mRNA_C-linearis_contig90.16755.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: D8LR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR81_ECTSI) HSP 1 Score: 675 bits (1741), Expect = 1.520e-236 Identity = 332/443 (74.94%), Postives = 368/443 (83.07%), Query Frame = 1
Query: 67 MRSVAEIVEQSVKEWPDVPDETYWTLLSLPFLTLAACCVWLRVLWPCP--EASPKDFAPATLLDK-----KATESSSLQGTSTGAYSSIESGNGNGDTNG----FINGNSHNSAASIGTDSLSGSGSKPGSRVLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITLL 1362
MRS +EI+EQ+ EWP+VPDETYW L+SLPFLTL ACCVWLRV+WPCP + + KDF PATLL TE S+LQ S G Y S+E+G GN NG +GNS+ S S GT+ V+EAGEVAGDYS+DWK GTFDMTL+ VT+AWL VN+GLTLW++P+LF +AEFW LQ+PKLACM+ VS+ AGSLCRYFCPADD GYIMTSKNSWFKVNYTRKVQHFAAYLVPLLF PS DC C GTLELSWGVWVTLIGFLVMIKP+REA+P+FMLQFNGLDRPEDRP+TLEWIIKYNIWPGE+MIVFFAHLF S QRDLVYILVFVTGVGDGLAEPVGIWLGKHKYM RSCDA+ YYERS EGSCCVF+VTV MVF SFATFWQFLVA+LTLP+ALTL+EAFSPHTMDTPFIMGVGGAMLYAII LL
Sbjct: 1 MRSFSEILEQTTHEWPNVPDETYWALVSLPFLTLVACCVWLRVVWPCPTRDNNLKDFTPATLLGDAGGGGSVTERSALQDASNGGYYSVENGRGNSPGNGAGKGLPSGNSYTSTGSTGTNKS----------VIEAGEVAGDYSLDWK-GTFDMTLVQVTVAWLAVNIGLTLWIQPTLFQNAEFWVLQVPKLACMIAVSILAGSLCRYFCPADDTGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFRPSPDCHCTGTLELSWGVWVTLIGFLVMIKPIREAVPLFMLQFNGLDRPEDRPHTLEWIIKYNIWPGEIMIVFFAHLFRQSYQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMVRSCDADKYYERSFEGSCCVFIVTVATIIMVFTSFATFWQFLVALLTLPMALTLAEAFSPHTMDTPFIMGVGGAMLYAIIKLL 432
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A6H5J7Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y0_9PHAE) HSP 1 Score: 493 bits (1268), Expect = 5.200e-166 Identity = 250/370 (67.57%), Postives = 268/370 (72.43%), Query Frame = 1
Query: 493 MTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVN------------------------------------------------YTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPE--------------------------------DRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITLL 1362
MTL+LVT+AWL VN+GLTLW+ P+LF +A+FW LQ+PKLACM++VSV AGSLCRYFCPADD GYIMTSKNSWFKVN YTRKVQHFAAYLVPLLF PS DC C GTLELSWGVWVTLIGFLVMIKP+REAIP+FMLQFNGLDRPE DRP+TLEWIIKYNIWPGE+MIVFFAHLF S QRDLVYILVFVTGVGDGLAEPVGIWLGKHKYM RSCDA+ YYERS EGSCCVFVVTV MVF SFATFWQFLVA+LTLP+ALTL+EAFSPHTMDTPFIMGVGGAMLYAII LL
Sbjct: 1 MTLVLVTVAWLAVNIGLTLWIHPTLFQNAQFWVLQVPKLACMIVVSVLAGSLCRYFCPADDTGYIMTSKNSWFKVNGQTTAILRLFPYFVPVLDAPPSLVVLHFSLFSRLVIYFFLYFCWFQVNYTRKVQHFAAYLVPLLFRPSPDCYCTGTLELSWGVWVTLIGFLVMIKPIREAIPLFMLQFNGLDRPEGETATNTNTNNSAWISGPLATLPVGASSRCPQDRPHTLEWIIKYNIWPGEIMIVFFAHLFRQSYQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMVRSCDADKYYERSFEGSCCVFVVTVATIIMVFTSFATFWQFLVALLTLPMALTLAEAFSPHTMDTPFIMGVGGAMLYAIIKLL 370
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: D7G8M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M1_ECTSI) HSP 1 Score: 346 bits (888), Expect = 4.250e-111 Identity = 165/189 (87.30%), Postives = 175/189 (92.59%), Query Frame = 1
Query: 796 RGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITLL 1362
R + +LSWGVWVTLIGFLVMIKP+REAIP+FMLQFNGLDRPEDRP+TLEWIIKYNIWPGE+MIVFFAHLF S QRDLVYILVFVTGVGDGLAEPVGIWLGKHKYM RSCDA+ YYERS EGSCCVFVVTV MVF SFATFWQFLVA+LTLP+ALTL+EAFSPHTMDTPFIMGVGGAMLYAII LL
Sbjct: 47 RASEDLSWGVWVTLIGFLVMIKPIREAIPLFMLQFNGLDRPEDRPHTLEWIIKYNIWPGEIMIVFFAHLFLESNQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMVRSCDADKYYERSFEGSCCVFVVTVATIIMVFTSFATFWQFLVALLTLPMALTLAEAFSPHTMDTPFIMGVGGAMLYAIINLL 235
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: W4GWT5_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWT5_9STRA) HSP 1 Score: 328 bits (842), Expect = 4.170e-102 Identity = 166/310 (53.55%), Postives = 215/310 (69.35%), Query Frame = 1
Query: 433 LEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITLL 1362
+E GEVAGDY +W TFD + + +L V V LT P F FWW Q+PKLACM++VS+ G +CR FC D+KGYI+T+K+S FKVNYTRK+QHFAAY+VPL+ + G L L+WG + T+IGFLV+IKPVREA+ +FMLQFN LDRPEDRP+TL+WII NI PG L+++FF LFA +G DLVYI+VF+TGVGDGLAEPVGI GKHKY +C ++ Y RS EGS CVF+ +I + + F F Q LV++L LP + +EA +PHTMDTP +M G +L+ I + +
Sbjct: 80 IEEGEVAGDYEDNW-VNTFDFVFFIGMVLYLVVMVVLTYIYSPDYFSTPSFWWSQLPKLACMMVVSLIGGLICRAFCSVDNKGYIITNKSSAFKVNYTRKLQHFAAYMVPLVL----HTNFHGPLALAWGDFFTMIGFLVLIKPVREALSVFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLLILMFFKWLFAENG--DLVYIIVFITGVGDGLAEPVGIMWGKHKYKTTACFSSRAYTRSWEGSACVFLSGMIFPALQYADFDNFTQVLVSMLVLPPTMAYAEAIAPHTMDTPVLMIGCGVILWFITSFI 382
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A5D6Y2P1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2P1_9STRA) HSP 1 Score: 324 bits (830), Expect = 3.530e-100 Identity = 183/418 (43.78%), Postives = 238/418 (56.94%), Query Frame = 1
Query: 109 WPD-VPDETYWTLLSLPFLTLAACCVWLRVLWPCPEASPKDFAPATLLDKKATESSSLQGTST--GAYSSIESGNGNGDTNGFINGNSHNSAASIGTDSLSGSGSKPGSRVLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAII 1353
W D + YW L LP +L A LRVLW P++ PK P K+ ++ G G Y++ + GD N I AG+VAG Y W TFD LL A+ V LT +KP+L+ + FW +PKL M+ VS G +CR+FC DD GY++T ++S FKVNYTRK+Q AAYL+PLL P C C G LEL+WG +VTL+GFL +IKPVRE FMLQFN LDRPEDRP+TL+WI+ N++PG +++FF LFA + Q DLV+ILVFVT +GDGLAEPVGI GKHKY SC + Y RS EGS CVF+ ++ + + FA+ Q +L LP + +EA +PHTMD P +M G +LYA+I
Sbjct: 13 WSDHLRTSDYWLLAGLPLGSLLALLFVLRVLWR-PKSGPKFRLP-----KQVPTYGAIGGPDDHPGGYAAYD-----GDANDLI----------------------------YAGQVAGRYDTRWTR-TFDFVFLLGMAAFALTLVVLTSVLKPALWRNGTFWLFLLPKLVAMMAVSTLGGLVCRFFCIVDDAGYVITERSSAFKVNYTRKLQLLAAYLIPLLVKPDAACACNGALELAWGDFVTLLGFLALIKPVRERATFFMLQFNSLDRPEDRPHTLKWIVAGNVFPGLFVLLFFRWLFATTTQADLVFILVFVTAIGDGLAEPVGIAFGKHKYSTSSCFSRRKYTRSFEGSACVFLSGMVFPALQYADFASPTQLWATMLVLPFVVAYAEATAPHTMDAPVLMTSTGLVLYAVI 390
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A485K4N3_9STRA (Aste57867_62 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4N3_9STRA) HSP 1 Score: 322 bits (826), Expect = 1.420e-99 Identity = 161/309 (52.10%), Postives = 207/309 (66.99%), Query Frame = 1
Query: 424 SRVLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAI 1350
S + E GEVAGDY W + TFDM L+ +A+L V + LT + P F FW +Q+PKL CM+LVS+ G +CR FC D+KGYI+T+KNS FKVNYTRK+QHFAAY+VPL+ D G L L WG W T++GF ++IKP+RE FMLQFN LDRPEDRP+TL+WII NI PG +++FF LF G L +I++++TG+GDGLAEPVGI GKHKY C + Y RS EGS CVF+ +I + F F +F Q LVA+L LP + +EA +PHTMDTP +M G +L+AI
Sbjct: 89 SSLCEEGEVAGDYEESWTS-TFDMVFLIFMLAYLGVMLVLTYFYSPQYFSDINFWLMQLPKLGCMMLVSLLGGLVCRCFCNVDEKGYIITNKNSAFKVNYTRKLQHFAAYMVPLVV----KSDYHGPLALGWGDWFTMLGFFILIKPLRENFSFFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLFILLFFKWLFGEQGA--LTFIIIYITGIGDGLAEPVGIAWGKHKYKTAGCFSTRKYTRSWEGSACVFMSGMIFPALQFADFGSFTQVLVAMLVLPPTMAYAEATAPHTMDTPVLMIGCGVILWAI 390
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A6G0WU79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU79_9STRA) HSP 1 Score: 322 bits (824), Expect = 1.580e-99 Identity = 163/311 (52.41%), Postives = 213/311 (68.49%), Query Frame = 1
Query: 430 VLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITLL 1362
+ E G+VAGDY W TFD+T L+ + +L V V LT F + FW Q+PKL CM++VS+ G +CR FC DDKGYI+T+KNS FKVNYTRK+QHFAAY+VPL+ + G + L+WG + T+IGFLV+IKP+RE++ FMLQFN LDRPEDRP+TL+WII NI PG +++FF LFA +G DLVYI+VF+TG+GDGLAEPVGI GKHKY +C A+ Y RS EGS CVF+ +I + + F F Q LV++L LP + +EA +PHTMDTP +M G +L+ I T +
Sbjct: 73 LCEEGDVAGDYEESWTK-TFDLTFLIGMVVYLVVMVVLTYIYHIDYFTNTSFWLSQLPKLVCMMVVSLIGGLICRCFCTVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLVL----HTNFSGPIALAWGDFFTMIGFLVLIKPIRESLSFFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLFILMFFKWLFAENG--DLVYIIVFITGIGDGLAEPVGIMWGKHKYKTTACFASRAYTRSWEGSACVFLSGMIFPALQYADFDNFTQVLVSMLVLPPTMAYAEAIAPHTMDTPVLMIGCGIILWFICTFI 376
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A329T149_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T149_9STRA) HSP 1 Score: 322 bits (825), Expect = 3.210e-99 Identity = 161/315 (51.11%), Postives = 212/315 (67.30%), Query Frame = 1
Query: 415 KPGSRVLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITL 1359
+P + ++E GEVAGDY W GTFD L+ + V + LT +P H FW +Q+PKL M++VS+F G +CR FC D+KGYIMT+K+S FKVNYTRK+QHFAAY+VPL+ + G + L+WG T++GFLV+IKP+RE FMLQFN LDRPEDRPNTL+WII NI PG +++FF LFA G L +ILVF+TG+GDGLAEPVGI G+HKY RSC + Y RS EGS CVF+ ++ + + +F FWQ L+++L L + +EA +PHTMDTP +M G +LYAI+ L
Sbjct: 101 RPKTSLVEEGEVAGDYRKHWY-GTFDFAFLVGMAVYAGVMLVLTFIYEPQWLHETRFWMMQLPKLVVMMVVSLFGGIICRCFCDVDEKGYIMTNKSSKFKVNYTRKLQHFAAYMVPLVI----KSEYSGPIALAWGDLFTMMGFLVLIKPIREHSKFFMLQFNSLDRPEDRPNTLKWIILGNIAPGMFILMFFKWLFAAQGA--LTFILVFITGIGDGLAEPVGITWGRHKYKTRSCFSKNKYTRSWEGSACVFLSGLVFPALQYAAFDNFWQVLLSMLILAPTMAYAEATAPHTMDTPVLMIGCGVILYAIVNL 408
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A3M6VFZ5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFZ5_9STRA) HSP 1 Score: 321 bits (822), Expect = 3.550e-99 Identity = 160/310 (51.61%), Postives = 213/310 (68.71%), Query Frame = 1
Query: 430 VLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDTPFIMGVGGAMLYAIITL 1359
++E GEVAG+Y +W GTFD LL IA+ V + LT + +P + FW +Q+PKL M++VS+ G +CRYFC D+KGYIMT+K+S FKVNYTRK+QHFAAY+VPL+ D G + L+WG + T++GFLV+IKP+RE FMLQFN LDRPEDRPNTL+WI+ NI PG +++FF LF G L +ILVF+TG+GDGLAEPVGI G+HKY A SC + Y RS EGS CVF+ ++ + + +F FWQ L+++L L + +EA +PHTMDTP +M G +LYAI+ L
Sbjct: 77 LVEEGEVAGNYEKNWY-GTFDFAFLLGMIAYADVMLVLTYFYEPQWLLKSHFWLMQLPKLVVMMVVSLVGGIICRYFCDVDEKGYIMTNKSSKFKVNYTRKLQHFAAYMVPLVI----KSDYEGLIALAWGDFFTMLGFLVLIKPIRECSEFFMLQFNSLDRPEDRPNTLKWIVVGNIAPGMFILMFFKWLFGAQGA--LTFILVFITGIGDGLAEPVGITWGRHKYKAYSCFSKNKYIRSWEGSACVFMSGLVFPALQYAAFDNFWQVLLSMLILAPTMAYAEATAPHTMDTPVLMIGCGVILYAIVNL 379
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Match: A0A6A4XMZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XMZ5_9STRA) HSP 1 Score: 320 bits (819), Expect = 7.370e-99 Identity = 163/297 (54.88%), Postives = 206/297 (69.36%), Query Frame = 1
Query: 418 PGSRVLEAGEVAGDYSMDWKAGTFDMTLLLVTIAWLWVNVGLTLWVKPSLFHHAEFWWLQIPKLACMVLVSVFAGSLCRYFCPADDKGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSKDCDCRGTLELSWGVWVTLIGFLVMIKPVREAIPIFMLQFNGLDRPEDRPNTLEWIIKYNIWPGELMIVFFAHLFAPSGQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMARSCDANTYYERSLEGSCCVFVVTVIXXXMVFPSFATFWQFLVAVLTLPLALTLSEAFSPHTMDT 1308
P + GE AGDY DW TFD LL + +L V + LT + LF + EFW Q+PK+ACM+LVS+ G +CR+FC D KGYIMT+KNS FKVNYTRK+QHFAAY+VPL+ S +G L L+WG + T+IGFLV+IKPVRE++ FMLQFN LDRPEDRP+TL+WII NI PG +++FF LFA +G DLVYI+VF+TGVGDGLAEPVGI GKHKY +C + Y RS EGS CVF+ +I + + +F F Q LV++L LP + +EA +PHTMDT
Sbjct: 82 PQGDICHEGEAAGDYDDDW-THTFDYVFLLGMVGYLVVMLVLTYFFHADLFTNPEFWLSQLPKVACMMLVSLLGGLICRHFCRVDQKGYIMTNKNSAFKVNYTRKLQHFAAYMVPLVLHTS----FKGPLALAWGDFFTMIGFLVLIKPVRESLSFFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLFILMFFKWLFAENG--DLVYIIVFITGVGDGLAEPVGIMWGKHKYKTTACFSTRAYTRSWEGSACVFLSGMIFPALQYANFDNFTQVLVSMLVLPPTMAYAEAIAPHTMDT 371 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig90.16755.1 >prot_C-linearis_contig90.16755.1 ID=prot_C-linearis_contig90.16755.1|Name=mRNA_C-linearis_contig90.16755.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=433bp MRSVAEIVEQSVKEWPDVPDETYWTLLSLPFLTLAACCVWLRVLWPCPEAback to top mRNA from alignment at C-linearis_contig90:52501..60373+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig90.16755.1 ID=mRNA_C-linearis_contig90.16755.1|Name=mRNA_C-linearis_contig90.16755.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7873bp|location=Sequence derived from alignment at C-linearis_contig90:52501..60373+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig90:52501..60373+ >mRNA_C-linearis_contig90.16755.1 ID=mRNA_C-linearis_contig90.16755.1|Name=mRNA_C-linearis_contig90.16755.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at C-linearis_contig90:52501..60373+ (Chordaria linearis ClinC8C monoicous)back to top |