mRNA_C-linearis_contig91.16798.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A6H5K3T2_9PHAE (TPM_phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3T2_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 3.080e-146 Identity = 224/277 (80.87%), Postives = 244/277 (88.09%), Query Frame = 1
Query: 43 MMMAPLHATACLVALAPLVSGFHVP-GLALRQQVVGTPSAVWCSSSSSSSAALSPVRMAADSSSRQDSDGAMTRTGALRKAAGALLGAGLALPALVAVAPLEAQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPPDLKKVASDKAVLDSIGKR 870
M++AP HA ACLVA+APL SGFHVP G ALRQQ G S S +A SPV M A ++ D+ G +TRTGAL++AA L+GAG+ALPALVAVAPLEAQARK GVNRPDLLPKEQTNVIDLVSMLTKGQ KRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSG VNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFV+DNGVDGAII+AVDSITLCLRS++GFCVDPPDLKKVA+D+AVL+SIG+R
Sbjct: 1 MILAPAHALACLVAIAPLSSGFHVPAGPALRQQAGG-------SKSIGRAAGWSPVMMTAGNNDGPDTSGPVTRTGALQRAAAGLIGAGVALPALVAVAPLEAQARKAGVNRPDLLPKEQTNVIDLVSMLTKGQVKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKVANDQAVLESIGRR 270
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A7R9YCX5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX5_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.670e-59 Identity = 98/163 (60.12%), Postives = 121/163 (74.23%), Query Frame = 1
Query: 343 EAQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPPDLKKV 831
EA AR GV++P+LLPKE+ NV+DL +LT GQ +R+ +Q + +EK TG R+R+L Q+YPETPGLAVKDYW VD+ TIV+V D G RK N+LNFNVGD RL LPPQFW RLQN YGN+F+V++NG D AI+ AVD I CLR G+CVDP D KV
Sbjct: 19 EAAARPEGVDKPELLPKEKVNVVDLEKLLTSGQRQRLEEQTKAIEKETGCRIRVLTQRYPETPGLAVKDYWAVDENTIVIVADKGGFGRKGAVTNLLNFNVGDNFRLSLPPQFWTRLQNSYGNKFYVEENGDDKAILRAVDVINSCLRR--GYCVDPRDALKV 179
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A7S4JNH9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JNH9_9EUKA) HSP 1 Score: 201 bits (510), Expect = 1.750e-59 Identity = 107/177 (60.45%), Postives = 129/177 (72.88%), Query Frame = 1
Query: 289 ALLGAGLALPALVAVAPLEAQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGV-NILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPP 816
A+LG GL L + + P A AR GVN+P+LLP QTNVIDL LT GQ K ++KQL DLEKATG +LR+LCQ YP TPGLA+KDYW +DD++IV+VVD G K GGV NILNFNV DG++L LP QFW RLQ+ +GN FFV+DNG D AI AVD+I CLR + +CVD P
Sbjct: 16 AVLGTGLLLAS--GLLPGAAFARPEGVNKPELLPSYQTNVIDLQRFLTSGQVKAMDKQLADLEKATGIKLRVLCQSYPNTPGLAIKDYWGLDDRSIVLVVDKGQS--KGGGVANILNFNVADGIKLSLPNQFWTRLQSTFGNNFFVRDNGEDIAITRAVDTIDYCLRDELAYCVDVP 188
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A7S3B305_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B305_9EUKA) HSP 1 Score: 197 bits (500), Expect = 9.580e-58 Identity = 98/157 (62.42%), Postives = 116/157 (73.89%), Query Frame = 1
Query: 346 AQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPP 816
A AR GVN+P+LLPKEQTNVIDL LT GQ K I+KQL LE ATG +LR+LCQ YP TPGLA+KDYW +DD++IVM+VD G G NILNFNV DG++L LP QFW RLQ+ +GN FFVK+NG D AI AVD+I CLR + +CVD P
Sbjct: 54 AVARPEGVNKPELLPKEQTNVIDLQRFLTSGQVKAIDKQLAALETATGVKLRVLCQSYPNTPGLAIKDYWGLDDRSIVMIVDKG----TKGTANILNFNVADGIKLSLPNQFWTRLQSTFGNNFFVKENGEDIAITRAVDTIDYCLRDELAYCVDVP 206
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A6V1T667_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T667_HETAK) HSP 1 Score: 196 bits (497), Expect = 1.860e-57 Identity = 98/166 (59.04%), Postives = 124/166 (74.70%), Query Frame = 1
Query: 325 VAVAPLEAQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKS--GGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPP 816
+AVAP + AR GVN+P+LLP EQTNVID V MLTKGQ R++K L LEK TGY+LR+LCQ YP TPGLA++D+W VD+KT+V+V D G R + G N+LNFNVG GL L LP +FW RLQ++YGN+FFV+D G D A++ AV++I CLR G+CVD P
Sbjct: 63 IAVAPAVSIARPEGVNKPELLPSEQTNVIDTVKMLTKGQVGRLDKLLAKLEKDTGYKLRVLCQSYPNTPGLAIRDFWGVDEKTVVLVADEGTFGRNAARGPANLLNFNVGSGLDLALPARFWVRLQSEYGNKFFVEDVGKDQAVLTAVEAIAYCLRQ--GYCVDVP 226
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A7S1UBQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ0_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.060e-55 Identity = 94/162 (58.02%), Postives = 117/162 (72.22%), Query Frame = 1
Query: 346 AQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPPDLKKV 831
A AR GVN+P+LLPKE+ NVIDL +LT GQ ++ + + EK+TG +LR+L Q+YPETPGLA+KDYW VD+ TIV+V D G RK N+LNFNVGD RL LP FWQRLQN YGN+F+V++NG D AI+ AVD+I CL+ GFC DP D KV
Sbjct: 58 ANARPEGVNKPELLPKEKVNVIDLEKLLTTGQRNKLQELTVETEKSTGVKLRILTQRYPETPGLAIKDYWGVDENTIVIVADKGGFGRKGVATNLLNFNVGDAFRLSLPATFWQRLQNFYGNKFYVEENGDDKAILRAVDTINACLKR--GFCNDPKDALKV 217
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A7S0Q6K1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6K1_9EUKA) HSP 1 Score: 186 bits (473), Expect = 4.720e-54 Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 304 GLALPALVAVAPL-EAQARKPGVNRPDLLPKEQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPP 816
GL+ AL PL AR GVN+P+LLP EQTNVIDL LT G+ K ++KQL LEK TG++LR+LCQ+YP TPGLA+KDYW +DD +IVMV D G K NILNFNVG+G +L LP FW RLQ+ +G FFV+DNG D AI A+D+I CLR+ GFC D P
Sbjct: 38 GLSFAALPLALPLLPVHARPEGVNKPELLPTEQTNVIDLERYLTTGEVKNLDKQLAALEKETGFKLRILCQRYPNTPGLAIKDYWGLDDNSIVMVADKG---TKGNSANILNFNVGEGAKLMLPNTFWTRLQSTFGTTFFVRDNGEDVAITRAIDTIDYCLRA--GFCTDVP 204
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: L1J2R5_GUITC (TPM_phosphatase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2R5_GUITC) HSP 1 Score: 186 bits (472), Expect = 2.560e-53 Identity = 95/160 (59.38%), Postives = 120/160 (75.00%), Query Frame = 1
Query: 364 GVNRPDLLPK-EQTNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVD-PPDLKKVAS 837
GVNRPDLLP + NVIDL LTKGQ +++K L LE+ TGY++R+LCQ+YP+TPGLA+KDYW VDDKTIVMVVD G K+G NILNFNVG G+ L LPP FW RL+N +G F+VK+NG D A+I AVD++ CLR GFC D P ++K++A+
Sbjct: 110 GVNRPDLLPPGPKVNVIDLEKFLTKGQVAKMDKLLAKLEEDTGYKMRVLCQRYPQTPGLAIKDYWGVDDKTIVMVVDRGSG--KAGQANILNFNVGQGVELALPPVFWTRLRNFFGTVFYVKENGEDAAVINAVDAVVGCLRQ--GFCTDVPKEMKEIAN 265
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A1E7FLC3_9STRA (TPM_phosphatase domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLC3_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.960e-52 Identity = 95/183 (51.91%), Postives = 123/183 (67.21%), Query Frame = 1
Query: 292 LLGAGLALPALVAVAPLEAQARKPGVNRPDLLPKEQ-TNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKV------DDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPPD 819
++ + LALP ++A P A AR V+RPDLLP E+ NVI LT GQA+RIN L +LEK TG+R+++LCQ YP TPGLA++DYW + DDK IV++VD + G N+LNFNVGDG++ LP FW RL KYG FFV+DNG+D AI A+++I CLRS+ GFC PPD
Sbjct: 4 IIASSLALPVIIAQ-PQTATARLEAVDRPDLLPAEKGLNVIQTEKFLTSGQARRINDMLGNLEKDTGFRVKVLCQNYPNTPGLAIRDYWSLGKDDQKDDKYIVLIVD-----QFGGRGNVLNFNVGDGIKFALPNVFWTRLSGKYGTTFFVRDNGIDVAIETAIEAIVTCLRSEDGFCTSPPD 180
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Match: A0A7S2A156_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A156_TRICV) HSP 1 Score: 178 bits (452), Expect = 5.540e-51 Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 337 PLEAQARKPGVNRPDLLPKEQ-TNVIDLVSMLTKGQAKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKV------DDKTIVMVVDSGDDDRKSGGVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVKDNGVDGAIIAAVDSITLCLRSDSGFCVDPPD 819
P AQAR VNRPDLLPKE NVI + LT GQAKR++ L +LEK TG+R+R+LCQ YP+TPGLA++DYW + DDK +V+VVD + G N+LNFNVGDGL+ LP FW RL KYG F+VK+NG+D AI+ A+++I CLRS+ +CV+ PD
Sbjct: 46 PAPAQARLEAVNRPDLLPKEPGQNVIQIEKFLTSGQAKRMDSMLANLEKDTGFRVRVLCQSYPQTPGLAIRDYWDLGKEDQKDDKYVVLVVD-----QFGGRGNVLNFNVGDGLKFALPNVFWTRLSGKYGTTFYVKENGIDLAIVNAIEAIVTCLRSEDQYCVNVPD 208 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig91.16798.1 >prot_C-linearis_contig91.16798.1 ID=prot_C-linearis_contig91.16798.1|Name=mRNA_C-linearis_contig91.16798.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=277bp MMMAPLHATACLVALAPLVSGFHVPGLALRQQVVGTPSAVWCSSSSSSSAback to top mRNA from alignment at C-linearis_contig91:76131..85123+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig91.16798.1 ID=mRNA_C-linearis_contig91.16798.1|Name=mRNA_C-linearis_contig91.16798.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8993bp|location=Sequence derived from alignment at C-linearis_contig91:76131..85123+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig91:76131..85123+ >mRNA_C-linearis_contig91.16798.1 ID=mRNA_C-linearis_contig91.16798.1|Name=mRNA_C-linearis_contig91.16798.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at C-linearis_contig91:76131..85123+ (Chordaria linearis ClinC8C monoicous)back to top |