mRNA_C-linearis_contig90.16774.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig90.16774.1
Unique NamemRNA_C-linearis_contig90.16774.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: D7FMS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMS2_ECTSI)

HSP 1 Score: 855 bits (2210), Expect = 1.570e-309
Identity = 448/518 (86.49%), Postives = 467/518 (90.15%), Query Frame = 3
Query:   48 GRHAVLAELLALLVVASGFVPPFLARPLRTAATTTPARHAPVPSSSLQMVSASSQTMDALKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMGWEKESDQMGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWIMARL 1601
            GRH VL  LLAL   A GFVP FLARP+ TAATT        P  SLQMVSA   TMD LK+GIKAVAVGVSGSKPIPEDLV PLIQA+G LD+ANADVEA+ERLASFLGTLFVK++ITETDEKVLAAAAKRRPKLKDVG+VRAGCSAGQVLSLAGGDKASADTQELALKLL GETLD+E+AYRLGKRIFD QQPSTVLCLCVQILRVRYE+PSEWRGLIKAQQETLRVE FNPQV+ DAYQRG+E+GN PR VVQLAEPFDGMDRGELLTPLLAQHLQ KFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSN+D+ERDVEVG GGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFIN+CGASVLVASAFHPSYAEKMMTCAETATD KGCM+VRKGLEGSLGFGL RE EIVCGVRK D SFE MSYTF AKDMGWEKE D MGAKDAKET GNIKSFSLEGSSGDEYFDKR        VKLSS+GLEVGMEWIMARL
Sbjct:    2 GRHTVLVVLLALFTGADGFVPSFLARPITTAATTA------APQRSLQMVSAGVSTMDVLKDGIKAVAVGVSGSKPIPEDLVSPLIQAIGSLDKANADVEALERLASFLGTLFVKNKITETDEKVLAAAAKRRPKLKDVGSVRAGCSAGQVLSLAGGDKASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKESGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQSKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEGSLGFGLARETEIVCGVRKDDGSFEKMSYTFAAKDMGWEKEGDPMGAKDAKETIGNIKSFSLEGSSGDEYFDKR--------VKLSSAGLEVGMEWIMARL 505          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A835YNK2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK2_9STRA)

HSP 1 Score: 389 bits (998), Expect = 1.510e-126
Identity = 224/467 (47.97%), Postives = 302/467 (64.67%), Query Frame = 3
Query:  216 MDALKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRAN-ADVE-AVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGD-KASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQV-ILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMGWEKESDQ-MGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWIMARL 1601
            M  L+ GIKAVAVGV GSKPIP++LVP ++ A+  LD A+ A++E A +RLASFLGTLFVKH I E+D  VL A AKRR +L   G  R GCS+ Q+LS+A GD  ASA+   L   LL GE L   +A  LG+R++D  +P+    L   +LRVRYET  E+ GL++AQ  T+  E    Q      +          R +VQLAEPFDG+DR  LLTPL+A+HLQ+++  +AV+Q G +SGPKYG N  D+A  + +   PF+ SNA++     V   G   PE+G Y+DQ+ +S  L  WV LRRNIIKRPFLATSEK ++SCGASVL+ASAFHPS+ +KM   AE AT    C+IVR+GLEG+LGFGLG+ AE+ CGVR +D  FE M + FG KD+G   E D+ +    +++     + ++  GSSGD  FD        + V ++ +G++  MEW++ +L
Sbjct:    1 MGCLRAGIKAVAVGVKGSKPIPDELVPQILAALETLDGASGAELEPARQRLASFLGTLFVKHNIAESDAFVLTAVAKRRLQLAGEGRSRGGCSSAQLLSVACGDGAASAELLRLCRALLDGEVLSAGEAEALGRRLYDSNEPAAARTLAAHVLRVRYETREEFAGLLRAQAATVDREGERAQTHSCPPFPAPPPLRTHERRIVQLAEPFDGIDRSPLLTPLIARHLQRRWRALAVTQVGPTSGPKYGPNARDLALALGADEAPFMRSNAEVAW--RVARSGY-LPEYGMYIDQEAVSPALAEWVTLRRNIIKRPFLATSEKLVDSCGASVLIASAFHPSFTDKMFNMAEDATAFPACIIVRRGLEGTLGFGLGKPAEVTCGVRGSDGRFERMDFAFGPKDIGLATEMDKPLSDISSEDFAAKCERWAASGSSGDTRFD--------NHVAVTLAGIDKAMEWVLPKL 456          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A6T7WU54_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7WU54_9CRYP)

HSP 1 Score: 291 bits (744), Expect = 1.040e-89
Identity = 172/381 (45.14%), Postives = 227/381 (59.58%), Query Frame = 3
Query:  471 VRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGRE---AGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMGWEKESD---QMGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWIMA 1595
            +RA C A  +L+ A     SA  + LAL+LL G TL  E+A  LG+R+FD  +   +  LC  +LRVRYET  EW GL+ AQ ETL    F          RGR+   +  K R +VQLAEPFDG  R E   PL+A+HLQ+++  V VSQCG SSGPKYG NLL +A  + S   P   SN D+         G D P FGWYV Q + S  L  W  +RRN++KRPFLAT+EK++++ GA VL+ASAFHPS+++KM   AE A+  + C+IVR+G EGSLG  L R AE VCG R+ D + E   + FG  D G    ++   Q+    AK+T G I+ F+  G+SGD  FD         RV L+ +GL+V ME++ A
Sbjct:   15 IRAACLA--LLAAAPAAAGSASLRGLALRLLDGHTLSREEARDLGRRLFDPDEAVELQVLCAHLLRVRYETMDEWCGLLDAQGETLDTGRFGAP-------RGRDILASAGKAR-LVQLAEPFDGTHRSESFAPLIARHLQQRWGAVVVSQCGPSSGPKYGPNLLQLALAL-SPDAPLAASNLDIAE------AGADQPAFGWYVTQGDASGGLGRWGPIRRNVVKRPFLATAEKYLDTAGAGVLLASAFHPSFSDKMFLMAERASAFEACVIVRRGCEGSLGLSLARPAEFVCGRRRPDGTMERFDFAFGPADAGVRPRAEREQQLEGLSAKDTAGKIRRFAAAGASGDAVFD--------DRVALTLAGLDVAMEFVAA 370          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A1G1P5S8_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17 TaxID=1801857 RepID=A0A1G1P5S8_9BACT)

HSP 1 Score: 215 bits (547), Expect = 6.020e-61
Identity = 137/352 (38.92%), Postives = 196/352 (55.68%), Query Frame = 3
Query:  540 QELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKD-MGWEKESDQ-MGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWI 1589
            QE+  +LL  ETLD + + +LG  +F          +   ILRVRYET  E+ GL+++ QET  +E F  +V             +   +VQ+AEPFDG+D+  ++TPLLA+H+Q       VS  GR+SGPK+G NLLD+A G   L   F+  N DL+            P++GWY+ Q+ +S  +D WV+LR  IIKRPFLAT E+F+N   A +++ASAFHP YAEKM+T  E A    G +IVR GLEG+L F L R  +I+C VR  D S+      +  +  +G   E ++ + A   ++    IK ++  G SG E FD R        +K +  G++  M WI
Sbjct:   29 QEICARLLRQETLDQKTSRQLGNFLFSDSAGDAARGMAASILRVRYETAQEYAGLLESLQET--IEGFFCEV------------PEGDPIVQIAEPFDGVDQSYMVTPLLARHVQI-LGYRVVSLVGRNSGPKFGNNLLDVAEG---LQAQFLKRNVDLKCP---------KPDYGWYIHQKNLSRGMDRWVELRLQIIKRPFLATLERFVNPVRAQMIIASAFHPPYAEKMVTVGEGA-GYSGIIIVRNGLEGTLAFPLLRSVKILCSVRGRDGSYRRQELEWNPRQSLGARIEMEEKLTAPALEKNVQLIKEYTAHGRSGHEPFDWR--------IKATCEGIQQAMGWI 344          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A3B0W5T9_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0W5T9_9ZZZZ)

HSP 1 Score: 216 bits (551), Expect = 8.700e-61
Identity = 154/463 (33.26%), Postives = 240/463 (51.84%), Query Frame = 3
Query:  225 LKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVERLASFLGTLFVKHEITETD--EKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMGWEKES--DQMGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWIMARL 1601
            + +GIK+V VG  GSKP+  +LV  +      LD+  ++  A   L +F G L +K    E    E+  +A     P+      + A C+             S D + + + LL  E LD E +  LG+ +F  ++  T   L   ILRVRY +  E+ G++ + QET  + NF        +Q   E       +VQ++EPFDG +R   +TPL+A  +Q      AVS  GR+SGPK+  NLL+IA    +L T F+++  +L +           P++GWY+ Q+ IS  +DAWV+ R  IIKRPFLAT E+FIN  GA +L+ SAFHP+Y E M++ A+TA    G ++V+ GLEG L F L R A++ C VRK D ++E   +TF A D+   K +  ++      K+    IK +     + +E+FD          ++++  G+   ++W+   +
Sbjct:    8 IHQGIKSVGVGKRGSKPLSSELVSAI------LDQLKSNDIAPVALGAFWGGLMIKGLTNEEKRLEEYFSAGTLMNPQRL----IEALCT-----------DISPDIKNICIHLLNKENLDYETSKYLGEFLFSKEKGDTARGLITSILRVRYTSIDEYAGILSSMQET--INNF--------FQHSVEG----EPIVQISEPFDGFNRSYFITPLIASAVQN-LGFRAVSLVGRNSGPKFATNLLNIAQ---ALDTSFLNTAEELNKP---------KPDYGWYIHQKNISPAIDAWVEHRHQIIKRPFLATLERFINPVGAKILITSAFHPNYVETMLSIAQTA-GYAGIIVVQYGLEGGLTFPLRRPAKLFCSVRKQDKTYEQKKFTFDATDILRTKITVEEKFDNPSLKKNIQLIKKYLYNQKTENEWFD--------DHIRITQIGICKAIKWLQKNI 413          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A4P8RIL6_9BACT (Anthranilate phosphoribosyltransferase n=1 Tax=Pontibacter sp. SGAir0037 TaxID=2571030 RepID=A0A4P8RIL6_9BACT)

HSP 1 Score: 209 bits (533), Expect = 4.810e-58
Identity = 158/462 (34.20%), Postives = 240/462 (51.95%), Query Frame = 3
Query:  210 QTMDALKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMG-WEKESDQM-GAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWI 1589
            +T + L +GIK + +G  GSKP+ ++L+  +   +     A  +   +++  +F G L  K    E  EKVL  A+         G  ++   A  +  L   D A A+ +E+ LKLL  E L   +A +LG+ ++  +       +   +LR+RYET  E++GL+ A + T            D Y R R AG +P  VVQLAEPFDG++   L+TPLLAQ  Q+     AV   GRS GPK   N LD+   M      F+ +  +L +          PP FGW +DQQ +S+ LD WVD RR   KRPFLAT EK +N   A VLV S FH +Y EKM+T A  A   KG M++++GLEG+L   + + + I C + KAD +F T S+    ++   +  +SD +  A   ++    ++ F+ +G++ ++ FDKR        V L+ +  + G+ WI
Sbjct:    7 ETDNPLVQGIKVIGIGKHGSKPLSKELITSIYTYL-----AEGEGVPIQK-GTFYGALMAKGPTEE--EKVLLYAS---------GGDKSIPVAEHLYQLLCSD-APAELKEIGLKLLDKEFLSIGEAEKLGQFMYSDEPGEAFRGMAASMLRIRYETDEEYQGLLNAAEATYA----------DQY-RARPAGTRPAVVVQLAEPFDGVEHSYLITPLLAQFFQQA-GYPAVVTMGRSGGPKLALNTLDLYQDM---GCSFIENAGELAQT---------PPAFGWALDQQLLSVALDKWVDRRRLFFKRPFLATLEKVLNPLQAQVLVVSVFHLTYIEKMITLAAMA-GFKGVMVMKRGLEGTLAPSIAKASGITCALIKADGTFITQSFEATQEEFTPFRADSDDVVEALHLQDNVALVRQFAAKGATTNQDFDKR--------VNLAFALYQKGLSWI 417          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A239DFA4_9BACT (Anthranilate phosphoribosyltransferase n=1 Tax=Pontibacter ummariensis TaxID=1610492 RepID=A0A239DFA4_9BACT)

HSP 1 Score: 206 bits (523), Expect = 1.120e-56
Identity = 153/461 (33.19%), Postives = 235/461 (50.98%), Query Frame = 3
Query:  213 TMDALKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMG-WEKESDQMGAKDAKETTGN-IKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWI 1589
            T + L +GIK + +G  GSKP+P D +  +   + +      + E   +  +F G+L  K    E ++++L                 AG  A  + ++   D A A  Q + LKLL  + L  ++A  LG+ +F  +   T   +   +LR+RYET  E++GL++A      V  +NP          REA +    V+QLAEPFDG++   ++TP+L +  Q++   V V+  GRS+GPKY  N LD+      L+  F+  N DL          +  PE+GW +DQ+ +S  LD WV+ RR + KRPFLAT EK +N C A +LV S FH +Y EKM+T A  A    G +++++GLEGSL   + + + I C VR+ D SF T S+    +    +  E+D +      E     I+ F  +G +G+E FDKR        V L+ +    G+EWI
Sbjct:    8 TNNPLLQGIKVIGIGKHGSKPLPADQIEAIAAYLSE------EKEVPIQKGAFYGSLLAKGPTAE-EQRLLP---------------EAGQDAEVIYNMLCAD-APARMQGIGLKLLRKQHLSPDEARTLGEFLFSDEPGETFRGMAASMLRMRYETDEEYQGLMEA-----AVSTYNPAF--------REAPSLQERVIQLAEPFDGVEHSFMITPILGRVFQQEGYPVVVTM-GRSAGPKYALNTLDL---YQELAGQFMQQNNDLT---------LAAPEYGWALDQRLLSPALDQWVNRRRLLFKRPFLATLEKVLNPCQADILVTSVFHITYIEKMITLAGMA-GFTGVIVLKRGLEGSLAPSIAKASGITCAVRQQDGSFLTQSFEANQEAFSTYRAEADALVQDTNAEMNAQLIRQFLSQGFTGEEDFDKR--------VNLAIALYRQGLEWI 410          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: UPI000E0AB2C1 (anthranilate phosphoribosyltransferase n=1 Tax=Botryobacter ruber TaxID=2171629 RepID=UPI000E0AB2C1)

HSP 1 Score: 205 bits (522), Expect = 1.610e-56
Identity = 153/457 (33.48%), Postives = 236/457 (51.64%), Query Frame = 3
Query:  225 LKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMG-WEKESDQMGAKDAKETTGN-IKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWI 1589
            L EGIK + +G  GSKP+P   +  +   +     ++ +V A+++  +F G+L  K+   E ++K+                   G  A  +  +   D A AD +   +KLL  ETL+ ++A  LG  +F          +   +LR+RYET +E++GL++A      +  ++P          R A      +VQLAEPFDG++   ++TP+LA   Q+    V VS  GRS+GPKY  N LDI      L  PF+  N+DL +           P++GW +DQQ +S  LD WVD RR I KRPFLAT EK +N C A +LV S FH +Y +KM+T A  A    G +++++GLEG+L   + + + I C VR+ D SF T S+    +    +  E+D +    A     + I+S+  +G++G+E FDKR        V L+ +  + G+EWI
Sbjct:   12 LLEGIKVIGIGKHGSKPLPGPQIEEIFNYL-----SDKEVIAIQK-GAFYGSLVAKNPTVE-EQKLFKGK---------------GNGAEAIYKMLCQD-APADMKATGVKLLSKETLNADEARILGNFLFSDLPGEAFRGMAASMLRMRYETDAEYQGLMEA-----AIATYSPSF--------RAAPPLDNNLVQLAEPFDGVEHSYMITPILAHVFQEAGYPVVVSM-GRSAGPKYALNTLDI---YKELEAPFLQQNSDLAKPA---------PKYGWALDQQVLSPALDQWVDRRRLIFKRPFLATLEKVLNPCHAGILVTSVFHITYIDKMITLAGMA-GFSGVIVLKRGLEGTLVPSIAKASGITCAVRQPDGSFLTQSFDATHEIYSDFRAEADAVVEHPAAAANADLIRSYISQGATGNEDFDKR--------VNLAIALYQQGLEWI 410          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A5C8K6W1_9BACT (Anthranilate phosphoribosyltransferase n=1 Tax=Pontibacter sp. GY10130 TaxID=2603253 RepID=A0A5C8K6W1_9BACT)

HSP 1 Score: 205 bits (522), Expect = 1.910e-56
Identity = 158/459 (34.42%), Postives = 239/459 (52.07%), Query Frame = 3
Query:  225 LKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVE--RLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTFGAKDMG-WEKESDQMGAKDAKETT-GNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWI 1589
            L EGIK + +G  GSKP+P+DL+  ++Q +        + EA+   +L +F G L  K   TE ++++L A         DVG +       Q L       A A+ QE+ +KLL  E L  E+A  LG  ++      ++  +   +LR+RYET  E++GLI+A   T     F P     A QR        + +VQLAEPFDG++   ++TPLLAQ  Q    ++ +S  GRSSGPK   N  D+      L   F+  N +L +          PP FGW +DQ+ +S  LD WVD RR I+KRPFLATSEK +N   A +L+ S FH +Y EKM+  A  A   KG +I+++GLEG+L   L + + I+C   +AD SF+T ++      +  +  ++D +      E    +I  F+  G++G++ FDKR        V+L+ +    G+ W+
Sbjct:   15 LIEGIKFIGIGKHGSKPLPQDLLEIILQYL--------ETEALVPIQLGAFFGALMAKGP-TEPEKRLLQALVPSAAGTPDVGDLY------QHLC----PDAPANMQEIGIKLLRKEFLTLEEARELGTFLYADSPGESLRGMAASMLRIRYETMEEYQGLIEAATPT-----FTPGFKEPAPQR-------QKVLVQLAEPFDGVEHSYMVTPLLAQAFQND-GLLVISTVGRSSGPKLEVNAHDL---FKHLPGSFITENKELLQA---------PPTFGWALDQKTLSPALDKWVDRRRLILKRPFLATSEKVLNPAHADILITSVFHITYMEKMINLAAMA-GFKGVIILKRGLEGTLAPSLCKASGILCAALQADGSFKTQTFDADTAALAAYRTDADAVVEPLVLEDNLQHINEFATAGATGNQDFDKR--------VRLALALYRTGLAWV 420          
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Match: A0A1G1LML3_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium GWA2_47_8 TaxID=1801840 RepID=A0A1G1LML3_9BACT)

HSP 1 Score: 205 bits (521), Expect = 2.300e-56
Identity = 154/466 (33.05%), Postives = 237/466 (50.86%), Query Frame = 3
Query:  213 TMDALKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANADVEAVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSAGQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTVLCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAGNKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDP-PEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMTCAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYT------FGAKDMGWEKESDQMGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPSRVKLSSSGLEVGMEWI 1589
            T  A+ +GIK V +G  GSKP+  DL+  +++     D     V  + R  +F G LF K  IT  + +   A A         G +      G+++S      A +  QE  +KLL  +TLD + AY++G+ +   ++      L   +LRVRYET  E+ GL+K+ ++++      P               +P  ++QLAEPFDG+D+  ++TPL+AQ+LQ + N   V+  GR+SGPK+G N LD+A    +L+ P    N +L          ++P P FGWY++Q ++S  LD WV+ R  I+KRP  AT EKF+N   A +++ SAFH  Y+EKM   AE A      +++R GLEGSL F L R  +++C  R+ D S+     T      FG K    EK    +     +E    +K FS +  + +  FD+R        VK +  G++  + WI
Sbjct:    7 TEPAIVQGIKTVGIGKKGSKPLTPDLIAEILR-----DLKENKVSDIAR-GAFFGALFSKG-ITLDEMRFDDAFAS--------GTLMNPSRLGKIIS----HDAPSFVQESCVKLLKVQTLDQKSAYKVGEFLLSKEKGEGARGLIASVLRVRYETEEEYSGLLKSFEDSIEPSFRQP-----------VPSGEP--IIQLAEPFDGVDQSYMITPLVAQYLQAQ-NYRVVNLTGRNSGPKFGNNALDLAQ---ALNIPLAKGNQEL----------VNPKPAFGWYINQPDLSKSLDQWVERRWAIVKRPCFATLEKFLNPVKAQIIITSAFHAPYSEKMTRIAENA-GFPASIVIRNGLEGSLAFPLMRPVKLLCSARQKDGSYLREEITLDPQADFGLKVSVEEK----LENPSLEENARLVKEFSQKQITNNTLFDQR--------VKFTCEGVKRALTWI 413          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMS2_ECTSI1.570e-30986.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNK2_9STRA1.510e-12647.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T7WU54_9CRYP1.040e-8945.14Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A1G1P5S8_9BACT6.020e-6138.92Uncharacterized protein n=1 Tax=Omnitrophica WOR_2... [more]
A0A3B0W5T9_9ZZZZ8.700e-6133.26Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A4P8RIL6_9BACT4.810e-5834.20Anthranilate phosphoribosyltransferase n=1 Tax=Pon... [more]
A0A239DFA4_9BACT1.120e-5633.19Anthranilate phosphoribosyltransferase n=1 Tax=Pon... [more]
UPI000E0AB2C11.610e-5633.48anthranilate phosphoribosyltransferase n=1 Tax=Bot... [more]
A0A5C8K6W1_9BACT1.910e-5634.42Anthranilate phosphoribosyltransferase n=1 Tax=Pon... [more]
A0A1G1LML3_9BACT2.300e-5633.05Uncharacterized protein n=1 Tax=Omnitrophica WOR_2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:367615..376322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score179.9
Seed ortholog evalue3.1e-42
Seed eggNOG ortholog1123276.KB893246_gene891
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
EggNOG OGs47KXD@768503,4NJCN@976,COG0547@1,COG0547@2
Ec32 ortholog descriptionGlycosyl transferase, family 3
Ec32 orthologEc-21_000370.1
COG Functional cat.E
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons11
Model size1769
Cds size1563
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930775.4217896-UTR-C-linearis_contig90:367614..3676551622930775.4217896-UTR-C-linearis_contig90:367614..367655Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 367615..367655 +
1690881243.977839-UTR-C-linearis_contig90:367614..3676551690881243.977839-UTR-C-linearis_contig90:367614..367655Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 367615..367655 +
1622930775.6451147-UTR-C-linearis_contig90:376157..3763221622930775.6451147-UTR-C-linearis_contig90:376157..376322Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 376158..376322 +
1690881244.134449-UTR-C-linearis_contig90:376157..3763221690881244.134449-UTR-C-linearis_contig90:376157..376322Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 376158..376322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930775.4708052-CDS-C-linearis_contig90:367655..3677921622930775.4708052-CDS-C-linearis_contig90:367655..367792Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 367656..367792 +
1690881243.994091-CDS-C-linearis_contig90:367655..3677921690881243.994091-CDS-C-linearis_contig90:367655..367792Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 367656..367792 +
1622930775.4844522-CDS-C-linearis_contig90:368476..3686061622930775.4844522-CDS-C-linearis_contig90:368476..368606Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 368477..368606 +
1690881244.0074484-CDS-C-linearis_contig90:368476..3686061690881244.0074484-CDS-C-linearis_contig90:368476..368606Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 368477..368606 +
1622930775.497323-CDS-C-linearis_contig90:369097..3692481622930775.497323-CDS-C-linearis_contig90:369097..369248Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 369098..369248 +
1690881244.0209966-CDS-C-linearis_contig90:369097..3692481690881244.0209966-CDS-C-linearis_contig90:369097..369248Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 369098..369248 +
1622930775.5194895-CDS-C-linearis_contig90:370042..3702291622930775.5194895-CDS-C-linearis_contig90:370042..370229Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 370043..370229 +
1690881244.0342026-CDS-C-linearis_contig90:370042..3702291690881244.0342026-CDS-C-linearis_contig90:370042..370229Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 370043..370229 +
1622930775.5365973-CDS-C-linearis_contig90:370651..3708201622930775.5365973-CDS-C-linearis_contig90:370651..370820Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 370652..370820 +
1690881244.048373-CDS-C-linearis_contig90:370651..3708201690881244.048373-CDS-C-linearis_contig90:370651..370820Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 370652..370820 +
1622930775.5554698-CDS-C-linearis_contig90:371365..3715601622930775.5554698-CDS-C-linearis_contig90:371365..371560Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 371366..371560 +
1690881244.0663745-CDS-C-linearis_contig90:371365..3715601690881244.0663745-CDS-C-linearis_contig90:371365..371560Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 371366..371560 +
1622930775.570832-CDS-C-linearis_contig90:372015..3721881622930775.570832-CDS-C-linearis_contig90:372015..372188Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 372016..372188 +
1690881244.0833395-CDS-C-linearis_contig90:372015..3721881690881244.0833395-CDS-C-linearis_contig90:372015..372188Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 372016..372188 +
1622930775.585651-CDS-C-linearis_contig90:373272..3733881622930775.585651-CDS-C-linearis_contig90:373272..373388Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 373273..373388 +
1690881244.0934172-CDS-C-linearis_contig90:373272..3733881690881244.0934172-CDS-C-linearis_contig90:373272..373388Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 373273..373388 +
1622930775.597593-CDS-C-linearis_contig90:374254..3743761622930775.597593-CDS-C-linearis_contig90:374254..374376Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 374255..374376 +
1690881244.103551-CDS-C-linearis_contig90:374254..3743761690881244.103551-CDS-C-linearis_contig90:374254..374376Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 374255..374376 +
1622930775.6138651-CDS-C-linearis_contig90:375203..3753251622930775.6138651-CDS-C-linearis_contig90:375203..375325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 375204..375325 +
1690881244.1144543-CDS-C-linearis_contig90:375203..3753251690881244.1144543-CDS-C-linearis_contig90:375203..375325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 375204..375325 +
1622930775.6305277-CDS-C-linearis_contig90:376096..3761571622930775.6305277-CDS-C-linearis_contig90:376096..376157Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 376097..376157 +
1690881244.125987-CDS-C-linearis_contig90:376096..3761571690881244.125987-CDS-C-linearis_contig90:376096..376157Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 376097..376157 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16774.1prot_C-linearis_contig90.16774.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig90 367656..376157 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig90.16774.1

>prot_C-linearis_contig90.16774.1 ID=prot_C-linearis_contig90.16774.1|Name=mRNA_C-linearis_contig90.16774.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=521bp
MRGRHAVLAELLALLVVASGFVPPFLARPLRTAATTTPARHAPVPSSSLQ
MVSASSQTMDALKEGIKAVAVGVSGSKPIPEDLVPPLIQAMGKLDRANAD
VEAVERLASFLGTLFVKHEITETDEKVLAAAAKRRPKLKDVGAVRAGCSA
GQVLSLAGGDKASADTQELALKLLGGETLDDEDAYRLGKRIFDGQQPSTV
LCLCVQILRVRYETPSEWRGLIKAQQETLRVENFNPQVILDAYQRGREAG
NKPRAVVQLAEPFDGMDRGELLTPLLAQHLQKKFNVVAVSQCGRSSGPKY
GQNLLDIATGMTSLSTPFVHSNADLERDVEVGMGGIDPPEFGWYVDQQEI
SLELDAWVDLRRNIIKRPFLATSEKFINSCGASVLVASAFHPSYAEKMMT
CAETATDLKGCMIVRKGLEGSLGFGLGREAEIVCGVRKADNSFETMSYTF
GAKDMGWEKESDQMGAKDAKETTGNIKSFSLEGSSGDEYFDKRQVPNQPS
RVKLSSSGLEVGMEWIMARL*
back to top

mRNA from alignment at C-linearis_contig90:367615..376322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig90.16774.1 ID=mRNA_C-linearis_contig90.16774.1|Name=mRNA_C-linearis_contig90.16774.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8708bp|location=Sequence derived from alignment at C-linearis_contig90:367615..376322+ (Chordaria linearis ClinC8C monoicous)
CCTCTAACTCGTAGCATTTGTTTAGACAGACCTGTGCGAGCATGAGGGGC CGACACGCTGTACTCGCTGAGCTGTTGGCGCTCTTGGTAGTCGCGAGCGG GTTCGTGCCTCCTTTCCTCGCCCGCCCCTTGCGCACGGCAGCAACAACGA CACCAGCAAGGCATGCCCCCGTCCCCAGGTAAGAAGTAGTGTTCTGCATG CGGGTACTCTGCGTCGTCTCTCTGACGATTGTCAGCTGAGCTGTAGATAG GGACAGGCTGGGTCGACGCGAAAGTTGGTGTTTTTCCAAGTATTGTGTTG CTCACAGAAGTACCGACCATGTCTCGTGTGCAAATCGAGGAAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACGCGCGGCGGCAT GTTCGTACCTACCCGTCCTACAGCAGTAGTTGCCGTGCTTGCGAACTACG ACAGCACTACCGCTTACCTGTGCAGCATTATTCAGCGACAGCAGCAACAT GCTTGCCATCAGCTCGCGAAGGGTTTTCAAAATGGTCGTGTCTGGAAGGT GCTACTGTAAGACTGCTGTGTGCATTCGGGAAGACTCTTCTTGTGCTACA CACAGCATACAGCAGTATCCTCGTGTTCTGGCTGATTTGTGTTTGCGTTG GGTTGCACCATCATAAATGTTGCGGCAATGCCCGTACGGCGGTGTAAAGA TGCAGCACCTGTGTCCTGCAGTGCATTGTGCGTATGTACACCAATGCATT TATCGAACGCTTCGCTTTTATTACTCCGATTGAAGTGACTAACCGGTCAA CCCTATTCCGGCAAAAACTTTATTCAACTACAGTAAGTTTTTGCTTTGCT TTGCTTTCTCAGCTCATCGCTCCAGATGGTGTCGGCGAGTTCGCAAACCA TGGATGCCCTGAAGGAAGGCATCAAAGCTGTCGCGGTCGGCGTGAGCGGT AGCAAGCCCATCCCGGAGGATCTAGTCCCACCGCTCATCCAGGTGCGGTT TCATCTTGCCGTGATCTCCGTACACGGCTTGTGCGTGATGGGTTCGAGGC GGACTATCAATAGGCTGTGGGAACGCCACTACGAACATCGTTAATGAATA CGGAGTAAATACTTCGTTAATATTTTAACGAGCAGTGTTCAGCACGGCGG AACCAAGCCAAAATATCCGCCGCAAGGTCGACGCTGATAGGGTGGGCGGA GCTACCGGCAGTATTTCCAGGGCGTTCAGGCCCGAATTTTGCATCTCTAT CCCGATATGATGATGATCATGATGATCATGATCATGATGATCAAGATCAG CGCTTGTGTCGGAAAACAATGACCACAGCAGTGGTGAGAGAAAGGGTACG TGTTGTCGATGTCAATCTCAATGTCAAGTACCAAACGTTTGATCATGATC GATCGATTTTCAACGACAGTTCTCTCTGTCTCTCTGTCTGTCTCTCTCTT TCTCTCCATCTCTCTCTATCGCCAACTGGCCAGGCGATGGGCAAGCTAGA CAGGGCAAACGCCGACGTGGAGGCCGTGGAGCGTCTCGCTTCCTTCCTCG GGACGCTGTTTGTTAAGCACGAAATCACCGAAACGGACGAGAAGGTGCTA GCAGCAGCGGCCAAGAGAAGGCCCAAACTTAAGGGTGAGTGGATTGGGTG GTGGGTCATCGTGTCGTGGTTGGGTATATTGTAGCGACTTCCTCGCACAC CTGCGCTCCACGGATGTCGCTTTCGGTTGAGTGTCCTCTCGAAGGTTTCG CAGCCCGCCTGCCACCCTCATCGCGGAAGCTCGAAAATTTCAGACATTCC TTGAAAGGCGCAGGCACCTCTCTTCTGTGTACCCTTTATTTCATCTAGTT GGGAGTACCTCGAGACGATGTATGCCATGCGAGGATATGCTAGAATAGGT TGCCTTGTTGCGCCCCGTGTCGTTCCGGGGAGTTGGACTAGGGGTGGACC TAGGAAGCTGCCCTTGATTTGATTTAATTTGACGGCAGCTGCTCCTGGAG AGTACCGTAGGGTGCGGCAGTCGATCAGTTGGCATTCGTTTGGTGAATTT TTTGGGGTGTTCTCTCCTGTGCACTCGGTTATAGTTGGATGCTGCTAGAT GTCCATGTCTACGGAAAGATGCTGTCGAGTCCGCTTGAAACCGTCAACTT GAAACCGCCGGCTTGAAACCGTCAAGGGCCAGACGAGCAGTGCTCGTTTG CATGCGTGCGTATGACTCCTGTTGCAAATGGACGTGCCATGCTTGTCTTT TGCGTATGACATGACACTATTCTATCATGTTCGCCCTTCTCGACAAGGAC GTGGTAGGTTTACCTTCTGACGTCATATATTTTCCTTTTTTTTTTTTTTT GCATTTTTCGACGAACACGCACTTCTTTGTGAAGCCTACCTACTGCTGTC TTTTTCTCTTTTCGCGTTTCTCGAACAGACGTGGGGGCTGTTAGGGCCGG CTGCAGCGCCGGTCAGGTGCTCTCCTTGGCCGGGGGCGACAAGGCCAGCG CCGACACACAGGAGCTGGCTCTCAAGCTGCTGGGGGGAGAGACTCTGGAC GATGAGGATGCATACCGGTTAGGGAAGCGTATCTTCGATGGGCAGCAGCC GTCGACTGTGCTATGGTGAGAGGGGAAGAAGAAAAAGAGAGGAGGGGGGA GGGGGGAAAGGAGACGCACTCAAGTGTTGGGCCCTCTGCCGCCACCCGTA GAAGGCCGGAGAAGAAGAGCCACCCCCCCGAAGAACGTGTGCTGAGTTAT TTTCCGTATTGTATTGTTGTGTTTTCGAGGTTTTAGTTTTGATTGGCGCA TGTTTTTGTGCAGTACTAGGGTTACCGCGCCGGGTACTCTTTCTCGAGAT TGTGAAGAATCAACCAACGAAAATAGAGTGTGACCGAGGCTGGCTGTGCG GATCCGGAGGTGAGGTGCACAAGAATCCGCCGCCTAGTGCTTTGTCGGTC CCAACGTCTTCATTCTCATCCCATCATCATCATTCCCAACAACTTCTTGC TTATCATGGTTCTCTTCGCGTGCTGTTTGGATGGCAGCCTTTGCGTGCAG ATTTTGCGCGTGAGATACGAGACCCCCAGCGAGTGGCGCGGCCTCATCAA GGCGCAGCAGGAGACGTTGAGGGTCGAGAACTTCAACCCTCAGGTCATCT TGGATGCGTACCAGAGGGGGCGGGAGGCTGGGAACAAGCCTAGAGCTGTC GTGCAGGTGCGGGGGGGAATGCTTCATGCCATGGATGCGACGGAGGTTCG GTAGGAATACTGCAACAGTGCTGGGTGTCGTTTGTAGTTGGCTTGTTGCA TCAGGGTCTACAGCAGTAGCTCCGAAGTCGATCATCAATGATGTCGAGAC GATTCCATGCGGGACGAAACAACCGTTCCGGTGCTTTTGGCTGTCTACTG CAGCAACAGTGAACAACATGATGACTGAACGTCGACGCTCGATGCCTTTA ATGGCGGACGAGAGGTTGTTTAGGCCTGGGTGACGTCTATTGACGTCTAT TTCCGTTGCCAGCCGATGCGGACGCTGCGATCAACTACACACCGATTGAC AAATCATTTCGCCCGTACCCTTGAGCTGCTGCGCAAACGACAAGCACGCG TCACCGAGCCTTCCTCACCTGCCTAACGGGACCTCAGCTGCATTGCCTGA TTCACCCGACCTCGCCTCACCTCGCTTCCGCCGGTGGCGCCATGCTGCAC CTCACGCCCCAACCCGTGACAAACGCTGTACAACACTGCTGTACGACACA GCTGGCAGAGCCGTTCGACGGGATGGATCGGGGAGAGCTTTTGACGCCCC TGCTTGCGCAGCACCTGCAGAAGAAGTTTAACGTAGTGGCCGTTTCGCAG TGCGGCCGGAGCTCGGGGCCAAAGTACGGGCAGAACCTGCTGGACATAGC CACGGGCATGACGTCGCTCAGCACTCCTTTCGTCCACTCCAACGCGGTGG GTGGCGGTGGTCTGCTTTGCTTTGCCTTGCTTTGGTCTGCTCTGCTCCCT CATCGGCAACGTCGCCCCCTCTCGCCTCTGGTAGATTATTTTGGTGGATG TTTGACGTTGCGTCTTTTACCTTTTACAGCAGTATACTAGATACCTCTGT GGCAGATGCTTGCATTTTGTTTTTATGCTTGTCTCGGAGCTTGCGTTCAA ATCTCTTGCCATGAAGTTTTTGGAGTGCCGTTTTCTAGAGAAACCTCAAG AATTCACCTTGAAGCCCGCCATGAACTTGAAGGTTAGTTTTTGATGACCT TGCACACTGCAGTGAGTATCGTCTATAGAGATACTTCGTATATAATTTAC CCCCAAACAAAAAAATACTATGTATTAATGCATAAAAAATACAAACACAC CAATTTTCCGTTTTCCTACCTATTGTTTTGTCCTTGACATGATCAACGCA GGACCTGGAGCGGGACGTGGAGGTCGGGATGGGAGGTATTGACCCACCGG AATTCGGGTGGTATGTGGACCAGCAGGAGATCAGCTTGGAGCTTGACGCG TGGGTTGACCTGAGGAGAAATATCATCAAGCGCCCCTTTTTGGCGACGTC GGAAAAGTTCATTAACTCTTGCGGGTAAGGGAAGGAAATACACGAGAAAA AAAAAAATGCGGCGGAATTTCAAAACAGGCACGACCGAAGATCCTTGTAC GCGGCTTGCGTGCATGAAGCTTTTGCACTGCGGGGTGGCCTCTCTCTCCT TGACAAAGTCCTCCGGCAGGGCGCCCTTGGGTACGAGCCTCAGAGTGTCC CAGATGTTGGCATTCGACACGACTGACCTAGACTGACCTATCGCATCCAA GCAAGAGAGATAATAAAACGGCCCGACGAACGCAAAGGTTGAGAGGAAGT GGGTGGGGCGGGGCGGGGCGGGGCGACTACTGACGCCCCGTGACGGCAAA ACCGCCGGCAGACTTTGCATGTCGTACGTTGAAAGCCTTGGACGATTGCG CTCAACACGGGGGCCGCACAGGGAGGAAAGAGGGCGTTGCCTCTTCGATC ACTATTCCTCTCACAGTAGTAGGGGAGAGCAACAACAGCGTAATACAAAG GGTTGGTTCATAAAGGCTCGAAATGTTGTTGTTTTTGTTGCTGCTGGTTT ACTTCTACACAGCAATCGTCGAACGTGCTTCTCGCGTGAGGGCGGGTCAA TACTGATCGGCGTTCCCCTTCCATGCTCCCTATTCCCCGTGAACTACGGG AGGGTATGGTCTACCTCTTTGTTTTGCTCAGCGCCTGGGTGATTCTTTCG CAAAATGAGACGCGGGAGGGAAGGGAACCTTAACCTTCGCCCTGCCAGTT TAGGGTTAGCCTTGCGGCTGTGCTTTCAGTATTTGGCTGCTCTCGTTGGG TCTCATCCAAGGCGCGCGCATCATCGGACGTTGCATGTACGATACGACAT TGCGTGGCACAACTTTATACTTCGTATTGGTTGGTGGTTCCAAGGCCCCT TTCGCACCCCAGCACCCGGGGCTTTTTATAGGAGGCTGCACTTAGCTTTT GGTAAATGGGTAGCAGTACAGTATGTTTTTGTCACCCCCCACCGGACCAC CTGCAAACACCGTCCATGTGGCCTTCTGACTACCCAAATGCCCGAACATG TTGCGTCGTGGGCATTTGCCCCCCATGCCTCGACCCCACCAACACAACAC GCAACCAGTGCCTCTGTCTTAGTAGCGAGCGCGTTCCACCCTTCGTACGC GGAGAAGATGATGACCTGTGCGGAGACAGCCACGGACTTGAAGGGGTGCA TGATCGTCAGAAAAGGGCTCGAGGGTGAGACACGCAAGACAAGACACGCA AGACCGTATGTATATACTTGGAAGTAGAACGGCTACCCTTTGAGCTCATC CGACTGCGGCTTCTGTTGCGCACATGCGCGTCGGTTGCAACGTGGTTATC AGGCTTGAGCGTCGTTACTTGAATACTTATAGATAGGACGGGTGGCTTGA GCGCTCGAGTGGCGGTTTTGTGGTTTGTGGGCGGTATGGTAGTGACACCG ATCGTAGCGTACGTGGCAGGGGGCGGAAAGTTTTGCTACAATGCTGGGGG TGCGTGTGCAAGGATGCTTTGGGGTTTGAAAATTGTGAGAACGATCGAAC GATGTCATCTTCTGTTCCAGGTTCTTTCGGTAGGGTGACGTCATCACCCT GCCCCGTTGGATAATTTCAAAATTTCCATTTCCTTTTTTGTTTGTGAGGG CTTGCCTTACCATTCCATTCGATTCTCAGCACGTATACACCGCCCACAGA CGCGACATGTCCTGCGACATGCTTACTTCTATGAACGAGGGCCCCGTATA CAAGTATCCTTTCAACTGACCCTTGAACTCCTGTTGCTTCGTGTAGCGCG CGCGCGCGATCGCGATAAAAAAACAGCCAGGTCGTGTCATTGTCGCCTCA CCGCTGCTAACCCAGCAGCAGATGTTACTTGCCACGGAATCGTTGGGCCG CTTGGATGTATGCCCTCCTTGTGCCCTTTGAGTCCGATCTGATGGCTCGA AGACAATTGTCGCAGTTGCGATGGTGTCTGTTATGTCGGGGGCGACTGCA TTTTGGGGCAGCGCGGCGACGGAATATTCCAAACACTTGTGGAGCTCAAT TGACGAGGCTCGAACAATATTGGTTCCAATCGAATAACAGGGTCGCTGGG CTTTGGCTTAGGGCGCGAGGCAGAGATCGTTTGTGGCGTGCGGAAAGCCG ACAACTCTTTCGAAACTATGTCCTACACCTTTGGGGCAAAGGACATGGGG TGGGAGAAGGAGGTGAGTGCTTGTTTTTTGCTCTGCGACTGTTTTCTCTT TGTTTTTTGCTCTCGCAAGTGTGATCTTTTGTCTCTCCTCCCCTCTCGTA TTTTTTCGTGCGGCGGAAGGTTGGAATATCTTTGCGACCCATACATCGCC GAATGCAAGCTGCGGCAGGTGCCGTGGAAACTCAACAACTGAGAAGTACT TCTGAGCATAGCCACCAATGTTGCACAGCGCGCGTGGAACTGATCTGGGG CTGCCGTGTGCAAAGCTCGTGCGTGTATCGGAACCTCATTTTCGACGCGA TCCACCCGGCCGTGCGATAGACGTAAAGATATCTACCACATCCAAGATAT CACGTTGTACCTGGTAGCTGAGGTCACGCATGAGTCTATATCGAGTATTC CAGCGCGCACGCAGATCCAGATCCCCTGCCGTGCTTTCGAGGTTACTTGG TTTTCATACCTCGCTGGTCCTGTACCTTGCGGGCATGTGTTATTGTTTTA AGCTGCCCAAACGCTCCGGAGCTTGCACTGAAGGCTTTGTTTTTTCGATA TATGGGTCGACTGAGGCTTCGATATGGGCCGACGCCAAACGGGCTGACGT GACTTGACTTGACTGATTTGGTCTTTTACGGGTTACTCGACACCTTAGTC GATTTACCCTTGTTATTAGTACACCTCCGCGTCGCGCGATCTATGATAGA AAGTGCTATTACTCCGACACCGCTCAGCAAGGAAGCTGCAGCAGAGCTCT CATGCCGCATGCCGCTTCCTGTTGCTCTGTCATCTCTTCTGTCGCCCACC CCCTTTGGCTGCCTTGCACTCTTTCAATCTCAAATCTAGAGCGATCAAAT GGGGGCAAAAGACGCCAAGGAGACGACGGGAAACATCAAGTCCTTCTCGC TGGAAGGCTCTTCAGGGGACGAATACTTCGACAAGCGGCAAGTGCCAAAC CAGCCAAGCAGGTTGTTAGTCATGTCATGTCATGTCATGTCACGTCATGT ACACTGATGCCCTCTGCTCGGCTTGTTGACAGCCAGCCACTCTGTCTCGG GTTTACAACCATTCACGTCGCTCGATTGGCCGACAGCTTGTCTTCACGGT GGCTACCCGCAACCTGGCAGAAAACGTACCTGAACGATAAAGACCCTGGC TTTTGGTTCTGTTCTGGAAAGTCAGAATTGAATTTTCGTTTTTTGCATGC CGGGAACTACTGGCACGCCTCTGCCCTGTGCTTCGAGTAGACGCGCGCCC CACAGGCTGCGCTTCTCCTCGTCTAGTTGGTGCTTCTTTTCTCTTCTTTT CTTTCTCTGTCTTGGTTTCTCTGGGTTGTTTCGATGGCGATGGCGTCGCT CGAAACGATGCATGTCGGGTTGAATGGGGGGGCGCGATGAAAGTGCGGTC CTCTCGCCGAGGCTTGGTGACCTCTTCTTTTTCTCCCTCTTGCTTCTGTT GTCAGGGGATGGGTGTGCTGTTGGCACTCTTTGGAAAGGTTTGTGGAAGG CATCAAATGCGAATCGTAGGTATCACCACGCCGAAACGGAAACATAACGG TCGGAATGCGAGAGAAGAAACGTCCTCAGCTTCGCGACTCTACTTTGTTT GGTTCCAAGCTACCACACTCCATCATGCCTTTTGGGCCACTAGCGCCCCA ACGACATCGAGGTGCAATATCGACATCCATCACCTATGTTCACGTGTAGT TCGCCCCACCCTGCTGTTGTCCACTTTTCCAGGGTGAAACTCTCAAGTTC AGGGCTGGAAGTCGGCATGGAGTGGATCATGGCAAGACTTTAAAAAGTTG TTGCAGTACACGCACATTGCCTTCACTGGACTCATGTGTCAAACACGTAT CTTGTTGAGCACGAGAGCCAAGACATTGTGCATGGATGTGAGTGACAGCA AAATTTTGATGACGGTGTGCCTTTGGATGCCCCCAAAACACAACTTGGGA GAGGCGGG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig90:367615..376322+

>mRNA_C-linearis_contig90.16774.1 ID=mRNA_C-linearis_contig90.16774.1|Name=mRNA_C-linearis_contig90.16774.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3126bp|location=Sequence derived from alignment at C-linearis_contig90:367615..376322+ (Chordaria linearis ClinC8C monoicous)
ATGAGGGGCCGACACGCTGTACTCGCTGAGCTGTTGGCGCTCTTGGTAGT
CGCGAGCGGGTTCGTGCCTCCTTTCCTCGCCCGCCCCTTGCGCACGGCAG
CAACAACGACACCAGCAAGGCATGCCCCCGTCCCCAGATGAGGGGCCGAC
ACGCTGTACTCGCTGAGCTGTTGGCGCTCTTGGTAGTCGCGAGCGGGTTC
GTGCCTCCTTTCCTCGCCCGCCCCTTGCGCACGGCAGCAACAACGACACC
AGCAAGGCATGCCCCCGTCCCCAGCTCATCGCTCCAGATGGTGTCGGCGA
GTTCGCAAACCATGGATGCCCTGAAGGAAGGCATCAAAGCTGTCGCGGTC
GGCGTGAGCGGTAGCAAGCCCATCCCGGAGGATCTAGTCCCACCGCTCAT
CCAGCTCATCGCTCCAGATGGTGTCGGCGAGTTCGCAAACCATGGATGCC
CTGAAGGAAGGCATCAAAGCTGTCGCGGTCGGCGTGAGCGGTAGCAAGCC
CATCCCGGAGGATCTAGTCCCACCGCTCATCCAGGCGATGGGCAAGCTAG
ACAGGGCAAACGCCGACGTGGAGGCCGTGGAGCGTCTCGCTTCCTTCCTC
GGGACGCTGTTTGTTAAGCACGAAATCACCGAAACGGACGAGAAGGTGCT
AGCAGCAGCGGCCAAGAGAAGGCCCAAACTTAAGGGCGATGGGCAAGCTA
GACAGGGCAAACGCCGACGTGGAGGCCGTGGAGCGTCTCGCTTCCTTCCT
CGGGACGCTGTTTGTTAAGCACGAAATCACCGAAACGGACGAGAAGGTGC
TAGCAGCAGCGGCCAAGAGAAGGCCCAAACTTAAGGACGTGGGGGCTGTT
AGGGCCGGCTGCAGCGCCGGTCAGGTGCTCTCCTTGGCCGGGGGCGACAA
GGCCAGCGCCGACACACAGGAGCTGGCTCTCAAGCTGCTGGGGGGAGAGA
CTCTGGACGATGAGGATGCATACCGGTTAGGGAAGCGTATCTTCGATGGG
CAGCAGCCGTCGACTGTGCTATGACGTGGGGGCTGTTAGGGCCGGCTGCA
GCGCCGGTCAGGTGCTCTCCTTGGCCGGGGGCGACAAGGCCAGCGCCGAC
ACACAGGAGCTGGCTCTCAAGCTGCTGGGGGGAGAGACTCTGGACGATGA
GGATGCATACCGGTTAGGGAAGCGTATCTTCGATGGGCAGCAGCCGTCGA
CTGTGCTATGCCTTTGCGTGCAGATTTTGCGCGTGAGATACGAGACCCCC
AGCGAGTGGCGCGGCCTCATCAAGGCGCAGCAGGAGACGTTGAGGGTCGA
GAACTTCAACCCTCAGGTCATCTTGGATGCGTACCAGAGGGGGCGGGAGG
CTGGGAACAAGCCTAGAGCTGTCGTGCAGCCTTTGCGTGCAGATTTTGCG
CGTGAGATACGAGACCCCCAGCGAGTGGCGCGGCCTCATCAAGGCGCAGC
AGGAGACGTTGAGGGTCGAGAACTTCAACCCTCAGGTCATCTTGGATGCG
TACCAGAGGGGGCGGGAGGCTGGGAACAAGCCTAGAGCTGTCGTGCAGCT
GGCAGAGCCGTTCGACGGGATGGATCGGGGAGAGCTTTTGACGCCCCTGC
TTGCGCAGCACCTGCAGAAGAAGTTTAACGTAGTGGCCGTTTCGCAGTGC
GGCCGGAGCTCGGGGCCAAAGTACGGGCAGAACCTGCTGGACATAGCCAC
GGGCATGACGTCGCTCAGCACTCCTTTCGTCCACTCCAACGCGCTGGCAG
AGCCGTTCGACGGGATGGATCGGGGAGAGCTTTTGACGCCCCTGCTTGCG
CAGCACCTGCAGAAGAAGTTTAACGTAGTGGCCGTTTCGCAGTGCGGCCG
GAGCTCGGGGCCAAAGTACGGGCAGAACCTGCTGGACATAGCCACGGGCA
TGACGTCGCTCAGCACTCCTTTCGTCCACTCCAACGCGGACCTGGAGCGG
GACGTGGAGGTCGGGATGGGAGGTATTGACCCACCGGAATTCGGGTGGTA
TGTGGACCAGCAGGAGATCAGCTTGGAGCTTGACGCGTGGGTTGACCTGA
GGAGAAATATCATCAAGCGCCCCTTTTTGGCGACGTCGGAAAAGTTCATT
AACTCTTGCGGGACCTGGAGCGGGACGTGGAGGTCGGGATGGGAGGTATT
GACCCACCGGAATTCGGGTGGTATGTGGACCAGCAGGAGATCAGCTTGGA
GCTTGACGCGTGGGTTGACCTGAGGAGAAATATCATCAAGCGCCCCTTTT
TGGCGACGTCGGAAAAGTTCATTAACTCTTGCGGTGCCTCTGTCTTAGTA
GCGAGCGCGTTCCACCCTTCGTACGCGGAGAAGATGATGACCTGTGCGGA
GACAGCCACGGACTTGAAGGGGTGCATGATCGTCAGAAAAGGGCTCGAGG
TGCCTCTGTCTTAGTAGCGAGCGCGTTCCACCCTTCGTACGCGGAGAAGA
TGATGACCTGTGCGGAGACAGCCACGGACTTGAAGGGGTGCATGATCGTC
AGAAAAGGGCTCGAGGGGTCGCTGGGCTTTGGCTTAGGGCGCGAGGCAGA
GATCGTTTGTGGCGTGCGGAAAGCCGACAACTCTTTCGAAACTATGTCCT
ACACCTTTGGGGCAAAGGACATGGGGTGGGAGAAGGAGGGTCGCTGGGCT
TTGGCTTAGGGCGCGAGGCAGAGATCGTTTGTGGCGTGCGGAAAGCCGAC
AACTCTTTCGAAACTATGTCCTACACCTTTGGGGCAAAGGACATGGGGTG
GGAGAAGGAGAGCGATCAAATGGGGGCAAAAGACGCCAAGGAGACGACGG
GAAACATCAAGTCCTTCTCGCTGGAAGGCTCTTCAGGGGACGAATACTTC
GACAAGCGGCAAGTGCCAAACCAGCCAAGCAGAGCGATCAAATGGGGGCA
AAAGACGCCAAGGAGACGACGGGAAACATCAAGTCCTTCTCGCTGGAAGG
CTCTTCAGGGGACGAATACTTCGACAAGCGGCAAGTGCCAAACCAGCCAA
GCAGGGTGAAACTCTCAAGTTCAGGGCTGGAAGTCGGCATGGAGTGGATC
ATGGCAAGACTTTAAGGTGAAACTCTCAAGTTCAGGGCTGGAAGTCGGCA
TGGAGTGGATCATGGCAAGACTTTAA
back to top