mRNA_C-linearis_contig94.16957.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig94.16957.1
Unique NamemRNA_C-linearis_contig94.16957.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K)

HSP 1 Score: 445 bits (1145), Expect = 5.980e-152
Identity = 236/351 (67.24%), Postives = 275/351 (78.35%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFASTEA-------KKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNMLTSAP-VDDSAISVPRA--VDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIRIVCVPPA 1023
            +RID+   KASIIDT R++CP AS   AA M TR LE E  DG  + +   Q PTPI+DRVD I+ING GN+TP+ DAKT++EIIWLLPS AAKEFRRQSA TICRVL GD SLC EIEQRCARL+STEEGRAYQ+F+ DQGPAKK R+  P WF+Y T EEK+A+ S EA       KK L L EID++KTCK++L SV +F +RD IEFADRIKDVQRRA+R +NM+T+AP VD S +SV  A  VDD+IDPETGL+ AT KCS SVRGPETSIC EA KMG+ VGEKA Q+GKVVKRLYSE+YG EAGRNIPKR TTFRGKPF  N+ ++RD DLIQ+ IRIVC P A
Sbjct:  146 VRIDDGLGKASIIDTTRLVCPGASSAYAAQMFTRVLEKERDDGGNSFMQDAQHPTPIADRVDYIRINGHGNVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQFDQRDEIEFADRIKDVQRRATRVDNMITAAPTVDTSPVSVCVAMPVDDTIDPETGLLTATPKCSPSVRGPETSICVEAGKMGISVGEKAGQVGKVVKRLYSERYGQEAGRNIPKRSTTFRGKPFSENTYYARDSDLIQRGIRIVCAPAA 496          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.070e-129
Identity = 204/344 (59.30%), Postives = 256/344 (74.42%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFASTEAKKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNMLTS-AP----VDDSAISVPRAVDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIRIVCVP 1017
            +R+DE++   S ID I ++CP ASPE+AAHMLTR LE E   G  NH   V GP  ++DR+  IKING+GN TP+ DA T IEIIWLLP+RAA+EFR+QSA TI RVL GD SLC EIEQRCARLQ+TE+GRAYQ+ +  Q P KK +S  P WF+Y T ++K A+ + + KK++ + E+++++ CK  L SV +FA RD IE+ADRI+D QRRASRA+N+L + AP    V DS+  +    D+SIDPETG +IATHK S SVRGPETSIC EAAK+G+  GE+A Q+GKV KRLY +KYG EA R+IP R TTFRGKPF   + +SRD DLIQQAIRIVC P
Sbjct:  161 VRVDENTGMLSDIDVINMLCPGASPEDAAHMLTRVLEKEAAGGANNHGPTVHGPVALADRIKRIKINGKGNPTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEDGRAYQSVMTGQAPTKKHKSL-PEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPGDVGDSSTLIATPFDNSIDPETGKLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQQAIRIVCCP 503          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 7.260e-126
Identity = 211/355 (59.44%), Postives = 250/355 (70.42%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFASTEA-------KKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNMLTSAP-VDDSAISVPRA--VDDSIDPETGLVIATH----KCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIRIVCVPPA 1023
            +RID+   K SIIDT R++C  A    AA M TR LE E  DG ++ + G Q PTPI+DRVD I+ING G +TP+ D+KT++EIIWLLPS +AKEFRRQSA TICRVL GD SLC EIEQRCARLQSTEEGRAYQ+F+ DQGPAKK R+  P WF+Y T EEK+A+ S EA       KK L L ++D+++TCK++L SV +F E D IEFADRIKD+QRRA R +NM+T+AP VD S ISV  A  VDD+IDPETG          K   SVRGPETSIC EA KMG  V              YSE+YG EAGR IPKR TTFRGKPF   + ++RD DLIQ+AIRIVC P A
Sbjct:  146 VRIDDGCGKESIIDTTRLVCRGAYSAYAAQMFTRVLEEERNDGGSSFMRGEQTPTPIADRVDYIRINGHGKVTPVSDSKTIVEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLRDVDVFETCKEKLNSVGQFDEGDEIEFADRIKDIQRRAKRVDNMITAAPAVDTSPISVCAAMPVDDTIDPETGEKAGQTGKVVKRLPSVRGPETSICVEAGKMGSSVXXXXXXXXXXXXXXYSERYGQEAGRKIPKRSTTFRGKPFSGKTYYARDSDLIQRAIRIVCAPAA 500          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K)

HSP 1 Score: 359 bits (922), Expect = 4.500e-118
Identity = 190/344 (55.23%), Postives = 249/344 (72.38%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFASTEAKKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNML-----TSAPVDDSAISVPRAVDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIRIVCVP 1017
            +R+DE S   S ID I+++CP+ + + A   L R LE +  +   N         P++DRV  +KING G++TP+ DA T IEIIWLLP+RAA+EFR+QSA TI RVL GD SLC EIEQRCARLQ+TEEGRAYQ+ +  + P KK +S  P WF+Y T ++K A+ + + KK++ + EI++++ CK  L SV +FA RD IE+ADRI+D QRRASRA+N+L     + A V DSA+ +   +D+SIDPETG++IATHK S SVRGPETSIC EAA++G+  GE+A Q+GKV KRLY E+YG EA R+IP R TTFRGKPF   + +SRD DLIQ+AIRIVC P
Sbjct:  165 VRVDERSGMVSDIDVIKMLCPEKNDDYAKIALKRILERQQQEADHND----SDSAPLADRVHYLKINGVGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEEGRAYQSVMTGEAPPKKHKSL-PEWFEYATSDQKSAYVAAKVKKSVVVTEIEMHEICKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPAVVGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAARLGISTGERAGQVGKVAKRLYGERYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQRAIRIVCCP 503          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 4.970e-118
Identity = 207/333 (62.16%), Postives = 243/333 (72.97%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFASTEA-------KKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNMLTSAP-VDDSAISVPRA--VDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWS 969
            +RID+   KASIIDT+R++ P ASPE AA M TR L+ E GD     V   Q PTPI+DRVD I+INGRG +TP+ DAKT++EIIWLLPS AAKEFRRQSA TICRVL GD SLC EIEQRCARLQSTEEGRAYQ+F+ DQGPAKK R+  P  F+Y T EEK+A+ S EA       KK L L  ID+++TCK++L SV +F ER  IEFADRIKDVQRRA+R +NM+T+AP VD S +SV  A  VDD+ID ETGL+I T KCS SVRGPETSIC EA KMG+ VGEKA Q+GKVVKRL                 TTFRGKPF  N+ ++
Sbjct:  146 VRIDDGLGKASIIDTVRLISPTASPEYAAQMFTRVLQKERGDCGNTSVRDEQTPTPIADRVDYIRINGRGKVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFMTDQGPAKKQRAAMPARFEYATAEEKRAYISIEATTSKVLAKKALVLRYIDVFETCKEKLKSVGQFDERAQIEFADRIKDVQRRATRVDNMITAAPAVDTSPVSVCVAMPVDDTIDTETGLLIETPKCSPSVRGPETSICVEAGKMGIGVGEKAGQVGKVVKRL-----------------TTFRGKPFSENTYYA 461          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC)

HSP 1 Score: 321 bits (823), Expect = 6.610e-105
Identity = 182/353 (51.56%), Postives = 230/353 (65.16%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQG--------PAKKTRS-EEPFWFQYITDEEKKAFASTEAKKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNMLTSAPVDDSAI--SVPRAVDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIRIVCVPPAK 1026
            IR+D+++   S+IDTIR++  +    NA   L R + +  G               + ++   +K+NGRG  TP+ DAKTLIEI+WLLP R A  FR Q    ICR+L GDTSL  EIE R A L  TEEGRA Q F ++            K+ RS EEP WF+  T EEK+AFAST   K +   E+++Y  CK +L SV +F  RD IEF DR++D QRRA RA NM+TS PVDD+ +  +V R VDD+ID  TGL +AT +CSESVRG ETSICNEAAK+G+ VGEK  +IGK + R Y+++YGVEAG NIPKR TT+RGKPF  N  WSRD DL+Q+AIRIVC P  K
Sbjct:   30 IRVDKNTKLGSVIDTIRMVL-ECDSSNANTSLGRLVLSHPG---------------LGEKYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTSTPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEKGGEIGKELIRRYTKRYGVEAGLNIPKRPTTYRGKPFNENCYWSRDADLVQEAIRIVCSPEKK 366          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: A0A6H5JC19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC19_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 2.570e-78
Identity = 128/207 (61.84%), Postives = 158/207 (76.33%), Query Frame = 1
Query:  397 AYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFASTEAKKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRANNMLTSAPVD--DSAISVPRAVDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIRIVC 1011
            AYQNF++DQ PAKK RSE PFWF + + E+K+ + S  A K + L ++D+ KT KD+L SVN+F  RD IEFADRIKD+Q RA   +NML + P+D  +S ++V R V+DSIDPETGL IAT  CSESVRGPETSICNEAAKMG K+GEKA Q+GK+ K LY +++GV A  NIPKR T FRGKPF  N+ W RD D+IQ+AIRIVC
Sbjct:  156 AYQNFVLDQSPAKKQRSEAPFWFNFASGEQKRDYVSVMANKAMTLEQMDLCKTLKDELQSVNQFTGRDSIEFADRIKDIQMRALAPSNMLAAVPMDADNSIVAVARPVNDSIDPETGLRIATATCSESVRGPETSICNEAAKMGFKLGEKAGQVGKMAKSLYRKRHGVAAAANIPKRHTIFRGKPFSENTHWQRDADIIQEAIRIVC 362          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: A0A6H5JDQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ1_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 6.040e-70
Identity = 112/167 (67.07%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFA 501
            +RIDE++ K SIID  R++CP+AS E AA MLTR LE E  DG        Q   P+S+R++ ++IN +G +TP+CDA TL+EIIWLLPS AAKEFRRQSA TI RVL GDTSLCDEIEQRC RLQSTEEGRAYQ FL+DQGPAKK RSEEPFWF+Y +DEEK+AF+
Sbjct:   57 VRIDENTGKGSIIDVNRMLCPEASAEYAAKMLTRVLEKEKRDGMERPGQNAQSTIPLSERIEYVRINDKGPVTPICDASTLVEIIWLLPSNAAKEFRRQSAQTITRVLGGDTSLCDEIEQRCDRLQSTEEGRAYQGFLLDQGPAKKQRSEEPFWFEYASDEEKRAFS 223          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: B5LW93_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW93_9PHYC)

HSP 1 Score: 210 bits (534), Expect = 1.350e-60
Identity = 135/362 (37.29%), Postives = 194/362 (53.59%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLM--DQGPAKKTRSEEPFWFQYITDEEKKAFASTEAKKNLAL--------------------------HEIDIYKTCKDQLLSVNRFAE-RDGIEFADRIKDVQRRASRANNMLTSAPVDDSAISVPRAVDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAI 999
            IR+DED+   S+ID ++++CP      A   L R LE              + P  ++D V  +KINGRG++TP+ DAKT+ EIIWLLP RAA+EFRRQSA  + RVL GDT+LC EIE+R   LQST EGRA+QNF +  + G  K+   E     ++ + E+ + F   + +  + +                           E+ I  + K    +VN  +E R  IE +D + D+QRRA R             ++SV  AVD       G+ + T  C  ++RG E SI   + +MGV +G +A   GK +K LY  +YG +A  NIPKR T F+G+P+  N+ ++RD DL+QQAI
Sbjct:  127 IRVDEDTGLGSLIDIVKIVCPDMCKVYAKTTLARVLE--------------EWPHHVADCVKRLKINGRGHVTPVADAKTIAEIIWLLPGRAAREFRRQSAEIVMRVLGGDTTLCKEIEERSVGLQSTREGRAFQNFALGGESGEKKRLGGE---LMEHASSEDYERFVKMKVEHEMCVMEQXXXXXXXXXXXXXXXXQEEGKVDSELRIVASLKRGFDAVNSLSESRHKIELSDIVSDIQRRALR------------KSVSVETAVD------PGVSVPTPDCPANIRGEEVSIAMVSGEMGVHLGGRAGTAGKKLKVLYMARYGADAANNIPKRATIFQGRPYRENTYYARDKDLVQQAI 453          
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Match: A0A835Z1W0_9STRA (Uncharacterized protein n=8 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.460e-49
Identity = 134/347 (38.62%), Postives = 184/347 (53.03%), Query Frame = 1
Query:    1 IRIDEDSVKASIIDTIRVMCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKINGRGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEIEQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAF-ASTEAKKNLAL------HEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDV-QRRASRANNMLTSAPV--DDSAISVPRAVDDSIDPETGLVIATHKCSESVRGPETSICNEAAKMGVKVGEKASQ---IGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*NSLWSRDVDLIQQAIR 1002
            IRID  S   S++D IR++ P+  P N A    + L  E  D              ++     ++ING G +TP  DA+TL+EI+W LP + A+ FRR SA T+CRVL GD SL +EIE RC  LQ+TE GRA Q+FL+  G  + +R E P   Q  T E++  F AS   ++ LAL       ++ + K   D L S      RD I F D ++ V Q  A  A  ++ + P+  DD +++ P            L    H      RGPE S+ + AA+MGV++  KA     IGK VK LY+ KYG  A   IPKR+  FRGK F  N+ W RD DL+++AIR
Sbjct:   10 IRIDLASGMGSVLDVIRLVNPEI-PSNQASSTFKRLALELPD--------------VASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVNEIEGRCRALQATEVGRAAQDFLIGDGSVQVSR-ELPAELQLATPEQRTLFVASWMHERRLALIDREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVQPPAHDAGALIVARPMSEDDPSVATP------------LAQVAH------RGPEISMHSVAAEMGVRI--KAGTECLIGKKVKALYAIKYGTAAAAAIPKRNVPFRGKVFAENTYWKRDQDLMEEAIR 320          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig94.16957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QN79_ESV1K5.980e-15267.24EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K[more]
D8LPL9_ECTSI1.070e-12959.30EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K200_9PHAE7.260e-12659.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN80_ESV1K4.500e-11855.23EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5L5N7_9PHAE4.970e-11862.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5LWM4_9PHYC6.610e-10551.56Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A6H5JC19_9PHAE2.570e-7861.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDQ1_9PHAE6.040e-7067.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5LW93_9PHYC1.350e-6037.29Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A835Z1W0_9STRA5.460e-4938.62Uncharacterized protein n=8 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig94contigC-linearis_contig94:635333..636358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.8
Seed ortholog evalue1.5e-94
Seed eggNOG ortholog2880.D8LPL9
Hectar predicted targeting categoryother localisation
EggNOG OGs2EUDG@1,2SWJG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1026
Cds size900
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig94.16957.1prot_C-linearis_contig94.16957.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig94 635387..636286 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930807.6306877-UTR-C-linearis_contig94:635332..6353861622930807.6306877-UTR-C-linearis_contig94:635332..635386Chordaria linearis ClinC8C monoicousUTRC-linearis_contig94 635333..635386 +
1690881260.334067-UTR-C-linearis_contig94:635332..6353861690881260.334067-UTR-C-linearis_contig94:635332..635386Chordaria linearis ClinC8C monoicousUTRC-linearis_contig94 635333..635386 +
1622930807.6654403-UTR-C-linearis_contig94:636286..6363581622930807.6654403-UTR-C-linearis_contig94:636286..636358Chordaria linearis ClinC8C monoicousUTRC-linearis_contig94 636287..636358 +
1690881260.3595307-UTR-C-linearis_contig94:636286..6363581690881260.3595307-UTR-C-linearis_contig94:636286..636358Chordaria linearis ClinC8C monoicousUTRC-linearis_contig94 636287..636358 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930807.6467435-CDS-C-linearis_contig94:635386..6362861622930807.6467435-CDS-C-linearis_contig94:635386..636286Chordaria linearis ClinC8C monoicousCDSC-linearis_contig94 635387..636286 +
1690881260.3484619-CDS-C-linearis_contig94:635386..6362861690881260.3484619-CDS-C-linearis_contig94:635386..636286Chordaria linearis ClinC8C monoicousCDSC-linearis_contig94 635387..636286 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig94.16957.1

>prot_C-linearis_contig94.16957.1 ID=prot_C-linearis_contig94.16957.1|Name=mRNA_C-linearis_contig94.16957.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=300bp
MCPKASPENAAHMLTRFLENENGDGTTNHVLGVQGPTPISDRVDSIKING
RGNITPMCDAKTLIEIIWLLPSRAAKEFRRQSAHTICRVLRGDTSLCDEI
EQRCARLQSTEEGRAYQNFLMDQGPAKKTRSEEPFWFQYITDEEKKAFAS
TEAKKNLALHEIDIYKTCKDQLLSVNRFAERDGIEFADRIKDVQRRASRA
NNMLTSAPVDDSAISVPRAVDDSIDPETGLVIATHKCSESVRGPETSICN
EAAKMGVKVGEKASQIGKVVKRLYSEKYGVEAGRNIPKRDTTFRGKPFP*
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mRNA from alignment at C-linearis_contig94:635333..636358+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig94.16957.1 ID=mRNA_C-linearis_contig94.16957.1|Name=mRNA_C-linearis_contig94.16957.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1026bp|location=Sequence derived from alignment at C-linearis_contig94:635333..636358+ (Chordaria linearis ClinC8C monoicous)
ATACGCATCGACGAGGATTCGGTCAAAGCATCCATCATCGACACCATACG CGTGATGTGCCCCAAGGCTTCTCCCGAAAATGCTGCGCACATGCTAACAC GCTTCCTTGAAAACGAAAATGGTGACGGTACAACCAACCATGTACTTGGG GTACAGGGCCCGACGCCCATCTCCGATCGAGTTGACTCCATCAAGATCAA CGGAAGGGGGAATATCACACCCATGTGCGACGCGAAAACTCTCATTGAAA TCATCTGGCTGCTACCCTCGCGCGCCGCCAAGGAGTTCCGGCGCCAATCG GCCCACACAATCTGCAGAGTGCTTCGCGGCGACACGAGTCTCTGCGATGA GATCGAACAGCGCTGTGCCCGCCTACAGAGCACGGAAGAAGGCAGGGCCT ACCAAAACTTTCTGATGGACCAGGGCCCCGCTAAGAAGACTCGGTCGGAA GAACCCTTTTGGTTCCAGTACATAACCGATGAAGAGAAGAAAGCCTTTGC TTCCACTGAGGCCAAGAAAAACTTGGCACTGCATGAGATTGACATCTACA AAACATGCAAGGACCAATTGCTGTCTGTCAATCGATTCGCCGAGCGCGAC GGGATCGAGTTCGCAGACCGCATTAAAGACGTTCAGCGACGGGCGTCGAG AGCCAATAACATGCTAACATCCGCGCCTGTCGACGATTCGGCCATTTCCG TGCCGAGGGCAGTAGACGACTCCATCGATCCGGAGACGGGTCTAGTCATT GCAACACACAAGTGCAGCGAGAGCGTTCGAGGTCCGGAGACGTCGATTTG CAACGAGGCTGCGAAAATGGGCGTAAAAGTAGGGGAGAAGGCTAGTCAGA TCGGCAAAGTTGTTAAGCGCCTGTACTCAGAGAAGTACGGCGTCGAAGCC GGTCGCAACATACCCAAGCGGGACACCACCTTCCGGGGCAAGCCTTTTCC TTAAAACTCTCTCTGGTCACGCGATGTGGATCTGATTCAACAAGCCATCC GGATCGTATGTGTTCCACCGGCGAAA
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Coding sequence (CDS) from alignment at C-linearis_contig94:635333..636358+

>mRNA_C-linearis_contig94.16957.1 ID=mRNA_C-linearis_contig94.16957.1|Name=mRNA_C-linearis_contig94.16957.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at C-linearis_contig94:635333..636358+ (Chordaria linearis ClinC8C monoicous)
ATGTGCCCCAAGGCTTCTCCCGAAAATGCTGCGCACATGCTAACACGCTT
CCTTGAAAACGAAAATGGTGACGGTACAACCAACCATGTACTTGGGGTAC
AGGGCCCGACGCCCATCTCCGATCGAGTTGACTCCATCAAGATCAACGGA
AGGGGGAATATCACACCCATGTGCGACGCGAAAACTCTCATTGAAATCAT
CTGGCTGCTACCCTCGCGCGCCGCCAAGGAGTTCCGGCGCCAATCGGCCC
ACACAATCTGCAGAGTGCTTCGCGGCGACACGAGTCTCTGCGATGAGATC
GAACAGCGCTGTGCCCGCCTACAGAGCACGGAAGAAGGCAGGGCCTACCA
AAACTTTCTGATGGACCAGGGCCCCGCTAAGAAGACTCGGTCGGAAGAAC
CCTTTTGGTTCCAGTACATAACCGATGAAGAGAAGAAAGCCTTTGCTTCC
ACTGAGGCCAAGAAAAACTTGGCACTGCATGAGATTGACATCTACAAAAC
ATGCAAGGACCAATTGCTGTCTGTCAATCGATTCGCCGAGCGCGACGGGA
TCGAGTTCGCAGACCGCATTAAAGACGTTCAGCGACGGGCGTCGAGAGCC
AATAACATGCTAACATCCGCGCCTGTCGACGATTCGGCCATTTCCGTGCC
GAGGGCAGTAGACGACTCCATCGATCCGGAGACGGGTCTAGTCATTGCAA
CACACAAGTGCAGCGAGAGCGTTCGAGGTCCGGAGACGTCGATTTGCAAC
GAGGCTGCGAAAATGGGCGTAAAAGTAGGGGAGAAGGCTAGTCAGATCGG
CAAAGTTGTTAAGCGCCTGTACTCAGAGAAGTACGGCGTCGAAGCCGGTC
GCAACATACCCAAGCGGGACACCACCTTCCGGGGCAAGCCTTTTCCTTAA
ATGTGCCCCAAGGCTTCTCCCGAAAATGCTGCGCACATGCTAACACGCTT
CCTTGAAAACGAAAATGGTGACGGTACAACCAACCATGTACTTGGGGTAC
AGGGCCCGACGCCCATCTCCGATCGAGTTGACTCCATCAAGATCAACGGA
AGGGGGAATATCACACCCATGTGCGACGCGAAAACTCTCATTGAAATCAT
CTGGCTGCTACCCTCGCGCGCCGCCAAGGAGTTCCGGCGCCAATCGGCCC
ACACAATCTGCAGAGTGCTTCGCGGCGACACGAGTCTCTGCGATGAGATC
GAACAGCGCTGTGCCCGCCTACAGAGCACGGAAGAAGGCAGGGCCTACCA
AAACTTTCTGATGGACCAGGGCCCCGCTAAGAAGACTCGGTCGGAAGAAC
CCTTTTGGTTCCAGTACATAACCGATGAAGAGAAGAAAGCCTTTGCTTCC
ACTGAGGCCAAGAAAAACTTGGCACTGCATGAGATTGACATCTACAAAAC
ATGCAAGGACCAATTGCTGTCTGTCAATCGATTCGCCGAGCGCGACGGGA
TCGAGTTCGCAGACCGCATTAAAGACGTTCAGCGACGGGCGTCGAGAGCC
AATAACATGCTAACATCCGCGCCTGTCGACGATTCGGCCATTTCCGTGCC
GAGGGCAGTAGACGACTCCATCGATCCGGAGACGGGTCTAGTCATTGCAA
CACACAAGTGCAGCGAGAGCGTTCGAGGTCCGGAGACGTCGATTTGCAAC
GAGGCTGCGAAAATGGGCGTAAAAGTAGGGGAGAAGGCTAGTCAGATCGG
CAAAGTTGTTAAGCGCCTGTACTCAGAGAAGTACGGCGTCGAAGCCGGTC
GCAACATACCCAAGCGGGACACCACCTTCCGGGGCAAGCCTTTTCCTTAA
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