAITAS ++F GT+ GG S++ +AF +PRRGGRG SGGRF+ RGA R S GR GAA G GS AGR E GGW XXX XXXXX SP+SAD STSSAVREMVWSYGFPLARV+ AHDLVGESVEDMLVLLTSDAFQPPE GD
Sbjct: 1 MHGDIRRQCLDFMRKERDHYSQFVSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTAPINIFHGGYRSGNAPIRVSYHGGNHYNAIVDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHHVFPGASPTFFKGGRGMHGSFGEGFGESDVR--------------------------ATEEELEQAAITASLSDFRGTTSGGGSSNNGKSDGAAFSVPRRGGRG----SGGRFIGRGAASRVSGGREXXXXXGAAAWASGAGSPAGRVERGGWMSSGGXXXEGXXXXXSRKRRRPGSPPGEGSRK------------ASPNSADGSTSSAVREMVWSYGFPLARVIAAHDLVGESVEDMLVLLTSDAFQPPENGD 349
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A1E7F9N9_9STRA (Deubiquitinating enzyme A (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9N9_9STRA)
HSP 1 Score: 221 bits (562), Expect = 4.620e-60
Identity = 102/174 (58.62%), Postives = 134/174 (77.01%), Query Frame = 1
Query: 2362 FEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVS-EAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAESCSSAHQV 2880
F L+ +G E+R Q+GDGNCLFRAIS +YGDP MHGD+R+QC+D M +++H+SQFV+ E F YV+R +DGVHGNNPE+QA SELFNRPIEV+ PE G+ P+NIFH Y++G+ PIR+SYH GNHYNAVIDP + G GLG+PGL A+K + +A+AES ++A Q+
Sbjct: 5 FRMALKKRGLEIREQDGDGNCLFRAISLQVYGDPNMHGDVRKQCMDHMEHDQEHFSQFVTGEPFLQYVARTRQDGVHGNNPEIQACSELFNRPIEVFTPENGSSPLNIFHAEYKNGDVPIRLSYHDGNHYNAVIDPLMPTAGLGLGLPGLKPGLADKMQMAKAVAESDAAADQM 178
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A7S0GHB3_9STRA (Deubiquitinating enzyme A n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHB3_9STRA)
HSP 1 Score: 208 bits (530), Expect = 1.310e-56
Identity = 98/167 (58.68%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 2362 FEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVS-EAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
FE EL+ G EL QEGDGNCLFRA+S ++GD H ++RR+CLDFM++E HYSQFV+ E F Y+ RK ++GVHGNNPE+QA SEL+NRP+EVYVPE G P+NIFH Y + + PIR+SYH GNHYNAVIDP + G GLG+PGL A+ +K+A+ ES
Sbjct: 70 FEKELKKNGLELVIQEGDGNCLFRAVSLQVFGDSNNHTEVRRRCLDFMKREEAHYSQFVTGEQFCDYIERKSRNGVHGNNPEIQAISELYNRPVEVYVPENGPKPLNIFHKEYTTSDVPIRLSYHDGNHYNAVIDPYRPTAGLGLGLPGLQPGLADDMQMKKAVNES 236
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A7S1ZCV0_TRICV (Deubiquitinating enzyme A n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZCV0_TRICV)
HSP 1 Score: 214 bits (546), Expect = 3.540e-56
Identity = 95/167 (56.89%), Postives = 128/167 (76.65%), Query Frame = 1
Query: 2362 FEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVS-EAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
FE L+ +G ELR Q+GDGNCLFRA+S +YGDP MHG++R++CLDFM K+ H++ F++ E F Y+ RK +DGVHGNNPE+QA SELFNRP+EV+VPE G P+NIFH Y++ + PIR+SYH GNHYNAV+DP + + G GLG+PGL A++ +++A ES
Sbjct: 157 FEEALKGRGLELREQDGDGNCLFRAVSLQVYGDPNMHGEVRKRCLDFMAKDEAHFAHFITDEPFRDYIRRKRRDGVHGNNPEIQAISELFNRPVEVFVPENGPNPLNIFHAEYKTSDVPIRLSYHDGNHYNAVVDPLKPTAGLGLGLPGLDPGLADRLQMEKAKEES 323
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A7S2K5T8_9STRA (Deubiquitinating enzyme A n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5T8_9STRA)
HSP 1 Score: 211 bits (536), Expect = 1.290e-55
Identity = 96/169 (56.80%), Postives = 129/169 (76.33%), Query Frame = 1
Query: 2359 AFEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFV-SEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKG-TVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
AFE L+ + EL+ EGDGNCLFRA+S +YGD MH ++RR+C+DFM+ E +H+++F+ E F+ Y+ RK +DGVHGNNPE+QA SEL+NRP+EVYVP+ G PINIFH Y++ +AP+R+SYH GNHYNA+IDP + G GLG+PGL A+K +K+ALAES
Sbjct: 149 AFETSLKRRNLELQLVEGDGNCLFRAVSLQVYGDTNMHNEVRRRCMDFMQGESEHFAKFIPDENFEHYIHRKRRDGVHGNNPEIQAISELYNRPVEVYVPDNGGKAPINIFHAEYKTADAPVRLSYHDGNHYNAIIDPYMPTAGLGLGLPGLKPGLADKMQMKKALAES 317
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A7S0CHZ9_9STRA (Deubiquitinating enzyme A n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHZ9_9STRA)
HSP 1 Score: 208 bits (530), Expect = 6.910e-55
Identity = 98/167 (58.68%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 2362 FEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVS-EAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
FE EL+ G EL QEGDGNCLFRA+S ++GD H ++RR+CLDFM++E HYSQFV+ E F Y+ RK ++GVHGNNPE+QA SEL+NRP+EVYVPE G P+NIFH Y + + PIR+SYH GNHYNAVIDP + G GLG+PGL A+ +K+A+ ES
Sbjct: 70 FEKELKKNGLELVIQEGDGNCLFRAVSLQVFGDSNNHTEVRRRCLDFMKREEAHYSQFVTGEQFCDYIERKSRNGVHGNNPEIQAISELYNRPVEVYVPENGPKPLNIFHKEYTTSDVPIRLSYHDGNHYNAVIDPYRPTAGLGLGLPGLQPGLADDMQMKKAVNES 236
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A7S2XJX5_9STRA (Deubiquitinating enzyme A n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJX5_9STRA)
HSP 1 Score: 211 bits (537), Expect = 2.220e-53
Identity = 99/167 (59.28%), Postives = 126/167 (75.45%), Query Frame = 1
Query: 2362 FEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQF-VSEAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
FEA L+ +G EL Q+GDGNCLFRA+S +YGD GMHGD+R+ CLDFM K+ H+SQF V E F Y+ RK ++G+HGNNPE+QA SELFNRP+EV+VPE G PINIFH Y++ + PIR+SYH GNHYNAVIDP + G GLG+PGL A++ +++A ES
Sbjct: 330 FEAALQKRGLELVEQDGDGNCLFRAVSLQVYGDAGMHGDVRKSCLDFMAKDEAHFSQFLVDENFWDYICRKRENGIHGNNPEIQAISELFNRPVEVFVPENGAEPINIFHEEYKTADVPIRLSYHDGNHYNAVIDPLCPTAGLGLGLPGLEPGLADRLQVEKAKRES 496
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
A0A7S4MQ37_9STRA (Deubiquitinating enzyme A n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQ37_9STRA)
HSP 1 Score: 209 bits (531), Expect = 1.810e-52
Identity = 98/183 (53.55%), Postives = 128/183 (69.95%), Query Frame = 1
Query: 2314 VTPTGRLSVEDETERAFEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVS-EAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
VT G + FE L+ +G E+ QEGDGNCLFRA+S +YGD H ++RR+CLDFM ++ HYSQF++ E F Y+ RK DG+HGNNPE+QA SEL+NRP+EV+VP+ G PINIFH Y++ +APIR+SYH GNHYNAV+DP + G GLG+PGL A++ L+RA ES
Sbjct: 351 VTSRGPAGSYSSCQTDFEEALKKRGLEMAEQEGDGNCLFRAVSLQVYGDANNHREVRRRCLDFMARDEPHYSQFITDEPFREYIKRKRVDGIHGNNPEIQAISELYNRPVEVFVPDSGAKPINIFHAEYKTADAPIRLSYHDGNHYNAVVDPLLPTAGLGLGLPGLEPGLADRLQLERAKEES 533
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Match:
B7G121_PHATC (Deubiquitinating enzyme A n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G121_PHATC)
HSP 1 Score: 203 bits (517), Expect = 6.140e-52
Identity = 93/170 (54.71%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 2353 ERAFEAELRAKGWELRRQEGDGNCLFRAISQHIYGDPGMHGDIRRQCLDFMRKERDHYSQFVS-EAFDSYVSRKEKDGVHGNNPEMQAASELFNRPIEVYVPEKGTVPINIFHGGYRSGNAPIRVSYHGGNHYNAVIDPEEASVGQGLGIPGLSKEAAEKESLKRALAES 2859
+ AF L+++G E+ Q GDGNCLFRA+S +YGD M+ +R +CLDFM + +H+S FV+ EAF +Y+ RK +DGVHGNNPE+QA SEL+NRP+EV+ P+ G P+NIFH Y++G+ PIR+SYH GNHYNAVIDP + G GLG+PGL A+K + +A+AES
Sbjct: 202 DEAFSQALKSRGLEIIEQAGDGNCLFRAVSIQVYGDSQMYDQVRSRCLDFMAADPEHFSPFVTGEAFHAYIDRKRQDGVHGNNPELQAISELYNRPVEVFTPDTGAKPLNIFHAEYKTGDTPIRLSYHDGNHYNAVIDPLVPTAGLGLGLPGLQPGLADKMQVAKAMAES 371
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17019.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.28e-167 / Id = 62.60 Expect = 2.12e-140 / Id = 67.77 Expect = 4.62e-60 / Id = 58.62 Expect = 1.31e-56 / Id = 58.68 Expect = 3.54e-56 / Id = 56.89 Expect = 1.29e-55 / Id = 56.80 Expect = 6.91e-55 / Id = 58.68 Expect = 2.22e-53 / Id = 59.28 Expect = 1.81e-52 / Id = 53.55 Expect = 6.14e-52 / Id = 54.71 Sequence A0A6H5JLC1_9PHAE D7G475_ECTSI A0A1E7F9N9_9STRA A0A7S0GHB3_9STRA A0A7S1ZCV0_TRICV A0A7S2K5T8_9STRA A0A7S0CHZ9_9STRA A0A7S2XJX5_9STRA A0A7S4MQ37_9STRA B7G121_PHATC Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 452.6 Seed ortholog evalue 2.8e-124 Seed eggNOG ortholog 2880.D7G475 Preferred name OTUD5 KEGG ko ko:K12611,ko:K12655 KEGG Pathway ko03018,ko04622,map03018,map04622 KEGG Module M00395 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0001775,GO:0001816,GO:0001817,GO:0001818,GO:0002237,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002286,GO:0002287,GO:0002292,GO:0002293,GO:0002294,GO:0002295,GO:0002360,GO:0002363,GO:0002366,GO:0002376,GO:0002460,GO:0002520,GO:0002521,GO:0002682,GO:0002790,GO:0002791,GO:0002792,GO:0002819,GO:0002822,GO:0003006,GO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006955,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009306,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009987,GO:0010033,GO:0010498,GO:0015031,GO:0015833,GO:0016579,GO:0016787,GO:0019538,GO:0019783,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030097,GO:0030098,GO:0030154,GO:0030163,GO:0030217,GO:0031647,GO:0032479,GO:0032480,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032625,GO:0032638,GO:0032660,GO:0032700,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0033993,GO:0035710,GO:0036037,GO:0036211,GO:0036459,GO:0042093,GO:0042110,GO:0042221,GO:0042886,GO:0043161,GO:0043170,GO:0043207,GO:0043367,GO:0043368,GO:0043369,GO:0043373,GO:0043374,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045058,GO:0045165,GO:0045184,GO:0045321,GO:0046631,GO:0046632,GO:0046649,GO:0046903,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050663,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050776,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051241,GO:0051603,GO:0051704,GO:0051707,GO:0061578,GO:0065007,GO:0065008,GO:0070011,GO:0070201,GO:0070536,GO:0070646,GO:0070647,GO:0071108,GO:0071702,GO:0071704,GO:0071705,GO:0072538,GO:0072539,GO:0072540,GO:0072607,GO:0072619,GO:0090087,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1903530,GO:1903531,GO:1904950,GO:1905076,GO:1905077,GO:1990380,GO:2000316 EggNOG free text desc. thiol-dependent ubiquitin-specific protease activity EggNOG OGs KOG2605@1,KOG2605@2759 Ec32 ortholog description Ovarian tumour, otubain Ec32 ortholog Ec-02_001560.1 EC 3.4.19.12 COG Functional cat. G Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01002,ko03019,ko04121 Exons 11 Model size 4777 Cds size 1785 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930820.325006-UTR-C-linearis_contig96:76110..76868 1622930820.325006-UTR-C-linearis_contig96:76110..76868 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 76111..76868 + 1690881266.620495-UTR-C-linearis_contig96:76110..76868 1690881266.620495-UTR-C-linearis_contig96:76110..76868 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 76111..76868 + 1622930820.3381426-UTR-C-linearis_contig96:76885..78014 1622930820.3381426-UTR-C-linearis_contig96:76885..78014 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 76886..78014 + 1690881266.6320999-UTR-C-linearis_contig96:76885..78014 1690881266.6320999-UTR-C-linearis_contig96:76885..78014 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 76886..78014 + 1622930820.5712073-UTR-C-linearis_contig96:83497..84602 1622930820.5712073-UTR-C-linearis_contig96:83497..84602 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 83498..84602 + 1690881266.746087-UTR-C-linearis_contig96:83497..84602 1690881266.746087-UTR-C-linearis_contig96:83497..84602 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 83498..84602 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930820.356783-CDS-C-linearis_contig96:78014..78391 1622930820.356783-CDS-C-linearis_contig96:78014..78391 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 78015..78391 + 1690881266.641984-CDS-C-linearis_contig96:78014..78391 1690881266.641984-CDS-C-linearis_contig96:78014..78391 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 78015..78391 + 1622930820.380172-CDS-C-linearis_contig96:79066..79169 1622930820.380172-CDS-C-linearis_contig96:79066..79169 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 79067..79169 + 1690881266.6505892-CDS-C-linearis_contig96:79066..79169 1690881266.6505892-CDS-C-linearis_contig96:79066..79169 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 79067..79169 + 1622930820.396788-CDS-C-linearis_contig96:79803..79900 1622930820.396788-CDS-C-linearis_contig96:79803..79900 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 79804..79900 + 1690881266.6591766-CDS-C-linearis_contig96:79803..79900 1690881266.6591766-CDS-C-linearis_contig96:79803..79900 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 79804..79900 + 1622930820.4172006-CDS-C-linearis_contig96:80186..80233 1622930820.4172006-CDS-C-linearis_contig96:80186..80233 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 80187..80233 + 1690881266.6686113-CDS-C-linearis_contig96:80186..80233 1690881266.6686113-CDS-C-linearis_contig96:80186..80233 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 80187..80233 + 1622930820.4390988-CDS-C-linearis_contig96:80578..80732 1622930820.4390988-CDS-C-linearis_contig96:80578..80732 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 80579..80732 + 1690881266.6776817-CDS-C-linearis_contig96:80578..80732 1690881266.6776817-CDS-C-linearis_contig96:80578..80732 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 80579..80732 + 1622930820.4670582-CDS-C-linearis_contig96:80967..81089 1622930820.4670582-CDS-C-linearis_contig96:80967..81089 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 80968..81089 + 1690881266.6867824-CDS-C-linearis_contig96:80967..81089 1690881266.6867824-CDS-C-linearis_contig96:80967..81089 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 80968..81089 + 1622930820.4868174-CDS-C-linearis_contig96:81380..81665 1622930820.4868174-CDS-C-linearis_contig96:81380..81665 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 81381..81665 + 1690881266.6973846-CDS-C-linearis_contig96:81380..81665 1690881266.6973846-CDS-C-linearis_contig96:81380..81665 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 81381..81665 + 1622930820.5079908-CDS-C-linearis_contig96:82068..82446 1622930820.5079908-CDS-C-linearis_contig96:82068..82446 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 82069..82446 + 1690881266.7106395-CDS-C-linearis_contig96:82068..82446 1690881266.7106395-CDS-C-linearis_contig96:82068..82446 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 82069..82446 + 1622930820.5268178-CDS-C-linearis_contig96:82884..82976 1622930820.5268178-CDS-C-linearis_contig96:82884..82976 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 82885..82976 + 1690881266.7216954-CDS-C-linearis_contig96:82884..82976 1690881266.7216954-CDS-C-linearis_contig96:82884..82976 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 82885..82976 + 1622930820.5497603-CDS-C-linearis_contig96:83367..83497 1622930820.5497603-CDS-C-linearis_contig96:83367..83497 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 83368..83497 + 1690881266.7323718-CDS-C-linearis_contig96:83367..83497 1690881266.7323718-CDS-C-linearis_contig96:83367..83497 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 83368..83497 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17019.1
>prot_C-linearis_contig96.17019.1 ID=prot_C-linearis_contig96.17019.1|Name=mRNA_C-linearis_contig96.17019.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=595bp
MRVLLPDGEEKGPADSRFTPPATTENTNSAAGLAQQQQQHLPGRSSTLLA back to top mRNA from alignment at C-linearis_contig96:76111..84602+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17019.1 ID=mRNA_C-linearis_contig96.17019.1|Name=mRNA_C-linearis_contig96.17019.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8492bp|location=Sequence derived from alignment at C-linearis_contig96:76111..84602+ (Chordaria linearis ClinC8C monoicous)CGACGAAATAAGCCTCAAAACAACAAAACGACGAGCATGCTACGGATGAC
TTCTGGTCAGTGGAGGTCAGGGACTAGGCTACCTTGTAGTACATACCTGG
CCGAGCCTCCTATGCCGAGAGCTCTCCAAGAGGCGACCGTCTTCTTCGCT
CCCAGGAACACAAGATCGGCCATACATTTTCGCGGAACGTCAAACTCGGA
CGAGGAGTTGAAATCCCATTTGGACCTCAGGCGAGACAGGGACGCTTGCC
GCACGGTATCCTACGCCGAAGACAGGCAACGAAACTACTTGGTCAGACTT
TCATCAATCAACAGCCGCGCAAAAGGCCCGAGGAACCAACTCCCCGCGCA
CGTGTCCCGTGAGACGCCCGTTTAAACCTAGAAGGTAGTACCAAGGGTTT
CATACGGCACTCACGTTGCGGTGGTGTAATCCCGCACGAATGAAGTACAC
GACGCCTTGGTCAACTGTTATCCTTTGTCACGCGCACAACGGCCCTTCCC
CTTGGAGGCATCCATTTCTCCCCAAAGCATGTCTCTGCCATGAAAACCCT
GACACTGCTGTTGTGTATTTGGTAGGACGTTTCTCTTCCCATTCACCGCA
CCACACGCGACACCGCAGAATACCTGACCTGCAAGAGCTTGAAGGAGGCC
CACTCGTCACTCCAGTCGGTAGCGAGAACTGCCAGGACAGCTGGCGTGTG
AAGGTGGGTCCTCCCGCTTCCGACGATGGACATCACCACGCCGAGACGAG
CTCTCTGG GCGAAGAATGTGGCCAGACACGAAAAGCTGTGTTGGTTTAAG
GTTTTATGGGCATGCGTGTAGTGCGACACAAAGTAGCGTTCCCTACGAAA
GATATTAGACACGGGCGCTGCTTCCAGAGTGTTACCTTTGTCAGAGACTG
CAAGGGTTGAGTTGAGAGGAGATTCGAAACCGTAGTTTCGAAAATCTCGA
CCCATCGATCCAGGTCGAGGGGGTCCACCAGCTTCGCCTGGTAAATGATC
CACAGGCCCTCTAAATCGTGTCGCACCTGTAACCGGCATCGGATTCCGTA
GGGCAAGAAGCGCGTGATATGAACAGCACAAAGACGTTTCGTCGACAGCA
CCATCGGGTCTCCCCTGAATGACACACCCACATCTTGCGTCCAACATCGA
CGTACCTACGCACATATCCACACCCAAACCTGCTTTGTTTGCTTCATGGC
TTGAAGAGGCGGAAAATGCACAGTCGTGTGTGGGCATATCGCAGAGAGCT
GCTGCTGTTTGTGATTCCTCCAAATTCCGCGTACAGGATTGTCCGTAAAT
ACGAACAATAGGACCGTTCGATTTGCTGCAGCATGTTTCGCACGAGCGCG
TGACTACCACTACTGGTTGATGAAGAGTGTCAAAGGAGTCTTTCAAACAC
CTGCACCAGAACCCCCACCACACGCGACTCTCCCATTCTCGTAGAAAACG
CACCGTTCTGCAAAACATAACATAACTCGCCCAAGTTCAAATCTGCAATG
GCGGGCGAATCGAAAAGAAGCAAACTACAAGGAGAAACTGCTGCGTTAGC
ACCCACACCTGCTTGGTCTTCGCCTTGGTCGGCCTGAAGTAAAGTCCATC
TCCTCCCGGCTGCACTCGACCTCCAGTCACCTCCATGTCAAAGATGAAGC
AAGGGGTTGGACGCCAAGGGTGTGGTTGTCGGCTGCCCAACCGCGGAGTG
GTTTCCTTGGCCGATGCAGAGGGGGGGGCTCAGACCAGATGAAACCGCCA
TTTTTCCGAGGTGGGGGGTCTATCATCGGGGCCAATAAAAAATTGGCGTT
CGTTCCCTCTTTTCGTCATCTTTTAATCAACTCTCCTCTCTCTCTCTTCT
CTCTGCCTGGTCGTGAGCGCTTAACCTGTCTGACCTGCGGGCTCGTATAG
TATC ATGAGGGTCCTACTCCCTGATGGTGAAGAGAAGGGTCCCGCGGACT
CCCGGTTCACCCCGCCCGCAACAACAGAAAATACGAATAGCGCGGCGGGT
TTAGCTCAGCAGCAGCAACAGCACCTCCCGGGCCGAAGTTCCACGCTTCT
CGCGAGAGCACCGCCGGCAGAAGCGCCACCAGACCGCCAGGCTAGCGCAA
CGAACGGTAAGCAACGCCCTTCTAATGCGGCAAGGCCGGGTGTTTCAGAA
CCGTCGACGGAAAATGATGTCGGCGTGGAAGGGGAAGTGAAAGATGATGA
GCGTGACGTGGATGCCACTACTGCTACAACTGCTCCTGAAGGCAAGCGGG
CGGCGGCAGGAACCTCTGCCTGTGACGTCTC GTGAGTTTATGGCGTGTAT
GCGCACAGGCCTAAATTTTATTACGGCGAGAGACAAGTGGTACTGTAAGC
GTACTTGTAAGATAAACAAAGTTGTGTTACTTTTTACTCTCTTTTCGGCG
CACCAGCGGGACAACTACTCTGTACTACATCCTCCGTTCTCGAGGGTGCC
CTCTTCGACAGGTGCGGTGTAGCCTCTTTTTCTTGACGCACAAAAATAAA
AAATCCAACCTCAACCACTGTTGTCGCACTTGTAAATCGGCGCGCTGAAC
GAAGTCCAACACACGATGGAATGCGTCACTTTGTTTTGTGCGAGCCATTC
TCGATGTGTACAATGACGTCCGTACTTGCGTACGTGTTCGCTGCCCACGA
CTGGCAAATTAGTAGCCAACAACAACATACATAGTCAGATGTGCGAGTGC
TTGGCGAAGTGTGTATGCTTTTTGTGGCCGTTTAATTTAATCCCGCTGGC
CTGGGCCGAGCAGTACAAGGTTACCAGATGCCCAGGTTGTTTCGGTGCGA
CGACGAAAGCTTGAGCTTGTCCCACCACTGGAACATTGGTATCTGCTTCG
TAGAGTGCTGGAGGTTATACATCCACATGGGACACGTAGAATGTCACCTC
CGTTTGGTCGCTTGGCAAAGTCGCTTAATTTCTGCGTTCAATTCTCCCAA
CCGCAGCAGGGCCGCTGGCATCTCCAGCACAAGCAGAGGTGGGAGTGGAT
CGGGGGTTACCCCGACAGGTCGACTTTCGGTTGAAGACGAGACCGAGAGA
GCCTTCGAG GTGCCTGCAGAATAATCTAGCTACAGTTTTGTGATGGCGAG
CAACGTTCGGTTTTGTTGAATTCGTTATTTTCTCAGCCTTCATGTTAATA
GTCTAGACCGCAGTCTTCCTCCTGGCCGATGATCCTCTGTGAAGGAAAAG
TCCATCCGCAGGAGCAAGCGGACATATGCAGGTACAGCAGTAGTAGCGTG
CGTTCGTCTCGGTCCACTCCAATTTCGCATTTTTTCAGTTTCCATTTATT
TTCTCGTCTTTCGCGGGGCGAGGCGGTCTCCTTAGAGACCTCCGTTTTCG
GTGTATCATACAAGTACGATCCACACCCAAGTTTATTTGCTGAGCAACAA
GAGCAATCAGTTGGGTGTTTTGAGAACCTATGACGATTCGCGTTTTCGGT
TCACGAAACCTCGAGAACTGCCGCATTTCCCAAACATCACAACACATTCT
CCAGCAGAGTGCACCTTGACCTCTTTGCTTGGATTGAAATCGGCCGTTTT
GTGCCATATAACGTTCCTTCACGTGCCAGCGATACCTATATGTATTGGCT
TCAAATATGTATCTTCTTTCCCGACGCTATCTACCTCGTCATTTATTCTT
TTCGTTTCCACTTTTTCCTCTCTCGTGTTCATACGCTTTATAGGCTGAGC
TGCGGGCCAAGGGCTGGGAGCTGCGAAGGCAGGAAGGAGACGGAAACTGC
CTATTTCGAGCGATTAGTCAGCACATCTACGGAGACCCTG GTGAGTCAAC
CACCCGAACAAGAGGTGCTCCTCACTCGCGTTGTCATGGTTTCCCCTCAT
GAAACGAGTATGTGTTGTGTGTGTGGTTGTTTCTGTGTGCTGATGGGGAG
GACAAAGGGCAAAAGCATTTTTCGCTGAGAGAACTGCGGGAAGTTGGATT
GTTGGACCTTTGCAGAACAATGTAGAAACCTGTTTCTGCCGACTGACCGA
CCTGACATTTTTGTAATAATCCCGCCCCTCATTTCCTCTTGTTTCCTCTT
CGCTCCCGACGTGGTCAATCTTTCAGGCATGCACGGCGATATCCGACGAC
AGTGCCTAGATTTCATGCGCAAG GTGCCGTGAGAAGTTGGATCGATGGCT
TCGAATCTCTTGACTGGATGGAAGTTGTCGTGCATGCAATACCTTCACTG
ATTTCACTGCCACTTGAGAGCTTCGATCATCTTAGCCTCTTGGGGTAATT
TTTCGGAAAGGTAGTTTGCACATACATACAATATATCATGGGGTTTAATC
TAAACCCGCGAAATACCACAGCACCAACATCCACATGGAAAAATTGATCG
AACGGACAGCACAACGGTGGCCTAAGCTAGAGGTACCGTTCGAATACTGG
TTTTGTACGTAAGTGTCCTGATGGATATGACGACCCCACGGGCGACTATT
ATCGCTTTGGTTGCGCAGGAGCGAGACCACTACTCTCAATTTGTGTCGGA
GGCGTTTGACAGCTACGTCAGCCGTAAGGAAAAGGACGGCGTGCACGGAA
ACAACCCTGAGATGCAGGCTGCCAGCGAGCTGTTCAACCGCCCCATCGAA
GTCTATGTGCCCGAGAAAGGAA GTGAGTGTACTGGATGCAGATTGTCCAT
ACTTTTTCGACGGATTCGTAGAAATGAATACCGTGCGATGCCATAGGTGT
GGGCGCTCTGAATACAATGTGGCCGGCAGTAAGTGATGTTACGCTGTCTG
GTTGTACCAAATTATCACTTTAGATGATACCCAACAAGCCCCGTAGTATC
AGCATGCACTCAAAGCTTCTCCTCCGTGTCTATTCTCCCCTGGTTGTTCG
CGAACAGCTGTACCGATTAATATCTTTCACGGAGGATACCGATCGGGTAA
TGCTCCCATTCGCGTGAGCTACCACGGAGGAAACCACTACAACGCAGTCA
TCGACCCCGAGGAGGCCAGCGTCGGGCAG GTGTGGCTATGATGCAAAGTC
TTGATGAAGTGTACTTTTCGACTGGTGTCTGCAGCAGCTCGCGCAAGTAC
CGTAAGAGGGGCCGCAAGGTGTCGATATGGGTAAAAGTTGTCTGCCAAAA
ACACGAAAGATCCACATCGATCCTTGACCGCACACAGAGACCTTTGTGGA
TCCTTGCGTGTTTTCGTGTTGGATATTTTAGTAATTTCTCGTATAACGCA
TGCCCGCCCTCATGTTAAACGAGATCGCCTTGCCGTTCACCTACTTGACC
CGTCTCTACCTGATTGCTAGGGTCTCGGTATCCCTGGACTTTCGAAAGAG
GCCGCGGAAAAGGAGTCCCTGAAGCGTGCGCTGGCGGAGTCGTGTTCGTC
TGCTCATCAAGTCTTCCCTGGTGAATCGTCGGCCTTCTTCAAAGGGGGGC
GGGGAGAGCGTGACTCATTTGGGACCGACTTCGGGGATTCTGACTTGCAG
CGTGCGCTGGCGGAATCATGTTCGTCTGCTCACCAAGTCTTTCCGGGTGA
ATCGCCGGCCTTCTTGAAAGGGGGGCGGGCAACCCAGGAAGAACTGGAGC
AGGCG GTGAGGACGAAGGGTTTCGATGTTTTTGATGATGTTGCTTCCTCG
GTCGTTGTCGATTGGTGTGATTGGTGTGATGTGTTTAGGAGCTGAAGGAG
CGGGTGGGTGGTGATGGAAAGTGATGGAAAGCTCCGGTTGGCTCTTGTCT
CGCGGGGAAGCTCGTGTGCTGTTGCAAGCTTTCTCGTTTGTTGCGTGTGT
CTTTGAAGCGGGCCAACACGCGGCCGTTGTATCTCGCATTGGGGATCTTG
GAGCACCCAAGATGGCGCGTACCCGCTCTGATGGTTGTCACCTCCTAGTG
CATTCGATAAGTGGTGTCCTCTTGCGTACATGGTGTGGACGTGCTCCCTA
GACCCTGACCACTCATGAAGTCTAATAAAGCTGCTCTGCCCCCCTATTTG
CACAACAGGCCATCACGGCCTCCTTTGCCGAGTTTCATGGCACGAGCGGC
AGCGGCGGCGGAAGCAGCAGCAGCGACAAGGGTGCTAGCGCTTTTCCCCT
CCCTCGTCGGGGTGGGAGAGGTGTCGGGATTCCCAGTGGTGGGAGGTTTG
TGGCGCGTGGAGCCGACAGAGGCTCAGTAGGTCGTGGAGAACGGAGAGGG
GGGGGTGCTGCAGTTTCACCTGTGGGAATTGGCAGTGGTGCAGGCAGGGC
GGAGGGTGGAGGGTGGAGCAGTAGAGGAGGAGGAGAAGGAGGAGGGAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGGATCATCCGCTCGT
AAACGGCGGCGGACTGGAAGTCCACCCGGAAGTTCG GTGAGTTCTTGTAT
GGATGCTGGATTGTCCATCGATGTTCAGCGGGGTGCGTTCTTGGCGGGAT
GACGTCAATGAGAAGTGACAACGGACTCACCGTCTTTCGGCTGAAGGTTA
ACGTAGCGCCACGCAATGACACACGTATGACAGAGGCGAAGCCTGCGTAT
CGAAGAGGCCGGCCCCGCTTTGTCTCTATGGCCTCCTGCAGCACGTGTTG
AAGGATGTCTTACTTTTGCGGTGTCCAAGCGCGATTGAAAGCGCGGTCGT
CGACGATCGTAGAGGTCCTTTTTGCAGGTTCGATATTTGTCTTTCCTACG
ACAAGCCCCAAGCGCAGTTATATCAACCACAAGAACGCCTGGACGCACTT
TATCGTCTTTCTCCTCCCACTCATCAACTTTCATCTGCCCAATTGTATCC
GGCCCTTATTTGCTCTGCCAACAGTCCCAGCGGAAAGTGTCGCCTAGCTC
TGCAGATAGCTCCACAAGCAGCGCCGTGAGAGAGATGGTTTGGTCTTATG
GCTTCCCACTCGCCAG GTATTCGCTCTTTAGCTCTTCACTCAGCGCTGAA
TTGTTATTTAGGTGACAGATGCGCGTTAGGTTCGGCTCGCGTGTTTCGTC
TCGCATCTTACGGTGCAAACGTTGATTTCCTCTTGTACGCAGGCCTGGCA
CGAGCGCTTGCTCTTGATGCCAGAAGCTCTCAGGGGGGGATATTGCAAAG
GGGCAGCTAACCTTTTTTGCGGTATCGTTTTGATCGAAATGCTTGTTCTT
TGTGCGAAGGCTTCCCGTTTTCTAGATTTACAAGTGACCTCGCTGCAGCG
TGTGATCCATGCTGTCGAAAATGATACTCGCAATATTTGCGAGAAGCGCC
TTGACCCGCCCCGCCCTACCCCGGTCCATCCCGTCCCATCGCTTGGATCT
CGTTCAGAGTTCTGCACGCTCACGACCTGGTAGGCGAGTCGGTAGAAGAC
ATGCTGGTTTTGCTCACGTCGGACGCCTTTCAGCCACCAGAAGCCGGTGA
TAGTGGCGCAACCGCTGCGTCCTTCAGCAGCGGGTGA ATGTCAACCAAAT
GATTTGTGCAGAGTAATAAAACTGAAGGGAAAGAAAGTCGTGCGACACTT
TCGACTCACTCTCATAGTATTCCGGACGTTGCACACACGTTGGTTGATAT
AGCCAAGTGCTGTGCCGCCACGTCCATGGCGGTTGATACCATTCGCCCAC
GCCTGGTGGAAGCTATCGTTTTCGTTCGTTAGTAGTTTGTGGTGATGTGT
TTCGTGTTTTTCCGGCGTTGAACGCCGGATTTTTTCTGTGTGTTTTCAAG
AGGGTTTCCGAACAGCCTTCAGATGTATACGGGCAATGGAGATGTTTGGG
TCGGCGACCATCTCATGGACGTCGGTCTGGTAGCAGTCTCACAAGCACGC
GCTCTTGCGAGAACCTATGGGAGATTTGTGTCTTGGATTGCTCGACGCTT
TGGCTTCTTTGTCCTCCGTTCCATTTCTGTGTGTATAATTTCTCCAACAC
ATAGGTAAAGTCGGTTATGGGGCACAGATCACATATTTTGAACGGACGAG
TGTACAACGCTATAGGTTCTTTGGAAAGATACAGTCACGGAGATGCTCAT
GAAAAAAAAGAAAAAATCCGAGTTCTCGTTGTCGAGAATATATAGGTCAA
AAATACCCCTATTTTGGCCGATATCGACCAGTTTGTTTTGTTTTTGGCCG
ATTCTTGACGATTTTTGCCTGTTTTCGGTATACACATCCAGACTAGCCAG
CCACGTGATGCCATGCTTTCAGACGAGGCATAGGTATAGTTCAGCAATGA
TGAAGCGAAAGCGAAAAGCTATTGTTGAATATATTCTTGCGTTTTTTGCC
ATTTTTCGAGTTTCCAAATGTAATGTTTCCCCTTTTTGCCGGAAAAGGGG
ACGAAACACGGCGTTTTTTGGCCGACTTGATATTTTTCGGCCACTGGTAG
ATACATGCAGGAGGCTGCACAAAAAACAAAAAAAAACGTTTTTCAACTCG
AAAAATGACAAAGATTTCAAAACTACCATCACTTTTGGCATCGGACACGG
CTAAGGGCCCGTGTAGACTATACGTAACTGACTTTCTTATGTGTTGGAGG
GAGTAGTAGATTATGTCAAGGGCTTTCGGTTGTTGGAACGCA back to top Coding sequence (CDS) from alignment at C-linearis_contig96:76111..84602+
>mRNA_C-linearis_contig96.17019.1 ID=mRNA_C-linearis_contig96.17019.1|Name=mRNA_C-linearis_contig96.17019.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3570bp|location=Sequence derived from alignment at C-linearis_contig96:76111..84602+ (Chordaria linearis ClinC8C monoicous) back to top