Homology
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)
HSP 1 Score: 251 bits (642), Expect = 4.800e-76
Identity = 137/156 (87.82%), Postives = 142/156 (91.03%), Query Frame = 1
Query: 13 AAARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEARGVDGTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPLL 480
A A GSVERTVA+LS+GSVDIDGGYGD GRTPLMAA TMGYLRVVRVLLRLG RVSVADN GATALHLSIVNKHLAVSKALVKAGA VEARGVDGTPLHVAAAKGFHKGMV LIH GANVDSE+E AT L+ISARQGRLEDVR+LVGAK NPLL
Sbjct: 11 APASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHA-GANVDSEQEGRATPLYISARQGRLEDVRILVGAKVNPLL 165
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI)
HSP 1 Score: 201 bits (510), Expect = 4.390e-63
Identity = 107/120 (89.17%), Postives = 111/120 (92.50%), Query Frame = 1
Query: 13 AAARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEARGVDGTPLHVAAAKGFHKGMVRLIHEEGAN 372
AAA GSVERTVA+LS+GSV+IDGGYGD GRTPLMAASTMGYLRVVRVLLRLG RVSVADN GATALHLSIVNKHLAVSKALVKAGA VEARGVDGTPLHVAAAKGFHKGMV LIH G +
Sbjct: 11 AAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGGCS 130
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI)
HSP 1 Score: 196 bits (497), Expect = 4.280e-61
Identity = 113/151 (74.83%), Postives = 120/151 (79.47%), Query Frame = 1
Query: 13 AAARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEARGVDGTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAK 465
AAA GSVERTVA+LS+GSVDIDGGYGD GRTPLMAASTMGYLRVVRVLLR G RVSVADN GATALHLSIV KHLAVS+ALVKAGA VEARGVDGTPLHVAAAKGFHKGMV LIH + + S + SA + VRVL G K
Sbjct: 11 AAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHVDAVHAIS-------WCWPSALEKSKPIVRVLPGLK 154
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)
HSP 1 Score: 206 bits (525), Expect = 1.930e-59
Identity = 119/157 (75.80%), Postives = 127/157 (80.89%), Query Frame = 1
Query: 10 AAAARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEARGVDGTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPLL 480
A ARGSVERTVALLSRGSVDIDG YGDAGRTPLM ASTMGYLRV RVLLRLG VSVADN GATALHLS+ N+HLAVSKAL+KAGA+VEAR VDG MV LIH GANVDSE+ESGAT L+ SARQGRLEDV+VLVG KANPL+
Sbjct: 2 ATTARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHA-GANVDSEQESGATPLYTSARQGRLEDVKVLVGTKANPLV 143
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)
HSP 1 Score: 135 bits (339), Expect = 5.760e-37
Identity = 85/155 (54.84%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 19 ARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEAR-GVDGTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPLL 480
A GS++ T+A ID G GD +TPLM AS +G RVVR LLR G VSVAD+ G TALH S+ + HLAVSK L++AGAD+EAR G TPLHVAA KGF +GM L+ DS + GAT L ++A GRLE VRVL+ A ANPLL
Sbjct: 8 ASGSIDPTIATTG-----IDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGMKLLM-------DSRLDDGATPLFLAASDGRLEAVRVLLRANANPLL 150
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)
HSP 1 Score: 140 bits (353), Expect = 6.700e-37
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 13 AAARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEARG---------VDG-TPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPLL 480
AA+ GSVERT+ LLS G +ID + G T LM A+ GYLR+VRVLLR G VSV+ + G TALH +I ++LAV+KAL+KAGA+VEA+ V G TPLH+AA +GF +GMV LI+ GANVDS G+T ++I+A G LE V +L KANPLL
Sbjct: 24 AASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINA-GANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLL 188
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)
HSP 1 Score: 133 bits (335), Expect = 2.040e-34
Identity = 84/136 (61.76%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 94 AGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEAR-------GVDGTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPLL 480
AG ASTMGYLRVVRVLLRLG RVS ADN GATALHLSIVNKHLAVSKALVKAGAD+EAR GV TPLHVAAAKGFHKGMV LIH V+ VGAKANP+L
Sbjct: 30 AGPRLWWVASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHA--------------------------GVKGFVGAKANPIL 139
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
UPI001EE61C32 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE61C32)
HSP 1 Score: 65.1 bits (157), Expect = 2.700e-9
Identity = 44/137 (32.12%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 25 GSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALV-KAGADVEARGVDG-TPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQG 429
G++E +LS+ +DID G GRTP+M A+ G++ + +L R+G +S+ G T LHL+ ++ + K ++ K V RG++G TP+ +AA G H+G+++++ + G +V +G LH + R G
Sbjct: 40 GNIEIVKYILSQDFIDIDS-RGKFGRTPVMKAAWGGHVNLFDLLERVGADLSLVSEQGDTILHLACHRDNVPMVKHILSKHIVGVNCRGMNGRTPVMIAAMYG-HRGVLKVLVDNGGDVSLVDSNGENVLHAACRGG 174
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)
HSP 1 Score: 65.1 bits (157), Expect = 2.970e-9
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 232 HLAVSKALVKAGADVEAR------GVD----GTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPLL 480
+LAV+KALVKAGAD+EA+ G D TPLH+AA F + L+ GANV+ ++GAT L++SA GRL VR+L+ KANP L
Sbjct: 15 NLAVTKALVKAGADLEAKAACFTLGPDLTEGNTPLHLAAGGAFGEITTALVGA-GANVNCRLKNGATPLYLSACCGRLGAVRILIRGKANPSL 106
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Match:
A0A3Q2YJ70_HIPCM (Cyclin dependent kinase inhibitor 2C n=1 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YJ70_HIPCM)
HSP 1 Score: 58.5 bits (140), Expect = 1.060e-7
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 1
Query: 109 LMAASTMGYLRVVRVLLRLGTRVSVADNAGATALHLSIVNKHLAVSKALVKAGADVEARG--VDGTPLHVAAAKGFHKGMVRLIHEEGANVDSEKESGATYLHISARQGRLEDVRVLVGAKANPL 477
L +AS G L V +LL+ G V+ + TAL + ++ AV +AL+ A AD R + T H AA +GF VR + GA+V+ E G LH++A+ GR+E VRVLVGA A+PL
Sbjct: 11 LSSASANGNLPEVLLLLQSGASVNGRNIFKRTALQVVKLSS-TAVVEALLDAEADPNLRDPVLGLTVTHDAAREGFAD-TVRALLAHGADVNLADERGNLPLHLAAKWGRVEAVRVLVGATADPL 133
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17012.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.80e-76 / Id = 87.82 Expect = 4.39e-63 / Id = 89.17 Expect = 4.28e-61 / Id = 74.83 Expect = 1.93e-59 / Id = 75.80 Expect = 5.76e-37 / Id = 54.84 Expect = 6.70e-37 / Id = 53.01 Expect = 2.04e-34 / Id = 61.76 Expect = 2.70e-9 / Id = 32.12 Expect = 2.97e-9 / Id = 48.39 Expect = 1.06e-7 / Id = 40.00 Sequence A0A6H5JL58_9PHAE D7G449_ECTSI D7G2C8_ECTSI A0A6H5K1W5_9PHAE D8LH66_ECTSI A0A6H5KSL5_9PHAE A0A6H5JNS0_9PHAE UPI001EE61C32 A0A6H5K5A5_9PHAE A0A3Q2YJ70_HIPCM Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17012.1
>prot_C-linearis_contig96.17012.1 ID=prot_C-linearis_contig96.17012.1|Name=mRNA_C-linearis_contig96.17012.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=160bp
ANCAAAARGSVERTVALLSRGSVDIDGGYGDAGRTPLMAASTMGYLRVVR back to top mRNA from alignment at C-linearis_contig96:26022..26501+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17012.1 ID=mRNA_C-linearis_contig96.17012.1|Name=mRNA_C-linearis_contig96.17012.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=480bp|location=Sequence derived from alignment at C-linearis_contig96:26022..26501+ (Chordaria linearis ClinC8C monoicous)GCAAACTGTGCTGCCGCAGCCCGTGGTTCCGTCGAGCGTACGGTTGCCCT
GCTTTCTCGAGGGTCGGTGGACATCGACGGAGGCTACGGTGATGCGGGCC
GGACCCCTCTGATGGCGGCCTCCACCATGGGATACTTGCGGGTCGTAAGG
GTCCTCTTGAGACTGGGAACCAGAGTGTCCGTGGCGGACAATGCCGGTGC
GACTGCTCTACACCTGTCGATTGTCAACAAACACCTGGCCGTCAGCAAGG
CTCTGGTCAAGGCCGGTGCGGACGTTGAAGCGCGTGGTGTAGACGGTACG
CCGCTTCACGTTGCCGCGGCGAAAGGATTCCACAAAGGAATGGTGAGGCT
GATCCACGAGGAGGGTGCGAATGTCGACAGTGAGAAAGAAAGCGGAGCGA
CATATCTGCACATTTCGGCACGACAAGGGAGACTTGAAGATGTCAGGGTT
CTCGTTGGGGCGAAGGCGAATCCGCTCTTG back to top Coding sequence (CDS) from alignment at C-linearis_contig96:26022..26501+
>mRNA_C-linearis_contig96.17012.1 ID=mRNA_C-linearis_contig96.17012.1|Name=mRNA_C-linearis_contig96.17012.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at C-linearis_contig96:26022..26501+ (Chordaria linearis ClinC8C monoicous) back to top