Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 195 |
| Cds size | 195 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930796.1353512-CDS-C-linearis_contig93:262508..262596 | 1622930796.1353512-CDS-C-linearis_contig93:262508..262596 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 262509..262596 + |
| 1690881254.6731224-CDS-C-linearis_contig93:262508..262596 | 1690881254.6731224-CDS-C-linearis_contig93:262508..262596 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 262509..262596 + |
| 1622930796.1491518-CDS-C-linearis_contig93:262626..262733 | 1622930796.1491518-CDS-C-linearis_contig93:262626..262733 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 262627..262733 + |
| 1690881254.6825614-CDS-C-linearis_contig93:262626..262733 | 1690881254.6825614-CDS-C-linearis_contig93:262626..262733 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 262627..262733 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig93.16906.1 >prot_C-linearis_contig93.16906.1 ID=prot_C-linearis_contig93.16906.1|Name=mRNA_C-linearis_contig93.16906.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=65bp
MHAVCVCFRPIYFGDSPFRSRRDVYYTLRLYFSVQLEPTGVTQEGVNTGA
FFFFFCFFFAPPSSC back to topmRNA from alignment at C-linearis_contig93:262509..262733+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig93.16906.1 ID=mRNA_C-linearis_contig93.16906.1|Name=mRNA_C-linearis_contig93.16906.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=225bp|location=Sequence derived from alignment at C-linearis_contig93:262509..262733+ (Chordaria linearis ClinC8C monoicous)
ATGCATGCAGTATGTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGTCC
CTTCCGATCAAGGCGAGACGTGTACTACACGTTGCGGTGTATTTAGAGTA
CGTAATACACTTGTTCAGTGTATTTTTCTGTACAACTAGAACCAACCGGG
GTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCTTTTTCTGTTT
CTTTTTTGCCCCACCTTCCTCCTGC back to topCoding sequence (CDS) from alignment at C-linearis_contig93:262509..262733+ >mRNA_C-linearis_contig93.16906.1 ID=mRNA_C-linearis_contig93.16906.1|Name=mRNA_C-linearis_contig93.16906.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at C-linearis_contig93:262509..262733+ (Chordaria linearis ClinC8C monoicous)
ATGCATGCAGTATGTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGTCC
CTTCCGATCAAGGCGAGACGTGTACTACACGTTGCGGTATGCATGCAGTA
TGTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGTCCCTTCCGATCAAG
GCGAGACGTGTACTACACGTTGCGGTTGTATTTTTCTGTACAACTAGAAC
CAACCGGGGTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCTTT
TTCTGTTTCTTTTTTGCCCCACCTTCCTCCTGCTGTATTTTTCTGTACAA
CTAGAACCAACCGGGGTCACACAGGAGGGGGTAAACACTGGGGCTTTTTT
CTTCTTTTTCTGTTTCTTTTTTGCCCCACCTTCCTCCTGC back to top
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