Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 594 |
| Cds size | 336 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930809.241952-UTR-C-linearis_contig95:373148..373406 | 1622930809.241952-UTR-C-linearis_contig95:373148..373406 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig95 373149..373406 + |
| 1690881261.1160307-UTR-C-linearis_contig95:373148..373406 | 1690881261.1160307-UTR-C-linearis_contig95:373148..373406 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig95 373149..373406 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930809.259579-CDS-C-linearis_contig95:373406..373742 | 1622930809.259579-CDS-C-linearis_contig95:373406..373742 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 373407..373742 + |
| 1690881261.1279216-CDS-C-linearis_contig95:373406..373742 | 1690881261.1279216-CDS-C-linearis_contig95:373406..373742 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 373407..373742 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16990.1 >prot_C-linearis_contig95.16990.1 ID=prot_C-linearis_contig95.16990.1|Name=mRNA_C-linearis_contig95.16990.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=112bp
MQPTVSRVCSLSLSLSLSRCLSTVKITPTRFRPTDYQIIITFGRKYNAFG
LKVHPTKPKPGVLSRKRQDKRTRRVAHLNGLRGGPRETLCRRCHPHSAPP
RRHRATSWPSCW back to topmRNA from alignment at C-linearis_contig95:373149..373742+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig95.16990.1 ID=mRNA_C-linearis_contig95.16990.1|Name=mRNA_C-linearis_contig95.16990.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=594bp|location=Sequence derived from alignment at C-linearis_contig95:373149..373742+ (Chordaria linearis ClinC8C monoicous)
GCTCGCTGGTCTGTCTGAATCAAACCCATCGCTAAGGGCGGTACGTACAT
AGACAAATATATGCGTGTGTGCGCGCGCGTTGTGGCGCAAGAACACTACC
TATATCACAATGAACCTCCCTCCCAACCGCCACCACGTACTTGCCTTCAA
CACCGAGCAGCAACAGCTTTTGCCACTCGCCGGCTTGTTGTCGACGCACA
CGACACACCCCAACCGCAACGGCAAGAACACTAGCGAACGCGCAAGACTA
TAATAGCTATGCAGCCGACAGTTTCCAGGGTTTGTTCTCTCTCTCTCTCT
CTCTCTCTCTCTCGCTGTCTGTCTACCGTCAAAATCACGCCAACACGCTT
CCGCCCGACGGACTATCAAATCATCATCACCTTCGGCCGGAAATACAATG
CCTTCGGACTGAAGGTCCACCCAACGAAGCCCAAACCTGGCGTTCTTTCG
CGAAAAAGGCAAGACAAGCGGACCCGTCGCGTGGCTCATCTCAACGGGCT
CCGAGGTGGCCCAAGAGAGACGCTATGTCGCCGTTGCCACCCCCATTCCG
CCCCGCCCCGCCGCCACCGGGCGACCTCTTGGCCTTCTTGCTGG back to topCoding sequence (CDS) from alignment at C-linearis_contig95:373149..373742+ >mRNA_C-linearis_contig95.16990.1 ID=mRNA_C-linearis_contig95.16990.1|Name=mRNA_C-linearis_contig95.16990.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at C-linearis_contig95:373149..373742+ (Chordaria linearis ClinC8C monoicous)
ATGCAGCCGACAGTTTCCAGGGTTTGTTCTCTCTCTCTCTCTCTCTCTCT
CTCTCGCTGTCTGTCTACCGTCAAAATCACGCCAACACGCTTCCGCCCGA
CGGACTATCAAATCATCATCACCTTCGGCCGGAAATACAATGCCTTCGGA
CTGAAGGTCCACCCAACGAAGCCCAAACCTGGCGTTCTTTCGCGAAAAAG
GCAAGACAAGCGGACCCGTCGCGTGGCTCATCTCAACGGGCTCCGAGGTG
GCCCAAGAGAGACGCTATGTCGCCGTTGCCACCCCCATTCCGCCCCGCCC
CGCCGCCACCGGGCGACCTCTTGGCCTTCTTGCTGGATGCAGCCGACAGT
TTCCAGGGTTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGTCTGT
CTACCGTCAAAATCACGCCAACACGCTTCCGCCCGACGGACTATCAAATC
ATCATCACCTTCGGCCGGAAATACAATGCCTTCGGACTGAAGGTCCACCC
AACGAAGCCCAAACCTGGCGTTCTTTCGCGAAAAAGGCAAGACAAGCGGA
CCCGTCGCGTGGCTCATCTCAACGGGCTCCGAGGTGGCCCAAGAGAGACG
CTATGTCGCCGTTGCCACCCCCATTCCGCCCCGCCCCGCCGCCACCGGGC
GACCTCTTGGCCTTCTTGCTGG back to top
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