mRNA_C-linearis_contig95.16975.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig95.16975.1
Unique NamemRNA_C-linearis_contig95.16975.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: D7FNE6_ECTSI (NADH-cytochrome b5 reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNE6_ECTSI)

HSP 1 Score: 502 bits (1292), Expect = 1.030e-170
Identity = 254/295 (86.10%), Postives = 271/295 (91.86%), Query Frame = 3 
Query:   87 QDPQVIVALVAVAVTFLVIVLSSIRQKKIALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRRDDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            QDPQV +ALV+VAVTFLVI++SS +QKKIALQPEVY PFRLQEK ELSHDTRMFRFALQSPKHVLGLP GQHVSMKFVD ADGK VTRSYTPTSSD+N+GHVDFVIKVYRPN  PKFPDGGKMSMHLERL+IGDTVDMRGPKG+LTY G+GNF IRRRDDRQVRKLGMMAGGTGITPMLQVISA+MRE G  G   +EMSLIFANKSEDDILLR MIEK+AA NPNFKFH+TLDT P GW HSQGFI+KEMV +HMP PGADTLILMCGPPPMLKFAC+PALEALGFSEDMHFSF
Sbjct:    3 QDPQVTLALVSVAVTFLVIIVSSAKQKKIALQPEVYAPFRLQEKVELSHDTRMFRFALQSPKHVLGLPIGQHVSMKFVD-ADGKIVTRSYTPTSSDINLGHVDFVIKVYRPNEHPKFPDGGKMSMHLERLKIGDTVDMRGPKGNLTYLGTGNFSIRRRDDRQVRKLGMMAGGTGITPMLQVISAIMRE-GSTG--LVEMSLIFANKSEDDILLRDMIEKLAASNPNFKFHYTLDTVPEGWAHSQGFISKEMVEKHMPPPGADTLILMCGPPPMLKFACVPALEALGFSEDMHFSF 293
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: A0A835ZPK9_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPK9_9STRA)

HSP 1 Score: 359 bits (922), Expect = 6.220e-115
Identity = 180/291 (61.86%), Postives = 224/291 (76.98%), Query Frame = 3 
Query:  102 IVALVAVAVTFLVIVLSSIRQK-KIALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRRDDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            I A++A  V   +++L  ++ K K+AL    Y PF LQEK+ +S DTR+FRFALQS KHVLGLP GQH+S+KF+D A GK VTRSYTPTSSD  VG+VDFVIKVY PN  PKFPDGGKMS HL  L++GDT+DM GPKGSL Y G G F IR+R+DRQV+++GM+AGGTGITPMLQ+++A+ +E      S IE+SLIFAN+SE DILLR MIE     + NF++HFT+D    GWT S GFIT +M+ EH+P PG DTLILMCGPPPM+KFAC+  LE L +++DM+FSF
Sbjct:   26 IAAVLAATVAIALVLLGGVKAKPKLALSKSEYRPFVLQEKQNISRDTRLFRFALQSAKHVLGLPIGQHISLKFIDGA-GKMVTRSYTPTSSDDEVGYVDFVIKVYFPNEHPKFPDGGKMSYHLHDLKVGDTIDMMGPKGSLEYKGKGLFSIRKREDRQVKRIGMLAGGTGITPMLQIMNAIRKE-----NSNIELSLIFANQSEQDILLRDMIEAFPMKHANFRYHFTVDRPSEGWTGSVGFITADMIQEHLPPPGDDTLILMCGPPPMVKFACIANLEKLKYTDDMYFSF 310
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: A0A7S2V3I9_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3I9_9STRA)

HSP 1 Score: 324 bits (830), Expect = 3.410e-101
Identity = 174/305 (57.05%), Postives = 218/305 (71.48%), Query Frame = 3 
Query:   78 EFIQD-PQVIVALVAVAVTFLVI-VLSSIRQKK--IALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRRDD---RQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            + +QD   V+VAL  V +T +++ +L+ +R K+  +AL PE Y  F L EKEELSHDTR FRF LQSP H+LGLP GQH+S KF  K +GK VTRSYTPTSSD   G+VDFVIKVY  N  PKFP GG MS HLE L IGDT++MRGPKG LTY G G   I +R +   R  R++GM+AGGTGITPMLQV+SA+++E     +S +++ L+FAN++ DDIL+R  +E M   N N +  +TLD  PAGW  S GF+  EMV +HMPEPG DT ILMCGP PM+K AC PAL+ LG++EDM F F
Sbjct:   17 DLLQDNTAVVVALAVVLLTSILLGLLALVRGKRGPVALDPEKYISFPLIEKEELSHDTRRFRFGLQSPDHILGLPIGQHISFKFQTK-EGKIVTRSYTPTSSDDEKGYVDFVIKVYFANKHPKFPAGGLMSQHLESLNIGDTIEMRGPKGHLTYKGHGKMAIAKRGEVETRYARQIGMIAGGTGITPMLQVMSAIVKE-----KSRVDIWLLFANQTADDILVRSELEGMLKDNTNIRLWYTLDRPPAGWPFSTGFVDAEMVKKHMPEPGPDTQILMCGPGPMIKMACEPALKELGYTEDMQFVF 315
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: A0A6V1RBP2_HETAK (NADH-cytochrome b5 reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBP2_HETAK)

HSP 1 Score: 321 bits (822), Expect = 6.800e-100
Identity = 167/301 (55.48%), Postives = 217/301 (72.09%), Query Frame = 3 
Query:   75 LEFIQDPQVIVALVAVAVTFLV--IVLSSIRQKKIALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRRDD---RQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMH 962
            ++   DP V++ +  V +T LV  +++    +KK AL PE + P +L +K EL+HDTR F FALQ+P+ VLGLP GQH+S +F D  +GK   RSYTPT+ +  +G V+FVIKVY  N  PKFP+GGKMS HLE L+IGDT++MRGPKG L Y GSGNF +++  D   + V K+GMMAGGTGITPMLQVI A+++E  G     IEMSL+FAN+SEDDILLR  ++++A  + NFK  +T+D  P  WT S+GFI K+MV +HMP+P  DTLILMCGP PM+K ACLPAL+ LGF E  H
Sbjct:   25 MDVFTDPGVLMGVGVVILTVLVFFVLMKISNKKKNALDPEKFIPLKLIDKVELTHDTRRFVFALQTPETVLGLPIGQHISFRFKD-GEGKVCQRSYTPTTGNDTLGRVEFVIKVYFANKHPKFPEGGKMSQHLESLKIGDTLEMRGPKGHLDYKGSGNFTLKKLTDVTEKTVTKVGMMAGGTGITPMLQVIKAILKEGSG-----IEMSLLFANQSEDDILLRADLDELARKHANFKVWYTVDRPPKHWTFSEGFINKKMVDDHMPKPADDTLILMCGPGPMVKMACLPALKELGFDEKKH 319
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: A0A7S4KD78_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KD78_9STRA)

HSP 1 Score: 307 bits (787), Expect = 1.190e-94
Identity = 161/301 (53.49%), Postives = 208/301 (69.10%), Query Frame = 3 
Query:   90 DPQVIVALVAVAVTFLVIVLSSIRQKKIALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRR----DDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPN-FKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGAD--TLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            D  V  A+ AV    +  +L   R+   A++ + + PFRL EKEE+SHDTR F FALQ+PK +LGLP GQH+S++F DK DGK   RSYTP S D   G V FVIKVY+  V PKFPDGGKMS HL+ L IGDTVDMRGPKG LTY G G F +++      +R  +  GM+AGGTGITP LQVI A++R++     +T  +SL++AN++E+DIL+R  +E +   +P+ FK H+TLD  P+GW +S GF+TK+M+  + P    D  T ILMCGPPPMLKFAC+PAL+ LGF ED  FSF
Sbjct:   32 DALVFAAVTAVIAAAVAAILLFARKPSAAMKADEFQPFRLIEKEEISHDTRKFTFALQTPKKLLGLPVGQHISLRFTDK-DGKNHQRSYTPVSGDETPGTVTFVIKVYKAGVHPKFPDGGKMSQHLDSLSIGDTVDMRGPKGHLTYLGQGKFTVKQMRKPLSERCAKHFGMIAGGTGITPCLQVIHAILRDSKD---TTTTVSLLYANQTEEDILVRDELETIVKEHPDRFKLHYTLDHPPSGWKYSSGFVTKDMIEANFPSAAKDGSTQILMCGPPPMLKFACIPALKELGFKEDEWFSF 328
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: W4GES2_9STRA (NADH-cytochrome b5 reductase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GES2_9STRA)

HSP 1 Score: 298 bits (762), Expect = 3.740e-91
Identity = 154/273 (56.41%), Postives = 190/273 (69.60%), Query Frame = 3 
Query:  171 IALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRR------DDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            I L+P      +L EKE LSHDTR FRFAL S  HVLGLP GQH+S++F D  DGK V RSYTP SSD  VG+VD V+K+Y  NV PKFPDGGKMS HL+ L IGDT+++ GPKG LTY G G F I+ R      D R+ +K+GM+AGGTGITPMLQVI    R A      T E S++FAN++EDDIL R  +++M    PN K  +T+D A   W +S GF+TKEM+ +H+   G DT I +CGPPPMLKFA +PALE LGF+ DM+F+F
Sbjct:   48 ITLKPNSTVHLKLVEKESLSHDTRRFRFALPSEHHVLGLPVGQHISLRFTDD-DGKLVMRSYTPVSSDDAVGYVDLVVKIYFKNVHPKFPDGGKMSQHLDALPIGDTIEVSGPKGKLTYKGLGVFEIKHRVNDTNVDVRKAKKIGMIAGGTGITPMLQVI----RYALANPNETTEFSILFANQTEDDILCRAELDQMTKNFPNVKVWYTVDRASDSWKYSTGFVTKEMIDKHLFGAGPDTQIFLCGPPPMLKFAVVPALEELGFTPDMYFAF 315
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: A0A485L3J1_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3J1_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.150e-90
Identity = 148/273 (54.21%), Postives = 193/273 (70.70%), Query Frame = 3 
Query:  171 IALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRR------DDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            + L+P+     +L EKE LSHDTR FRFAL S KHVLGLP GQH+S++F D+ +GK V RSYTP SSD  +G+VD V+K+Y  NV PKFPDGGKMS HLE L++GD +++ GPKG LTY G G F I+ R      + R+ +K+GM+AGGTGITPMLQVI   ++      + T E S++FAN++EDDIL R  +E+MA  +PN K  +T+D     W +S GFI K+M+ +H+   G D  I +CGPPPMLKFA LPALE LGF+ +MHF+F
Sbjct:   41 VTLKPDETVMLKLIEKETLSHDTRRFRFALPSEKHVLGLPVGQHISLRFTDE-EGKLVMRSYTPVSSDDVLGYVDLVVKIYFKNVHPKFPDGGKMSQHLESLKLGDAIEVSGPKGKLTYKGLGVFTIKHRVKDTTVETRKAKKIGMVAGGTGITPMLQVIRYALQNP----KETTEFSILFANQTEDDILCRAELEQMAKDHPNVKVWYTIDRPTESWKYSSGFINKQMLQDHLFPAGDDVQIFLCGPPPMLKFAVLPALEELGFTPNMHFAF 308
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: D0NRY2_PHYIT (NADH-cytochrome b5 reductase n=18 Tax=Phytophthora TaxID=4783 RepID=D0NRY2_PHYIT)

HSP 1 Score: 295 bits (754), Expect = 5.620e-90
Identity = 153/271 (56.46%), Postives = 185/271 (68.27%), Query Frame = 3 
Query:  177 LQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRR------DDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            L P V+ P  L EK  LSHDTR FRFAL SP+H+LGLP GQH+S++F D  +GK V RSYTP SSD   G+VD VIKVY  NV PKFPDGGKMS HLE L +GDT+++ GPKG L+Y G G   IR R      + R+  K+GM+AGGTGITPMLQVI   +++         E  L+FAN++E DIL R  IE MAA + N KF +T+D A  GW +S GF+T +M+ +H+P    D  I MCGPPPMLKFA LPALE LGF  D HFSF
Sbjct:   52 LPPTVHLP--LVEKHSLSHDTRRFRFALPSPQHILGLPVGQHISLRFKDN-EGKLVMRSYTPVSSDDTKGYVDLVIKVYFKNVHPKFPDGGKMSQHLESLAVGDTIEVSGPKGKLSYMGKGEIHIRHRVRDVVPEVRKATKIGMIAGGTGITPMLQVIRRALQDP----EDKTEFYLLFANQTEADILCREEIEGMAANHTNVKFWYTVDKATDGWKYSTGFVTADMIKKHLPAAAPDVQIFMCGPPPMLKFAVLPALEELGFKPDQHFSF 315
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: UPI0010FCBB4E (NADH-cytochrome b5 reductase 3-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FCBB4E)

HSP 1 Score: 291 bits (744), Expect = 1.160e-88
Identity = 150/296 (50.68%), Postives = 202/296 (68.24%), Query Frame = 3 
Query:   99 VIVALVAVAVTFLVIVLSSIRQKKIALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRR--RDDRQVRK---LGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHFSF 971
            V++  VA  V   +  +   +++ +AL P    PF+L +K+ +SHDTR FRF LQSP+H LGLP G H+ +    K DGK V R YTP +SD  +G+ + VIKVY  NV PK+PDGGKMS +L+ L++GDTVD+RGP G LTY G G F I+   +D  QVR+   +G++AGGTGITPMLQ+ISAV+++AG        ++L+FAN++E DIL+R  +E +A    NFK  +TLD  P GW +S GFI   M+ E MP PG DT ILMCGPPPM+ +AC+P LE LG++ DM+F F
Sbjct:   15 VVMVTVAFGVITYLFKMQGSKKRPVALDPNKKIPFKLIDKKIISHDTRRFRFELQSPEHKLGLPVGNHMYLSA--KIDGKLVVRPYTPVTSDDELGYFELVIKVYFKNVHPKYPDGGKMSQYLDLLEVGDTVDIRGPSGKLTYLGRGKFSIKENNKDPVQVRRAKNVGLIAGGTGITPMLQIISAVIKDAG----DNTNLNLLFANQTEKDILVRPELEMLAKECENFKLWYTLDRPPEGWPYSSGFINDSMLKEQMPPPGPDTQILMCGPPPMINYACVPNLEKLGYTPDMYFPF 304
[Close]
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Match: C1FJ74_MICCC (NADH-cytochrome b5 reductase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJ74_MICCC)

HSP 1 Score: 291 bits (745), Expect = 1.580e-88
Identity = 152/290 (52.41%), Postives = 200/290 (68.97%), Query Frame = 3 
Query:  114 VAVAVTFLVIVLSSIRQKKIALQPEVYTPFRLQEKEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPTSSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKGSLTYTGSGNFRIRRRDD-------RQVRKLGMMAGGTGITPMLQVISAVMREAGGMGRSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPA-GWTHSQGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDM 959
            V VA+ +LV  L+   +K  AL P      +L ++ ELSHDT MFRF L +P+H+LGLP GQH+++ + DK DGK   R YTPTSSD++ GHVDFVIKVY PN   +FP+GGK+S H+  L+IGDT+D  GPKG   Y G G F I+R          R+ +K+GM+AGGTGITPMLQV+ AV R+ G       +MSLIFAN++E+DILLR  ++K    + NFK H+T+D  PA GW +  GF+T EM+ +HMP P  DT IL+CGPPPM+KFA +PA E LG+++DM
Sbjct:   40 VIVALIYLVDALAPKAKK--ALDPSKKVALKLVKRTELSHDTHMFRFGLPTPEHILGLPIGQHIALSYTDK-DGKEQGRPYTPTSSDVDKGHVDFVIKVYFPN--ERFPEGGKVSQHMHSLKIGDTLDFSGPKGRYEYRGKGTFAIKRLKSQGGGFEIRKAKKIGMIAGGTGITPMLQVMRAVFRDKG----DKTDMSLIFANQTEEDILLRDELDKCERDHDNFKLHYTVDRPPAKGWRYDTGFVTAEMIKKHMPPPSKDTQILLCGPPPMIKFAIMPAFEQLGYTKDM 320
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE6_ECTSI1.030e-17086.10NADH-cytochrome b5 reductase n=2 Tax=Ectocarpus Ta... [more]
A0A835ZPK9_9STRA6.220e-11561.86NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A7S2V3I9_9STRA3.410e-10157.05NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa ja... [more]
A0A6V1RBP2_HETAK6.800e-10055.48NADH-cytochrome b5 reductase n=1 Tax=Heterosigma a... [more]
A0A7S4KD78_9STRA1.190e-9453.49NADH-cytochrome b5 reductase n=1 Tax=Odontella aur... [more]
W4GES2_9STRA3.740e-9156.41NADH-cytochrome b5 reductase n=6 Tax=Aphanomyces a... [more]
A0A485L3J1_9STRA1.150e-9054.21NADH-cytochrome b5 reductase n=1 Tax=Aphanomyces s... [more]
D0NRY2_PHYIT5.620e-9056.46NADH-cytochrome b5 reductase n=18 Tax=Phytophthora... [more]
UPI0010FCBB4E1.160e-8850.68NADH-cytochrome b5 reductase 3-like n=1 Tax=Acropo... [more]
C1FJ74_MICCC1.580e-8852.41NADH-cytochrome b5 reductase n=1 Tax=Micromonas co... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:248523..256515 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score508.1
Seed ortholog evalue2.9e-141
Seed eggNOG ortholog2880.D7FNE6
KEGG koko:K00326
KEGG ReactionR00100
KEGG Pathwayko00520,map00520
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.cytochrome-b5 reductase activity, acting on NAD(P)H
EggNOG OGsCOG0543@1,KOG0534@2759
Ec32 ortholog descriptionRiboflavin synthase-like beta-barrel
Ec32 orthologEc-22_001440.1
EC1.6.2.2
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons8
Model size2348
Cds size909
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16975.1prot_C-linearis_contig95.16975.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig95 248588..255141 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930813.1240919-UTR-C-linearis_contig95:248522..2485871622930813.1240919-UTR-C-linearis_contig95:248522..248587Chordaria linearis ClinC8C monoicousUTRC-linearis_contig95 248523..248587 +
1690881263.0681136-UTR-C-linearis_contig95:248522..2485871690881263.0681136-UTR-C-linearis_contig95:248522..248587Chordaria linearis ClinC8C monoicousUTRC-linearis_contig95 248523..248587 +
1622930813.2633817-UTR-C-linearis_contig95:255141..2565151622930813.2633817-UTR-C-linearis_contig95:255141..256515Chordaria linearis ClinC8C monoicousUTRC-linearis_contig95 255142..256515 +
1690881263.195849-UTR-C-linearis_contig95:255141..2565151690881263.195849-UTR-C-linearis_contig95:255141..256515Chordaria linearis ClinC8C monoicousUTRC-linearis_contig95 255142..256515 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930813.136994-CDS-C-linearis_contig95:248587..2486081622930813.136994-CDS-C-linearis_contig95:248587..248608Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 248588..248608 +
1690881263.0821002-CDS-C-linearis_contig95:248587..2486081690881263.0821002-CDS-C-linearis_contig95:248587..248608Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 248588..248608 +
1622930813.1531243-CDS-C-linearis_contig95:250670..2507541622930813.1531243-CDS-C-linearis_contig95:250670..250754Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 250671..250754 +
1690881263.092431-CDS-C-linearis_contig95:250670..2507541690881263.092431-CDS-C-linearis_contig95:250670..250754Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 250671..250754 +
1622930813.1693587-CDS-C-linearis_contig95:251386..2515961622930813.1693587-CDS-C-linearis_contig95:251386..251596Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 251387..251596 +
1690881263.1065958-CDS-C-linearis_contig95:251386..2515961690881263.1065958-CDS-C-linearis_contig95:251386..251596Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 251387..251596 +
1622930813.186804-CDS-C-linearis_contig95:252306..2524051622930813.186804-CDS-C-linearis_contig95:252306..252405Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 252307..252405 +
1690881263.12699-CDS-C-linearis_contig95:252306..2524051690881263.12699-CDS-C-linearis_contig95:252306..252405Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 252307..252405 +
1622930813.2011187-CDS-C-linearis_contig95:252662..2527551622930813.2011187-CDS-C-linearis_contig95:252662..252755Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 252663..252755 +
1690881263.1423018-CDS-C-linearis_contig95:252662..2527551690881263.1423018-CDS-C-linearis_contig95:252662..252755Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 252663..252755 +
1622930813.2150307-CDS-C-linearis_contig95:252968..2531421622930813.2150307-CDS-C-linearis_contig95:252968..253142Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 252969..253142 +
1690881263.157313-CDS-C-linearis_contig95:252968..2531421690881263.157313-CDS-C-linearis_contig95:252968..253142Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 252969..253142 +
1622930813.228934-CDS-C-linearis_contig95:254205..2542951622930813.228934-CDS-C-linearis_contig95:254205..254295Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 254206..254295 +
1690881263.1742647-CDS-C-linearis_contig95:254205..2542951690881263.1742647-CDS-C-linearis_contig95:254205..254295Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 254206..254295 +
1622930813.2457962-CDS-C-linearis_contig95:255003..2551411622930813.2457962-CDS-C-linearis_contig95:255003..255141Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 255004..255141 +
1690881263.1861622-CDS-C-linearis_contig95:255003..2551411690881263.1861622-CDS-C-linearis_contig95:255003..255141Chordaria linearis ClinC8C monoicousCDSC-linearis_contig95 255004..255141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig95.16975.1

>prot_C-linearis_contig95.16975.1 ID=prot_C-linearis_contig95.16975.1|Name=mRNA_C-linearis_contig95.16975.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=303bp
MGALEFIQDPQVIVALVAVAVTFLVIVLSSIRQKKIALQPEVYTPFRLQE
KEELSHDTRMFRFALQSPKHVLGLPTGQHVSMKFVDKADGKTVTRSYTPT
SSDLNVGHVDFVIKVYRPNVEPKFPDGGKMSMHLERLQIGDTVDMRGPKG
SLTYTGSGNFRIRRRDDRQVRKLGMMAGGTGITPMLQVISAVMREAGGMG
RSTIEMSLIFANKSEDDILLRGMIEKMAAGNPNFKFHFTLDTAPAGWTHS
QGFITKEMVSEHMPEPGADTLILMCGPPPMLKFACLPALEALGFSEDMHF
SF*
back to top

mRNA from alignment at C-linearis_contig95:248523..256515+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig95.16975.1 ID=mRNA_C-linearis_contig95.16975.1|Name=mRNA_C-linearis_contig95.16975.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7993bp|location=Sequence derived from alignment at C-linearis_contig95:248523..256515+ (Chordaria linearis ClinC8C monoicous)
ACAAAATCAACTGCGCCAGCAGCGGAGAACTGGTGTCAGAGGCTATTGCA
GAGGGCTCAGGGAATATGGGCGCTCTCGAGTTTATTGTGAGCGTCGCTTT
GGAGGGGTTTCTTGCCTGCTGCATGGTTACTTTGTCCTTCCGTGTGTACA
CAGCATCAGCGTGTGTAGTGTAGCAGAACGACACCAGACAAGTGGGTTGC
CGTGAAGGCGGCTGTTCACCGCGCATGTCAAGAGAGAATGTCGGCATGCA
TGCATCGGTGAAGAGGAAGTCCTCAGTGGTACACCCACCTGGGTAGATGG
AATGATGGAATCCCCCGGCAGATCCAAGTTTCAAATGTTGCCTGCCCGCA
ATCTCGCATACATGGGATGCGCGCATCTCTTATGATAAATAATTCGTGTG
TGGCGACGTCAGGCCCAAGGCGGGGCGATGAGAGTACAGGCAGTCAACCT
AGACCGGTCGATGAGTCGTGTATTAAAGCTTGTGCGGACACCATGCATCA
TGCATCCAGCAGGAAACTCAACCCGGGGCCACGCATTCGATGGTATGCCC
CAAAACCCAATCCCAATTCCATGTACACATCCCCCAAAATATCCCAATAT
CTCACCACATGTCTCTGTATATCTTTCATCCCTGTCACCAAGACAAGTGA
CGTCACGAGTACATATCTCATGTTGTTTGCAGCCTTGTCGAAGAATGCGC
CCAAATAGATACCACACTCGCACACACACAACAGTAGTAGCTCCGACTTC
CACGTATCACATCTGACATCCGGAGAGATTTATTTGAAAGAATCATAAAA
TCAAAGACGGAACCTCCTCACATTATTGTAGAGACGGGACTCCGTGAGAA
TATAACGGTATTCCATACAGTGATGTATTGTTGGTCCGACCGAGTACAAA
AACACCTCACATATCTCATGAAATAAACACCTCCCCTACGCAGCTCTTAT
TGCCACCGGGGCTTGGCTTCGCATGCTCATGACAAAACGGTTGCGATCGA
GGGTACAAATGAGCCCTCTCCGCCGGCTTAGACTAAATGGTCGTGTACAC
TAGTCAGGTGGCGACGCCTGCGCACTAATCGTGCTCACTCACTCCGTGAG
CGGATATTCGGACAATTGGGATTTGTTTGGTGTTGTGGTGTGGAGAGAGG
CAGCTTGACCACGGCGGGCCGCTGATCGAGGATATGATCGATGATATGCT
CCTTGAATACTGCATGTTGTGCATACATATGCGCCACAGAGAGCCATGGT
GCCAATAGATAGGCACAGCAAGCAGCCGGCTGAAGGGCTGAAGATATGCG
TAAATTTCCGTGGGGCAGAGAGTCAGTGACTGCCGTGACGCCATCAACTA
CATGTAGTTTCACAAGCTCTTTCCAACCCCCGCCCCGCCCGGGTAGAAAG
AGAGTGGTCTACTGCTGTGCGCTGTTTTTTATTTTTCGAAATCGCTCGAT
GTTCTCTCCGTGTGTTGCCAAACAATAGCTTTGCATTTTTTTTTTCGTCG
TGACATGTATATCCAGAGTTGGCAGGGGCGGCTTGGCACGCGGGGCATCT
TGCCAGAACATCTGAACCGTGATCACACAGAAGGTTCCTCTCCCTGAGGC
TCCCACCCACCTTCTGCGGTGCTTGCCTGGTAATTTTTAACGCGAGAGAG
TTTCATGGACGATACTCCGTATATATGTATGCTCCCAAAGAATCACACCG
GCGATGTATGTAATAGCACGGAGTGCAGCAGTCGCTGCGCTGGCATTGCC
GACTCATCCCTAACCCAGAAGTCTACGCAGGTTTTACAGTCAGCAAACAT
ATAGGACAGAGTATGGAATTGGCGGAATGGGGGGTTCTGGGGTTAGGGTT
AGGGTTAGGGAACCCCCCCTCTCTATTTCTAGTATAAACTTACTTTCTTC
GCGTCGGCAGTCCCCTAACCCTAGCAGAAAGGCAACAGAAGCCGCCAAAA
TCGGCTCAGTCCATGCTTCTCGGCGACGATGATGTACGTACCCCCCCCGC
ACAACAACAAATGATAACACGGTGTCGCCTACCCTGCGGTGTAGCGTATT
CACGCCTCCCGCTTATCTTCCGCTGTGTTTGTTGTTTGTTGCTTGTTGCT
TGTTGCTTGTTGACTTGATGTGATGTGATATGACGTGATGTTTCGCAGCA
AGACCCCCAGGTGATTGTAGCCCTGGTGGCGGTGGCGGTGACCTTCCTGG
TGATCGTTCTCAGCTCCATCAGGCAGAAAAAGGCGAGGAAATTCATGTCG
TGACTGGAGCATTACCATAGAGCGCTCCGTGGCATCGAGCGCAGCAGGAA
GCCGTTTGTACCCCTCCCCGGTCAAAATGACGGTCGTGGAGGGGGCCACC
GAGAATCGCTCATAAATGGTACCCATGTGGGGGCTCCTCTCTTTGTTGGC
CCACTATCCACTATATTGTATTTGCAGGGGCATGGCATCTGTTACCCTCC
CCCCCCCGGAGTGCATTCCGAGCTTAGGTACGTAGATACGTAGTCTTTGC
GGTAGACCTGTAAATGAAAAATGAGGCCAAAACACGAGAATGATGCGCAT
GCATGATGGTGACGCACCTCGCCTTACCTCACCTTCCCTCGCTTCCGATA
CATGTGGTAACGTAAGGATCGCGTGACCTCTGCGCAGCCGTTGAACCAGT
GCGGGAATAATGGGCCGGGCCTGCCTGCCCCGATGTTCTTGATTGTTTTG
ACCCCCTCCCACCTCCGACCTCAGCGTACAGCGCAAGCTCATGAGGACGT
CGCACATGTGCCCCCTCGCGGTGAAAATGTATAACCCCCCCTCCCCCCCT
TGTCGTCGTCGTTGTCGTTGTCGTGCCTCTTTTTTTCTTCTCTGGACGTT
TTTTTTTTCAACAGATAGCGCTCCAGCCGGAGGTGTACACGCCGTTCCGG
CTGCAGGAGAAGGAGGAGCTGTCGCACGACACCAGGATGTTCCGCTTCGC
GCTGCAGTCGCCGAAGCACGTGCTGGGCCTGCCAACCGGGCAGCACGTGT
CGATGAAGTTCGTCGACAAGGCCGACGGCAAGACGGTCACGAGGTCCTAC
ACGCCCACCAGCTCCGACCTGAACGTGAGAGCGGATCGATGAAGGGGACA
ATACAAAGGCGTTCATGTGTTCATGTACTTGGTTTGTTTTTTGTTGTGGT
GGTGTTTCTTGGTTCTCGGTTCTTTTTTGTTTTTTGTTTATTGCGGGTCG
TTCCGTTCGTGCGCCTACGTCGGTCTTTTCCTCTTCTTCCTTTCGTGTTT
GTTTGTTTGCTTGTTTGTGGATGGATGGGTGGATGGGTGGGTGGATGGAT
GGATGGATGGATGGATGGGTGGGTGGATGGATAGATGGATGGATCAATGG
ATGGGTGGATGGGTGGATGAATGGATCAATGTATGGATGGATGGATGGAT
CAATGAATTGATAGATATATGGGTGGATGGTGGATGGATGGTGGATGGAT
GGATGGATGGAAGTGCTTTGGTAGATTTGTCGGTATCTCCGTTTATCAAG
TATAAATTGTGGTTTGTTTTTTTGTTGCTGGGGCGGTGGGGGGGGCACGA
GGGAAGGGCCAACGATACATTCGCAGAGAGGCACATGCCAACATGGGTGC
CTTACGCTTCGCTGGGTGCGTGCTGTGTACGCGCATCACCGGATGGAGCA
TGTCGCCCCCCCCCCCTCCCTCCCCCCCTCCGCCTTGTGCTTTCTTTCGT
GTCAACGCCAACAACAACAACAACAACAACAACAACAACAACAATCAACG
ACAACCAACAACAACAACCCAACGATCACGACAGGTTGGTCACGTAGACT
TCGTGATCAAGGTGTACCGGCCGAACGTGGAGCCCAAGTTTCCAGACGGC
GGCAAGATGTCCATGCACTTGGAGCGTCTGCAGGTGGGGAGCTGCTTGCG
TTGAGCCTAGAGCGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAACGGCGGCGAACATCGCAGCTCAAACGACGATACCCG
TCCGCTTTCACGGGGCCGTACTCAGCAGGCTTCTAGAGACCCGCGCGTTC
GTCTTAAGGGTTTGGTGTTTGCAAAATGTTTGATGTTGGCCGAATGCAAT
GTAAAGTTTCATGGAATGTTACATGTTTGGAGGGATGCAGATCGGGGACA
CGGTGGACATGCGAGGGCCGAAGGGGAGTCTGACGTACACGGGGAGCGGG
AACTTCAGGATTAGGCGCCGGGACGACCGACAGGTAAATTCACTGCCACC
TGTGACGCTTTTGTGGCGTTTTTTTTGTCTTGTCCTTTGTCTCCGCGTCA
GCGCTGTTCGAAAGAGGTAAGGTACCGAGCCGCCGCCACATGGACCAATA
CAGTAGCGATTTTTGTGGGCCGCGCTGATTGGTTATGATTGGTTCCCCCC
CGGCCTCGGTTCGGTTTCTGTCGTCATTCTGTCGTCATCCTGTCAGGTGC
GCAAGCTCGGCATGATGGCTGGAGGCACGGGCATCACCCCGATGCTCCAG
GTCATCTCGGCCGTGATGAGGGAAGCGGGCGGGATGGGCAGGAGCACGAT
CGAGATGAGCCTGATATTCGCCAACAAGTCGGAGGACGACATCCTGCTGA
GAGGCATGATCGAGAAAATGGTGAGGCAATACTAAATTACCGGAGAACAT
TATGTACCAAGAGTAATTCAAATGGCAGGTAGAGAAAGGCCACTTCCAAA
CACACGGGATCTGGTGGGCCCTACTACTTTTTGTTGAATGATTTGTTTTG
TTCGATTTTTTGTTTTTCTTTTTTCGTTGTGTTGCCCTTATCCGGAGCCA
GCCCGGGTCTCGCAGACTCAAAGCACCTGCGGAGGGTTGATCCATCCGTG
TCTGATGTTGATGTCTGATGTTGATGTCTGGTGTTGATGTCTGATGTCGA
TGTCTGATGTTGATGTCTGATGTTGATGTCTGATGTTGATGTCTGATGTT
GATCTCTGATGTTGATATCTGATGTTGATGTCTGATGTTGATGTCTGATG
TTGATATCTGATGTTGATGTATGTTTGTTCGTGTCCATCCAGCCACACCG
CAGTCACTGTTGCCAGCAGAGTTTTCGCGAGTGATGGGGGCTGCTAGTAG
GTATAGCGAGTACTCCCGGCGTAGATACTATCATGTGTGCGCCGCCCCGC
CTGGACGAGGTTGTTAAGTTCCTTTGCTCTCTACTAAATTTGATGTTCAA
GGGCTACTTCATGATACCCGTAAGGGCATCGGCGTCATGTTCATGTGTGG
AGCACTGGTAAATGTAGCACGTACAGTTATCATTCTTGCCTTTCTCTGTG
ACACCGCGTCTCTCGTATTGTTGTCGTATTGTTGTGCGCGCGAGAGCGGC
TTGAGCGCAGGGTTAAGGTTGTTTTGACCAGCCCGTCCCGTCCGCTGGAA
GGCCAAACAACCATGTACCGTACCGTGATGTAGCCGTGATGTAGCCGGGG
ATGGGGAGCGAGGGTTTAGTTTGTCTGCAGCAGTCCGTCCCCCTGAAAAC
GCTTTCGTCATCCAATAGGCTGAACGAAGGTTACGAACGGTTACGCTGTT
GTTTCTTCCCAAAACACCACAAAACCGAAAATGGCGGGGCGCCTCACTAA
GCGAATCATCACCTTTTGGTTGCCGGACCTATGCTATGCTGCGCGTGTTG
TTTGATGCTTGATGTTTGATGTTTGATGCTCAGGCGGCGGGAAACCCCAA
CTTTAAGTTCCATTTCACGCTCGACACCGCCCCGGCGGGATGGACACACA
GCCAGGGCTTCATCACCAAGGAGGTGGGGTCATTTTCCTTTTTTTTTTGT
ATATATTCTACCGTGCTGCTGTTTTGCCGTCGATCGTTCTTCGAATGTAC
AGTGCAAAAGCATGGTCCACTTCCACGTTTTTTTTTTAGCCCAAAACGTG
AGGAGTTTAGGCCCAACGTTTCCGGTGTTGGTGCTTCGTGCAATTGATCT
ACATACGAAGTATTTATGTTGCACGTCGCAAGCGTGGACGCTCTCTTCAG
CTTTCTGTCGTATAGTTGCCGCCGTGGACGTCAAGTTACGTAAAGGTTAA
TTAAGTTAAGGCAGCTTTTCTCCTGCCGCGTGTCGATCGTTTCGCGGTGC
CGTGCTCGAGGCCCGACAATACAATATTCAACAGAGGGAAACAACTTCTC
CATGCATTATACTTAGTTTATTCTTCTCCATACATTCTAAAATTCTAAAG
ACGCAGTTGGCGTCGTCATTCTCCCCGCTTGCTCAGGCTGCTTTGCCGGA
AGCTGGTTAGCCCTCGTTTTGCCGAACGCCGGATTTAAGACTATAAAACT
TGAAGCTCGGCGACAAGAACAGCCACAACGCACCCAACAAACGTTCAACT
CCGCGCCGATACCAGCAACAACAACGACAGGCCAGCCTGCCTCAGCAGCA
GCGAGTGAAGAAAGTTAATGACGAGAGTTAACAACGTTCGACTCGCCCAC
CATTGTATTTCTCCGCACCCGCACCCGCCAGATGGTGTCAGAGCACATGC
CGGAGCCGGGGGCGGACACCCTGATCCTCATGTGCGGCCCGCCGCCCATG
CTCAAGTTCGCGTGCCTCCCTGCGCTGGAAGCGTTAGGGTTCTCGGAGGA
CATGCACTTCTCTTTCTAGATGGATGGATCGACGGATCGACGGCGCTTCT
TTCTCTCTCTTGTTTTGTGTTGCTTTTGTGTTTTTGTGTAGCACGTTCGC
GCGTTCGCTTGGTCGGGTTAGTGATTTTTGCGTGCACTGGGTTAGAGCTT
CTTATGTTTCGGCAAAACAGCAGTGTCGTTGGAAACCGCTGGAAAGAGCT
TTTTGAGACACGTATGTTGTGTTATGTTATATGTTACATTGGTTGTGTTT
CGTGTCGTTCATTGTCTCTCGCGGGAGAGGGTGGTTGCTCCGTCTTGGTG
GTGGTGTCAAGCCTCGAGCACGCGTGTCGCAAAGAGGATTGGTCTTGTCT
TTTACTTCATCGTGGTACTGTACAAGCTGCCTGCGTCGCTTTGAGATGAT
AAGCTGCGGAGGGTGGTCCCCCCGAGTGACAGCTTCCTTCCGTGGCGGAC
GTATCACGCGAGTATTATAGCCAATTTCTCGGAGATAGGAACACATCGCA
GGGGTTGACATCGTCAAGTTGCAAGTTTAGTGGTGAGAGCTGCTGTGGTG
AACTACTGTATTGGTGAGTGAACGAGGTTCGGGTGGACGGAGACTGCCAG
AGATTTTCAAGGGGGTGGTATCTAACGTCATTAGTTAGAGGTGGCAAAAA
AGATTTCCGTCCCAAATCTTCACCATGAAGATTTTACCTCCTTCGCGCGT
GTTCGAGTGTATCCGGGCATGCACACGACTCTCTCCTTCCAGTGCGCCGC
ACAGCAGCGTGTTTTCGGGTCCCCATCGCACCTGCGGCTAGGTCTTTGGC
GGCAAACCGCAACTCTCCGCAGGGTTTGCAGTCCCTGCTGTCGAAACGTC
GAGTTCAGGGACCCAATATCGTCGCGCGTTGGATTTTTTTGGGTTTAGGG
TTGGTTTCGGATATACTTGTATATTTGACCGGAAAACTGACCTGCCCCAT
TTCCTGCTCGTATGAAAGCCCTGGTCAGTGCGAACATTTGGTTAACCGAT
ACGTAGCTAACTCTGTATAGTTAGCGGTTGCGGAGATACGAAAGTATGGG
ATTTTGAACATTGGCTTATAAAACCGCTCAAAGCCAGAACAGTACTCGAT
TCGGTAAAAAAACTGGGTTGCTCCAACAACCAAAGTACTGTTGCCAGGTC
AGTTGGAGGTCGAGGCCACGAATTCGAACGGGCTGAGGAGATATGGAAGA
TCCTAAATATGATGCCGAACCAAAATAGGCCAAAAGGAAAGAGGTTACCG
TTACAGTGTAGTTCAGACATCCTACCCAATTTTGGGTCGGAGAATGCGAA
TCCGAGAACCTGATTTGGATATTTGAACGGGTGAGAAGGAGATAGATATG
GAAGATCCAAAATATCGCGCCGAAACAAGAATGGTAAAAAAGC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig95:248523..256515+

>mRNA_C-linearis_contig95.16975.1 ID=mRNA_C-linearis_contig95.16975.1|Name=mRNA_C-linearis_contig95.16975.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at C-linearis_contig95:248523..256515+ (Chordaria linearis ClinC8C monoicous)
ATGGGCGCTCTCGAGTTTATTATGGGCGCTCTCGAGTTTATTCAAGACCC
CCAGGTGATTGTAGCCCTGGTGGCGGTGGCGGTGACCTTCCTGGTGATCG
TTCTCAGCTCCATCAGGCAGAAAAAGCAAGACCCCCAGGTGATTGTAGCC
CTGGTGGCGGTGGCGGTGACCTTCCTGGTGATCGTTCTCAGCTCCATCAG
GCAGAAAAAGATAGCGCTCCAGCCGGAGGTGTACACGCCGTTCCGGCTGC
AGGAGAAGGAGGAGCTGTCGCACGACACCAGGATGTTCCGCTTCGCGCTG
CAGTCGCCGAAGCACGTGCTGGGCCTGCCAACCGGGCAGCACGTGTCGAT
GAAGTTCGTCGACAAGGCCGACGGCAAGACGGTCACGAGGTCCTACACGC
CCACCAGCTCCGACCTGAACATAGCGCTCCAGCCGGAGGTGTACACGCCG
TTCCGGCTGCAGGAGAAGGAGGAGCTGTCGCACGACACCAGGATGTTCCG
CTTCGCGCTGCAGTCGCCGAAGCACGTGCTGGGCCTGCCAACCGGGCAGC
ACGTGTCGATGAAGTTCGTCGACAAGGCCGACGGCAAGACGGTCACGAGG
TCCTACACGCCCACCAGCTCCGACCTGAACGTTGGTCACGTAGACTTCGT
GATCAAGGTGTACCGGCCGAACGTGGAGCCCAAGTTTCCAGACGGCGGCA
AGATGTCCATGCACTTGGAGCGTCTGCAGGTTGGTCACGTAGACTTCGTG
ATCAAGGTGTACCGGCCGAACGTGGAGCCCAAGTTTCCAGACGGCGGCAA
GATGTCCATGCACTTGGAGCGTCTGCAGATCGGGGACACGGTGGACATGC
GAGGGCCGAAGGGGAGTCTGACGTACACGGGGAGCGGGAACTTCAGGATT
AGGCGCCGGGACGACCGACAGATCGGGGACACGGTGGACATGCGAGGGCC
GAAGGGGAGTCTGACGTACACGGGGAGCGGGAACTTCAGGATTAGGCGCC
GGGACGACCGACAGGTGCGCAAGCTCGGCATGATGGCTGGAGGCACGGGC
ATCACCCCGATGCTCCAGGTCATCTCGGCCGTGATGAGGGAAGCGGGCGG
GATGGGCAGGAGCACGATCGAGATGAGCCTGATATTCGCCAACAAGTCGG
AGGACGACATCCTGCTGAGAGGCATGATCGAGAAAATGGTGCGCAAGCTC
GGCATGATGGCTGGAGGCACGGGCATCACCCCGATGCTCCAGGTCATCTC
GGCCGTGATGAGGGAAGCGGGCGGGATGGGCAGGAGCACGATCGAGATGA
GCCTGATATTCGCCAACAAGTCGGAGGACGACATCCTGCTGAGAGGCATG
ATCGAGAAAATGGCGGCGGGAAACCCCAACTTTAAGTTCCATTTCACGCT
CGACACCGCCCCGGCGGGATGGACACACAGCCAGGGCTTCATCACCAAGG
AGGCGGCGGGAAACCCCAACTTTAAGTTCCATTTCACGCTCGACACCGCC
CCGGCGGGATGGACACACAGCCAGGGCTTCATCACCAAGGAGATGGTGTC
AGAGCACATGCCGGAGCCGGGGGCGGACACCCTGATCCTCATGTGCGGCC
CGCCGCCCATGCTCAAGTTCGCGTGCCTCCCTGCGCTGGAAGCGTTAGGG
TTCTCGGAGGACATGCACTTCTCTTTCTAGATGGTGTCAGAGCACATGCC
GGAGCCGGGGGCGGACACCCTGATCCTCATGTGCGGCCCGCCGCCCATGC
TCAAGTTCGCGTGCCTCCCTGCGCTGGAAGCGTTAGGGTTCTCGGAGGAC
ATGCACTTCTCTTTCTAG
back to top