Homology
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI)
HSP 1 Score: 94.4 bits (233), Expect = 1.050e-19
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 2
Query: 2 SSVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKVVYHRAWPPANSAAAADGGAPRGYWGRRAPTRSPVSCNED 265
+ VFYPS+QEIWPELY N++ VEVD+ VEI SDSG EY+Y GPQLKV Y RA PPA++A A PR GRR +R+P+ N D
Sbjct: 459 AGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSG-EYQYVGPQLKVTYLRAAPPADAAEA----TPRPA-GRRTASRAPIPFNSD 540
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI)
HSP 1 Score: 83.6 bits (205), Expect = 2.900e-16
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 2
Query: 2 SSVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKVVYHRAWPPAN 178
S VFYP +QEIWPELY+ N++ VEVD+ +EILSD+ GE+R+ GP LKV Y RA PP +
Sbjct: 191 SRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPPVD 249
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE)
HSP 1 Score: 80.5 bits (197), Expect = 6.150e-15
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query: 2 SSVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKVVYHRAWPPANS 181
S VFYPSL+++WPELY +V+AVEVD+ VEILSD G E+RY GP LKV Y R PP ++
Sbjct: 309 SRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTRITPPVSA 368
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI)
HSP 1 Score: 73.2 bits (178), Expect = 2.470e-13
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 2
Query: 2 SSVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKV 148
S VFYPSL+E+WPELY +V+AVEVD+ VE+LSD G E+RY GP LKV
Sbjct: 131 SRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI)
HSP 1 Score: 58.5 bits (140), Expect = 3.360e-7
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 2
Query: 2 SSVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKVVYHRAWP----PANSAAAA 193
++V +PS+ EIWPE+Y + N++ +EVD+ VE+ S S G Y GP LK+ Y R+ P ++AAAA
Sbjct: 572 AAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRS-SDGNILYTGPTLKITYRRSAARTSAPTDAAAAA 638
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE)
HSP 1 Score: 53.1 bits (126), Expect = 2.510e-5
Identity = 23/53 (43.40%), Postives = 39/53 (73.58%), Query Frame = 2
Query: 5 SVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKVVYHRA 163
++ YPS+++IWPE+Y +V+ VEVD+ V++ S S G++ + P +KV+Y RA
Sbjct: 523 TITYPSMEDIWPEVYSARSVKVVEVDMTVDVRS-SDGKWVHSWPSVKVMYRRA 574
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Match:
A0A6H5JYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP1_9PHAE)
HSP 1 Score: 52.0 bits (123), Expect = 6.450e-5
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query: 2 SSVFYPSLQEIWPELYDMPNVQAVEVDIEVEILSDSGGEYRYHGPQLKVV 151
++V +PS+ EIWPE+Y + N++ +EVD+ VE+ S S G Y GP LK+V
Sbjct: 709 AAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRS-SEGNILYTGPTLKLV 757
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16994.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 7
0 1 Expect = 1.05e-19 / Id = 57.95 Expect = 2.90e-16 / Id = 61.02 Expect = 6.15e-15 / Id = 61.67 Expect = 2.47e-13 / Id = 67.35 Expect = 3.36e-7 / Id = 44.12 Expect = 2.51e-5 / Id = 43.40 Expect = 6.45e-5 / Id = 48.00 Sequence D7FZ48_ECTSI D7G7N5_ECTSI A0A6H5JDQ6_9PHAE D7G7N4_ECTSI D8LCK7_ECTSI A0A6H5K0L1_9PHAE A0A6H5JYP1_9PHAE back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16994.1
>prot_C-linearis_contig95.16994.1 ID=prot_C-linearis_contig95.16994.1|Name=mRNA_C-linearis_contig95.16994.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=147bp
LQCVLPQLARDLAGAVRHAKRPGGGGGHRGRDFIRQRRRVPVPRSPAEGG back to top mRNA from alignment at C-linearis_contig95:415099..416391+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig95.16994.1 ID=mRNA_C-linearis_contig95.16994.1|Name=mRNA_C-linearis_contig95.16994.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1293bp|location=Sequence derived from alignment at C-linearis_contig95:415099..416391+ (Chordaria linearis ClinC8C monoicous)CTCCAGTGTGTTCTACCCCAGCTTGCAAGAGATCTGGCCGGAGCTGTACG
ACATGCCAAACGTCCAGGCGGTGGAG GTGTGTTCGGCGATGAATCCTATA
GGGGTAGGGGGTCAAGGGTCAAGGGTGATGGGTACCCACTTCTGTCTGAT
TCGGGCGGAAAACACGCGCCCATTCACGCGGTGTCAGCCCACGGCGGTGT
GTGGTTGTTGGCTGTTTGTGCTGTAACTCAAACCGCGCCTCTGAAGACAC
AGGCTACCCTCAGAAGATGATGGGCCTGTTGTGGTAGTATTGACCCACTA
CCGGGGGCGGCTTGTTTCCTTTGTTTGGTGATACTTCGAAGTACTCAGGC
AAGGAGAGAGGTTCACACAAGAACAAGAGTGTGACCCGAGGAAGAAGAGC
ACGAAGACTCTTCGCGTCTCGGTGCCGCAGTTGGGTTGGAAGAGTTGGAT
ATCCGGTGGGTTTCTTGTCAACCCCAACGGGCCGATAAGATACCCCACTT
AAGATCCAATCTTACTGTATTCTGGTATGTGTAGGTCTGGTTCTCGTAGC
TCTGGTTCTCGTATGTATTCATCTGTCTCCACACCTCTGTTTTGTTCTCT
TCTGCCGTGCAGGTGGACATCGAGGTCGAGATTTTATCCGACAGCGGCGG
CGAGTACCGGTACCACGGTCCCCAGCTGAAG GTAAGGCGCGGATGATGCC
GTCGAGCCGTGCCTCGTGGACTCGTAGGAGACGCCGGTGGTGTCATGGCT
AGATAGCTGCACTTGGCCCCCAGCGGGCTGGATGGTTCGTGGGCCAGCTT
TTGGGGAGAGGGGCGGGTGTTGTGTGCGCTTCGTTCTTCGATCTGCTGCG
CGTCAGCGACCTCCCGGAAGGATGACTTCACCCCAGCATACCGCCAACCC
CGCGAGCTGAACCCCCTCCTAGTCAATGCCCCGCGTGGTGATTTTGGAAT
GCTTTCCCTCCTTGTGCCGGATCGTTGTATGTACGTGAATGTTTCAGGTG
GTCTACCATCGCGCTTGGCCCCCGGCCAACTCCGCGGCCGCCGCCGACGG
GGGGGCACCGAGAGGGTACTGGGGAAGGAGGGCACCCACCCGCTCGCCCG
TTTCGTGCAACGAGGACGAGTTCCGCCCGATTTGTTCCCACGTTATTGCG
GATACCCACCGGTAAATGCGCCCTCGGGTGGTGGTGGATCTCGCGATGTA
CGTGCCTTTGTCAGGTCCCTCGCACCTCCGCCATGCCCGTCGCACACGGC
ACGGCGTCGCCGTGACCGTCACCATCATCACCAGCGCCACTAG back to top Coding sequence (CDS) from alignment at C-linearis_contig95:415099..416391+
>mRNA_C-linearis_contig95.16994.1 ID=mRNA_C-linearis_contig95.16994.1|Name=mRNA_C-linearis_contig95.16994.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at C-linearis_contig95:415099..416391+ (Chordaria linearis ClinC8C monoicous) back to top