mRNA_C-linearis_contig94.16927.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig94.16927.1
Unique NamemRNA_C-linearis_contig94.16927.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A817Y2J9_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817Y2J9_9BILA)

HSP 1 Score: 124 bits (311), Expect = 9.840e-29
Identity = 74/182 (40.66%), Postives = 106/182 (58.24%), Query Frame = 1
Query:  304 VDLSPKTVRNWLNRLGITYRAGKHGRKVP-DERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDR----KDLTGFPTGKGQRLIICSAITSQGPL------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALFPDHKMVLILDNAPYHH 798
            +D+S  T+ + L+RLG  +  G      P  ++  R+R+++ID A AL  E  G   +VYMDESYVN  H+ + +WY+  +    K + G  TGKG RLII  AIT  G L            +T+E+I+ A + +   DYHKNM++  F+ WL+  L P F+ LFP  KM+L+LDNA YHH
Sbjct:  178 IDVSRSTLIDTLHRLGYQFGRGHVISSNPLQDKTPRIRQFIIDYANALKAETHGNSIIVYMDESYVNTRHALNGTWYDSSQPIGNKLIRG--TGKGARLIIIHAITKYGLLHHSHKKDATGVEQTAEMIWSADKAN--GDYHKNMNSTNFLLWLNNYLFPTFQLLFPSKKMILVLDNASYHH 355          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 1.090e-26
Identity = 96/309 (31.07%), Postives = 139/309 (44.98%), Query Frame = 1
Query:    1 EALSERNAIIRTSNLLGYDDDTVRKIIKEFRGNNCEAVPVRDGAARGHGK-------RDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRVPVDLSPKTVRNWLNRLGITYRAGKHGRKVPD---ERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDR----KDLTGFPTGKGQRLIICSAITSQGPL---------------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEAL--FPDHKMVLILDNAPYHH 798
            E  SE  A+++ +       D VR+I   +     +   + +  A G GK       R +LT   A  L  F    H   R V  + +A  +    +++   +R          +V   L+RLG   R G+   K P    ER AR+R +L+++  A   E AG   +VYMDES+V+  H    S++  D     +D  G  TGKG R+I+  AIT  GPL                           ET+E ++QA  K  + DYH  M  + FM WL+ RL PA+ A+  F   KM+L+LDNA YHH
Sbjct:  151 EGRSENEAVLQVARTFKIGHDKVRRINNHW----WDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNR----------SVGGLLSRLGYKRRRGRI--KTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGSGKKKMEDEETAEFLWQA--KLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHH 441          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A6H5KF48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF48_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.320e-25
Identity = 93/279 (33.33%), Postives = 130/279 (46.59%), Query Frame = 1
Query:   46 LGYDDDTVRKIIKEFRGNNCEAVPVRDGAARGHGKRDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRVPVDLSPKTVRNWLNRLGITYRAGKHGRKVP---DERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDRK----DLTGFPTGKGQRLIICSAITSQGPL---------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALFPDHKMVLILDNAPYHH 798
            L YD   + +   + RG   +A  V DG       R  +T ET   L  F +  H   R V  + + + L                +++S + V   L RLG   R G+   K+P   +ERK R+R +L+ +  A   E AG   +VYMDES+V+  H  + S++  D K    D  G  TGKG R+I+  AIT  GPL                     +T++ ++QA  K    +YH  M   TFM WL  RL PAF+A F + KM L+LDNA YHH
Sbjct:   24 LWYDKQELYETNGKGRG---KANSVDDG-------RRVITKETEDGLNEFIKGEHEAGRQVFRRTVKDYLECS-----------FGLEMSNRAVGGLLQRLGFKRRRGRI--KIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDKGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENHEQTAKFLWQA--KLATGEYHDAMTDGTFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHH 277          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.030e-25
Identity = 93/303 (30.69%), Postives = 138/303 (45.54%), Query Frame = 1
Query:   10 SERNAIIRTSNLLGYDDDTVRKIIKEFRGNN--CEAVPVRDG--AARGHGKRDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRVPVDLSPKTVRNWLNRLGITYRAGKHGRKVPD---ERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDR----KDLTGFPTGKGQRLIICSAITSQGPL---------------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEAL--FPDHKMVLILDNAPYHH 798
            SE+ A+++ +       D VR+I   +  +    E   V  G  A +  G+R +LT      L  F    H   R V  + +A  +    +++   +R          +    L+RLG   R G+   K P    ER AR+R +L+++  A   E AG   +VYMDES+V+  H    S++  D     +D  G  TGKG R+I+  AIT  GPL                           ET+E ++QA  K  + DYH  M  + FM WL+ RL PA+ A+  F   +M+L+LDNA YHH
Sbjct:  120 SEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRR-RLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNR----------SAGGLLSRLGYKRRRGRI--KTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDEETAEFLWQA--KLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHH 407          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A816GEQ0_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A816GEQ0_9BILA)

HSP 1 Score: 108 bits (270), Expect = 5.010e-24
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1
Query:  340 NRLGITYRAGKHGRKVPDE--RKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWY-EKDRKDLTGFPTGKGQRLIICSAITSQGPLE----------TSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALFPDHK-MVLILDNAPYH 795
            +++ ++Y   K   K+ ++  R  R+R++L+  A AL L+K     + YMDESYVN  H     WY + +R  LTG  TG G+RLII  AIT+ G L+          ++ELI++A  K+P  D+H NMD   F  W++  L PAFEA +   K M+LILDNAPYH
Sbjct:    3 DKMKLSYGLLKDSAKLTEDADRIKRIRQFLVKYATALNLQKNKEAVVCYMDESYVNTGHHMHYGWYADANRNILTG--TGVGKRLIIVHAITNDGLLQHFDASTNKTISAELIYEA--KNPTGDFHSNMDGYNFRLWVEQYLFPAFEAKYGHQKRMILILDNAPYH 164          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A816BCJ0_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A816BCJ0_9BILA)

HSP 1 Score: 105 bits (261), Expect = 1.800e-23
Identity = 67/169 (39.64%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  337 LNRLGITYRAGKHGRKVPDERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKD----RKDLTGFPTGKGQRLIICSAITSQGPL------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALFPDHKMVLILDNAPYH 795
            L+RL   +  G      P ++  R+R+++ID A A   E  G + +VYM+ESYVN  H+ + +WY+       K + G  TGK  RLII  A+T  G L            +T E+I+ AG+ +   DYHKNMD+ TF+ WLD  L P  + LF   KM+L+LDNA YH
Sbjct:    3 LHRLVYQFGRGHVISGNPQDKTPRIRQFIIDYANAFKSEANGDNVIVYMNESYVNTRHALNGTWYDATTPIGNKVIRG--TGKRARLIIVHAMTQHGLLHHTHREGATRVQKTPEMIWTAGKAN--GDYHKNMDSVTFLLWLDKYLFPTLQLLF-SKKMILVLDNASYH 166          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A6H5KKV8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV8_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.950e-23
Identity = 73/208 (35.10%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  304 VDLSPKTVRNWLNRLGITYRAGKHGRKVP---DERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDRK----DLTGFPTGKGQRLIICSAITSQGPL------------------------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALFPDHKMVLILDNAPYHH 798
            +++S + V   L RLG   R G+   K+P   +ERK R+R +L+ +  A   E AG   +VYMDES+V+  H  + S++  D K    D  G  TGKG R+++  AIT  GPL                                    +T+E ++QA  K    DYH  M    FM WL  RL PAF+A F ++KM L+LDNA YH+
Sbjct:   89 LEMSNRAVGGLLQRLGFKRRRGRI--KIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDKGVVQDGIGRTTGKGLRMMMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQA--KLATGDYHNAMTDGMFMQWLKHRLNPAFDAQFKNNKMFLVLDNASYHY 292          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.090e-23
Identity = 90/306 (29.41%), Postives = 137/306 (44.77%), Query Frame = 1
Query:    1 EALSERNAIIRTSNLLGYDDDTVRKIIKEFRGNN--CEAVPVRDG--AARGHGKRDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRVPVDLSPKTVRNWLNRLGITYRAGKHGRKVPD---ERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDRKDLT----GFPTGKGQRLIICSAITSQGPL---------------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEAL--FPDHKMVLILDNAPYHH 798
            E  +E  A+++ +       D VR+I   +  +    E   V  G  A +  G+R +LT      L  F    H   R V  + +A  +    +++   +R          +    L+RLG   R G+   K P    ER AR+R +L+++  A   E AG   +VY+D S+V+  H    S++  D  ++     G  TGKG R+I+  AIT  GPL                           ET+E ++QA  K  + DYH  M  + FM WL+ RL PA+ A+  F   +M+L+LDNA YHH
Sbjct:   12 EGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRR-RLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNR----------SAEGLLSRLGYKGRRGRI--KTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVGLPIEEGWFKETGSGKREMEDEETAEFLWQA--KLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHH 302          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.060e-23
Identity = 92/294 (31.29%), Postives = 128/294 (43.54%), Query Frame = 1
Query:   46 LGYDDDTVRKIIKEFRGNNCEAVPVRDGAARGHGKRDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRVPVDLSPKTVRNWLNRLGITYRAGKHGRKVP---DERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDRKDLT----GFPTGKGQRLIICSAITSQGPL------------------------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALFPDHKMVLILDNAPYHH 798
            L YD   + +   + RG   +A  V DG       R  +T E    L  F +  H   R V  + + + L                +++S + V   L RLG   R G+   K+P   +ERK R+R +L+ +  A   E AG   +VYMDES+V+  H  + S++  D K +     G  TGKG R+I+  AIT  GPL                                    +T+E ++QA  K    DYH  M    FM WL  RL PAF+A F + KM L+LDNA YHH
Sbjct:  145 LWYDKQELYETNGKGRG---KATSVDDG-------RRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECS-----------FGLEMSNRAVGGLLQRLGFKRRRGRI--KIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQA--KLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHH 413          
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.150e-23
Identity = 83/259 (32.05%), Postives = 120/259 (46.33%), Query Frame = 1
Query:  130 AARGHGKRDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRVPVDLSPKTVRNWLNRLGITYRAGKHGRKVPD---ERKARVREYLIDLAQALALEKAGTHKLVYMDESYVNLNHSRSKSWYEKDR----KDLTGFPTGKGQRLIICSAITSQGPL---------------------------ETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEAL--FPDHKMVLILDNAPYHH 798
            A +  G+R +LT      L  F    H   R V  + +A  +    +++   +R          +    L+RLG   R G+   K P    ER AR+R +L+++  A   E AG   +VYMDES+V+  H    S++  D     +D  G  TGKG R+I+  AIT  GPL                           ET+E ++QA  K  + DYH  M  + FM WL+ RL PA+ A+  F   +M+L+LDNA YHH
Sbjct:   47 AKKDDGRR-RLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNR----------SAGGLLSRLGYKRRRGRI--KTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDEETAEFLWQA--KLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHH 290          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig94.16927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A817Y2J9_9BILA9.840e-2940.66Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
D8LNM6_ECTSI1.090e-2631.07DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KF48_9PHAE2.320e-2533.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIM5_9PHAE3.030e-2530.69DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A816GEQ0_9BILA5.010e-2441.57Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A816BCJ0_9BILA1.800e-2339.64Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A6H5KKV8_9PHAE1.950e-2335.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKL0_9PHAE2.090e-2329.41DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KDX2_9PHAE3.060e-2331.29Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX7_9PHAE3.150e-2332.05DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig94contigC-linearis_contig94:42555..43901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score96.3
Seed ortholog evalue2.3e-17
Seed eggNOG ortholog1232437.KL661959_gene3116
Hectar predicted targeting categoryother localisation
EggNOG OGs1Q849@1224,2DG6F@1,2MP42@213118,2WY72@28221,2ZUQJ@2,433EQ@68525
Best tax levelDesulfobacterales
Best eggNOG OGNA|NA|NA
Exons2
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930802.1068246-CDS-C-linearis_contig94:42554..427351622930802.1068246-CDS-C-linearis_contig94:42554..42735Chordaria linearis ClinC8C monoicousCDSC-linearis_contig94 42555..42735 -
1690881257.1733873-CDS-C-linearis_contig94:42554..427351690881257.1733873-CDS-C-linearis_contig94:42554..42735Chordaria linearis ClinC8C monoicousCDSC-linearis_contig94 42555..42735 -
1622930802.124911-CDS-C-linearis_contig94:43284..439011622930802.124911-CDS-C-linearis_contig94:43284..43901Chordaria linearis ClinC8C monoicousCDSC-linearis_contig94 43285..43901 -
1690881257.1867366-CDS-C-linearis_contig94:43284..439011690881257.1867366-CDS-C-linearis_contig94:43284..43901Chordaria linearis ClinC8C monoicousCDSC-linearis_contig94 43285..43901 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig94.16927.1prot_C-linearis_contig94.16927.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig94 42555..43901 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig94.16927.1

>prot_C-linearis_contig94.16927.1 ID=prot_C-linearis_contig94.16927.1|Name=mRNA_C-linearis_contig94.16927.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=266bp
EALSERNAIIRTSNLLGYDDDTVRKIIKEFRGNNCEAVPVRDGAARGHGK
RDQLTAETAHHLVRFFEKAHLTKRSVASKALANMLRNPADVDDMEDRDRV
PVDLSPKTVRNWLNRLGITYRAGKHGRKVPDERKARVREYLIDLAQALAL
EKAGTHKLVYMDESYVNLNHSRSKSWYEKDRKDLTGFPTGKGQRLIICSA
ITSQGPLETSELIFQAGEKSPESDYHKNMDANTFMNWLDLRLKPAFEALF
PDHKMVLILDNAPYHH
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mRNA from alignment at C-linearis_contig94:42555..43901-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig94.16927.1 ID=mRNA_C-linearis_contig94.16927.1|Name=mRNA_C-linearis_contig94.16927.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1347bp|location=Sequence derived from alignment at C-linearis_contig94:42555..43901- (Chordaria linearis ClinC8C monoicous)
GAGGCGCTTTCGGAAAGGAACGCCATCATCAGGACCTCCAACCTCCTCGG CTACGACGATGATACCGTCAGGAAAATCATCAAGGAGTTTCGGGGCAACA ACTGCGAAGCTGTTCCCGTCAGGGACGGCGCCGCGCGAGGCCACGGCAAG AGAGACCAACTCACCGCCGAAACCGCGCATCACCTCGTCCGCTTCTTTGA GAAGGCGCACTTGACGAAGAGGAGTGTTGCCTCTAAAGCCCTTGCGAACA TGCTTAGGAATCCCGCCGACGTGGACGACATGGAGGACCGGGACAGGGTG CCCGTGGACCTCTCCCCCAAGACCGTTCGCAACTGGCTCAACCGGCTAGG GATCACGTACCGCGCGGGAAAGCACGGCCGCAAGGTACCGGACGAGCGCA AGGCACGTGTGCGAGAGTACCTGATCGATCTTGCCCAAGCGCTGGCGCTG GAGAAGGCCGGCACCCACAAGTTGGTGTACATGGACGAGTCGTACGTCAA CCTCAATCACAGCAGGTCCAAGTCCTGGTACGAGAAGGATAGGAAGGACC TGACGGGGTTTCCTACCGGCAAGGGACAGAGGCTCATCATCTGCTCCGCT ATCACCAGCCAGGGCCCGTTGGTGGCTTGGAAGGGTGCCGCACCCAACGA GTCGCCGATCTCAGAGGGGGCATTCGGCCAAGAGGCAGCGGGTTCTTCGG AAGGTGCGGGCAGCGCCGATGGTGGAAACACGATGGGGCAGGCGCACCCC GCGAGGGCGGGTGTTGCTTCATCAAGTGCTGGCGGCGGCGGTGGCAGCGG CAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGTAGCGGCAGCGGCA GTGGGAGTGGCAGCGGGAGCGGGAGCGGCAGTGGCAGTGGAAGTGGTGGC GGTGGGGCCGGATCTGGTGGACGGGCCCGAAGACCTTCGGCAAGGATGCA GCAGTTTCAAGACGCCAACGCGCAGAAGGAGCGGGACAGGGAGGCAAGGA AGGCGAAGGAGGGGGGGGGACGAGCCCAACCGCCAGCGCCAGCACCAGCA CCAGCGCCAGCTAGCGACGCCGGGGTTGCTTCAGGGGGAGCGAACAGCAA CACCGGCAACGCGGGCGGGGGTGGGACGAGAGAAACGCGGGCGGGGCCGA AGGACAAGATCGGTAGCCTGGAGACTTCAGAGCTCATTTTTCAGGCGGGA GAGAAGAGCCCAGAGAGCGACTACCACAAGAACATGGACGCCAACACCTT CATGAACTGGCTGGACCTGCGCCTCAAGCCTGCCTTTGAGGCCTTGTTCC CCGACCACAAAATGGTCCTCATCCTAGACAATGCCCCTTATCATCAC
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Coding sequence (CDS) from alignment at C-linearis_contig94:42555..43901-

>mRNA_C-linearis_contig94.16927.1 ID=mRNA_C-linearis_contig94.16927.1|Name=mRNA_C-linearis_contig94.16927.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at C-linearis_contig94:42555..43901- (Chordaria linearis ClinC8C monoicous)
GAGGCGCTTTCGGAAAGGAACGCCATCATCAGGACCTCCAACCTCCTCGG
CTACGACGATGATACCGTCAGGAAAATCATCAAGGAGTTTCGGGGCAACA
ACTGCGAAGCTGTTCCCGTCAGGGACGGCGCCGCGCGAGGCCACGGCAAG
AGAGACCAACTCACCGCCGAAACCGCGCATCACCTCGTCCGCTTCTTTGA
GAAGGCGCACTTGACGAAGAGGAGTGTTGCCTCTAAAGCCCTTGCGAACA
TGCTTAGGAATCCCGCCGACGTGGACGACATGGAGGACCGGGACAGGGTG
CCCGTGGACCTCTCCCCCAAGACCGTTCGCAACTGGCTCAACCGGCTAGG
GATCACGTACCGCGCGGGAAAGCACGGCCGCAAGGTACCGGACGAGCGCA
AGGCACGTGTGCGAGAGTACCTGATCGATCTTGCCCAAGCGCTGGCGCTG
GAGAAGGCCGGCACCCACAAGTTGGTGTACATGGACGAGTCGTACGTCAA
CCTCAATCACAGCAGGTCCAAGTCCTGGTACGAGAAGGATAGGAAGGACC
TGACGGGGTTTCCTACCGGCAAGGGACAGAGGCTCATCATCTGCTCCGCT
ATCACCAGCCAGGGCCCGAGGCGCTTTCGGAAAGGAACGCCATCATCAGG
ACCTCCAACCTCCTCGGCTACGACGATGATACCGTCAGGAAAATCATCAA
GGAGTTTCGGGGCAACAACTGCGAAGCTGTTCCCGTCAGGGACGGCGCCG
CGCGAGGCCACGGCAAGAGAGACCAACTCACCGCCGAAACCGCGCATCAC
CTCGTCCGCTTCTTTGAGAAGGCGCACTTGACGAAGAGGAGTGTTGCCTC
TAAAGCCCTTGCGAACATGCTTAGGAATCCCGCCGACGTGGACGACATGG
AGGACCGGGACAGGGTGCCCGTGGACCTCTCCCCCAAGACCGTTCGCAAC
TGGCTCAACCGGCTAGGGATCACGTACCGCGCGGGAAAGCACGGCCGCAA
GGTACCGGACGAGCGCAAGGCACGTGTGCGAGAGTACCTGATCGATCTTG
CCCAAGCGCTGGCGCTGGAGAAGGCCGGCACCCACAAGTTGGTGTACATG
GACGAGTCGTACGTCAACCTCAATCACAGCAGGTCCAAGTCCTGGTACGA
GAAGGATAGGAAGGACCTGACGGGGTTTCCTACCGGCAAGGGACAGAGGC
TCATCATCTGCTCCGCTATCACCAGCCAGGGCCCCCTGGAGACTTCAGAG
CTCATTTTTCAGGCGGGAGAGAAGAGCCCAGAGAGCGACTACCACAAGAA
CATGGACGCCAACACCTTCATGAACTGGCTGGACCTGCGCCTCAAGCCTG
CCTTTGAGGCCTTGTTCCCCGACCACAAAATGGTCCTCATCCTAGACAAT
GCCCCTTATCATCACCCTGGAGACTTCAGAGCTCATTTTTCAGGCGGGAG
AGAAGAGCCCAGAGAGCGACTACCACAAGAACATGGACGCCAACACCTTC
ATGAACTGGCTGGACCTGCGCCTCAAGCCTGCCTTTGAGGCCTTGTTCCC
CGACCACAAAATGGTCCTCATCCTAGACAATGCCCCTTATCATCAC
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