mRNA_C-linearis_contig95.16999.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig95.16999.1
Unique NamemRNA_C-linearis_contig95.16999.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: D7G7M8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M8_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 7.670e-106
Identity = 179/324 (55.25%), Postives = 231/324 (71.30%), Query Frame = 1 
Query:    1 MDQPLTSSDHLSGGAAGAAEAGVRAQEGEEGKGINSRRFFLFGF-GGSDSSSSPEQESPAARCGLVTVVETIGQDLRMVVWHGSTLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTKARSASERAAAATVVDNAVTELLGIPPEDRPGGAISR 969
            M++PLTSSDHL     GA  A  R  E        SR + LF F  G  ++ SPE +S A+R GL+ V E   +DL  VV +G  +TLLYL++GG WLMISD WSF++T YFMTTS+LTIGYGD+VV  +G DR LDSL+I++GL ++TIWA CAS+   ++R+R V G   PV +FDAE +I + RW L  R+V L VV V GV AFM+GEGA F TSFYW IVT+S+IGYGDVVP+S  M+WFT+  +  I ATG MLETLRF G +PF + T RAE KV+ QF+++ +A+ RAAAA++ + A+TELLGIPPE+RPGG + R
Sbjct:    1 MEEPLTSSDHLRSSEGGAEGAAWRPAE-------ESRGWRLFPFCRGGRTTVSPEHDSLASRYGLLDVAEIRSKDLMTVVVNGIGMTLLYLLLGGLWLMISDAWSFTETVYFMTTSMLTIGYGDVVV--QGADRFLDSLLIVLGLFSITIWAACASQWLSSVRSRRVEGHG-PVAEFDAELSIRKYRWKLIHRLVILLVVFVVGVVAFMLGEGAPFTTSFYWVIVTSSTIGYGDVVPTSPAMKWFTSFYS--IAATGAMLETLRFAGTFPFTVWTLRAEAKVFGQFSRSDTAAGRAAAASLAECAITELLGIPPEERPGGVVGR 312
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A6H5L7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J9_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.480e-103
Identity = 177/323 (54.80%), Postives = 230/323 (71.21%), Query Frame = 1 
Query:    1 MDQPLTSSDHLSGGAAGAAEAGVRAQEGEEGKGINSRRFFLFGFGGSDSSSSPEQESPAARCGLVTVVETIGQDLRMVVWHGSTLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTKARSASERAAAATVVDNAVTELLGIPPEDRPGGAISR 969
            M++PL SSD L     GA   GV  Q  EE +G    R+F F  GG  ++ SP Q+S A+R GL+ V E   +DL  VV +G  +TLLYL++G  WLMISD WSF+DT YFM+TS+LTIGYGD+VV+ +G DRLLDS++I +GL ++TIWA CAS+   + R+R V G   PV +FDAE +I + RW L  R+V L VV+V GV AFM+GEG +F TSFYW IVT+S+IGYGDVVP+S  M+WFT+  +  I ATG MLE LRF G +PF + T RAE KV+ QF++  +A+  AAAA++ D+AVTELLGIPPE+RPGG + R
Sbjct:    1 MEEPLASSDRLRSSERGAE--GVAWQPAEESRGW---RWFPFCRGGR-TTVSPTQDSLASRYGLLDVAEIRSKDLMTVVVNGIIMTLLYLLLGALWLMISDSWSFTDTVYFMSTSMLTIGYGDVVVNERGTDRLLDSVLIALGLFSITIWAACASQWLSSARSRRVEGHG-PVAEFDAELSIRKYRWKLIHRLVVLLVVIVIGVVAFMLGEGTSFPTSFYWVIVTSSTIGYGDVVPTSPAMKWFTSFYS--IAATGAMLEALRFAGTFPFTVWTLRAEAKVFGQFSRRNTAAGGAAAASLADSAVTELLGIPPEERPGGVLGR 314
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BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S3B5W2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B5W2_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 1.220e-13
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 1 
Query:  253 LTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWF 732
            + L +L +G C+ M ++ W F D+ YF   +L T+GYGD+  S+  + ++     IL+GL   +I ATC       ++A+     A  V              ++ + V  L V  + G    MV EG   + S YWA+VTASS+GYGD+V  + P  +F
Sbjct:   36 IILSHLAIGTCFYMFAEEWEFRDSLYFCVVTLTTVGYGDMAPSSD-ISKVFTIFYILLGL---SIVATCLGLLVGRVQAKIEACHAQEVSKLG----------LMLKMVGILVVTTLVGAAYVMVAEGWGVLDSVYWAVVTASSVGYGDIVSGNGPTHYF 181
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S3UR31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR31_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 4.830e-13
Identity = 57/230 (24.78%), Postives = 106/230 (46.09%), Query Frame = 1 
Query:  217 QDLRMVVWHGSTLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIIL--VGLVAVTIWATCASRAA----------RTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLS-----VVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQF 855
            Q +R      +    +Y+++G       +GW F++  YF   + L+IGYGD+ + T+G + +     +L   G +   I    A+  +          +T      GG        +A   +H+     AR+ + LS     +V++ G     + E   ++ SFYW+ VT ++ GYGD VP++  ++WFTT  +LI V +  +   + ++  +P       AE ++ +QF
Sbjct:   58 QTVRRTTAAVTLFFFVYVLIGILVYDSIEGWGFTNAVYFTVNTFLSIGYGDMTI-TRGSEMMFTGFFVLCGAGFIGSAIGVVVANETSTRDEDLHKYRQTKEFHENGG--------EANFQVHKWERQYARKNLLLSFFVILLVVLVGTLVMGIFEDWTYVESFYWSTVTITTTGYGDYVPTTIALKWFTTFYSLIGVIS--LARAMSYIAQFPILARRIEAERRILKQF 276
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S2HDP2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDP2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.030e-7
Identity = 49/227 (21.59%), Postives = 105/227 (46.26%), Query Frame = 1 
Query:  253 LTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAV--------------------------TIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQF 855
            + +LYL +G    M  + W+F++T Y++ ++L T+GYGDIV ++  + R+  +L + +G+  +                          T+  + + + + +       G+ +P+  +  E +  R + +    ++ L+ +LV G     + E      +FYW+ VT +++G+GDV P++   +WF+     +I  T  +  ++ F+   P  +   R    V  Q+
Sbjct:   20 MLILYLFIGLIIGMKLEKWNFTNTMYYIVSTLTTVGYGDIVSNSTPVSRISTALFVFIGVSFIGFAFGVVVSQLLDSADVDLDPPNQNLTLQQSMSDKGSMSFC-----GMRIPMVFYSYELSTMRKK-LFDSWILVLATLLV-GTLCMSILEDWPIDRAFYWSCVTVTTVGFGDVTPTNDITKWFSI--GYMIFGTVCVARSVTFIASIPLTLRKLRMRQDVMSQW 237
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S3P1Y1_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P1Y1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.150e-6
Identity = 58/175 (33.14%), Postives = 82/175 (46.86%), Query Frame = 1 
Query:  304 GWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVG--------LVAVTIWATCASRAARTIRAR-PVGG-------------LAVPVPDFDAEAAIHRCRWMLARRVVS-LSVVLVAGVFA--FMV-------GEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWF 732
            GW+     YF +T++ T+GYGD+VV  K  D L D    L G        LVA+      A  + R +  R PV               +  P PD      I R R+ L  ++V+  S++ + G+F   F V       GE  N++TSFYWAI T ++IGYGD+      +RWF
Sbjct:  287 GWT--SALYFASTTMSTVGYGDLVVE-KTDDNLTDWRSSLYGVAYMMTSLLVAIMFLRAVADMSFRKLTQRGPVRDVMERAFQTLTHWVMGRPRPDDHLYVQIRRLRFQLLSKIVAQFSLLNLIGIFVSRFFVNRYADETGENWNWMTSFYWAIQTTTTIGYGDL-NMPFELRWF 457
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BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A482S490_9ARCH (Two pore domain potassium channel family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S490_9ARCH)

HSP 1 Score: 57.4 bits (137), Expect = 9.630e-6
Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 1 
Query:  586 LSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTK 861
            LS+ + +G       EG  F  +FYWA VTA++IGYGDV P+SA  + FT     +I AT    +  R +  YP  +    +E  V  QFT+
Sbjct:  162 LSISIFSGAACMCAIEGWTFQDAFYWACVTATTIGYGDVTPTSAAGKIFTIFY--VIFATALAAKGFRDLVCYPMLVRQKESEAYVLSQFTE 251
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A3E0PWI9_9ACTN (Two pore domain potassium channel family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3E0PWI9_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-5
Identity = 26/73 (35.62%), Postives = 46/73 (63.01%), Query Frame = 1 
Query:  577 VVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFV 795
            ++++S V   G   + + EG +++ SFY+ +VT +++GYGD+ P+SAP + FT    LI+   G +L  L F+
Sbjct:   11 LIAVSGVFATGTVFYRIVEGWSWVDSFYFTVVTLTTVGYGDLAPTSAPSKLFTAF--LILTGVGAILAFLDFL 81
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A5N5LJG4_9PEZI (Uncharacterized protein n=1 Tax=Coniochaeta sp. 2T2.1 TaxID=1571157 RepID=A0A5N5LJG4_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 1.300e-5
Identity = 61/209 (29.19%), Postives = 95/209 (45.45%), Query Frame = 1 
Query:  247 STLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIIL----VGLVAVTIWATCASRAARTIRARPVGGL-----------AVPVPD-------FDAEAAIH-----RCRW-MLARRVVSLSVVLVAGVFAFMVGE----GANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTML 777
            S   L ++ +G       +GW + D+ Y+   +LLTIG+GDI   T     LL    IL    +G+   +I      R    +R R +G +           A+ + D       F A  AI      R RW MLA  V +  ++L  G   F+  E    G ++  + Y A V+ ++IGYGD+ P+S+  R F  L +L+ V T T++
Sbjct:  160 SVCFLTFVFLGALVFSHIEGWQYQDSVYWADVTLLTIGFGDIAPETPLGRALLFPYAILGITCLGITLASIRRLVLDRGELALRRRRLGKMRDELLKRSPQRAISLCDRERLTLVFAATRAIQSKASRRWRWTMLAMSVGAWLLLLFGGAAVFLRCEKEYQGWSYFNALYMAFVSLTTIGYGDLAPTSSCGRSFFVLWSLLGVPTITIV 368
[Close]
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A482S9V1_9ARCH (Two pore domain potassium channel family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9V1_9ARCH)

HSP 1 Score: 57.0 bits (136), Expect = 2.240e-5
Identity = 47/165 (28.48%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:  262 LYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVT-IWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLI 753
            +Y +VG   +   +GW   D   F+T +L TIGYG +  +T    R+  S  I +G++ +  I A       R +R R      +        A ++   W+L          L+ G   F   EG  F  +FY+A VT +++GYGD+  S    +WF  +  LI
Sbjct:  112 IYYLVGCLVMNYYEGWGLLDCLSFITQTLTTIGYGYLHPTTSS-ARIFVSFYIFIGVLMIFGIMADITYSIVRFVRKRYHKPAKLNKLQVIVRAVLNCIMWVLITFAT-----LLFGAAMFAATEGWAFDKAFYFAAVTITTVGYGDLHVSQPSTKWFNLVYMLI 270
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G7M8_ECTSI7.670e-10655.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7J9_9PHAE4.480e-10354.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3B5W2_9EUKA1.220e-1332.50Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3UR31_HETAK4.830e-1324.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2HDP2_9STRA1.030e-721.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3P1Y1_9STRA3.150e-633.14Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A482S490_9ARCH9.630e-638.04Two pore domain potassium channel family protein n... [more]
A0A3E0PWI9_9ACTN1.110e-535.62Two pore domain potassium channel family protein n... [more]
A0A5N5LJG4_9PEZI1.300e-529.19Uncharacterized protein n=1 Tax=Coniochaeta sp. 2T... [more]
A0A482S9V1_9ARCH2.240e-528.48Two pore domain potassium channel family protein n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:472396..476425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue8.3e-86
Seed eggNOG ortholog2880.D7G7M8
KEGG koko:K05389
KEGG TC1.A.1.7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.potassium channel activity
EggNOG OGsKOG1418@1,KOG1418@2759
Ec32 ortholog descriptionTwo pore domain potassium channel domain
Ec32 orthologEc-22_001770.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04040
Exons9
Model size969
Cds size969
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930817.0865893-CDS-C-linearis_contig95:472395..4725011622930817.0865893-CDS-C-linearis_contig95:472395..472501Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 472396..472501 +
1690881265.1275523-CDS-C-linearis_contig95:472395..4725011690881265.1275523-CDS-C-linearis_contig95:472395..472501Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 472396..472501 +
1622930817.0997865-CDS-C-linearis_contig95:473761..4738741622930817.0997865-CDS-C-linearis_contig95:473761..473874Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 473762..473874 +
1690881265.1454542-CDS-C-linearis_contig95:473761..4738741690881265.1454542-CDS-C-linearis_contig95:473761..473874Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 473762..473874 +
1622930817.1141293-CDS-C-linearis_contig95:474193..4743101622930817.1141293-CDS-C-linearis_contig95:474193..474310Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 474194..474310 +
1690881265.159392-CDS-C-linearis_contig95:474193..4743101690881265.159392-CDS-C-linearis_contig95:474193..474310Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 474194..474310 +
1622930817.1287825-CDS-C-linearis_contig95:474559..4747311622930817.1287825-CDS-C-linearis_contig95:474559..474731Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 474560..474731 +
1690881265.1725693-CDS-C-linearis_contig95:474559..4747311690881265.1725693-CDS-C-linearis_contig95:474559..474731Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 474560..474731 +
1622930817.1443987-CDS-C-linearis_contig95:474944..4750431622930817.1443987-CDS-C-linearis_contig95:474944..475043Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 474945..475043 +
1690881265.181888-CDS-C-linearis_contig95:474944..4750431690881265.181888-CDS-C-linearis_contig95:474944..475043Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 474945..475043 +
1622930817.1588051-CDS-C-linearis_contig95:475514..4756421622930817.1588051-CDS-C-linearis_contig95:475514..475642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 475515..475642 +
1690881265.1916697-CDS-C-linearis_contig95:475514..4756421690881265.1916697-CDS-C-linearis_contig95:475514..475642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 475515..475642 +
1622930817.173748-CDS-C-linearis_contig95:475900..4759171622930817.173748-CDS-C-linearis_contig95:475900..475917Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 475901..475917 +
1690881265.20135-CDS-C-linearis_contig95:475900..4759171690881265.20135-CDS-C-linearis_contig95:475900..475917Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 475901..475917 +
1622930817.1957006-CDS-C-linearis_contig95:475990..4760781622930817.1957006-CDS-C-linearis_contig95:475990..476078Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 475991..476078 +
1690881265.211727-CDS-C-linearis_contig95:475990..4760781690881265.211727-CDS-C-linearis_contig95:475990..476078Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 475991..476078 +
1622930817.210525-CDS-C-linearis_contig95:476296..4764251622930817.210525-CDS-C-linearis_contig95:476296..476425Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 476297..476425 +
1690881265.2215233-CDS-C-linearis_contig95:476296..4764251690881265.2215233-CDS-C-linearis_contig95:476296..476425Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 476297..476425 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16999.1prot_C-linearis_contig95.16999.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig95 472396..476425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig95.16999.1

>prot_C-linearis_contig95.16999.1 ID=prot_C-linearis_contig95.16999.1|Name=mRNA_C-linearis_contig95.16999.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=323bp
MDQPLTSSDHLSGGAAGAAEAGVRAQEGEEGKGINSRRFFLFGFGGSDSS
SSPEQESPAARCGLVTVVETIGQDLRMVVWHGSTLTLLYLVVGGCWLMIS
DGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIW
ATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVL
VAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETL
IIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTKARSASERAAAATV
VDNAVTELLGIPPEDRPGGAISR
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mRNA from alignment at C-linearis_contig95:472396..476425+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig95.16999.1 ID=mRNA_C-linearis_contig95.16999.1|Name=mRNA_C-linearis_contig95.16999.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4030bp|location=Sequence derived from alignment at C-linearis_contig95:472396..476425+ (Chordaria linearis ClinC8C monoicous)
ATGGATCAACCCTTGACATCAAGCGACCACCTTAGCGGTGGTGCGGCTGG
GGCGGCAGAAGCAGGCGTGCGAGCGCAGGAGGGGGAGGAGGGCAAAGGCA
TAAACAGTGAGAGCCACTTTGCTCGATTCAACACAACTCTAGTCTAGATC
AAACCATCCCATCACGCACTCTAGAGGCAGACCTCTCCGGTACTATTGCT
TGTAGGAAAAGGTTTTCGAGTTTCGACGGCTTGCTTCCCACGATAAATTA
GAATGGCCGTGGTTGTCTTTTGCGCCGCGTGGAGGTGAAGGGTGTTTTCT
GTTGGACCTCCTGCGTGTCGTTTATCATTCTGGACGATGTCCCATGCCCC
ATGGCCCACTTTTGTCGCTGGTAGAGGCAGGCCTGATGTGATGAAGAAAA
TAAAAGATAAACGGATGAAAAATATTGTTTTTTTCTCGACGAAATACGCT
TTTCTCATCCAGCGCAACCACAGTCAGTCCTGAAAGCAAAATATGGCTGC
CGCTGCAGAGCACCTAGACCAGCACACGTCGTAACCGAAATACGTTCACC
GTGAGGAAGATCGCGGCAGACGCACAGGTGGAAGGCCAACGTAGAACATG
GTTGGCACGCCGCGATATTCGACCCACTAGAGAGAAGCACGCCGTTTTAA
ACGCCCATCACTCTGCTTGCACCGACTGAGAGGGGGCGAGAGAAGCAAAC
CGTGATACATCTGAACGGGGTACACTAAACCGCCCACAAACGAACGAGTC
AAGAATGAAACTTAAGAGAGAATCTCGCACGAGAGAGAGACAGAGAGAGA
GACAGAGAAAAAAGAATAAGATGACATTCCACACGTGACGTGCAGAAATC
GAACAAAGAAAATAGGAGGTCCTCCGATTTACCACGCCCCCCAAGATACG
TGCGGAAGATCAGACAGAGAGAGAGAGAGATTGCACAGCAGTCTCAATCA
GCCACCTCCTTTTTGTTGGCGGGGGCGGACATCGTCCCTCGCACGCACCG
TAGTTTTCTGCAAGCGTGCATGTGACCGCAAAGCGCGCCAAGCGGCGTCG
TTCCTACAGCACCCCCCATCCCAAGCAGTGTCGTGCTTTTTCTCTAGTCG
GGGCGGCTCCTGTGCGCGTGTGTTTCCTGGTCTTCCGGCGGACAGCGGAC
ACAAGCAACCTGAAAAGCCAGCCCCGTTCGATCGGGACACGCTTCTTTTC
CTCCCATCCCGAAGAAACGTCTTGGCTTGGCGCGAGCTTTTCCCCTCTCT
CTGACGCTACCCCTCTCACGCCACTACTCCCCATCTCTCTGTCGCGCGTC
CCGTCCCACCTATGATACATACCACCGTGTCCGTGTCCCATGATCGGATC
GGGTCAGATCGGATAGGCCGGCGGTTTTTCTTGTTCGGCTTTGGGGGGTC
TGATTCTTCCTCTTCTCCTGAGCAGGAATCGCCGGCCGCTAGATGCGGCC
TTGTCACGGTAGTGGAGACCATTGGCCAGGTGTGTACGAAGTAGGGGTGC
ACCGTGTTCGCCTGTTGCCGGCGAGCGGCGTGACTCGAAAGCGATCGATT
TTTTCCAAACGAAGAGACCGGTGGTGCTGTGCACAACCCTGAACCTGATC
CTGCAAGCCTTGTCCCAGCTGTGTGTGCCCCTTTTCCATTTGTCCTCGAA
GTCGACTTTGAAGCTGAGTTCCCCTCCGCGGAGTGGGGGGTCTCAATGCT
GTCGACGTCGTCCAGTTCACGCGCGTGTATACGTTAGCGTACCCCTCACC
GCACCGCACTGCACCACGCCCCTGTTGTCGCCTTTTGTTGTGTCTTAGGA
CCTGAGGATGGTGGTGTGGCACGGGTCCACGCTGACCTTGCTGTACCTGG
TGGTAGGGGGGTGTTGGTTGATGATCTCGGACGGCTGGTCCTTCTCCGAT
ACTTTCTACTTCATGGTGGGTTAGCTTGAGGGCAAGGGTAGGGAGGAATA
GGGCCGCCCCTGAAGGTGTTGCCCAGCCCTATATCTGAAACGCTCTAGTT
CGCGTTTAGGGCAACGGGGAAAGCTCGCCTTTGTTTGTCATCGCCATCCC
CGTGTCATGCCGTTCGTTTTTTCAAAGTTCCAACGCGGCGCTGGCTGTAG
ATGCCGCCGTTGCGTCTAACCCTTGCCCTTACCCTCAACCCTAAAATTGC
TGCTATCGTCGCAGACGACGTCCCTGTTGACGATAGGATACGGGGACATC
GTGGTGAGTACAAAGGGGTTAGATCGTCTTCTCGACTCTCTCATTATTCT
TGTTGGGCTGGTGGCCGTCACCATCTGGGCCACGTGCGCCTCCCGGGCCG
CTCGAACCATTCGCGCCAGGCCGGTCGGAGGGCTAGGTGCGTGGGTGTAA
ACTGCTGTTGTTTGTGAGTTGTTGGTGGTGGCGTTGGTGGTTGGGGTTGG
GGGTACTTGCCGCTGCTGCGACGTAGATCGACGCCTGCATGTTTTGCCCT
GGACATCGATCGCCGAACCGTACTTCTCCGAACACAGGGTGTTGCCGGCG
GGAGTTGATTGTTTCCCCTCTCTGCCCCCCTCCCCTCGATGCTCGCCAGC
GGTTCCTGTGCCTGATTTCGACGCTGAAGCGGCGATCCATAGGTGTCGGT
GGATGCTGGCACGGCGCGTGGTGTCGCTCTCCGTGGTGCTTGTTGCCGGT
GAGGGGCAAAGGTTCAAGTTACATTCGGTTGGGCATTCTGTCGCCGTTGC
CAGCGCTGTCGTTGCTGCTGCCGGTGCTGGTGCGGTTACTGTTTCCTCAC
ACTTGCGGAGCTCATCAAGAGAAAGCGCCAGCACGAGCAGTGTGCTGTCG
ATCGCGAGGCGCGCAAGCCAATGCTATGCCACGTGGAGGCATGCAGAGCA
GATGCACAGAGAGGGCATGTTGTTTGCTGCTTACACTCCCCCGTAGGTGC
GTTGATGTCATAAGCGGCACGAGATTTTGTTTTCCTGGATGGCAGTGCCA
GCCCGTACATGACAAACATGACCCTCGGGGGTGTTCCACCGCCGAATGTT
TTAGCAGACCTCACTTTCCTTCCGCGCGGGCGCACCGTCTCTGTACGCCC
GACCAACAAACACGCTACCGCACCGTAAACTTAAGCTTAACGGCGCCCGG
TTTTTGTCAATGTTGGCAGGCGTTTTTGCTTTCATGGTGGGAGAAGGGGC
CAATTTCATCACGAGCTTCTACTGGGCCATCGTGACTGCCAGCTCCATCG
GCTACGGCGACGTCGTGCCCTCCTCCGCGCCGATGCGATGGTTCACGGTT
TTTTACAGGCAGGCGACGGGCTAGAAGTATACCCTGAACCACTTGTCTGT
GGGGCTTGTCTCGTTTACTGACACAACAACGTATCGTACGCGAGGGTGGC
AACAACTGCGACAGCAACACAGTTTGGTCAGTTTCTCCTGCGCTTCTAGA
CCCTGCTCCTCGTAAATGGTACTAATTCCGCTGCCCCAGACGACGTCAAA
CAAACCACCCCCTTGCTGCAAGCGGGCGCTTGGGTCGATGCTTGAGACAC
TTGAGACACTTGAGACACTCATGTAATGTAGCGTACAAGGTAAGGTCAGC
CTTTTCCCCGACCGCCGCGACGACGGATCAATCTGTCTCTCGCAGCATCG
TGGCCACCGGCACCATGCTCGAGACTCTCAGGTTCGTCGGCGACTACCCC
TTCAAGATCTCCACGTTTCGGGCGGAGGGGAAAGTGAGTCGAGTCCACCG
GGGTCGGGGTCGATTTTTTGCTCGGGCTCCGCGGGGTTTGGTGGCTCTAA
GGGTCGTACTACCTGCGGTTCGAACGAAGCTGTTTTTTCGTGTGCATTCT
GTCTCGTGTCAACCGCGGCGTCCTCGACTATTACAGCGGCGTACACCCTC
TGCGTCCCCTCGTTGTTTCCTCGTGCGGTCTTGTTTTTGTCGTTTTTCTA
GGTTTACGAGCAGTTCACGAAGGCGAGATCGGCCTCGGAACGCGCCGCTG
CAGCGACCGTCGTGGATAACGCCGTTACGGAGCTGCTGGGGATACCCCCC
GAAGACCGGCCTGGGGGCGCCATCAGCAGG
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Coding sequence (CDS) from alignment at C-linearis_contig95:472396..476425+

>mRNA_C-linearis_contig95.16999.1 ID=mRNA_C-linearis_contig95.16999.1|Name=mRNA_C-linearis_contig95.16999.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1938bp|location=Sequence derived from alignment at C-linearis_contig95:472396..476425+ (Chordaria linearis ClinC8C monoicous)
ATGGATCAACCCTTGACATCAAGCGACCACCTTAGCGGTGGTGCGGCTGG
GGCGGCAGAAGCAGGCGTGCGAGCGCAGGAGGGGGAGGAGGGCAAAGGCA
TAAACAATGGATCAACCCTTGACATCAAGCGACCACCTTAGCGGTGGTGC
GGCTGGGGCGGCAGAAGCAGGCGTGCGAGCGCAGGAGGGGGAGGAGGGCA
AAGGCATAAACAGCCGGCGGTTTTTCTTGTTCGGCTTTGGGGGGTCTGAT
TCTTCCTCTTCTCCTGAGCAGGAATCGCCGGCCGCTAGATGCGGCCTTGT
CACGGTAGTGGAGACCATTGGCCAGGCCGGCGGTTTTTCTTGTTCGGCTT
TGGGGGGTCTGATTCTTCCTCTTCTCCTGAGCAGGAATCGCCGGCCGCTA
GATGCGGCCTTGTCACGGTAGTGGAGACCATTGGCCAGGACCTGAGGATG
GTGGTGTGGCACGGGTCCACGCTGACCTTGCTGTACCTGGTGGTAGGGGG
GTGTTGGTTGATGATCTCGGACGGCTGGTCCTTCTCCGATACTTTCTACT
TCATGGACCTGAGGATGGTGGTGTGGCACGGGTCCACGCTGACCTTGCTG
TACCTGGTGGTAGGGGGGTGTTGGTTGATGATCTCGGACGGCTGGTCCTT
CTCCGATACTTTCTACTTCATGACGACGTCCCTGTTGACGATAGGATACG
GGGACATCGTGGTGAGTACAAAGGGGTTAGATCGTCTTCTCGACTCTCTC
ATTATTCTTGTTGGGCTGGTGGCCGTCACCATCTGGGCCACGTGCGCCTC
CCGGGCCGCTCGAACCATTCGCGCCAGGCCGGTCGGAGGGCTAGACGACG
TCCCTGTTGACGATAGGATACGGGGACATCGTGGTGAGTACAAAGGGGTT
AGATCGTCTTCTCGACTCTCTCATTATTCTTGTTGGGCTGGTGGCCGTCA
CCATCTGGGCCACGTGCGCCTCCCGGGCCGCTCGAACCATTCGCGCCAGG
CCGGTCGGAGGGCTAGCGGTTCCTGTGCCTGATTTCGACGCTGAAGCGGC
GATCCATAGGTGTCGGTGGATGCTGGCACGGCGCGTGGTGTCGCTCTCCG
TGGTGCTTGTTGCCGCGGTTCCTGTGCCTGATTTCGACGCTGAAGCGGCG
ATCCATAGGTGTCGGTGGATGCTGGCACGGCGCGTGGTGTCGCTCTCCGT
GGTGCTTGTTGCCGGCGTTTTTGCTTTCATGGTGGGAGAAGGGGCCAATT
TCATCACGAGCTTCTACTGGGCCATCGTGACTGCCAGCTCCATCGGCTAC
GGCGACGTCGTGCCCTCCTCCGCGCCGATGCGATGGTTCACGGCGTTTTT
GCTTTCATGGTGGGAGAAGGGGCCAATTTCATCACGAGCTTCTACTGGGC
CATCGTGACTGCCAGCTCCATCGGCTACGGCGACGTCGTGCCCTCCTCCG
CGCCGATGCGATGGTTCACGACACTTGAGACACTCATACACTTGAGACAC
TCATCATCGTGGCCACCGGCACCATGCTCGAGACTCTCAGGTTCGTCGGC
GACTACCCCTTCAAGATCTCCACGTTTCGGGCGGAGGGGAAACATCGTGG
CCACCGGCACCATGCTCGAGACTCTCAGGTTCGTCGGCGACTACCCCTTC
AAGATCTCCACGTTTCGGGCGGAGGGGAAAGTTTACGAGCAGTTCACGAA
GGCGAGATCGGCCTCGGAACGCGCCGCTGCAGCGACCGTCGTGGATAACG
CCGTTACGGAGCTGCTGGGGATACCCCCCGAAGACCGGCCTGGGGGCGCC
ATCAGCAGGGTTTACGAGCAGTTCACGAAGGCGAGATCGGCCTCGGAACG
CGCCGCTGCAGCGACCGTCGTGGATAACGCCGTTACGGAGCTGCTGGGGA
TACCCCCCGAAGACCGGCCTGGGGGCGCCATCAGCAGG
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