mRNA_C-linearis_contig9.16686.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16686.1
Unique NamemRNA_C-linearis_contig9.16686.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: D7FKM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI)

HSP 1 Score: 499 bits (1284), Expect = 1.860e-171
Identity = 295/413 (71.43%), Postives = 322/413 (77.97%), Query Frame = 1
Query:   52 LARPVANAYDPLSLNMGVGAQPSLGSTGRHKALTQRKPRATAATGTRPSCVDSSSIEGSSGTSLG-GSVSRGQFFGGILASSAALIACTXXXXXXXXXXXXXAKTRRREAENSSA--GQMETSDSELRPPAPVEPESAASSAISGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGASPELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGLFGVEPRKL 1281
            LA PVA+AY  L L+    A+P + +T R K   +R    +       SC +   + G S   LG GS SR QF GG+LASSAAL+ACT             A  ++ E  N+ A  GQ+E    +     P E ESAASSAISGLVAGA VSTSKQLLLYPVDTVKTRLQLP+ G+ PELFRGLYDG+LPPLLAGLPSGALFFS KDA STAISNVSGGQYA+LTT+ AVGLAQFPYWGIRTPAELLKIRSQAG SS SGAG +GAKSILADEG+ GLYTGYSSNIAYAFPADAIKFLVYG+LKR AKK KGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTA  DDEGYEGGV+GAL TI +EE  SALWAG  PR+ARSVLSGAIQFGSYEFVKGLFGVEPRKL
Sbjct:   13 LAWPVAHAYVQLGLH--AVARPDVLTTSRVKPQQRRSLYMSQG----ESCSNRR-VGGRSRAPLGAGSTSREQFLGGLLASSAALLACTAAAN---------AAEQKAEVSNAPAVAGQLEYQQPQPTAVVP-ESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPQDGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAPSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 408          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A7S1TRM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA)

HSP 1 Score: 233 bits (595), Expect = 4.180e-69
Identity = 133/271 (49.08%), Postives = 170/271 (62.73%), Query Frame = 1
Query:  472 SGLVAGAVVSTSKQLLLYPVDTVKTRLQLPR-GGASPELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKS-ILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGLFGVEPRK 1278
            +GL+AG V  T+K L+L+P DTVKTR+Q+    G    LF  LYDGILPPL+AG P  ALFF+VKD   +A    + G  + + T++AV LA  PYW ++TPAE +K R QA            A+S +   E    LY GY SN+AYAFP D IKFL+Y  LKR AK+  GG KLS +  A LGS ++  AQA+TTPLDV+RTR+M    D EG  G  V ALR   +EEG+  L+AGT  R+ R +L GA+QF +YE  K LFG +  K
Sbjct:   42 TGLLAGGVSRTAKLLVLHPADTVKTRVQVGAIAGRQGALFADLYDGILPPLVAGTPGSALFFAVKDLVQSAAREGAWGLDSRVVTMIAVFLANIPYWSLQTPAEAIKTRLQARDKDVEPVTPDPAESDVSLRERAEDLYAGYGSNLAYAFPVDVIKFLIYEELKRSAKEANGGQKLSPLRTAFLGSISAATAQALTTPLDVLRTRIMLKGADAEGGAGEEVAALRAAIEEEGVGVLFAGTPQRVLRGMLGGAVQFSTYEVSKQLFGEDFAK 312          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: W7TEJ8_9STRA (S-adenosylmethionine mitochondrial carrier n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ8_9STRA)

HSP 1 Score: 226 bits (576), Expect = 9.570e-65
Identity = 132/280 (47.14%), Postives = 170/280 (60.71%), Query Frame = 1
Query:  469 ISGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGASP-ELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQ-SSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAS--------PDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGLFGVEPRK 1278
            +SGL  GA    SK+L L+P+DT KTRLQ  +G  +P ELF+ LYDG+ P LL G P+GA FF+ KD       N  G ++ + TT+ AV  A  PYW IR PAE+LK + Q G   S +G  ++  K     EG+ GLY GY SNIAYAFP DAIKF+VY +L++   +     KL+ +E++VLGS AS  AQ ++TPLDVVRTR+MT          P        V    R I  EEG++ L++G  PRL R+ LSGAIQFGSYE  KG F  +  K
Sbjct:  173 LSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVK----QEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKGSK 443          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A0G4F9G4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE)

HSP 1 Score: 228 bits (580), Expect = 1.700e-64
Identity = 133/301 (44.19%), Postives = 186/301 (61.79%), Query Frame = 1
Query:  469 ISGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGA--SPELFRGLYDGILPPLLAGLPSGALFFSVKDACS-TAIS-----NVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRL---AKKVKGGA-KLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASPDDEG-------------------YEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGLFGVEPRK 1278
            +SGL++GA    +K+++L+P+DTVK RLQ   G    SP + +GLYDG++P L+ G P+G+LFF VKD  S TA+       + G     L+T+  V  A  PYW +R PAEL+K R Q G ++ S   ++  + ++ D+G+GGLY GY SN AYA P D +KFLVY ++KR    AK+ +G   KLST+E A+ G+ AS  AQ V+TPLDV+RTR+MT+    +G                   YEG ++   R I + EG   L+AG +PR+AR+V+SGAIQF +YE VK LFG E  K
Sbjct:  222 LSGLLSGAASRIAKEVVLHPIDTVKARLQFREGARVFSPSMLKGLYDGVVPALVVGTPAGSLFFGVKDVASKTALEVLKAKGIEGLTGTQLSTIAGVVAASIPYWAVRQPAELVKTRRQTGVATDS---VKAFQEVVEDDGIGGLYQGYGSNFAYAVPTDIVKFLVYDNVKRQWQQAKRQRGEKDKLSTLEGAIGGAAASCVAQIVSTPLDVIRTRLMTSEKKRKGRLTAEEGQGXXXXXXXXREYEG-ILDCGRKIVEREGAGMLFAGISPRIARAVVSGAIQFSTYELVKNLFGEEAAK 518          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A8J5XTW0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTW0_DIALT)

HSP 1 Score: 221 bits (564), Expect = 1.400e-63
Identity = 128/282 (45.39%), Postives = 171/282 (60.64%), Query Frame = 1
Query:  487 GAVVSTSKQLLLYPVDTVKTRLQLP---RGGASPELFRGLYDGILPPLLAGLPSGALFFSVKDACST----AISNVSGGQYA-DLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASPDDEGYEGGVVGAL------RTIGQ-------EEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGLFGVE 1269
            GA    +K+LLL+P+DTV+ RL+L    R   +P LF  LY G+LP  + G+PSGALFF+ KD        A+ +  GG Y+ ++TTV+AV  AQ PYW +RTP ELLK R+Q G ++      + A  ++  EGV GL+ G  SN+AYA P D +KF+ Y S+KR AK+ KGG  LST+EA+  G+  S  AQA+ TPLDVVRTRV+ A P     +G    A       R  G+       E+G  AL+AG  PR+ R+V SG IQFG+YE  + LFG  
Sbjct:  108 GAAQRLAKELLLHPIDTVRCRLELQGARRSLLAPGLFADLYAGVLPSAVVGVPSGALFFAAKDGAKAWLRGALGSAYGGSYSKEVTTVLAVLAAQLPYWALRTPFELLKTRAQLGLTAGGEGAWRSAARVVEAEGVAGLFVGAGSNVAYAAPTDVVKFVAYESIKRQAKRAKGGGSLSTLEASACGALGSAIAQALCTPLDVVRTRVIAAQPTGGVADGAATDAAIELADARNFGKVAARLVREDGAGALFAGLLPRVGRAVASGGIQFGAYEATRRLFGAS 389          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A0M0K8D7_9EUKA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA)

HSP 1 Score: 214 bits (545), Expect = 1.330e-61
Identity = 118/264 (44.70%), Postives = 172/264 (65.15%), Query Frame = 1
Query:  469 ISGLVAGAVVSTSKQLLLYPVDTVKTRLQLP---RGGASPELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVK 1251
            +SGL+AG    T K++ L+P+DTVKTRLQL    RG   P L++ +Y G+ P +++G P+ ++FF++KD+    +    G       TV AVG A   YW +R PAE++K+R Q+G  S S A    A ++  + G GG Y GY+SN+AYAFP D+ KF++Y ++K   ++ KGGAKLS +EAAV G+ A++AAQ V+TPLDV RTR+MT   D      GV+  L+ +  EEG+  L+AG  P++AR+++SGA+QF   E VK
Sbjct:   59 LSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRGLLDPALYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDTGG---TVAAVGCANLVYWLVRNPAEVIKVRRQSGGESDSAAA---ATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMTLPADQPAP--GVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: R1E8V3_EMIHU (S-adenosylmethionine mitochondrial carrier protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8V3_EMIHU)

HSP 1 Score: 207 bits (527), Expect = 1.190e-58
Identity = 124/279 (44.44%), Postives = 167/279 (59.86%), Query Frame = 1
Query:  445 PESAASSAISGLVAGAVVSTSKQLLLYPVDTVKTRLQLP---------RGGASPELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSS-RSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVK 1251
            P SAA+   SGL+AGAV  T K+L L+P+DT K RLQ P         R     ELF+  YDG+ P L++G P+ + FF+VKD    A++ +  G+    TTV+AV  A   YWGI+ P+E+LK+R QAG +S  +GA ++    I   EGV G Y+    N AY+ P D +KFL+Y  LK      +G + LS +EAAV G+ A+  AQA+ TPLDV R R+MT+         GV   LR +  EEG  ALWAG  P++AR++ SGAIQF +YE  K
Sbjct:   70 PPSAAAEFWSGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGGRRAVLGELFKSPYDGLAPALISGAPAASAFFAVKDGAKRAVAGLQLGKAE--TTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGAAVE----IWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTSDAT------GVAATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A7S4C3C4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3C4_CHRCT)

HSP 1 Score: 207 bits (526), Expect = 3.030e-58
Identity = 119/264 (45.08%), Postives = 171/264 (64.77%), Query Frame = 1
Query:  472 SGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGASPELFRGL-YDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT---ASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVK 1251
            SGL+AGAV  T+K+L+L+P+DTVKTR+Q  R   + +LF    + G+ P + +G P+ ++FF+VKDA     + +     A   T++AV  A  PYW +R P E++K R QAG    S   L+ A+ + A+EG+ G YTGY SN AYA+P D+IKF++Y  LK+  +  KGGAKLS +E+AV G+ ++++AQ++ TPLDV RTR MT    +P     E      +R I  EEG+ AL++G TP+  R+VLSGAIQF +YE  K
Sbjct:  109 SGLIAGAVQKTAKELVLHPLDTVKTRVQTSRRALTLDLFLDRPFAGLGPAITSGAPAASVFFAVKDAVKQRANALQLDTSA--ATLLAVACANVPYWLVRNPTEVIKARRQAGIVDDS---LEAARKLYAEEGLRGFYTGYVSNYAYAYPVDSIKFVLYELLKKRVRAAKGGAKLSAVESAVGGAVSAVSAQSLATPLDVARTRAMTRPAGAPPMSPIE-----CVRAIAAEEGLPALFSGVTPKAVRAVLSGAIQFSTYEATK 362          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A0G4FJA6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FJA6_VITBC)

HSP 1 Score: 207 bits (526), Expect = 1.220e-57
Identity = 126/289 (43.60%), Postives = 162/289 (56.06%), Query Frame = 1
Query:  469 ISGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGASPELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT----------ASPDDEGYE----------------GGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGL 1257
            ISGL  G      K  +L+P+DT++ RLQL R   +  LF  LY GI+PPL+ G P+ ALFF VKD     ++         + T  AV  A  PYW +RTP+E++K R QAG ++ +   L G +  +  +G+GGLYTGY++NIAYA+P D IKFLVY SLK        G +L+ +E    GS AS  AQ  T PLDV+RTR+MT          ASP                       G+V     I  EEG + LW+G +PRL R+VLSGAIQFGSYE VKGL
Sbjct:  145 ISGLAGGGASRLGKDAILHPLDTLRARLQL-RNQTNDGLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNT---LDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAAL-----GGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPAXXXXXXXXXXXXXXXXXXAAYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKGL 424          
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Match: A0A7S3JUU9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUU9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 9.020e-57
Identity = 124/273 (45.42%), Postives = 166/273 (60.81%), Query Frame = 1
Query:  469 ISGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGA---SPELFRGLYDGILPPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWGIRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYAFPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT-----ASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVLSGAIQFGSYEFVKGLFG 1263
            ISGL  GA    SK ++L+P+DTVKTRLQ  R G+   +  +F   +DGIL PLL G+P+GALFF VKDA  TA+  +  G   DL     V +A  PYW IR+P EL+K+R Q   ++ +  G+  AK I+  EG+ GLY G   + AYA P D +KF VY  LK+ +  +     L   + A+LGS AS +AQ VTTPLDVVRTR M      ++    G +  +      I +EEG+ ALW+G +PRL R+++SG +QFGSYEF K  FG
Sbjct:   76 ISGLAGGAAQRLSKDIVLHPIDTVKTRLQ--RAGSRRLTRRIFADPFDGILAPLLIGVPAGALFFGVKDA--TAV--LCKGFNEDLVEFTTVAVANGPYWFIRSPTELIKVRQQLDGTTINMTGITLAKDIIQKEGLSGLYVGAIESYAYALPTDLVKFYVYRKLKKSSLPLTSTKNL-VAKKAILGSIASASAQLVTTPLDVVRTRAMEKRTPQSTTTTTGGDLSIPERTLAIIREEGVGALWSGISPRLLRALVSGGLQFGSYEFTKKAFG 341          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKM9_ECTSI1.860e-17171.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1TRM5_9STRA4.180e-6949.08Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TEJ8_9STRA9.570e-6547.14S-adenosylmethionine mitochondrial carrier n=3 Tax... [more]
A0A0G4F9G4_9ALVE1.700e-6444.19Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A8J5XTW0_DIALT1.400e-6345.39Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A0M0K8D7_9EUKA1.330e-6144.70S-adenosylmethionine mitochondrial carrier protein... [more]
R1E8V3_EMIHU1.190e-5844.44S-adenosylmethionine mitochondrial carrier protein... [more]
A0A7S4C3C4_CHRCT3.030e-5845.08Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0G4FJA6_VITBC1.220e-5743.60Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S3JUU9_9STRA9.020e-5745.42Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2957308..2961171 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score502.7
Seed ortholog evalue1.7e-139
Seed eggNOG ortholog2880.D7FKM9
KEGG koko:K15111
KEGG TC2.A.29.18
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-09_000830.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons7
Model size1570
Cds size1272
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930755.9745831-UTR-C-linearis_contig9:2957307..29575931622930755.9745831-UTR-C-linearis_contig9:2957307..2957593Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2957308..2957593 -
1690881233.0719101-UTR-C-linearis_contig9:2957307..29575931690881233.0719101-UTR-C-linearis_contig9:2957307..2957593Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2957308..2957593 -
1622930756.1143842-UTR-C-linearis_contig9:2961159..29611711622930756.1143842-UTR-C-linearis_contig9:2961159..2961171Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2961160..2961171 -
1690881233.172923-UTR-C-linearis_contig9:2961159..29611711690881233.172923-UTR-C-linearis_contig9:2961159..2961171Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2961160..2961171 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930755.989441-CDS-C-linearis_contig9:2957593..29577601622930755.989441-CDS-C-linearis_contig9:2957593..2957760Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2957594..2957760 -
1690881233.0872252-CDS-C-linearis_contig9:2957593..29577601690881233.0872252-CDS-C-linearis_contig9:2957593..2957760Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2957594..2957760 -
1622930756.0061002-CDS-C-linearis_contig9:2958233..29584111622930756.0061002-CDS-C-linearis_contig9:2958233..2958411Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2958234..2958411 -
1690881233.0992858-CDS-C-linearis_contig9:2958233..29584111690881233.0992858-CDS-C-linearis_contig9:2958233..2958411Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2958234..2958411 -
1622930756.0244606-CDS-C-linearis_contig9:2958901..29590461622930756.0244606-CDS-C-linearis_contig9:2958901..2959046Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2958902..2959046 -
1690881233.1106536-CDS-C-linearis_contig9:2958901..29590461690881233.1106536-CDS-C-linearis_contig9:2958901..2959046Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2958902..2959046 -
1622930756.0431955-CDS-C-linearis_contig9:2959432..29595861622930756.0431955-CDS-C-linearis_contig9:2959432..2959586Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2959433..2959586 -
1690881233.1233485-CDS-C-linearis_contig9:2959432..29595861690881233.1233485-CDS-C-linearis_contig9:2959432..2959586Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2959433..2959586 -
1622930756.05872-CDS-C-linearis_contig9:2959870..29599671622930756.05872-CDS-C-linearis_contig9:2959870..2959967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2959871..2959967 -
1690881233.1365123-CDS-C-linearis_contig9:2959870..29599671690881233.1365123-CDS-C-linearis_contig9:2959870..2959967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2959871..2959967 -
1622930756.080503-CDS-C-linearis_contig9:2960195..29603861622930756.080503-CDS-C-linearis_contig9:2960195..2960386Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2960196..2960386 -
1690881233.1465054-CDS-C-linearis_contig9:2960195..29603861690881233.1465054-CDS-C-linearis_contig9:2960195..2960386Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2960196..2960386 -
1622930756.0981371-CDS-C-linearis_contig9:2960819..29611591622930756.0981371-CDS-C-linearis_contig9:2960819..2961159Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2960820..2961159 -
1690881233.156977-CDS-C-linearis_contig9:2960819..29611591690881233.156977-CDS-C-linearis_contig9:2960819..2961159Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2960820..2961159 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16686.1prot_C-linearis_contig9.16686.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 2957594..2961159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16686.1

>prot_C-linearis_contig9.16686.1 ID=prot_C-linearis_contig9.16686.1|Name=mRNA_C-linearis_contig9.16686.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=424bp
MASCSLATLVAIFLARPVANAYDPLSLNMGVGAQPSLGSTGRHKALTQRK
PRATAATGTRPSCVDSSSIEGSSGTSLGGSVSRGQFFGGILASSAALIAC
TSAASAATLSAGDAAKTRRREAENSSAGQMETSDSELRPPAPVEPESAAS
SAISGLVAGAVVSTSKQLLLYPVDTVKTRLQLPRGGASPELFRGLYDGIL
PPLLAGLPSGALFFSVKDACSTAISNVSGGQYADLTTVVAVGLAQFPYWG
IRTPAELLKIRSQAGQSSRSGAGLQGAKSILADEGVGGLYTGYSSNIAYA
FPADAIKFLVYGSLKRLAKKVKGGAKLSTIEAAVLGSGASLAAQAVTTPL
DVVRTRVMTASPDDEGYEGGVVGALRTIGQEEGISALWAGTTPRLARSVL
SGAIQFGSYEFVKGLFGVEPRKL*
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mRNA from alignment at C-linearis_contig9:2957308..2961171-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16686.1 ID=mRNA_C-linearis_contig9.16686.1|Name=mRNA_C-linearis_contig9.16686.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3864bp|location=Sequence derived from alignment at C-linearis_contig9:2957308..2961171- (Chordaria linearis ClinC8C monoicous)
TGTCACGTAGTCATGGCTTCCTGCTCATTGGCGACGCTCGTCGCCATCTT CTTGGCGCGGCCAGTAGCAAACGCGTATGATCCCCTTAGTTTGAATATGG GTGTTGGAGCCCAACCCAGCCTTGGAAGCACAGGACGGCATAAGGCTTTG ACTCAGCGTAAACCTCGGGCAACAGCAGCAACAGGCACACGTCCATCATG TGTCGACAGCAGTAGCATCGAGGGCAGCTCAGGAACATCCCTGGGGGGAA GCGTTAGCAGAGGGCAGTTCTTTGGGGGAATTTTGGCGTCCTCCGCAGCA TTGATTGCGTGTACATCAGCGGCCAGCGCAGCAACCTTGAGCGCGGGAGA TGGTGCGGCCCAAAGAAGCGGTAGGCCTGCAAAATAGGCAATCCTACTCG GTAGGATCCAGTAGATAAATCAGCCATCTTTTTCCAACCCGCTTTATCGT CGTTTTTCTTCTTCCCTCTCCCAATATGCATCTCTGTATTTTAGATGGAT ATCACGGTAAGAGATAGGTGCCATGCACTCATGCACCGCCTGTCGTACGT AGATGACAAGTTCCCATCTGCGAGCTGACAGTGTCACATCCGCCAAGCTG CAGCAGGTGCACGCAGCAACAAATGCCAGCTGTTATGTCGTGTGTCCAGC GGACCCCAGCGACTGAGAAGGCTGTGGTCAGCGGCGCGAATGGAAGCCCA TTGAATGACCTCACCCCCGATTAACCGCACGTGTGTTGCGCGGCTCTTCT GCTCGACTCTTGTCTACCCTTTGCGGGCGAACCAGCAGCAAAAACGAGGC GCAGAGAGGCCGAGAATTCGTCTGCCGGTCAGATGGAAACCTCCGACAGC GAACTGCGACCACCGGCGCCGGTCGAACCAGAATCCGCAGCATCGAGCGC GATCTCGGGTCTGGTGGCTGGTGCTGTGGTGTCTACCTCCAAGCAGTTGC TTCTTTATCCCGTCGATACCGTCAAGGTACGTGTGTTGTTGACGGCAGCT TGTCGCCACAGAGATACCGTTTGAGACTCATAACTCTACCCCGATGTTTA CACACACACGCGCACACACACACACAAACATGACATAGATTGCCGTGGAC GATACCGCAGCATACAATATGTTAGAGTCTTCCGCAACAGGCTGACCGGG CATTGACAGCTGTTTTTTCCCTCCTATTTTGTCACTACCTGTATTGCTGT GCAGACTCGGCTGCAACTTCCGCGGGGCGGTGCGTCTCCGGAACTATTTC GTGGTCTGTACGACGGCATCCTACCTCCCCTCTTGGCCGGGCTGCCCTCT GGTAAGCTCAATTTCAGAGAGGGTGTTGCCAGACAGCTGGGCAGGTTGTT GATTGATGCACTCCATGCTTACAGCACCACTCCGACAGGTACTTCTAGGA GTCCCACCAAGGCTAGTACGGACGAATTTTGGGAAGATAGCATCATGTTT CGAGTGCGCCCGAGGGCTGACTAATCGGTGCTGTTGATGCTGTTATCGTG AAGTTGGTCGCATGGTCGTTATTTCACGGTTTCCATTGCCCAAGTCTTCG TGTCTCTCCCACGGAACGTTCGGCCCCATTTGCAGGCGCCCTTTTTTTTT CGGTGAAGGACGCCTGTAGCACGGCGATAAGCAACGTCTCGGGGGGGCAG TACGCGGATCTCACGACAGTGGTAGCGGTGGGCCTTGCGCAGTTTCCTTA CTGGGGCATCCGCACTCCGGCAGAGCTGCTCAAGATTCGGTAAGCATACG ACGCTGAAAAAGGACGTCGTGTTCCTTTACAGCTAGTGGGTGATGCTGTT TTGTTAGAACCGCCTGTTTTCTCTTACACGGCGCCGCGACGAACGTCGAC CGTCACCGAGAAGAGCCTGATCGAGGCTTCCGTTATTCTCAGATGTTGGC TCTTCGGAACAGGCGCGACCCGGCGTGTGGTGTGAACCGTCGATCCAGTT TTCCCACGAGTCGCAGCTGTTGAAATTAGTCGAAATCCCCGAATGTTGAG ACTGCTCGCGTTTCGGCCGCGGTGAATTGTACAGCAGTAGTGACGTCGCC ATCCACCCTCTAGAGGGCCGATTTACTTGTTTTTCTTCTCCCCTGACTGC GCATGAAAACATTTGCTTCTCGCAGGTCTCAGGCTGGACAATCGAGCAGG AGCGGAGCAGGCCTTCAAGGCGCAAAGTCTATCCTGGCCGACGAGGGCGT GGGGGGGCTGTACACGGGCTACTCCTCCAACATCGCCTACGCGTTTCCGG CGGATGCTATAAAATTCTTGGTGAGATATGCACAAGGCGAACTGAGTAAT CTGCGAACGTGTGCACCGAAGTTATCTGTTGCTACAGAGAGGAATTTCGA GATATATATGCCCCATTGAAGGGTATCGGTTCTCAAATTTGCCGTGGTCA ACGGTAGGGGTGGGGGTGAGCATTTTGTGCGTGCAGAAAGACGGCACGGT AGGCGCAGCACAGACGTTTTTGCCAGGTAAATATTATTATACACATGCCC GAGGACAGGTTACGACTATCTCGCTCAGTACGAAAGGACCCCCGCCGCCG ACAAGGGCATGTGTATCTCTGAAGGAGGCGATACATGGTGTTTTGAAGCG CCACTTTCGTTACGGAGCACTCGGAATGTACGACGAGTTGTGTTGGTTTG ATCTCGGCGAATATTTTGGTGCGTTGTCACCTACAAATATTAACAGTGTC TTACCCCGAAACCGCAGCAGTTCTAAGTGTTCGCTCGTACACCCGCCGCC TGGAATACAGGTGTACGGGTCCCTAAAAAGATTGGCAAAGAAGGTCAAAG GCGGTGCCAAACTGAGCACCATCGAAGCCGCCGTGCTGGGATCTGGAGCG AGCCTCGCCGCTCAAGCCGTCACCACTCCGTTGGACGTCGTGCGCACGAG AGTGATGACCGCATCTCCGGACGATGAGGGGTACGAAGGTGTGGAAAACC ATCCGTTGCCTTTTGTCACCTTTATCATGTGCGAAAAGGTTTATCCCGGC TTCGTGAGCGTAGTTCAGCCTGTTTGGGATCCCTCCTGTGATTGTAACGG AGGAGCTACGTCGCACGCTGGTCAGAGTCAGCCCTACCGAGGTCTCAAGT GACTACGAAACCACCCCGTAGCTTATTTGGACCCTACGCATGGTACGGTC TTTGGCGCGTTATGCCCTCACGGTTTTGATGGATGGGTTAATTTGCGGTT TCGAGTCAACGTGCTGAACCCTTTCGTTCCATCCAACACCATGCCGTGTT CTCGAAGCACCAGCACTGTATACCTTTCCCTGAACGACTGGGAAAGCGCC AAAGCGGTAGCCACTACTATTCTCTCGCCGCCCTTCTCCACAAAGCATGC GCGTTCTTTTGGACGTTGGACAACGGTCACACGATTACAACAACCCTCTC CATGTCACCAGGAGGCGTCGTGGGCGCGCTTAGGACTATAGGGCAAGAGG AGGGGATTTCAGCTCTTTGGGCGGGCACCACGCCTCGCTTAGCGCGGTCT GTTCTGAGCGGCGCGATCCAGTTCGGGTCTTACGAATTTGTTAAGGGGCT CTTTGGCGTCGAGCCGCGAAAGCTATGAGCATGTATTATCAAAACCAGTG TCTTGCTTGGATCGCGTCGGTGGAGTACTCGTGGCGCAGTGGAAATATCG TTCAAGCGACGTCGCCCTCTGAGCGGAGTTCAGATCACCACACACCATGT ACCATGTAGAGTGGTGTGTTTGTTGCGATGAAGCCACGCAAGAGCGGGCG GTTTTTTCTTTTTGGTTTTTGGTGCTGTGTTTGTGAAAGGTGGCACGAGC GCTACAGTAGCTCTTGGGAGCTGAGGAGGTTGTTACTGGGGTGTTGAATA TCGAATCAAAAATG
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Coding sequence (CDS) from alignment at C-linearis_contig9:2957308..2961171-

>mRNA_C-linearis_contig9.16686.1 ID=mRNA_C-linearis_contig9.16686.1|Name=mRNA_C-linearis_contig9.16686.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2544bp|location=Sequence derived from alignment at C-linearis_contig9:2957308..2961171- (Chordaria linearis ClinC8C monoicous)
ATGGCTTCCTGCTCATTGGCGACGCTCGTCGCCATCTTCTTGGCGCGGCC
AGTAGCAAACGCGTATGATCCCCTTAGTTTGAATATGGGTGTTGGAGCCC
AACCCAGCCTTGGAAGCACAGGACGGCATAAGGCTTTGACTCAGCGTAAA
CCTCGGGCAACAGCAGCAACAGGCACACGTCCATCATGTGTCGACAGCAG
TAGCATCGAGGGCAGCTCAGGAACATCCCTGGGGGGAAGCGTTAGCAGAG
GGCAGTTCTTTGGGGGAATTTTGGCGTCCTCCGCAGCATTGATTGCGTGT
ACATCAGCGGCCAGCGCAGCAACCTTGAGCGCGGGAGATGATGGCTTCCT
GCTCATTGGCGACGCTCGTCGCCATCTTCTTGGCGCGGCCAGTAGCAAAC
GCGTATGATCCCCTTAGTTTGAATATGGGTGTTGGAGCCCAACCCAGCCT
TGGAAGCACAGGACGGCATAAGGCTTTGACTCAGCGTAAACCTCGGGCAA
CAGCAGCAACAGGCACACGTCCATCATGTGTCGACAGCAGTAGCATCGAG
GGCAGCTCAGGAACATCCCTGGGGGGAAGCGTTAGCAGAGGGCAGTTCTT
TGGGGGAATTTTGGCGTCCTCCGCAGCATTGATTGCGTGTACATCAGCGG
CCAGCGCAGCAACCTTGAGCGCGGGAGATGCAGCAAAAACGAGGCGCAGA
GAGGCCGAGAATTCGTCTGCCGGTCAGATGGAAACCTCCGACAGCGAACT
GCGACCACCGGCGCCGGTCGAACCAGAATCCGCAGCATCGAGCGCGATCT
CGGGTCTGGTGGCTGGTGCTGTGGTGTCTACCTCCAAGCAGTTGCTTCTT
TATCCCGTCGATACCGTCAAGCAGCAAAAACGAGGCGCAGAGAGGCCGAG
AATTCGTCTGCCGGTCAGATGGAAACCTCCGACAGCGAACTGCGACCACC
GGCGCCGGTCGAACCAGAATCCGCAGCATCGAGCGCGATCTCGGGTCTGG
TGGCTGGTGCTGTGGTGTCTACCTCCAAGCAGTTGCTTCTTTATCCCGTC
GATACCGTCAAGACTCGGCTGCAACTTCCGCGGGGCGGTGCGTCTCCGGA
ACTATTTCGTGGTCTGTACGACGGCATCCTACCTCCCCTCTTGGCCGGGC
TGCCCTCTGACTCGGCTGCAACTTCCGCGGGGCGGTGCGTCTCCGGAACT
ATTTCGTGGTCTGTACGACGGCATCCTACCTCCCCTCTTGGCCGGGCTGC
CCTCTGGCGCCCTTTTTTTTTCGGTGAAGGACGCCTGTAGCACGGCGATA
AGCAACGTCTCGGGGGGGCAGTACGCGGATCTCACGACAGTGGTAGCGGT
GGGCCTTGCGCAGTTTCCTTACTGGGGCATCCGCACTCCGGCAGAGCTGC
TCAAGATTCGGCGCCCTTTTTTTTTCGGTGAAGGACGCCTGTAGCACGGC
GATAAGCAACGTCTCGGGGGGGCAGTACGCGGATCTCACGACAGTGGTAG
CGGTGGGCCTTGCGCAGTTTCCTTACTGGGGCATCCGCACTCCGGCAGAG
CTGCTCAAGATTCGGTCTCAGGCTGGACAATCGAGCAGGAGCGGAGCAGG
CCTTCAAGGCGCAAAGTCTATCCTGGCCGACGAGGGCGTGGGGGGGCTGT
ACACGGGCTACTCCTCCAACATCGCCTACGCGTTTCCGGCGGATGCTATA
AAATTCTTGGTCTCAGGCTGGACAATCGAGCAGGAGCGGAGCAGGCCTTC
AAGGCGCAAAGTCTATCCTGGCCGACGAGGGCGTGGGGGGGCTGTACACG
GGCTACTCCTCCAACATCGCCTACGCGTTTCCGGCGGATGCTATAAAATT
CTTGGTGTACGGGTCCCTAAAAAGATTGGCAAAGAAGGTCAAAGGCGGTG
CCAAACTGAGCACCATCGAAGCCGCCGTGCTGGGATCTGGAGCGAGCCTC
GCCGCTCAAGCCGTCACCACTCCGTTGGACGTCGTGCGCACGAGAGTGAT
GACCGCATCTCCGGACGATGAGGGGTACGAAGGTGTACGGGTCCCTAAAA
AGATTGGCAAAGAAGGTCAAAGGCGGTGCCAAACTGAGCACCATCGAAGC
CGCCGTGCTGGGATCTGGAGCGAGCCTCGCCGCTCAAGCCGTCACCACTC
CGTTGGACGTCGTGCGCACGAGAGTGATGACCGCATCTCCGGACGATGAG
GGGTACGAAGGAGGCGTCGTGGGCGCGCTTAGGACTATAGGGCAAGAGGA
GGGGATTTCAGCTCTTTGGGCGGGCACCACGCCTCGCTTAGCGCGGTCTG
TTCTGAGCGGCGCGATCCAGTTCGGGTCTTACGAATTTGTTAAGGGGCTC
TTTGGCGTCGAGCCGCGAAAGCTATGAGAGGCGTCGTGGGCGCGCTTAGG
ACTATAGGGCAAGAGGAGGGGATTTCAGCTCTTTGGGCGGGCACCACGCC
TCGCTTAGCGCGGTCTGTTCTGAGCGGCGCGATCCAGTTCGGGTCTTACG
AATTTGTTAAGGGGCTCTTTGGCGTCGAGCCGCGAAAGCTATGA
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