mRNA_C-linearis_contig92.16852.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 142 bits (357), Expect = 9.100e-41 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPGGVYVTPLHVAATKGFCQGLVVLIDA 267
QTPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHH+V+H HLAVSK+LIEAGADLE+R GG TPLHVAATKGFCQG+ +L+D+
Sbjct: 30 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKD-TPLHVAATKGFCQGMKLLMDS 117
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.940e-37 Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPGGVYVTPLHVAATKGFCQ 243
QTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHHAV+HKHLAVSK+LIEAGADL++RPGG+ TPLHVAATKGFCQ
Sbjct: 420 QTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGID-TPLHVAATKGFCQ 499
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.160e-26 Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1
Query: 4 TPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPG 192
TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYTALHH+V+H+HLAVS LIEAGADLE+RPG
Sbjct: 31 TPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPG 93
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 110 bits (275), Expect = 3.630e-26 Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPGGVYVTPLHVAATKGFCQGLVVLIDAGANVDS 285
+TPLM A +G RVVR LLR GA VSVAD+DG TALH ++ +KHLAVSK L++AGA +E+R GV TPLHVAA KGF +G+V+LI AGANVDS
Sbjct: 40 RTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEAR--GVDGTPLHVAAAKGFHKGMVMLIHAGANVDS 132
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 9.060e-22 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 16 VASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPG-----GVYVTPLHVAATKGFCQGLVVLIDAG 270
VAS +G RVVR LLR GA VS AD+DG TALH ++ +KHLAVSK L++AGADLE+R GV TPLHVAA KGF +G+V+LI AG
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAG 126
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 3.870e-21 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 4 TPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPGGVYV--------TPLHVAATKGFCQGLVVLIDAGANVDS 285
T LM A+ G R+VR LLR GA VSV+ DG+TALH A+ ++LAV+K LI+AGA++E++ V + TPLH+AA +GFC+G+V LI+AGANVDS
Sbjct: 54 TALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDS 155
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.880e-20 Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSK 150
QTPLMVASVIG SRVVRDLLRQGASVSVADSDGYTALHHAV+HKHLAVSK
Sbjct: 36 QTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK 85
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A7X3XUE7_9BACT (Uncharacterized protein n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3XUE7_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 8.120e-10 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLES--RPGGVYVTPLHVAATKGFCQGLVVLIDAGANVD 282
+ P+ A+ G VR LLRQGA V+ A SDG TALH A + +A++K L+ AGA + R GG TPLH+A+ G + ++++ GA+ D
Sbjct: 45 EAPVADAAERGDLEAVRALLRQGADVNTAQSDGMTALHWAASNNDIAIAKALLYAGATYRATTRIGGY--TPLHLASRGGHAEVARLILEDGADPD 138
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A0U5GCP2_ASPCI (BZIP domain-containing protein n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5GCP2_ASPCI) HSP 1 Score: 59.3 bits (142), Expect = 2.990e-8 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEAGADLESRPGGVYV------TPLHVAATKGFCQGLVVLIDAGANV 279
++P+ A+V G + VVR LL GA V D D + LH A H++ + V + LIE A+ E + TPLH+A +GF +G+++LI +GA++
Sbjct: 210 RSPIFHAAVGGHNGVVRLLLSNGARVGHVDCDNRSVLHWAAHYQRIDVLQTLIEHWAEHERESYDIDAYDDHGWTPLHLAVERGFEEGVLLLIQSGADM 308
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Match: A0A1V6RZL9_9EURO (BZIP domain-containing protein n=1 Tax=Penicillium vulpinum TaxID=29845 RepID=A0A1V6RZL9_9EURO) HSP 1 Score: 56.2 bits (134), Expect = 3.770e-7 Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 1 QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELI------EAGADLESRPGGVYVTPLHVAATKGFCQGLVVLIDAGANVDS 285
+TPL+ A + VVR LL GA ++V D +G + LH AV ++ L + + L+ E DL++ + TPLH++ + F G+++L+ AGA+V++
Sbjct: 226 RTPLIYAIIENHDPVVRLLLSHGARIAVYDREGRSGLHWAVLYRRLGILQHLLDHRAKYERSLDLDAYDNAGW-TPLHMSIDRAFEAGVLMLLQAGADVNA 325 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig92.16852.1 >prot_C-linearis_contig92.16852.1 ID=prot_C-linearis_contig92.16852.1|Name=mRNA_C-linearis_contig92.16852.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=91bp MVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVHHKHLAVSKELIEback to top mRNA from alignment at C-linearis_contig92:47655..47939- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig92.16852.1 ID=mRNA_C-linearis_contig92.16852.1|Name=mRNA_C-linearis_contig92.16852.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=285bp|location=Sequence derived from alignment at C-linearis_contig92:47655..47939- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig92:47655..47939- >mRNA_C-linearis_contig92.16852.1 ID=mRNA_C-linearis_contig92.16852.1|Name=mRNA_C-linearis_contig92.16852.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=546bp|location=Sequence derived from alignment at C-linearis_contig92:47655..47939- (Chordaria linearis ClinC8C monoicous)back to top |