Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 252 |
| Cds size | 249 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.506868-CDS-C-linearis_contig96:63661..63729 | 1622930818.506868-CDS-C-linearis_contig96:63661..63729 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 63662..63729 - |
| 1690881265.8521678-CDS-C-linearis_contig96:63661..63729 | 1690881265.8521678-CDS-C-linearis_contig96:63661..63729 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 63662..63729 - |
| 1622930818.5304458-CDS-C-linearis_contig96:64588..64769 | 1622930818.5304458-CDS-C-linearis_contig96:64588..64769 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 64589..64769 - |
| 1690881265.8648646-CDS-C-linearis_contig96:64588..64769 | 1690881265.8648646-CDS-C-linearis_contig96:64588..64769 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 64589..64769 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17016.1 >prot_C-linearis_contig96.17016.1 ID=prot_C-linearis_contig96.17016.1|Name=mRNA_C-linearis_contig96.17016.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=83bp
PLLRKANSRSPCVRAAALCTTPSDLPVGPVNEESAATMSGFRGGGRGGGR
GAPRGGRGGRGGFGGRDGGRGGRGGGRGGARGG back to topmRNA from alignment at C-linearis_contig96:63661..64769- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17016.1 ID=mRNA_C-linearis_contig96.17016.1|Name=mRNA_C-linearis_contig96.17016.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1109bp|location=Sequence derived from alignment at C-linearis_contig96:63661..64769- (Chordaria linearis ClinC8C monoicous)
CCCCTCCTCCGAAAAGCAAACAGCAGAAGTCCGTGCGTCCGTGCTGCTGC
GTTGTGCACAACACCTAGTGACCTACCCGTAGGACCTGTCAACGAGGAAT
CTGCTGCTACTATGTCCGGGTTCAGAGGAGGTGGTAGGGGTGGTGGACGT
GGAGCACCGAGAGGTGGACGTGGTGGAAGAGGTGAGCAGTGTAAAATCAA
CCAGTAATTTTTCTGTCTTCCTCAAAATCTGTGGATATGTGGCTAGGAAA
GGTACCTTTCGTTTGACGACGAGCCAACGCAATTTGGTTGATGGGCTTCA
ACATTGCCGCTGTCTGAGACCAAAGAAAACCTTGCGGATGCGATGGTGGC
GCCCTTTGGATATGTATCATGGTCACCCTCGTTAGACTGTCGGGGATAAA
CAACGAGTTGTCGGCCATCCAAAAACATCCAAAAAGAGCAACCCCACCCC
GCCATCGCGCCAAGGGTGTGTGTGCGTGGGTGGTAAGGGAGCATACGAGC
ATGCACACCAAACCACAACCTGTATAACTCACGAGAGCATGTGGGTGGAA
CCTTGCGGTCCAGGCATTTCAGTGTTTGCTGTGTCCAGGAATGGCGCAGT
TTTGTGGGGGCAAAGCTTTCACTACTACTCTGTACCATGCCGATGGGTAT
CAAAACGAAGTTTGGGTTGAATGGTTGTCATGAGCGACACCCAAGGGGAA
GGGTGGTTTGTGTGTTTTCTTCTAACGACCCGCCTATCGTGTCTACCCCC
CCCCGCTGAATAGTTACTTTTCTGTGAGAGGTATCTACCAACATTTTGCG
AGAAGGCAGGGAATATCAAAGTTCGACGACAATTTCAACCATTTTTTTTT
CTATCCTACAATCTTGTCCTACTTACAATACATCTACATACTGCTGTATC
TGTTTCTTTGCCTGTTTTTGCCATCTGTCACCTCTGCTTGTACACACACA
ACATGCCCACCCCCGGCGCTTTTGAACCCAAGCGCCTTATCCCCCCTAAC
CACTCTTTTATTCTGTTCCTGCTGTTGTTCTTTCAAGCAGGGGGTTTCGG
CGGCCGTGATGGTGGCCGCGGAGGGCGTGGAGGCGGCCGGGGAGGGGCGC
GTGGAGGCG back to topCoding sequence (CDS) from alignment at C-linearis_contig96:63661..64769- >mRNA_C-linearis_contig96.17016.1 ID=mRNA_C-linearis_contig96.17016.1|Name=mRNA_C-linearis_contig96.17016.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at C-linearis_contig96:63661..64769- (Chordaria linearis ClinC8C monoicous)
CCCCTCCTCCGAAAAGCAAACAGCAGAAGTCCGTGCGTCCGTGCTGCTGC
GTTGTGCACAACACCTAGTGACCTACCCGTAGGACCTGTCAACGAGGAAT
CTGCTGCTACTATGTCCGGGTTCAGAGGAGGTGGTAGGGGTGGTGGACGT
GGAGCACCGAGAGGTGGACGTGGTGGAAGAGCCCCTCCTCCGAAAAGCAA
ACAGCAGAAGTCCGTGCGTCCGTGCTGCTGCGTTGTGCACAACACCTAGT
GACCTACCCGTAGGACCTGTCAACGAGGAATCTGCTGCTACTATGTCCGG
GTTCAGAGGAGGTGGTAGGGGTGGTGGACGTGGAGCACCGAGAGGTGGAC
GTGGTGGAAGAGGGGGTTTCGGCGGCCGTGATGGTGGCCGCGGAGGGCGT
GGAGGCGGCCGGGGAGGGGCGCGTGGAGGCGGGGTTTCGGCGGCCGTGAT
GGTGGCCGCGGAGGGCGTGGAGGCGGCCGGGGAGGGGCGCGTGGAGGC back to top
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