mRNA_C-linearis_contig90.16780.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig90.16780.1
Unique NamemRNA_C-linearis_contig90.16780.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: D8LDN0_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.240e-15
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 2 
Query: 1253 DNTCIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTYS 1402
            DNTCIVC + +V+CTLVPCGHHC C+ CAA FEQCPVCR  V+QKI+  S
Sbjct:  112 DNTCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAIS 161
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BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.930e-13
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 2 
Query: 1250 SDNTCIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKT 1396
            +DN CIVC DNEV+CTLVPCGHHC C+ CA+ F  CPVCRT V  KIKT
Sbjct:  740 TDNCCIVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKT 788
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BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: D7FYF6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF6_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.210e-13
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 2 
Query: 1265 IVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKT 1396
            +VC DNEV+CTLVPCGHHC C+ CA+ F  CPVCRT V  KIKT
Sbjct:   39 LVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKT 82
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BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 8.970e-13
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query: 1253 DNTCIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTYS 1402
            DN CIVC + +V+CTLVPCGHHC C+ CAA FEQCPVCR  V+QKI+  S
Sbjct:  628 DNMCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAIS 677
[Close]
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.620e-10
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 2 
Query: 1262 CIVCMDNEVNCTLVPCGHHCTCVNCAAA-FEQCPVCRTIVDQKIKTYSA 1405
            CIVC D  VNCT +PCGHHC C+ CA + F  CPVCR  +D+KIKT SA
Sbjct:  925 CIVCFDRPVNCTFMPCGHHCCCMPCAESMFNLCPVCRVAIDKKIKTISA 973
[Close]
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.340e-9
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 2 
Query: 1256 NTCIVCMDNEVNCTLVPCGHHCTCVNCAAA-FEQCPVCRTIVDQKIKTYSA 1405
            N CIVC D  VNCT VPCGHHC C+ CA +    CPVC   +D+KIKT SA
Sbjct:  848 NACIVCFDRPVNCTFVPCGHHCCCMPCAESKLNLCPVCGVAIDKKIKTISA 898
[Close]
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A7V3CZL7_9BACT (RING-type domain-containing protein n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7V3CZL7_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 2.500e-8
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 2 
Query: 1256 NTCIVCMDNEVNCTLVPCGHHCTCVNCAAAF--EQCPVCRTIVDQKIKTY 1399
            NTC+VC   E NC  VPCGH CTC +CA +    +CP+CR ++ +K+KT+
Sbjct:  235 NTCVVCFSKERNCCFVPCGHLCTCYDCAKSITDNKCPICRAVIKEKVKTF 284
[Close]
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: UPI000F4FF043 (E3 ubiquitin-protein ligase XIAP n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4FF043)

HSP 1 Score: 65.9 bits (159), Expect = 1.260e-7
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 2 
Query: 1262 CIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTYS 1402
            C VCMD++V+   VPCGH  TC+ C+ +  +CP+C T++ QKIKTYS
Sbjct:  416 CKVCMDSDVSIVFVPCGHFVTCMKCSKSLHKCPICCTVIAQKIKTYS 462
[Close]
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: UPI00193A5BE5 (baculoviral IAP repeat-containing protein 8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A5BE5)

HSP 1 Score: 64.7 bits (156), Expect = 2.900e-7
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 2 
Query: 1262 CIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTY 1399
            C +C+D E N   VPCGH  TCV+CA     CP+CR+ V QKIKTY
Sbjct:  413 CKICLDEEANVVFVPCGHLSTCVSCAQRVSNCPICRSYVRQKIKTY 458
[Close]
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: UPI001885041E (baculoviral IAP repeat-containing protein 7-B-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885041E)

HSP 1 Score: 58.2 bits (139), Expect = 3.420e-7
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 2 
Query: 1262 CIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTY 1399
            C VCMD +V    +PCGH  TCVNCA A   CP+CR  +   ++TY
Sbjct:   27 CKVCMDEDVGVVFLPCGHLITCVNCAPALRDCPLCRQPIRGTVRTY 72
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN0_ECTSI1.240e-1570.00Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTY3_9PHAE1.930e-1371.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF6_ECTSI2.210e-1370.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KTC5_9PHAE8.970e-1368.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUU5_9PHAE8.620e-1063.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF4_ECTSI4.340e-960.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7V3CZL7_9BACT2.500e-850.00RING-type domain-containing protein n=1 Tax=Ignavi... [more]
UPI000F4FF0431.260e-753.19E3 ubiquitin-protein ligase XIAP n=1 Tax=Tachysuru... [more]
UPI00193A5BE52.900e-756.52baculoviral IAP repeat-containing protein 8-like n... [more]
UPI001885041E3.420e-750.00baculoviral IAP repeat-containing protein 7-B-like... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:532624..536980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.9
Seed ortholog evalue5e-14
Seed eggNOG ortholog2880.D8LDN0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Zinc finger, C3HC4 type (RING finger)
EggNOG OGs2E5R0@1,2SCHW@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1946
Cds size1263
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16780.1prot_C-linearis_contig90.16780.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig90 533583..536416 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930776.3228636-UTR-C-linearis_contig90:532623..5327411622930776.3228636-UTR-C-linearis_contig90:532623..532741Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 532624..532741 +
1690881244.4211113-UTR-C-linearis_contig90:532623..5327411690881244.4211113-UTR-C-linearis_contig90:532623..532741Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 532624..532741 +
1622930776.3451598-UTR-C-linearis_contig90:533555..5335821622930776.3451598-UTR-C-linearis_contig90:533555..533582Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 533556..533582 +
1690881244.437236-UTR-C-linearis_contig90:533555..5335821690881244.437236-UTR-C-linearis_contig90:533555..533582Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 533556..533582 +
1622930776.5943897-UTR-C-linearis_contig90:536416..5366251622930776.5943897-UTR-C-linearis_contig90:536416..536625Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 536417..536625 +
1690881244.5083714-UTR-C-linearis_contig90:536416..5366251690881244.5083714-UTR-C-linearis_contig90:536416..536625Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 536417..536625 +
1622930776.6139011-UTR-C-linearis_contig90:536651..5369801622930776.6139011-UTR-C-linearis_contig90:536651..536980Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 536652..536980 +
1690881244.5190763-UTR-C-linearis_contig90:536651..5369801690881244.5190763-UTR-C-linearis_contig90:536651..536980Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 536652..536980 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930776.363032-CDS-C-linearis_contig90:533582..5339461622930776.363032-CDS-C-linearis_contig90:533582..533946Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 533583..533946 +
1690881244.4485683-CDS-C-linearis_contig90:533582..5339461690881244.4485683-CDS-C-linearis_contig90:533582..533946Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 533583..533946 +
1622930776.3785923-CDS-C-linearis_contig90:534254..5345001622930776.3785923-CDS-C-linearis_contig90:534254..534500Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 534255..534500 +
1690881244.4589453-CDS-C-linearis_contig90:534254..5345001690881244.4589453-CDS-C-linearis_contig90:534254..534500Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 534255..534500 +
1622930776.3934643-CDS-C-linearis_contig90:534855..5350861622930776.3934643-CDS-C-linearis_contig90:534855..535086Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 534856..535086 +
1690881244.4688659-CDS-C-linearis_contig90:534855..5350861690881244.4688659-CDS-C-linearis_contig90:534855..535086Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 534856..535086 +
1622930776.4691813-CDS-C-linearis_contig90:535439..5356401622930776.4691813-CDS-C-linearis_contig90:535439..535640Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 535440..535640 +
1690881244.4789898-CDS-C-linearis_contig90:535439..5356401690881244.4789898-CDS-C-linearis_contig90:535439..535640Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 535440..535640 +
1622930776.489846-CDS-C-linearis_contig90:535924..5360041622930776.489846-CDS-C-linearis_contig90:535924..536004Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 535925..536004 +
1690881244.4908917-CDS-C-linearis_contig90:535924..5360041690881244.4908917-CDS-C-linearis_contig90:535924..536004Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 535925..536004 +
1622930776.5341058-CDS-C-linearis_contig90:536275..5364161622930776.5341058-CDS-C-linearis_contig90:536275..536416Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 536276..536416 +
1690881244.4995306-CDS-C-linearis_contig90:536275..5364161690881244.4995306-CDS-C-linearis_contig90:536275..536416Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 536276..536416 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig90.16780.1

>prot_C-linearis_contig90.16780.1 ID=prot_C-linearis_contig90.16780.1|Name=mRNA_C-linearis_contig90.16780.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=421bp
MNYASDSSSSSDEMGGYGSLGYPIVSPPYFNALGGYPIAAPPFSNGLGGC
PFAAPAYPNGVGGYPNMAAPYLSEGNGHSAETEEVVDESWSKRELKDECA
RLGLRNFNRLNKDRLIRLLNGEPSPPTYNAPQSVTPPNQNGRIVDARETS
SYSIERAGQSWETEGSVDGSWTKRELKYECGRRGLRNFNRLNKYSLVRLL
NEGVRPRPALANPHGGSVNAIQTSSYADSSPFSNERPLYPEENAGSVNES
QPVGGGQAQMRESPAREFSPPTQENAHWAPAPLRPINESATPTNRYGRVV
GASETSAYPAGGGGYGGHPTEAFTPSNEMIGHSEDNSEFVGGSSPVEAPG
NKPHNNHSNTNSRGNKNNSDNTCIVCMDNEVNCTLVPCGHHCTCVNCAAA
FEQCPVCRTIVDQKIKTYSA*
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mRNA from alignment at C-linearis_contig90:532624..536980+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig90.16780.1 ID=mRNA_C-linearis_contig90.16780.1|Name=mRNA_C-linearis_contig90.16780.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4357bp|location=Sequence derived from alignment at C-linearis_contig90:532624..536980+ (Chordaria linearis ClinC8C monoicous)
TGAAGAGTTATATGTTATACCGAACCCTGCGGCCTGCGGCTTCGTTGTGA
CTCGTTGGACGTTTCCCCTGCCTCTCGCTCTGCCCGCTGCCCCTTGACGC
TTCGGCCTTCGCACACAGGTAAGGAAAATACTGTGTGCAGTTCCACGTCC
TGTAAGTAACCTGAGGGTTGAATTCGTACGATGTGACCATGATCAGAGGG
AAAGTAGCACTCGTGTTTCTCTCTCCCCCCCCATCCGGCCTACTCTGTAG
AGAGCGTAAGCAGCACGCCAAGATGTGAATACATGTGCCGTAAGATACCA
GGTGCCCATTGTGAAATGGCGGGCTGTGACGTCCTGTGACGCGGAAGAAT
ACTGGGCTTGATGTGTTTGATGCGTCCAAGGCTCGTGCCATTGTGCCCTT
CCGCTTCTGAGAGTGACACATTCTAGACTATATTGAAATGCCAGAGGCCT
CGACAAGTTCTGCGCGTGGTCCCAGATGGCGGACTCTGCATATGCGTGCA
ATGGCCCCCACGATTGTAACAAGCAAACGGAAATGAAAAGTCGCTTGAAT
TGCACTTTTTTGTCGATTCGAACAAGTCGCGGTGAAAATGATCGCTTCGG
TCGAGGTGTGTGCGATGTCTTTCGCAGCATTGGTAGCGGGAAGACTTTTG
CTCGATTCACGCCAAGAGCTTGCTTGAGTGCGATGTAGTACCACGGGCCG
GTGTGGATTCGCTTCCGTCTTGTTTCGCATAGCATGTGACTGGCGAATAG
TCTAGTCAAGTCGGCTTGTGCAGCATATCTTGCGAGGGTGTCAAAGTGCA
GCGGTTTCGTTGTGTTTAGATCCTCTTTCCTCTCCAAACATGTGCACACG
GACAACGGTTTCCAGCCTGATTGCGCCCTTCGCCACTTGCCCCTCACGCC
CTCGATTTTCCTGGGTCTTTCTCGTCAACCAGAGTGGAGCGCCGCCCGAC
CAGCACGGTATGAATTACGCAAGCGATAGTAGCAGCTCCTCGGATGAAAT
GGGCGGCTACGGCTCCTTAGGCTACCCAATCGTTTCGCCACCTTACTTCA
ACGCCCTCGGAGGTTACCCAATCGCGGCACCACCTTTCTCAAACGGCTTA
GGAGGCTGCCCGTTCGCGGCACCAGCTTACCCAAACGGTGTAGGAGGCTA
CCCAAACATGGCAGCACCTTACTTAAGTGAGGGTAACGGCCACTCGGCGG
AGACGGAGGAAGTCGTGGATGAGTCTTGGTCGAAGAGGGAACTGAAGGAC
GAATGCGCGAGACTCGGGCTCAGGAACTTTAACCGTCTAAACAAGGATCG
CCTCATTCGATTACTCAACGGAGGTGTGAACAATACTATTTATGTTCTCC
GCTTTCTCTCTTCATCGTCTAAACCGCACCAACATGCGCTGGGATCTGTC
TGGTCCCTTGGGTATTGGGTGCGCTTTTCACGTCTTGCCTGTCTTGTCCC
GCTCGAAGGAACCAACAGGACAGGCGCGTAGGCATAAAGACATAAAGACA
GCGTTAGCGAACAGCACTATGGGCTCAGTGTTTCGTTTAATAACGAGAGG
GTTCTCCAATTATTCGCCTCTGGACACGCCCTCCCTGTTTTCCCCGCGCA
TGTGCACACTCGTTTCTGGATCTTTCTGCAGAACCCTCCCCTCCCACCTA
CAACGCCCCCCAGAGTGTGACGCCGCCCAACCAGAATGGCAGGATTGTCG
ACGCACGCGAGACGAGCAGCTATTCGATCGAGAGGGCCGGCCAGTCATGG
GAGACTGAGGGATCTGTGGACGGTTCTTGGACGAAGAGGGAACTGAAGTA
CGAATGCGGGAGACGCGGGCTCAGGAACTTTAACCGTCTAAACAAGTATT
CCCTTGTTCGGTTACTCAACGAAGGAGGTGTGTGGATGGGCCAGCCCCAC
GTTTCTCTGCTGTAATTGTCTAAGCCGCATCATTAGGACCAGTGTGCGCT
CGGGTCTGTGTGGTCCTGTTTGCGCATGGGGTGGCCACTTTGTGGGTGGT
CACTTTGTGTCTCTTGTACATAGGTACGGCCTCGTGCGTTGCGCCCAACG
CAGCAGTACAAACAATCAACAGCAAAGCGAGCGACGAAGGAGGGGGCGTT
GGTTCACAGCATTCAATTGATTTAGAACCCGCTCAGCGGTAGGGTTATCA
ATAATTGATCCTCTAAAATCTGCCCCCCTTAATTTGGCCCCTCGTGTACT
CCCTATTCATGCGTTTCTCGGCATTTCTGCAGTACGTCCCCGTCCAGCGC
TGGCCAACCCCCATGGTGGGAGTGTCAACGCAATCCAGACGAGCAGCTAT
GCAGACTCGTCGCCGTTCTCAAACGAGAGACCCCTCTACCCGGAGGAGAA
CGCAGGGTCGGTGAACGAGTCACAGCCTGTTGGAGGTGGCCAAGCGCAAA
TGCGGGAGAGTCCGGCCCGCGAGTTTTCCCCGCCCACACAAGAGAACGCC
CATTGGGCTCCTGGTATGTGGATGGGTCCACTTTGCGCTCCTGTACTGTC
CGAGCCGCACCTTTCGATATCAACTTGCGTCGGGATCCGTCTGGCCCGCT
TGCGTCGCATATGAGATGCGTTGTTCGTCACGTGATTGTCCCGTCCCGCT
ATGTGCGTTGCGCCGAACGCAGCAGTCGGAGGAGCAAACATGGAAAGCGA
GTACTTGCATGTACCTGGTATGTACAGCATGAAAGGAGTCGGTCGGTCCA
CGCTTTTACGGGCTAGATTTAGGGTAGTGGGAGATTTATCCCCTAGTATT
TTCCTCTAAACGCGCCTCCTCCAACAGCGCTGTACGTACTCCTTACGTTT
TTTTTTGTTTCGGCAGCACCTCTCCGTCCCATCAATGAGAGTGCCACGCC
GACCAACCGCTACGGTAGGGTTGTCGGCGCAAGCGAGACGAGTGCCTACC
CTGCTGGAGGGGGCGGCTATGGGGGCCACCCAACCGAGGCATTCACTCCC
TCAAACGAAATGATCGGCCACTCGGAGGATAACTCGGAATTCGTGGGCGG
GTCTTCGCCTGTTGAAGGTATTGACGCATGTAGCGGAAGACCCGGGCTCA
GGAATTTTGCACGTCTAGAGAAGGGAGGCCTCATTCTGTTTTTCAACGCC
GGTATGTATGTAGATGGGCCCACTTTTCTCTTCTGTGTCGACGGAGTCAC
ACCATTCAGGACCAATGTTATCCCGGACATACTTTCATTGGCTTTTTCTA
ACACCCTCGGCTACCCGTGCTCGTGCGGCGCCAACGTTGATGTCGCCACG
ACAATATCTCCTTCGCCTTCGTCACCTCGTCACCATCCTGGACCGTCCAA
GCCCCTGGAAACAAGCCTCACAACAACCACAGCAACACCAACAGCAGGGG
CAACAAAAACAACAGCGACAACACCTGCATCGTGAGTACTTTATCAGTTG
TAGTCGATGTGGTACAAGACCATCAAAGGATTTTCGCGTGGTCATCCTTA
CCTCTTGGGTGCAGTACAACAACTGCGGAATGCTCCTATGTATTAAACCT
TGTTTTGGACGTCATTCGTTTCTTTCCGCATCGCACAGCGTGATACATAC
TGCTTTGTGTGCCGTTCATCTTGCTTTTTTCGTGACGTTCCAATCAAACG
ATGACCACGTTTGTGTACGGCTTGATCGGTCGTTTTGTCTGTCGTTCCCC
AGGTGTGCATGGACAACGAAGTTAACTGCACGCTCGTCCCATGCGGACAC
CACTGCACCTGCGTCAACTGCGCGGCTGCGTTCGAGCAGTGCCCGGTCTG
TCGCACCATCGTCGACCAGAAGATCAAGACCTACAGTGCTTGACTTCGCC
GAGCGTCTTTCCTCGGCTGTTGATGTACATTGTCAAGTTGGTGGTATGAG
CCAAACGCGGGTGTAGATTCGATGGGCATGATGCGTCATAGTCAGGTTTC
AACTGGAAGAACTCCCCCTAAACCCGCGTTTCGAATGGGTAATGTTTGGT
GGTCTTTAGTTCAATAGCGACTCCTAAACAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGGGAACAGGTGCCCGCAGTTCTGTGATTGGCCAA
TTTATCTCAATGGATTTTTCCTCCCAAAAAGTTGGCCGATCAGAAACCTG
CGGGCACCCGTCTTTTCTCTCCTCTCTTCGTTCAGCGTGTTACATTGCCG
GTCGCCCCGGTAGTCTAGTAGGTACCCGCGCAGTCTTCTAAGCGCCAGTT
GATGGGTTCGAGCCCCGACGAAGCGAGTTTTTTTCTCCCTTTCGTTCCTG
GTACATCGAAAACTTGCTGCATACCGTAATGTCCTCAGAGATAGCCCCGG
GGGGACATGTATTTTTTTTGCCCACAACGGTCTCCCCAAGGCTATCTCTA
CGGTAGG
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Coding sequence (CDS) from alignment at C-linearis_contig90:532624..536980+

>mRNA_C-linearis_contig90.16780.1 ID=mRNA_C-linearis_contig90.16780.1|Name=mRNA_C-linearis_contig90.16780.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at C-linearis_contig90:532624..536980+ (Chordaria linearis ClinC8C monoicous)
ATGAATTACGCAAGCGATAGTAGCAGCTCCTCGGATGAAATGGGCGGCTA
CGGCTCCTTAGGCTACCCAATCGTTTCGCCACCTTACTTCAACGCCCTCG
GAGGTTACCCAATCGCGGCACCACCTTTCTCAAACGGCTTAGGAGGCTGC
CCGTTCGCGGCACCAGCTTACCCAAACGGTGTAGGAGGCTACCCAAACAT
GGCAGCACCTTACTTAAGTGAGGGTAACGGCCACTCGGCGGAGACGGAGG
AAGTCGTGGATGAGTCTTGGTCGAAGAGGGAACTGAAGGACGAATGCGCG
AGACTCGGGCTCAGGAACTTTAACCGTCTAAACAAGGATCGCCTCATTCG
ATTACTCAACGGAGATGAATTACGCAAGCGATAGTAGCAGCTCCTCGGAT
GAAATGGGCGGCTACGGCTCCTTAGGCTACCCAATCGTTTCGCCACCTTA
CTTCAACGCCCTCGGAGGTTACCCAATCGCGGCACCACCTTTCTCAAACG
GCTTAGGAGGCTGCCCGTTCGCGGCACCAGCTTACCCAAACGGTGTAGGA
GGCTACCCAAACATGGCAGCACCTTACTTAAGTGAGGGTAACGGCCACTC
GGCGGAGACGGAGGAAGTCGTGGATGAGTCTTGGTCGAAGAGGGAACTGA
AGGACGAATGCGCGAGACTCGGGCTCAGGAACTTTAACCGTCTAAACAAG
GATCGCCTCATTCGATTACTCAACGGAGAACCCTCCCCTCCCACCTACAA
CGCCCCCCAGAGTGTGACGCCGCCCAACCAGAATGGCAGGATTGTCGACG
CACGCGAGACGAGCAGCTATTCGATCGAGAGGGCCGGCCAGTCATGGGAG
ACTGAGGGATCTGTGGACGGTTCTTGGACGAAGAGGGAACTGAAGTACGA
ATGCGGGAGACGCGGGCTCAGGAACTTTAACCGTCTAAACAAGTATTCCC
TTGTTCGGTTACTCAACGAAGGAGAACCCTCCCCTCCCACCTACAACGCC
CCCCAGAGTGTGACGCCGCCCAACCAGAATGGCAGGATTGTCGACGCACG
CGAGACGAGCAGCTATTCGATCGAGAGGGCCGGCCAGTCATGGGAGACTG
AGGGATCTGTGGACGGTTCTTGGACGAAGAGGGAACTGAAGTACGAATGC
GGGAGACGCGGGCTCAGGAACTTTAACCGTCTAAACAAGTATTCCCTTGT
TCGGTTACTCAACGAAGGAGTACGTCCCCGTCCAGCGCTGGCCAACCCCC
ATGGTGGGAGTGTCAACGCAATCCAGACGAGCAGCTATGCAGACTCGTCG
CCGTTCTCAAACGAGAGACCCCTCTACCCGGAGGAGAACGCAGGGTCGGT
GAACGAGTCACAGCCTGTTGGAGGTGGCCAAGCGCAAATGCGGGAGAGTC
CGGCCCGCGAGTTTTCCCCGCCCACACAAGAGAACGCCCATTGGGCTCCT
GTACGTCCCCGTCCAGCGCTGGCCAACCCCCATGGTGGGAGTGTCAACGC
AATCCAGACGAGCAGCTATGCAGACTCGTCGCCGTTCTCAAACGAGAGAC
CCCTCTACCCGGAGGAGAACGCAGGGTCGGTGAACGAGTCACAGCCTGTT
GGAGGTGGCCAAGCGCAAATGCGGGAGAGTCCGGCCCGCGAGTTTTCCCC
GCCCACACAAGAGAACGCCCATTGGGCTCCTGCACCTCTCCGTCCCATCA
ATGAGAGTGCCACGCCGACCAACCGCTACGGTAGGGTTGTCGGCGCAAGC
GAGACGAGTGCCTACCCTGCTGGAGGGGGCGGCTATGGGGGCCACCCAAC
CGAGGCATTCACTCCCTCAAACGAAATGATCGGCCACTCGGAGGATAACT
CGGAATTCGTGGGCGGGTCTTCGCCTGTTGAAGCACCTCTCCGTCCCATC
AATGAGAGTGCCACGCCGACCAACCGCTACGGTAGGGTTGTCGGCGCAAG
CGAGACGAGTGCCTACCCTGCTGGAGGGGGCGGCTATGGGGGCCACCCAA
CCGAGGCATTCACTCCCTCAAACGAAATGATCGGCCACTCGGAGGATAAC
TCGGAATTCGTGGGCGGGTCTTCGCCTGTTGAAGCCCCTGGAAACAAGCC
TCACAACAACCACAGCAACACCAACAGCAGGGGCAACAAAAACAACAGCG
ACAACACCTGCATCCCCCTGGAAACAAGCCTCACAACAACCACAGCAACA
CCAACAGCAGGGGCAACAAAAACAACAGCGACAACACCTGCATCGTGTGC
ATGGACAACGAAGTTAACTGCACGCTCGTCCCATGCGGACACCACTGCAC
CTGCGTCAACTGCGCGGCTGCGTTCGAGCAGTGCCCGGTCTGTCGCACCA
TCGTCGACCAGAAGATCAAGACCTACAGTGCTTGAGTGTGCATGGACAAC
GAAGTTAACTGCACGCTCGTCCCATGCGGACACCACTGCACCTGCGTCAA
CTGCGCGGCTGCGTTCGAGCAGTGCCCGGTCTGTCGCACCATCGTCGACC
AGAAGATCAAGACCTACAGTGCTTGA
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