mRNA_C-linearis_contig95.16988.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: D7G5K9_ECTSI (HA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K9_ECTSI) HSP 1 Score: 689 bits (1779), Expect = 2.890e-240 Identity = 326/394 (82.74%), Postives = 358/394 (90.86%), Query Frame = 1 Query: 1 QHGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEGGPWPLCCQGMRLGARVSGVRNQSLYVRTDVARWYQLDAMGFVWDLTDAPFRQVHDALLQYKAEHGNLNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKASYVNVVRALKAYRKVKGRDLSVPSSFVLPSFLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLGVFAQSREAILANVAKGLRSYLEVVGDTMVPQGFVVPDGEAWPEECRGQKLGWMLYGLRRRPERLDRHPEVRAEITSLGFSWEVPRKGSRGPRKRKSLA 1182
QHGNLLLTQNYVMP +E+ G + EHRGWRLGQK Y M+FWKRH+RDRPSRR ELA LGFVWGRLQDEYNLF+EALLAY+++EG LLVP SF VPE PWPL CQGMRLGA+V+GVRNQSLYVRTDVARWYQLDA+GFVWDL+DAPFRQV+DALLQYKAEHGNL+VPVAF VP SPPWHQD+WGLALGQRVLDIRA HRYIRNDPERIRLLN+ GFRW DA KASY NVVRALKAYRK+KGRDLSVPSSFV+PSFLPWP SCWGLRLGTALVDIRSKGRYLKG++ ++RR ELERLGVFAQSREAILANV KGLR+YL V G+TMVPQGFVVPDGEAWPEECR QKLG MLYGLRR PERL+RHPE+RAEIT+LGFSW+VP++G +RKS A
Sbjct: 182 QHGNLLLTQNYVMPDEEDNGNMLEHRGWRLGQKVYTMKFWKRHVRDRPSRRAELAKLGFVWGRLQDEYNLFLEALLAYRDIEGCLLVPTSFVVPETEPWPLSCQGMRLGAKVAGVRNQSLYVRTDVARWYQLDAIGFVWDLSDAPFRQVYDALLQYKAEHGNLHVPVAFSVPSSPPWHQDLWGLALGQRVLDIRATHRYIRNDPERIRLLNEVGFRWTDATKASYGNVVRALKAYRKIKGRDLSVPSSFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGEERQQRRMELERLGVFAQSREAILANVVKGLRTYLSVFGNTMVPQGFVVPDGEAWPEECRKQKLGSMLYGLRRNPERLNRHPEIRAEITALGFSWKVPKRG-----RRKSTA 570
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A7S3DW30_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DW30_9STRA) HSP 1 Score: 219 bits (557), Expect = 6.720e-61 Identity = 121/321 (37.69%), Postives = 179/321 (55.76%), Query Frame = 1 Query: 4 HGNLLLTQNYVMPCDEEGGGVREHRGWR---LGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEGGP-WPLCCQGMRLGARVSGVRNQSLYVR--TDVARWYQLDAMGFVWDLTDAPFRQVHDALLQYK-----------AEHGNLNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKASYVNVVRALKAYRKVKGRDLSVPSSFVLP---------SFLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLG 888
HG++++ + +V+P +++ R + WR LG Y+MR+W++H++ RP R +L LGFVW RLQ E+NL +EAL+ Y + G +LVP F VP G WP G+ LG + +R ++ ++R + +AR QLD +GFVWD+ + FR + L + A L VP + VP+SP W + +WG LG R IR K YI+ +P+R +L++ GF W+ A ++ VV A Y ++ R L VPS F +P PWP WGL LG L D+R KG YL G+ GE+RR +L+ LG
Sbjct: 109 HGDVVIPRRFVIPAEDQ----RFPQIWRNVDLGGVVYNMRWWQKHVQQRPERVAQLNELGFVWERLQPEWNLVLEALITYSSIYGHVLVPSKFVVPYGNDQWPKATWGITLGDCIYRIRARNDFLRGSSSIARRDQLDGLGFVWDVHEHRFRTFYGTLRHFARLNQMGAFSKDARTKPLRVPSTYTVPKSPEWPRGVWGYPLGARCSAIRQKELYIKGEPQRRMMLDELGFHWSGNADFGWLVVVHAAAIYSRLHHRKLDVPSHFKVPYPPEDLVDKDEWPWPEHLWGLPLGQRLKDVRCKGAYLHGELGEKRRMQLDALG 425
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A7S4K5S7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K5S7_9STRA) HSP 1 Score: 207 bits (528), Expect = 6.300e-57 Identity = 125/351 (35.61%), Postives = 175/351 (49.86%), Query Frame = 1 Query: 4 HGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEGGP--WPLCCQGMRLGARVSGVRNQSLYVR--TDVARWYQLDAMGFVWDLTDAPFRQVHDALLQYKA-------------------------EHGNLNVPVAFCVPQSPP--WHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKASYVNVVRALKAYRKVKGRDLSVPSSFVLPS-------------------------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLG 888
HG+L++ + +V+P EE E G L YDMR+W+ H+R R EL +LGFVW RLQ E+NL +EAL+AY G +LVP SF VP G WP G+RLG+ V +R + ++R T +R QLD +GFVWD+ + F + + AL ++ + L VP F VP+ W +D+WGL LG + IR K Y++N P+R R L + GF+W+ A ++ VV A + ++ GR L VP +FV+P+ PWP WG LG L D+R KG YL G RRA+L+ LG
Sbjct: 74 HGDLVIPRRFVVPGSEEY--PEEWHGIDLSSSVYDMRWWQLHVRSNADRVAELNSLGFVWERLQPEWNLVLEALVAYSMKCGHVLVPSSFVVPRGDDETWPRATWGIRLGSCVHRMRIRHDFLRGPTAASRKAQLDGLGFVWDVNERAFLRTYRALKHFRRMERRGXXXXXXXXXXXXXXXXXXXRRYKALRVPSTFVVPEGEERGWPEDLWGLPLGAKCSAIRHKGLYVKNQPDRQRALEELGFQWSGNATLGWLQVVHAAAVFSRLHGRTLDVPINFVVPAPPTHRAPDEQESDGGVDHRVTGTEDAWPWPEQLWGFPLGQRLKDVRLKGAYLTGDAASSRRAQLDALG 422
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A1Z5KBG8_FISSO (HA domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBG8_FISSO) HSP 1 Score: 205 bits (521), Expect = 6.470e-57 Identity = 121/319 (37.93%), Postives = 166/319 (52.04%), Query Frame = 1 Query: 4 HGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEGG-PWPLCCQGMRLGARVSGVRNQSLYVR--TDVARWYQLDAMGFVWDLTDAPFRQVHDALLQYK----------AEHGN-LNVPVAFCVP-QSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKASYVNVVRALKAYRKVKGRDLSVPSSFVLPS-------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLGVF 894
HG+L++ + Y + + G L Y+M++W+ HI+ RP R EL LGFVW RLQ E+NL +EAL+ Y + G +LVP+ F VP G WP G+ LG V +R + ++R T AR QLD +GFVWD+ + F + ++ + Y E L VP + VP + P W + WG LG + +R K Y++ PER RLL + GFRW + ++ VV A Y K+ R L VP FV+P PWP WGL LG L DIR KG Y+KG EER +LE LG +
Sbjct: 19 HGDLVIPRRYTVTSK---AFPSDWYGLDLSSTVYNMKWWQLHIQQRPDRVAELNRLGFVWERLQPEWNLVLEALITYYNLHGHVLVPNQFVVPLGDVQWPRATWGIPLGKSVYRIRARHDFLRGPTAEARRQQLDGLGFVWDVHEERFLKFYNVVWHYAQLEQCGPFSPGERTQVLKVPAQYVVPCEDPQWPEAFWGYPLGVKCHAVRQKGLYVKKHPERRRLLEELGFRWTGNSNLGWLEVVHAAAIYSKLHNRSLDVPIKFVVPKPDEWTEVEWPWPEHLWGLPLGQRLKDIRLKGAYVKGPKKEERIRQLETLGFY 334
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A448YWN7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWN7_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.000e-55 Identity = 122/345 (35.36%), Postives = 177/345 (51.30%), Query Frame = 1 Query: 1 QHGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVP-EGGPWPLCCQGMRLGARVSGVRNQSLYV----RTDVARWYQLDAMGFVWDLTDAPFRQVHDALLQY--------KAEH-GNLNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAK-ASYVNVVRALKAYRKVKGRDLSVPSSFVLPS----------------------------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLGVFAQSR 906
+H +L++ + +V+P E G L Y MR+W+RH++++P R EL +GFVW RLQ E+NL +E+L+ YK + GS LVP +F VP + WP C G+ LG V +RN+ Y+ ++R QLDA+GFVWD+ + F + AL Y ++ H G L VP F VP+S W D+WG LG+R +R K YI+ P+R+R+L GF + ++ VV A Y ++ L VP+ FV+P+ PWP W LG L DIR KG YLKG++G+ RR +L+ LG + R
Sbjct: 174 EHSHLVIPRRFVVP--ESSSYPSVWHGIDLAGTVYTMRWWQRHVKNQPDRVSELNRIGFVWERLQPEWNLILESLIIYKAIFGSTLVPSTFVVPNDDNRWPKACWGISLGNSVYKIRNRGDYLGARNSNSLSRRAQLDAIGFVWDVQELRFSKFTTALELYGKVEQHHQESNHSGALKVPSKFVVPRSSRWPTDMWGYPLGERCTQVRQKELYIKGHPDRVRILADLGFYTSGGNNNLRWLEVVHAAAVYSQMNNNQLDVPTKFVVPAPPRXXXXXXXXXXXXXDSGASRLVGSDDAWPWPEYLWNFPLGQRLRDIRVKGNYLKGENGDARRRQLDALGFNWEPR 516
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A7S1G2X8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2X8_9STRA) HSP 1 Score: 204 bits (519), Expect = 4.810e-55 Identity = 121/342 (35.38%), Postives = 174/342 (50.88%), Query Frame = 1 Query: 4 HGNLLLTQNYVMPC-------DEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEGGP-WPLCCQGMRLGARVSGVRNQSLYVRTDVARWYQLDAMGFVWDLTDAPFRQVHDALLQYKAEHGN-----------LNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKASYVNVVRALKAYRKVKGRDLSVPSSFVLPS----------------------------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLG 888
HG+L + + Y++P +++ +E G L + Y MR+W+RH+R + R EL LGF+W RLQ E+NL VEALL YK V G L+VP SF VP G WP G+ LG V +R++ +V + R QL+ M FVWD+++ F++ AL Y+ + L VP F +P + PW +++ G LG + +R K YI+N PER + L + GF++ + V+ A Y ++ GR L VP SFV+PS + PW WG LG L DIR KG YLKG + +ER A+L+ LG
Sbjct: 127 HGDLAIPRRYIVPTSDIVVTTNDKIDFPQEWHGRYLAETVYKMRWWQRHVRSQSQRVAELNELGFIWERLQSEWNLVVEALLTYKNVYGDLMVPLSFIVPHGDEYWPAATWGIGLGNIVYRIRSRQGFVAGNPERIDQLNGMDFVWDVSEYLFQKFVLALKIYRKDGRKSASPKNVRFNVLQVPSKFIIPPNEPWPEELHGYPLGDKCTAVRQKELYIKNSPERRKTLEELGFQFGGNTSVGWHTVMHAAAIYSQINGRILDVPQSFVVPSPPPPLGSTCSSSHDGADSDKWSLLHDDHWWPWSEYLWGFPLGQRLKDIRIKGMYLKGNNAKERIAQLDGLG 468
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: K0R3Q0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3Q0_THAOC) HSP 1 Score: 201 bits (511), Expect = 1.530e-54 Identity = 119/333 (35.74%), Postives = 173/333 (51.95%), Query Frame = 1 Query: 4 HGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDM-RFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEGGPWPLCCQGMRLGARVSGVRNQSLYVRTDVA--RWYQL--------------------DAMGFVWDLTDAPFRQVHDALLQYKA---EHGNLNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADA-AKASYVNVVRALKAYRKVKGRDLSVPSSFVLPS-----------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLG 888
HG+L++ +N+V+P E E G RL Y RFW +HI +R R +L LGF+W RLQ E+NLF+EAL YK + G +LVP F VP G W C + LG+ V +R + Y+ D + R QL D +GFV+D+++ F + A+ ++A + + +P F VP+ W +++W LG R L +R K Y++ P+R R L + GF D AK ++ VV+A Y ++ + L+VP +FV+P PWP WGL+LG L D+R KG YLKG D RRA+L +LG
Sbjct: 67 HGDLVIPRNFVVPASNEY--PVEWHGVRLSAYVYTRHRFWSKHIAERKDRAAQLGKLGFLWERLQPEWNLFIEALSVYKAIHGDVLVPAKFVVPRSGEWSKACWELPLGSTVQRIRIRHDYLTGDNSYERRLQLGKEETRFIVCVFSFLPEPEPDRLGFVYDVSEVKFDKFLTAVKYFRAIKRQRSTVRIPSKFVVPREKGWPEELWDYPLGARSLAVRQKQLYVKGRPDRQRDLEEVGFMLQDGNAKLGWLAVVQAAAIYSQMHNKVLNVPLNFVVPGPPLDADVNCYENWPWPRRLWGLKLGQRLKDVRQKGAYLKGSDAGIRRAQLNQLG 397
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A1E7FAY6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAY6_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.540e-54 Identity = 115/322 (35.71%), Postives = 173/322 (53.73%), Query Frame = 1 Query: 1 QHGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVP-EGGPWPLCCQGMRLGARVSGVRNQSLYVRTD----VARWYQLDAMGFVWDLTDAPFRQVHDALLQY---KAEHGNL--NVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKAS--YVNVVRALKAYRKVKGRDLSVPSSFVLPS--------------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLG 888
+H +L+L + Y +P + G L Y+MR+W+ HI+++P R EL +GFVW RLQ E+NL +E+L+ YK + G++LVP +F VP + W C G+ LG V +RN+ ++ + +R QLDA+GFVWD+ + F + AL + + H + VP + VP+S W ++WG LG+R IR K YI+ P R+++L GF + + ++ VV A Y ++ L VPS FV+P+ PWP WG+ LG L DIR KG YLKGK+ + RR +L+ LG
Sbjct: 26 EHSHLVLPRRYPVPNTACYPSIWH--GLDLAGTVYNMRWWQEHIKEQPDRVSELNKMGFVWERLQPEWNLILESLIMYKALNGNVLVPSNFTVPHDDDRWSKACWGISLGNSVYKIRNRGDHLSGNNPNAFSRRKQLDAIGFVWDVQELRFTKFCIALQLFGRIEQHHDTIAVKVPSQYIVPRSSRWPNELWGYRLGERCTQIRQKELYIKGHPHRLKILADYGFYITGGSNNNLRWLEVVHAAAVYSQMNNNSLDVPSKFVVPAPPRRIASLVVGSDDAWPWPECLWGVPLGQRLRDIRVKGNYLKGKNSDARRQQLDALG 345
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: A0A7S4EQH0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQH0_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.640e-51 Identity = 115/339 (33.92%), Postives = 170/339 (50.15%), Query Frame = 1 Query: 1 QHGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVP-EGGPWPLCCQGMRLGARVSGVRNQSLYV----RTDVARWYQLDAMGFVWDLTDAPFRQVHDALLQY--------KAEH-GNLNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAK-ASYVNVVRALKAYRKVKGRDLSVPSSFVLPS----------------------------FLPWPPSCWGLRLGTALVDIRSKGRYLKGKDGEERRAELERLG 888
+H +L+L + + +P + G L Y MR+W+RH++++P+R EL +GF+W RLQ E+NL E+L+ YK + G++LVP +F VP + WP C G+ LG V +RN+ Y+ +R QLDA+GFVWD+ + F + AL Y ++ H G L VP F +P+S W +WG LG+R +R K YI+ R+++L GF + ++ VV A Y ++ + L VP+ FV+P+ PWP W LG L DIR KG YLKGK G RR +L+ LG
Sbjct: 174 EHSHLVLPRRFPVPTSSSYPSIWH--GIDLAGTVYTMRWWQRHVKNQPNRVSELNRIGFIWERLQPEWNLIFESLIIYKALYGNILVPSTFVVPNDDDRWPKACWGISLGNSVYKIRNRGDYLGGINNNSHSRREQLDALGFVWDVQELRFSKFSTALELYGKIEQKQQRSSHSGALKVPSQFVIPRSSRWPTSLWGYRLGERCTQVRQKELYIKGHAHRVKILADLGFYLSGGNNNLRWLEVVHAAAVYSQMNDKKLDVPTKFVVPAPPRRVAASPKDDENERDPGPSRVVGSDDAWPWPEYLWEFPLGQRLRDIRVKGNYLKGKSGGARRKQLDALG 510
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Match: B7FSS3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSS3_PHATC) HSP 1 Score: 187 bits (475), Expect = 4.860e-49 Identity = 108/297 (36.36%), Postives = 162/297 (54.55%), Query Frame = 1 Query: 4 HGNLLLTQNYVMPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGRLQDEYNLFVEALLAYKEVEGSLLVPHSFAVPEG-GPWPLCCQGMRLGARVSGVRNQSLYVRTDVA--RWYQLDAMGFVWDLTDAPFRQVHDALLQY-KAEHG---------NLNVPVAFCVPQSPPWHQDIWGLALGQRVLDIRAKHRYIRNDPERIRLLNKAGFRWADAAKASYVNVVRALKAYRKVKGRDLSVPSSFVLPS---------FLPWPPSCWGLRLGTALVDIRSK 828
HGNL++ + Y +P ++ E G L YDM++W+R+++ +P R EL LGFVW RLQ E+NL +EAL+ Y+ + G+LLVP S+ VP+G W + LG V +R++S ++R D A R QLD +GFVWD + +R + AL Y K E ++++P + VP W ++WG LG + + +R K Y+++ PER ++L K GF W A ++ VV A Y ++ R L VP F +P+ PWP WGL LG L D+R+K
Sbjct: 153 HGNLVIPRRYRVPYTKDY--ANEWHGVDLST-IYDMKWWQRNVKSKPDRVAELNQLGFVWERLQPEWNLILEALITYRTLYGNLLVPSSYVVPQGDNRWSKATWKIPLGNCVYRIRSRSDFLRDDNAGSRRDQLDGLGFVWDAQERRYRIFYAALRHYAKLEKCGAFSVGRSISISIPSNYIVPSEDLWPNELWGYPLGAKCIAVRQKDLYVKDKPERKQMLQKLGFHWGGNADLGWLRVVHAAAIYSRMHDRYLDVPYHFKVPAPSTTEHDGQEWPWPEHLWGLPLGQRLKDVRTK 446 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16988.1 >prot_C-linearis_contig95.16988.1 ID=prot_C-linearis_contig95.16988.1|Name=mRNA_C-linearis_contig95.16988.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=586bp MPCDEEGGGVREHRGWRLGQKAYDMRFWKRHIRDRPSRREELAALGFVWGback to top mRNA from alignment at C-linearis_contig95:364992..371437+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig95.16988.1 ID=mRNA_C-linearis_contig95.16988.1|Name=mRNA_C-linearis_contig95.16988.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6446bp|location=Sequence derived from alignment at C-linearis_contig95:364992..371437+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig95:364992..371437+ >mRNA_C-linearis_contig95.16988.1 ID=mRNA_C-linearis_contig95.16988.1|Name=mRNA_C-linearis_contig95.16988.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3516bp|location=Sequence derived from alignment at C-linearis_contig95:364992..371437+ (Chordaria linearis ClinC8C monoicous)back to top |