mRNA_C-linearis_contig95.16984.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: D7FRC9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC9_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.070e-69
Identity = 148/312 (47.44%), Postives = 188/312 (60.26%), Query Frame = 2

Query: 1304 SVAPDDAGVFLLESFQKDGMYRVLRNWEEGNIGLRRVEDSCRVVLSEMVKALDVNEPATAMDTARTETSRGHEGGFDGGPNAMESAALILSRLGRVRLPRIAEAVSAKLNLEELQGLTSVVMVGGFAGSVHVQEVVEKRVEDKYPDKSVKMVTPEKNPDLAIVQGAARYVGSLGSGLKHPTSAPQFTAVNCDLSYGILASEPGSWHAAVFDAYLLKGKGYPHGHT----------------------------------------IT-----PVPGQRWGMCC-RRGSSAVKQGEKSAKDAETPVVVEFTVM 2101
            SVAP  AG F LESF++DGMY+VL+NWEE  +GL   +  CR+ +SEMV+AL V++PA AMDTAR +T+ G +    G    +     +L+R  R +  RIA AVS KL  EEL+GL SVVMVGGFAGS+HVQ  V K V ++YP+KSV++V    +PDLA+VQGAA YVG LG   K+PTSAP+   + C  SYGIL S  G+W A  F+A LLKG+ YP+GHT                                        IT     PVPG  W MCC RR +SAV+Q E   K+ ETP+ VEFT++
Sbjct:  157 SVAPR-AGHFQLESFERDGMYKVLQNWEEAKVGLSVDKPECRIDMSEMVEALGVSQPAMAMDTARKKTNNGGQDLVGGSGTELVLKPALLTRFFRTQCDRIAGAVSEKLKTEELRGLKSVVMVGGFAGSMHVQAAVRKSVLEEYPNKSVQVVVAT-SPDLAVVQGAALYVGPLGPRPKYPTSAPEMNGITCGSSYGILTSGRGTWDAKFFEAVLLKGEAYPNGHTKDFDYTVGSDCKLAFGSCGASEVKEGRNRLDSIGGIGAVHITVSETIPVPGG-WDMCCCRRSTSAVEQDENGIKEGETPIKVEFTII 465

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BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: D7FSN9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN9_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 4.840e-37
Identity = 177/574 (30.84%), Postives = 247/574 (43.03%), Query Frame = 2

Query:  338 EDYVVAIGLGTSCTACSWRRAAD-AAVFVEVPDTIVRIEDVRGKTPTVLLIRGKLDPHREKAFEHAGVEALGRGAESRSREEKKGIPYNAQLFQRFKMV----------RWSCRCQHLLLTVLLVRRRRGFLMILHSDYWVDDLGSGELHRKNRKATTDKTCTTQRPPVSPGWPS*SCGTRSSSPSSTSKTSLWRTWLGRVCNPKAFRGC*PSLHAARLRRKALCGMLPSNPASSKAKTMGSTLSYAPSLWPLASRSGPTWTGQLATPTCMCNMLFLTLLATHRRTTFASAARFSSTKSTRRASNKWETPSARREVQRTWTINSRPSS*ASLGSVAPDDAGVFLLESF-QKDGMYRVLRNWEEGNIGLRRVEDSCRVVLSEM------VKALDVNEPATAMDTARTETSRGHEGGFDGGPNAMESAALILSRLGRVRLPRIAEAVSAKLNLEELQGLTSVVMVGGFAGSVHVQEVVEKRVEDKYPDKSVKMVTPEKNPDLAIVQGAARYV------GSLGSGLKHPTSAPQFTAVNCDLSYGILASEPGSWHA-AVFDAYLLKGKGYPHGHTIT 1984
            +D+VVAI LGTSCTA SW+   D A   + VPD     ED+ GK+PT LLI G      +K F   G EA GR  E++ R     IP+ AQLF+RFKM+            S + + +L+ +        F++ L     V  +G    H  + +  T         PV    P+      +++ +   K       L     P A      +    R+R K L  ++     +          S  PSL  L   SG  W                                                      V R +    +      + SVA  +AG   LESF      YR+ + WE   IGLR V+  CR+ LSE+      V   +++E     +   TE   GH G FD     +     +L +  + +   I+ AVS +L    LQGL++VVMVGGF+GS+HVQE V   V  KYPD SV++  P K+PDLAIV+GAA +V      G++G G +   +AP+F AV    SYGI+ SE G     A FD + LKG+GY   H +T
Sbjct:    2 KDFVVAIDLGTSCTAFSWKSIVDPAGPSIGVPDMKPN-EDIIGKSPTTLLIAGSTGS--DKMFRPTGAEAYGR--EAQHRYANGDIPHGAQLFKRFKMIYDDLVDAVTKSTSRKAEMMLMDI--------FVIALEYIKSVALMGMTLTHAVSAEDVTWVLTV----PVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYL--VIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGST--------------------------------------------------NVDRLFEAYLKDF----VLSVA-QEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEFVGGH-GTFD-----LVLRPALLRKFFKEQCKNISGAVSEQLERPHLQGLSAVVMVGGFSGSMHVQEAVRACVARKYPDGSVEVSIP-KSPDLAIVEGAAHFVSAPPASGAVGPGGQQLPAAPRFAAVTSANSYGIVVSETGGGVVPAFFDPFFLKGQGYEMNHMVT 494

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BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: A0A6H5JT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT12_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.480e-30
Identity = 100/238 (42.02%), Postives = 134/238 (56.30%), Query Frame = 2

Query: 1304 SVAPDDAGVFLLESF-QKDGMYRVLRNWEEGNIGLRRVEDSCRVVLSEMVKA-LDVNEPATAMDTARTETSRGHEGGFDGGPNAMESAA--LILSRLGRVRLPRIAEAVSAKLNLEELQGLTSVVMVGGFAGSVHVQEVVEKRVEDKYPDKSVKMVTPEKNPDLAIVQGAARYV------GSLGSGLKHPTSAPQFTAVNCDLSYGILASEPGSWHA-AVFDAYLLKGKGYPHGHTIT 1984
            SVA  +AG   LESF      YR+ + WE   IGLR ++  CR+ LSE+ +  L+V +    MD  R   + G    F GG    E      +L +    +   I+ AVS +L    LQGL++VVMVGGF+GSVHVQE V   V  +YPD SV++  P K+PDLAIV+GAA +V      G++G   +   +AP+F AV    SYGI+ SE G     A FD + LKG+GY   HT+T
Sbjct:  245 SVA-QEAGARALESFFASSASYRINQAWERAKIGLRSLDHDCRIDLSELSREPLEVTKDE--MDEGRRLKNIGGTE-FVGGHGTFELVLRPALLRKFFNNQCENISGAVSEQLERPHLQGLSAVVMVGGFSGSVHVQEAVRACVARRYPDGSVQVSIP-KSPDLAIVEGAAHFVSAPLPSGAVGLDGQQLPAAPRFAAVTSANSYGIVVSETGGGVVPAFFDPFFLKGQGYEMNHTVT 477

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BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: A0A6H5JYS2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS2_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.220e-12
Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 2

Query:  332 GDEDYVVAIGLGTSCTACSWRRAAD-AAVFVEVPDTIVRIEDVRGKTPTVLLIRGKLDPHREKAFEHAGVEALGRGAESRSREEKKGIPYNAQLFQRFKM 628
            G++++VVAI LGTSCTA SW+  AD A   + VPD     +D+ GK+PT LLI G     R   F   G EA GR  E++ R     IP+ AQLF+RFKM
Sbjct:   34 GEKEFVVAIDLGTSCTAFSWKSLADPAGPSIGVPDMKPN-DDIIGKSPTTLLIAGSTGSDR--MFRPTGAEAYGR--EAQRRYAIGDIPHGAQLFKRFKM 128

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BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.110e-12
Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1

Query:  853 VALEHIKDVALENLARSG---VQPKSVSWVLTVPACCTPAAQSFMRDASIKSGLIEGEDDGEHLVVCSEPVAACLALWPD----LDWTVGNTYMYVQYAVFDAVGDPSPYNICQRCAFQLDKVDPPSLEQVGDTISEA*GSTYVDDQFEAFL 1287
            +ALE+IKDV +  L  +    ++   + WVLTVPA  +   ++FMR A++++GLI+ E+D EHL +C EP AACL +         W  G   M     V D  G              + ++DP  LE++ +      GST  D +F+ F+
Sbjct:  135 LALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVM-----VLDCGG-----GTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFI 276

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BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.310e-9
Identity = 50/157 (31.85%), Postives = 76/157 (48.41%), Query Frame = 1

Query:  853 VALEHIKDVALENLARSG---VQPKSVSWVLTVPACCTPAAQSFMRDASIKSGLIEGEDDGEHLVVCSEPVAACLALWPDL----DWTVGNTYMYVQYAVFDAVGDPSPYNICQRCAFQLDKVDPPSLEQVGDTISEA*GSTYVDDQFEAFLMSFAR 1302
            +ALE+IKDV +  L ++    ++   + WVLTVPA  +    +FMR A++++GLI+ E+D EHL +C EP AACL +         W  G   M     V D  G              +   +P  LE++ +      GST  D +F+ F+    R
Sbjct:  135 LALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVM-----VLDCGG-----GTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLR 281

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BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Match: A0A6H5JDD7_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDD7_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 5.610e-7
Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 2

Query: 1310 APDDAGVFLLESF-QKDGMYRVLRNWEEGNIGLRRVEDSCRVVLSEMVK-ALDVNEPATAMDTARTETS-RGHE--GGFDGGPNAMESAALILSRLGRVRLPRIAEAVSAKLNLEELQGLTSVVMVGGFAGSVHVQEVVEKRVEDKYPDKSVKMVTPEKNPDLAIVQGAARY 1810
            A   AG   + SF       R+++ WE   +G +   D CR+ L+E+    L+V      MD AR + +  G E  GG+  G + +      + +  +  +  I++AV+ +L+  ELQG+ SVVMVGGF+ +  VQE +   V +K P   V ++   + P LAI +GA  +
Sbjct:  284 AASGAGKRAITSFLNSSAKLRIMQAWETSKVGWKDKNDECRIDLTELGNYPLEVT--MEDMDRARDDKNGHGEELVGGY--GTSVLVLKPAWMRKAFQQPIESISQAVAEQLDEPELQGVKSVVMVGGFSENFLVQEAIRTCVLEKRPRADVHVLVHAR-PGLAIAEGATFF 450

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot

BLAST of mRNA_C-linearis_contig95.16984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FRC9_ECTSI	1.070e-69	47.44	Heat shock protein 70-putative n=1 Tax=Ectocarpus ...	[more]
D7FSN9_ECTSI	4.840e-37	30.84	Heat shock protein 70-putative n=1 Tax=Ectocarpus ...	[more]
A0A6H5JT12_9PHAE	1.480e-30	42.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYS2_9PHAE	3.220e-12	48.00	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K4X7_9PHAE	4.110e-12	32.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G266_ECTSI	2.310e-9	31.85	Heat shock protein 70 n=1 Tax=Ectocarpus siliculos...	[more]
A0A6H5JDD7_9PHAE	5.610e-7	31.40	Protein kinase domain-containing protein n=2 Tax=E...	[more]