mRNA_C-linearis_contig90.16760.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: D7FTC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC5_ECTSI) HSP 1 Score: 335 bits (860), Expect = 3.480e-96 Identity = 220/568 (38.73%), Postives = 284/568 (50.00%), Query Frame = 3
Query: 603 SDVIVRPSFKRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRA-SHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSEFELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGV----GVDNSLSALLCG-------------------------------------DXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVANFEERSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIE 2180
++ +VRPS KR RLG SLATG+ GT+EN +L DFFGCMGFLPLTC+STVR+AMV++LFS + + + SSST H S ++ EE EG + + +TA SP+ + Q SDPST MFWCAVALG LTQG+P+ ++APYIRLAE++L G+ + A S+ ARAWTLM YLYGFCGDS KFR C+ +AER F DG T + + +DA T++ + FVMQSY RFGQAFF DV GD A + +I+P D+ + GV + LS LLCG D + ++ +H++ VL G A+TPP H S NMQ+ M A+PEYERL+ AVD P+VRGGIGG+M+N LHISHLLI+ A +E+R LYT +M YNPMRP GS+ IPP EEW+GI CSHVYCR ++
Sbjct: 24 AEALVRPSLKRGRLGMSLATGLVGTQENAFLGDFFGCMGFLPLTCQSTVREAMVRILFSSDNDN---NKGFSSSTGHTWPHPVAPASAM---MAMDEEKFCYGGGEGDMS------IVSTARSPVSSMKQWEQQQQLSP-----SDPSTSMFWCAVALGALTQGRPVRSVAPYIRLAEAALVGNEEGA-FSDAARAWTLMGYLYGFCGDSAKFRNCQEQAERCFH----------------------------DGRTEG--------EDTSEEEAADATTASRLSQFVMQSYHRFGQAFFADVSATGDGDEASTALERAADASIEPAGF-ADAGPSAGGVLHCSSRSDELSELLCGGXXXXXXXEGDALLNIVHDFCANMSSANDASSAPAVVDSDVSASRGTYGRSLEERVHQKGEFVLVGSEAMTPPKHTSQNMQKVMMAALPEYERLEGAVDMPEVRGGIGGLMLN--------------------------------------WLHISHLLIIMTATYEDRDLYTALMVAYNPMRPEGSRRIPPFEEWEGIGNLCSHVYCRYLQ 498
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 230 bits (586), Expect = 4.150e-60 Identity = 180/638 (28.21%), Postives = 269/638 (42.16%), Query Frame = 3
Query: 294 PTIRKSCDFCNGRKKRCDGDGIRTCSYCIAKNNPDCIYSPRRPQKPRARKQPAPGPPTAKPPSPAAREQGSETXXXXXXXXXXXXXXXXXXXXXXXXXPAAPYSDVIVRPSFKRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSE--FELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGVGVDNS----LSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVANFEE---RSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIE 2180
P +R+SC C +KKRCDG + C C+ C Y RR + +Q + Q P KR RL AS ATG+ G +EN +L+DFFGC+GF+PLT S +R+ MV+++ ASP+ L ++ + S E G++V+ W + + PM D STC FWCA+ALG L +G P+E++A Y LA +L ++T + VA AW ++AY+YGF GD +F+E +E + + + F ++ + G T + Y+ P+++D A ++ +V S++ F QAF A +S + D+ EG G + SA L G+ +G +RNLLV +E L+ AVD P +RGGIG ++IN T V KAA+GD ++ERI RCVE E YPG+ R + H +H+++V +A + R++Y R+ YN RP S+P+PP EEWQG+ C YCRA+E
Sbjct: 27 PGMRRSCTECGRKKKRCDGQ--QPCRRCVGSGG-QCAYIMRRWHLLKPHQQ---------------QHQSQRPDRDGAHGREVLQSAQPGALVTCGMLP------------LKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIM---ASPAPLQQSAIGGACS--------------------EVGTMVRAPCW------NEASERNQLPM--------------------DASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKGFVNTLPLGFAEVVLPVKIPNASCGQWETKSLDAEEYVP-----PQVADVAAEGELYKYVAHSFKAFEQAF---------QQKAYMQSA-----------RDVDTPGEAEGHGESDRNRWPASAFLPGEISEAMGTVFG---------DRNLLV---------------------------FEPLEEAVDRPSIRGGIGSLLINGTLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAME 524
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.660e-56 Identity = 184/645 (28.53%), Postives = 277/645 (42.95%), Query Frame = 3
Query: 300 IRKSCDFCNGRKKRCDGDGIRTCSYCIAKNNPDCIYSPRRPQKPRARKQPAPGP--PTAKPPSPAAREQGSETXXXXXXXXXXXXXXXXXXXXXXXXXPAAPYSDVIVRPSFKRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSL---AGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSAD--RSEFELLIQHADGLDLFYGD-GCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGVGVDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPM-GLHISHLLIVFVANFEE---RSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIENRFRKQ 2198
+R+SC C +K++CDG + CS C+ ++ C YS R+P +P+ + Q P P P + R S A S ++ KR RL AS ATG+ G +EN +L+DFFGC+GFLPLT S +R MV+++ +P L ++ S + +I+ +G T+GS ++ + PS C FWCAV +G L G P+E + Y LA +L G V+ + VA+AW ++ Y YGF GD+ F+E ++ S E S D + F +I+H + ++ G+ + + +DP P+ + AAT D+ +V QS+ F Q F V N I+P + D +G CG G Q +E+ S M + D + ++E LQ AVD ++R GIGG++IN + KA +GD G++ER+ CVE ERYPG+ R M H+SH ++ +A + R LY R+ N+YNP R S P PPLEEW+G++ C CR E Q
Sbjct: 18 MRRSCCECGRKKRKCDG--MAPCSRCL-RSGVQCTYSKRKPHQPQTQHQHQRRPRGPACMPSTELLRHSSSG---------------------------ALQASGML---PLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFD--------------------AILTEDGI---TTGSQLS--------------------------TGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVN----AEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDP---PQANPAATELDVFRYVTQSHTAFEQLVFEKVCEN--------------SATIRP--LSDDEPCEDDGG----------CGSPH-------GNPPQAEEV--------------------SDAMVTGLRDGLIDFEHLQEAVDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQ 520
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 219 bits (559), Expect = 2.100e-56 Identity = 160/526 (30.42%), Postives = 238/526 (45.25%), Query Frame = 3
Query: 630 KRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSL---AGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADR--SEFELLIQHADGLDLFYG--DGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGVG--VDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMG-LHISHLLIVFVANFEE---RSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYC 2168
KR++L AS ATG+ G +EN +L+DFFGC+GF+P T +S +R AMV+++ + ST+ A H + S+ G ++ E+ G T G+ + ++ PS C FWCAV +G L +G P+E++A Y RLA ++ G VD ++VA AW ++ Y YGF GD+ F E + ++ + S E+ S S F ++ + + + +F G D T S R QD P+++ AAT D+ FV QS F Q + G + S G Y E A+ G V+ A++ G + + ++E LQ AVD P+VR G+GG +IN V +AA GD G +E+I CVE LERYPG+ RF +G H+ H + +A ++ R LY R+ YN RP S P PPLE WQG++ C H +C
Sbjct: 97 KRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMM----------ARSTAQHQPGARHNSPEQSQFGDTFT--ED-----------GITPGNQL--------------------------LTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVD----ADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNVDAVDTGSFTRH--QD---RPQINPAATEEDVFRFVAQSVEAFVQLVVEEACGKRATRSCSSDDG---------PYEEDRGDASPHGNAPRVEEISDAMVTG----------------------------------------------FKIGLLDFENLQEAVDLPNVRTGMGGFLINMNLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHC 509
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 215 bits (547), Expect = 4.600e-56 Identity = 157/510 (30.78%), Postives = 227/510 (44.51%), Query Frame = 3
Query: 678 KENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSE--FELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVL--GDNAKSRS-GVVDGINIKPE-YMETDSAAAVEGVGVDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVA---NFEERSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIE 2180
+EN +L+DFFGC GFLPL S +R+ MVK++ AS S+ D GG + G + K +A PM DPS C FWCAVALG L +G PIE++ Y RLA+++LA + + VA+AW ++A L+GF GD E F + ++ S EE S D F +++ + F C +Q+ P P++S AT ++ +V QS R F +A +T GD S S G DG+ P+ +M D + N++ LL N +H +E L+ AVD P +RGGIG ++IN V KAA+GD ++ERI RC+E LERYPGL R +G H++H++++ + + R++Y R+ +N RP G P+PP EEW G+ C H CRAIE
Sbjct: 2 QENAFLSDFFGCNGFLPLATPSHIRETMVKIMLPPAS-------------SQQPVLGDDCDEGGHYFEAVARGGDLSKT------------SAGNRLPM--------------------DPSACTFWCAVALGALAKGSPIESVTSYARLAQAALANSNSDPADTEVAKAWVILANLHGFMGDMEGFEKYLALSDSFVTSSIEEGSTDALPVGFAEIVKFKE----FANASCGEWPLECFSVQENNPPPQLSVVATEAELYQYVAQSCRAFERAVYTTATEQSARGGDMCDSESHGRPDGVRPSPQDFMAGD---------LSNAMGVLL-----------------------ENGSCIH-------------------------FEPLEEAVDRPSIRGGIGALLINGILVFEKAAKGDLRATLERIGRCIEVLERYPGLCRCMIGCHMTHMMLICLVAAGDSSARAMYDRVRGAFNSHRPSGYLPVPPFEEWCGVDAFCDHRCCRAIE 405
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE) HSP 1 Score: 217 bits (552), Expect = 5.450e-56 Identity = 161/534 (30.15%), Postives = 230/534 (43.07%), Query Frame = 3
Query: 624 SFKRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSE--FELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPE---YMETDSAAAVEGVGVDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVANF---EERSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIENRFRKQQ 2201
+ KR RL AS ATG+ G +EN +L FF +GFLPLT + VR+ MV L+ S +A+ EE+ + +E V +TS P TC FWCAVA+G L +G PIE+ Y R A+ ++A T VA+AWT++AYL+GF GD E F E ++ S E S D F +++H + + LF G V S + P + AT +C ++MQ Y R + L PE Y+ D A E D + GD G + H R L+ ++ ++ P L+ AV+ PD+R G+GG++IN T K GD G++ER+ RCVE E +PGL RF MG H++H+++ A+ + LY R+ N N RP GS PPLEEWQGI+ C +V CR+IE F +++
Sbjct: 45 AIKRFRLSASPATGLVGMQENSFLTSFFSSVGFLPLTTRRDVRETMVTLMMSATRQQSIATEDCDV----------------------EENSHALVLENKVCNTS----------------------------EGDDFPKTCTFWCAVAIGALAKGHPIESTNIYFRRAKEAMAR-YSGPTNFEVAKAWTILAYLHGFIGDMETFHEYLALSDSFVHDSAERGSRDSLPVGFPEVVKHGETIKLF--TGTAEEEEVESLLAQEVSFPGECEVATEAHICRYIMQ-YHRAIEISIQQALRT-------------------PEDTPYVGADDAQYTE----DGAAKGSKAGDRVG------GICSLSRNPHSRELIC---------------DVVEGIQLQFPGLAHLEDAVERPDIRPGVGGLIINGTLFFNKTVSGDNKGALERLERCVEVFEGFPGLTRFAMGNHMAHVMLSVAASVGDSRDGGLYNRLRNACNLTRPQGSLAFPPLEEWQGISAFCDNVPCRSIEALFARRK 480
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI) HSP 1 Score: 213 bits (542), Expect = 9.060e-56 Identity = 147/506 (29.05%), Postives = 226/506 (44.66%), Query Frame = 3
Query: 678 KENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSE--FELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGVGVDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVA---NFEERSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIE 2180
+EN +L DFF C+GF+PLT +S +R+ MVK++ S P+L K W ++A M + + STC FWCAVALG L +G P+ ++A Y LA ++ T + VA+AW ++A+LY F GD++ F+E R+E F S S + + ++ H + +F G+ T S V S+ + P P++ AA+ ++ F+MQ+YR F QA + + Y+E+ A G+ +N C + E ++ V+ M + + ++ERL+ D P +R GIGG++IN T V KAA+GD G+VERI RCVE E +PG+ RF MG H++H+++ +A + R +Y R+ YN R S PIPP EEWQG++ C YCR +E
Sbjct: 2 RENTFLGDFFACVGFVPLTTQSHIRETMVKMMVS---PTL-----------------------------------SQKPVFWRDCDEDDVLAREGDFRMPSAENQLD-----------AGSSTCTFWCAVALGALVKGGPVTSVARYSELARDAVESYSGPVT-TGVAKAWVILAFLYLFHGDTDMFQEYMARSEAFFSASGAYGSTEVLPVGYAEVVSHRMTVRMFSGNAST--SEVESFCRQPQDPPQLKAAASETELYAFMMQAYREFEQAVY------------------------RTAYLESSDAG---GLPSENEAGIRTC----------------SSRVREASMAVVD-------------TMASRISNHSCDFERLEDVADRPLIRQGIGGLIINGTLVFEKAAKGDFTGAVERIDRCVEVFEGFPGVCRFFMGSHVAHIMMTALAVIGDSRARGMYDRLRRAYNSTRLPDSTPIPPFEEWQGVSSFCDTFYCRTME 399
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.000e-54 Identity = 161/525 (30.67%), Postives = 234/525 (44.57%), Query Frame = 3
Query: 630 KRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSEFELLIQHADG-LDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGVGVDNSL----SALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVANFEE---RSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIE 2180
KR RL AS ATG+ G +EN +L+DFFGC+GF+PLT S +R+ MVK++ ASP+ L ++ G + G GS+V+ W + P L DPSTC FWCA+ALG L +G P+E++A Y LA +L ++ + VA AW ++AY+YGF GD KF+E +E FL S +A R L + A+ L + + +S + P+++D A ++ ++ QS++ F QAF K + ++ EG G + SALL G+ +G +RNLLV +E L+ AVD T V KAA+GD ++ERI RCVE E YPG+ R + H +H+++V +A + R++Y R+ YN RP GS P+PPLEEWQG+ C YCRA+E
Sbjct: 5 KRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIM---ASPAPLQQSAI-------------------GGAFGGV-GSMVRARCW---------NKASEKPQLPM-----------------DPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSES-FLKS---ATAKRCTDTLPLGFAEVVLPVKIPNASCGQWETKSLDAEERVPPQLADVAAEGELYKYIAQSFKAFEQAFQQKAY--------------------KQSARDVETPGETEGHGESDRNRRRPSALLPGEISEAMGTVFG---------DRNLLV---------------------------FEPLEEAVDR--------------TLVFEKAAKGDRRATLERIGRCVEVFELYPGMCRCTISHHKAHIMLVCLAAIGDSSARAMYDRLRGSYNSFRPAGSLPVPPLEEWQGVGAFCDDFYCRAME 406
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE) HSP 1 Score: 203 bits (516), Expect = 7.900e-51 Identity = 186/637 (29.20%), Postives = 255/637 (40.03%), Query Frame = 3
Query: 300 IRKSCDFCNGRKKRCDGDGIRTCSYCIAKNNPDCIYSPRR-PQKPRARKQPAPGPPTAKPPS---PAAREQGSETXXXXXXXXXXXXXXXXXXXXXXXXXPAAPYSDV----IVRPSFKRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSLAGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSADRSEFELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPE---YMETDSAAAVEGVGVDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPMGLHISHLLIVFVANFEERSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAI 2177
++KSCDFC R+KRCDG R CS+CI K P+C YS R P K + PT P S A R+ + V +V P FKR RL AS ATG+AG EN L DFFGC+GFL L +S +R AMV ++ RA+ L+ +T T E S V+ E A T + R D STC+ WCA+ALG L +G P+ ++ Y+ LA+ +LA +A + ++ARA MA+++ F GD A I +S P L+++A G + G + + +Y Q AP K+ + D+C V+ R Q D G + + S G +P Y E D A G VD L G LA P H T+ M++AMPE R + ++ G+G ++ L+A + A SV R V AL RYPGL R+ H H + +AN R Y + YNPMRP P PP EEW G++ C H YCR +
Sbjct: 100 LKKSCDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSLPSKSKT--------PTVVPTSGEEDAVRDDSPSPGLSLRARAEVDNDANADTGAQHTAKKKGSGTAVGVTGLVLP-FKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVM--RANNVLIQQGAT---TPARPXXXXXXXXXXXXXDTEETPVSSVRTE------EACWRNAVTTEDAALPR----------------DASTCILWCAIALGALVRGYPLPHVQRYVHLAKDTLASCSASAAL-DMARANLAMAFVHNFLGDQVNNHRYVELANSI--VSALPPVQVTLGVYDLLRYA-GKSWVFEVGLASKKDIDAYWQSVAPIWKLPEKVVEQDICGLVLAVDTRVDQLVLADAPGTPAAEGLQRSSDATAGAASRPSPLTYGEADDAEGKMGGFVDAPLPTK------------------------------EGGLA---PPH-PTDPFLGMKEAMPELLRANSFLSRAKMQSGLGSLLYYGNLCFLQALDNEIAASVGSFHRSVSALLRYPGLCRYNSLSHNVHTQLWGLANARRREQYEALRAAYNPMRPARLSPAPPFEEWTGMSDICDHPYCRNV 662
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.790e-50 Identity = 150/526 (28.52%), Postives = 233/526 (44.30%), Query Frame = 3
Query: 630 KRVRLGASLATGIAGTKENVYLADFFGCMGFLPLTCKSTVRDAMVKLLFSRASPSLLASTSTSSSTSRASHRYKDNSRGGGGWSLGEESGSIVKMEGWVGSTSGSIVAATATSPMLVTRHHHQXXXXXXXXSKMSDPSTCMFWCAVALGGLTQGQPIENMAPYIRLAESSL---AGDVDNATMSNVARAWTLMAYLYGFCGDSEKFRECRRRAERIFLLSDEEPSAD--RSEFELLIQHADGLDLFYGDGCTTASHVRSYIQDPAPHPKMSDAATSNDMCHFVMQSYRRFGQAFFTDVLGNVLGDNAKSRSGVVDGINIKPEYMETDSAAAVEGVGVDNSLSALLCGDXXXXXXXXWGAQGQQQELHERNLLVLHGDLALTPPAHGSTNMQRTMEDAMPEYERLQRAVDGPDVRGGIGGIMINCTSVVLKAAQGDTAGSVERISRCVEALERYPGLIRFPM-GLHISHLLIVFVANFEE---RSLYTRMMNIYNPMRPGGSQPIPPLEEWQGIAGSCSHVYCRAIE 2180
KR RL AS ATG+ G +EN +L+DFFGC+GFLPLT S +R MV+++ + S++ R Y +G + G+I +G T+G+ ++A PS C FWCAV +G L +G P+E++A Y RLA +L G V+ + VA AW ++ Y YGF GD+ F+E A+ S E S + + F +I+ + ++ G A+++ P+++ AA D+ + QS F + F + A +S + ++ + E + G A Q +++ + ++ L +D + ++E LQ VD ++R GIGG++IN KA +GD G++ER+ CVEA ERYPG+ R M H SH ++ +A + R LY R+ ++YNP RP P PPLEEW G + C CR E
Sbjct: 24 KRFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMM------------TLSTAPHRPDASYDSLDQG--------QFGAIFSEDGI---TTGNQLSA--------------------------GPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVN----AEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGH--LDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVF---------EKACEKSSIRRHLSDDEPWEEDRGGGSPHG------------------------AAPQAEDVSDAMVMGL--------------------QDGLIDFEHLQETVDRSNIRKGIGGLLINMYLAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFE 441 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig90.16760.1 >prot_C-linearis_contig90.16760.1 ID=prot_C-linearis_contig90.16760.1|Name=mRNA_C-linearis_contig90.16760.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=981bp MASKPPGAGGGRGDAGRGKKQANPKEKKSPTIRKSCDFCNGRKKRCDGDGback to top mRNA from alignment at C-linearis_contig90:130145..151159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig90.16760.1 ID=mRNA_C-linearis_contig90.16760.1|Name=mRNA_C-linearis_contig90.16760.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=21015bp|location=Sequence derived from alignment at C-linearis_contig90:130145..151159+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig90:130145..151159+ >mRNA_C-linearis_contig90.16760.1 ID=mRNA_C-linearis_contig90.16760.1|Name=mRNA_C-linearis_contig90.16760.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5886bp|location=Sequence derived from alignment at C-linearis_contig90:130145..151159+ (Chordaria linearis ClinC8C monoicous)back to top |