Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 188 |
| Cds size | 159 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.3983269-UTR-C-linearis_contig96:49485..49513 | 1622930818.3983269-UTR-C-linearis_contig96:49485..49513 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 49486..49513 - |
| 1690881265.8170176-UTR-C-linearis_contig96:49485..49513 | 1690881265.8170176-UTR-C-linearis_contig96:49485..49513 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig96 49486..49513 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.4280891-CDS-C-linearis_contig96:49513..49519 | 1622930818.4280891-CDS-C-linearis_contig96:49513..49519 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 49514..49519 - |
| 1690881265.8265584-CDS-C-linearis_contig96:49513..49519 | 1690881265.8265584-CDS-C-linearis_contig96:49513..49519 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 49514..49519 - |
| 1622930818.4467695-CDS-C-linearis_contig96:49647..49800 | 1622930818.4467695-CDS-C-linearis_contig96:49647..49800 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 49648..49800 - |
| 1690881265.8355105-CDS-C-linearis_contig96:49647..49800 | 1690881265.8355105-CDS-C-linearis_contig96:49647..49800 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 49648..49800 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17014.1 >prot_C-linearis_contig96.17014.1 ID=prot_C-linearis_contig96.17014.1|Name=mRNA_C-linearis_contig96.17014.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=53bp
PGGGSRRERRRRDKGVKDADAHDIFEGANVGARVTASTAADSAVNHEAQL
RV* back to topmRNA from alignment at C-linearis_contig96:49486..49800- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17014.1 ID=mRNA_C-linearis_contig96.17014.1|Name=mRNA_C-linearis_contig96.17014.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=315bp|location=Sequence derived from alignment at C-linearis_contig96:49486..49800- (Chordaria linearis ClinC8C monoicous)
CCGGGCGGAGGCAGCAGGAGGGAGCGGCGAAGGAGAGACAAGGGCGTGAA
GGACGCCGATGCCCACGACATATTCGAAGGGGCCAATGTCGGCGCCCGGG
TCACGGCCTCCACCGCCGCCGACTCTGCGGTGAACCATGAAGCGCAACTC
AGGGTGAGGGGGAAGGCAGCGTGAGTGAAGCCCAAGAGCACTGGCAGGTT
GTTTCGTTTGTGGTTTCAACCACTTGACATCCTATAACCTAGCCCCGGCC
TCCGTTCTACCCATCATGTTGTCCGCCGCAGGTCTAGCCAAGCCGGGCAT
TCTTTCGCTAGCCAG back to topCoding sequence (CDS) from alignment at C-linearis_contig96:49486..49800- >mRNA_C-linearis_contig96.17014.1 ID=mRNA_C-linearis_contig96.17014.1|Name=mRNA_C-linearis_contig96.17014.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=318bp|location=Sequence derived from alignment at C-linearis_contig96:49486..49800- (Chordaria linearis ClinC8C monoicous)
CCGGGCGGAGGCAGCAGGAGGGAGCGGCGAAGGAGAGACAAGGGCGTGAA
GGACGCCGATGCCCACGACATATTCGAAGGGGCCAATGTCGGCGCCCGGG
TCACGGCCTCCACCGCCGCCGACTCTGCGGTGAACCATGAAGCGCAACTC
AGGCCGGGCGGAGGCAGCAGGAGGGAGCGGCGAAGGAGAGACAAGGGCGT
GAAGGACGCCGATGCCCACGACATATTCGAAGGGGCCAATGTCGGCGCCC
GGGTCACGGCCTCCACCGCCGCCGACTCTGCGGTGAACCATGAAGCGCAA
CTCAGGGTCTAGGTCTAG back to top
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