Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1224 |
| Cds size | 621 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930809.1570334-UTR-C-linearis_contig95:371478..371599 | 1622930809.1570334-UTR-C-linearis_contig95:371478..371599 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig95 371479..371599 + |
| 1690881261.0852506-UTR-C-linearis_contig95:371478..371599 | 1690881261.0852506-UTR-C-linearis_contig95:371478..371599 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig95 371479..371599 + |
| 1622930809.1985788-UTR-C-linearis_contig95:372220..372702 | 1622930809.1985788-UTR-C-linearis_contig95:372220..372702 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig95 372221..372702 + |
| 1690881261.1058025-UTR-C-linearis_contig95:372220..372702 | 1690881261.1058025-UTR-C-linearis_contig95:372220..372702 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig95 372221..372702 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930809.1773424-CDS-C-linearis_contig95:371599..372220 | 1622930809.1773424-CDS-C-linearis_contig95:371599..372220 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 371600..372220 + |
| 1690881261.0957978-CDS-C-linearis_contig95:371599..372220 | 1690881261.0957978-CDS-C-linearis_contig95:371599..372220 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 371600..372220 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16989.1 >prot_C-linearis_contig95.16989.1 ID=prot_C-linearis_contig95.16989.1|Name=mRNA_C-linearis_contig95.16989.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=207bp
MEYFAYDGGVCTAMRSCICWKTSKTKNRCFCTRNVGVFATLRNMVVLLPP
FDVTVSCVRSASNCKRLSALLGPSAEILIFAPFVFSCALRIGRPEPSCHT
VGLKPTCRHKLAESSSLKTAPKIARLCTYTSYVHVLTGLNSPPDFVRGNT
YSCQPWRGSSESCLKQHILDRRQKNIASSADTGTCVFITKRFGPRSLCTP
SNHNPA* back to topmRNA from alignment at C-linearis_contig95:371479..372702+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig95.16989.1 ID=mRNA_C-linearis_contig95.16989.1|Name=mRNA_C-linearis_contig95.16989.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1224bp|location=Sequence derived from alignment at C-linearis_contig95:371479..372702+ (Chordaria linearis ClinC8C monoicous)
TGTGCTTGCGTGTTTGTGTGTGTGATTAGACTAAAGGAGTTGTCCGGTGC
GTTTTTTTTTGCGCGGAGAGAGTATTTTTGGTCTGCGTTGAGTGGTTTTT
GCTGTCGGATGTTGTGTGCACATGGAGTATTTCGCGTATGATGGAGGTGT
GTGTACGGCAATGAGATCTTGTATTTGCTGGAAGACGAGCAAGACAAAAA
ATAGATGCTTTTGTACACGAAACGTGGGGGTCTTTGCCACACTCCGCAAC
ATGGTAGTTCTGCTGCCTCCTTTCGATGTCACCGTGAGCTGCGTGCGGTC
CGCCTCAAATTGCAAACGCCTCTCTGCATTGCTTGGTCCTTCCGCGGAAA
TATTAATATTTGCACCATTCGTTTTTTCGTGCGCGCTTAGGATCGGGAGA
CCAGAGCCTAGCTGTCACACAGTAGGCCTGAAACCGACTTGCCGACACAA
ACTCGCCGAGAGCTCGTCACTTAAAACGGCTCCCAAGATTGCTAGACTAT
GTACGTATACTTCGTATGTACATGTGCTGACGGGGCTGAATTCCCCCCCC
GATTTTGTCCGGGGCAACACATATTCCTGCCAACCTTGGCGCGGTTCTTC
GGAGAGTTGCTTGAAGCAGCACATCCTGGACAGGAGGCAGAAAAATATTG
CCAGCAGCGCGGATACAGGGACGTGTGTTTTTATAACGAAGAGATTTGGG
CCGAGGTCTTTATGCACGCCATCAAATCACAACCCCGCGTGAGATGCGCA
GATAGCAGTTGAGACTGTTCCACTGAGTACCAGTCTAAGGTATCCACGTG
ATCTGGGAGTGAAAATGTCAAGTGTTTGTGCGCAGAATAGCTTGCCACTG
AGTTGCGTGGGGTATGGAGTATTCCACATGTGACGACGGTATATGTAGCG
TACTACAGCGGTAACTGCAATAAGCAGCGTGATGCTTGAAAGTGCCACAG
ATAGATGAGATGTGGATTGGTTCCAAAACGATCTTTTCAAGGATTCGCAA
TTCACAGTAATCAACGAGCGAGTAGGCCCTGCCACAATAACGCCAACGAA
AGACGGAGTTGAACTCTACATTGCAGCAGAACGAAGCGAAACGTTAGGCG
CCATGGGCTTGTCTATTGCGGGGGCGCCCCTCACGTGACGAACGAAGAGG
AATGGTGCACTGTCTACACCAGACCAGTGCAACGTGAAAAGGTTGGGTTT
GTAGTGTAACATATGAGTTTGTGC back to topCoding sequence (CDS) from alignment at C-linearis_contig95:371479..372702+ >mRNA_C-linearis_contig95.16989.1 ID=mRNA_C-linearis_contig95.16989.1|Name=mRNA_C-linearis_contig95.16989.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at C-linearis_contig95:371479..372702+ (Chordaria linearis ClinC8C monoicous)
ATGGAGTATTTCGCGTATGATGGAGGTGTGTGTACGGCAATGAGATCTTG
TATTTGCTGGAAGACGAGCAAGACAAAAAATAGATGCTTTTGTACACGAA
ACGTGGGGGTCTTTGCCACACTCCGCAACATGGTAGTTCTGCTGCCTCCT
TTCGATGTCACCGTGAGCTGCGTGCGGTCCGCCTCAAATTGCAAACGCCT
CTCTGCATTGCTTGGTCCTTCCGCGGAAATATTAATATTTGCACCATTCG
TTTTTTCGTGCGCGCTTAGGATCGGGAGACCAGAGCCTAGCTGTCACACA
GTAGGCCTGAAACCGACTTGCCGACACAAACTCGCCGAGAGCTCGTCACT
TAAAACGGCTCCCAAGATTGCTAGACTATGTACGTATACTTCGTATGTAC
ATGTGCTGACGGGGCTGAATTCCCCCCCCGATTTTGTCCGGGGCAACACA
TATTCCTGCCAACCTTGGCGCGGTTCTTCGGAGAGTTGCTTGAAGCAGCA
CATCCTGGACAGGAGGCAGAAAAATATTGCCAGCAGCGCGGATACAGGGA
CGTGTGTTTTTATAACGAAGAGATTTGGGCCGAGGTCTTTATGCACGCCA
TCAAATCACAACCCCGCGTGAATGGAGTATTTCGCGTATGATGGAGGTGT
GTGTACGGCAATGAGATCTTGTATTTGCTGGAAGACGAGCAAGACAAAAA
ATAGATGCTTTTGTACACGAAACGTGGGGGTCTTTGCCACACTCCGCAAC
ATGGTAGTTCTGCTGCCTCCTTTCGATGTCACCGTGAGCTGCGTGCGGTC
CGCCTCAAATTGCAAACGCCTCTCTGCATTGCTTGGTCCTTCCGCGGAAA
TATTAATATTTGCACCATTCGTTTTTTCGTGCGCGCTTAGGATCGGGAGA
CCAGAGCCTAGCTGTCACACAGTAGGCCTGAAACCGACTTGCCGACACAA
ACTCGCCGAGAGCTCGTCACTTAAAACGGCTCCCAAGATTGCTAGACTAT
GTACGTATACTTCGTATGTACATGTGCTGACGGGGCTGAATTCCCCCCCC
GATTTTGTCCGGGGCAACACATATTCCTGCCAACCTTGGCGCGGTTCTTC
GGAGAGTTGCTTGAAGCAGCACATCCTGGACAGGAGGCAGAAAAATATTG
CCAGCAGCGCGGATACAGGGACGTGTGTTTTTATAACGAAGAGATTTGGG
CCGAGGTCTTTATGCACGCCATCAAATCACAACCCCGCGTGA back to top
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