mRNA_C-linearis_contig9.16652.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16652.1
Unique NamemRNA_C-linearis_contig9.16652.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig9.16652.1 vs. uniprot
Match: D7FVG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG5_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.760e-42
Identity = 409/668 (61.23%), Postives = 463/668 (69.31%), Query Frame = 2 
Query:  221 MYYVQSAGNSGAP-PSIPNFWDAYPLLSE--GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPCSTNEDRGVRRRRRGRNNANNKRMVHSVGARVQVAGNSSVGSSGSGAHGAVAAAAASSPEVLPEWLGGLGLDKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AEDGDSGWGQEKKRHEGASEEGKITTVESAKRSSGSQEREGRGEAGDGGRGLGRGDAVARDVWMQQRLGLDDDAMAIMRETHMHVLKYRDREHLEPKLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNIHVATLEKKIDFLRGEEVNLTTVEIKRIVRNSPAILTFSIDENMRPKLEWLRERMGLDGDGIRKMLGQNARVLSLKAETIEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYNIEDNLEPTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASGKPLMYSLEKRWRARVARIRARGVTPCFGDHWKPIANRTPAKFDDWLETL 2212
            M+ VQS  +SG P P I NFWDA P L    GA                                  SPP +  +D       R R+ A  +  VH   A  QV+      SSG       A+AAA +PE  P W+G LGLD+  XXXXXXXXXXXXXXXXXXX                                          E  +S   Q+++      +E ++T +E+   ++ S+  + +          G+     R  W+Q+RL L+D  +A M E +   L YR  E+LEPKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      TL+KK+ FLRGEE+NL+ VE+KRIVRNSP+  TFS++ENMRPKL WLRERMGLD  GIRK++G++ RVL+LK ETIE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Y++EDN+EPTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GK L+YSLEKRW+ RVARIRA+GVTPCF DHWKPIANR+PAKFD+WL TL
Sbjct:    1 MFAVQSVPSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHGSSIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRNSXXXRSRS-AKERHPVHGAVACQQVS------SSGP----TTASAAAPAPETPPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXXXADAKLVQATRELVVSMKGPKTEHVIRGKPKRRGRPRKNPSLVEVKESSESQQRR------DEKEVTRIEAENLANASKAAKAKELLNVPVEATGKSTTEERGRWIQERLLLNDATLAKMMEFYPQCLSYRIVENLEPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDKKLAFLRGEELNLSDVEVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDAIGIRKLVGRSPRVLALKVETIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAYSVEDNIEPTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKALLYSLEKRWKPRVARIRAKGVTPCFHDHWKPIANRSPAKFDEWLTTL 651
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BLAST of mRNA_C-linearis_contig9.16652.1 vs. uniprot
Match: A0A6H5JCT3_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT3_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.820e-16
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 2 
Query: 1364 LTTVEIKRIVRNSPAILTFSIDENMRPKLEWLRERMGLDGDGIRKMLGQNARVLSLKAETIEG 1552
            +  VE+KRIVRNSP+  TFS++ENMRPKL WLRERMGLD  GIRK++G++ RVL+LK ETIEG
Sbjct:  481 MNQVEVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDVIGIRKLVGRSPRVLALKVETIEG 543
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BLAST of mRNA_C-linearis_contig9.16652.1 vs. uniprot
Match: A0A6H5JDC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC9_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.620e-5
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 2 
Query: 2072 LMYSLEKRWRARVARIRARGVTPCFGDHWKPIANRTPAKFDDWLETL*RLRG 2227
            LMYSL+KRWR RVA +R+  V P F  HW+P+A R    F  WLE    L G
Sbjct:  562 LMYSLDKRWRPRVAHMRSLRVKPVFSAHWRPMATRDDESFGAWLEEQQTLLG 613
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVG5_ECTSI2.760e-4261.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCT3_9PHAE5.820e-1669.84Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5JDC9_9PHAE4.620e-551.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2380083..2386931 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score179.5
Seed ortholog evalue5.2e-42
Seed eggNOG ortholog2880.D7FVG5
KEGG koko:K15031,ko:K15032
Hectar predicted targeting categoryother localisation
EggNOG free text desc.termination of mitochondrial transcription
EggNOG OGsKOG1267@1,KOG1267@2759
Ec32 ortholog descriptionMitochodrial transcription termination factor
Ec32 orthologEc-09_001000.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Exons7
Model size3113
Cds size1995
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930703.0950398-UTR-C-linearis_contig9:2380082..23801921622930703.0950398-UTR-C-linearis_contig9:2380082..2380192Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2380083..2380192 +
1690881205.5000737-UTR-C-linearis_contig9:2380082..23801921690881205.5000737-UTR-C-linearis_contig9:2380082..2380192Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2380083..2380192 +
1622930703.112482-UTR-C-linearis_contig9:2381010..23811201622930703.112482-UTR-C-linearis_contig9:2381010..2381120Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2381011..2381120 +
1690881205.5166247-UTR-C-linearis_contig9:2381010..23811201690881205.5166247-UTR-C-linearis_contig9:2381010..2381120Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2381011..2381120 +
1622930703.2246487-UTR-C-linearis_contig9:2386033..23869311622930703.2246487-UTR-C-linearis_contig9:2386033..2386931Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2386034..2386931 +
1690881205.5927362-UTR-C-linearis_contig9:2386033..23869311690881205.5927362-UTR-C-linearis_contig9:2386033..2386931Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2386034..2386931 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930703.1242077-CDS-C-linearis_contig9:2381120..23818921622930703.1242077-CDS-C-linearis_contig9:2381120..2381892Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2381121..2381892 +
1690881205.526667-CDS-C-linearis_contig9:2381120..23818921690881205.526667-CDS-C-linearis_contig9:2381120..2381892Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2381121..2381892 +
1622930703.1363487-CDS-C-linearis_contig9:2381992..23820751622930703.1363487-CDS-C-linearis_contig9:2381992..2382075Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2381993..2382075 +
1690881205.5362535-CDS-C-linearis_contig9:2381992..23820751690881205.5362535-CDS-C-linearis_contig9:2381992..2382075Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2381993..2382075 +
1622930703.154516-CDS-C-linearis_contig9:2382636..23829331622930703.154516-CDS-C-linearis_contig9:2382636..2382933Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2382637..2382933 +
1690881205.5465791-CDS-C-linearis_contig9:2382636..23829331690881205.5465791-CDS-C-linearis_contig9:2382636..2382933Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2382637..2382933 +
1622930703.1742232-CDS-C-linearis_contig9:2383246..23834081622930703.1742232-CDS-C-linearis_contig9:2383246..2383408Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2383247..2383408 +
1690881205.557523-CDS-C-linearis_contig9:2383246..23834081690881205.557523-CDS-C-linearis_contig9:2383246..2383408Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2383247..2383408 +
1622930703.1923323-CDS-C-linearis_contig9:2383917..23842681622930703.1923323-CDS-C-linearis_contig9:2383917..2384268Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2383918..2384268 +
1690881205.5692537-CDS-C-linearis_contig9:2383917..23842681690881205.5692537-CDS-C-linearis_contig9:2383917..2384268Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2383918..2384268 +
1622930703.2051184-CDS-C-linearis_contig9:2385703..23860331622930703.2051184-CDS-C-linearis_contig9:2385703..2386033Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2385704..2386033 +
1690881205.582149-CDS-C-linearis_contig9:2385703..23860331690881205.582149-CDS-C-linearis_contig9:2385703..2386033Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2385704..2386033 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16652.1prot_C-linearis_contig9.16652.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 2381121..2386033 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16652.1

>prot_C-linearis_contig9.16652.1 ID=prot_C-linearis_contig9.16652.1|Name=mRNA_C-linearis_contig9.16652.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=665bp
MYYVQSAGNSGAPPSIPNFWDAYPLLSEGAGAGGGGGGGAGGSSARLLRC
FLSLPSPSPSPLPLSPPCSTNEDRGVRRRRRGRNNANNKRMVHSVGARVQ
VAGNSSVGSSGSGAHGAVAAAAASSPEVLPEWLGGLGLDKEEEEDLVAAF
AALPEPPPPAAADAKLVKAARDLVVSMKKPKRAAGGAAGGGGRGGGRGGV
VAEDGDSGWGQEKKRHEGASEEGKITTVESAKRSSGSQEREGRGEAGDGG
RGLGRGDAVARDVWMQQRLGLDDDAMAIMRETHMHVLKYRDREHLEPKLD
WLQKELDLDAQALGKIVSSAPAILRLSIEGSIKPKLGWVRTTLGLDRRAT
AKLMVSWPSLFNIHVATLEKKIDFLRGEEVNLTTVEIKRIVRNSPAILTF
SIDENMRPKLEWLRERMGLDGDGIRKMLGQNARVLSLKAETIEGKLMWLE
GRLGMDREKAAKVVLTFPVMLSMALNTMDWKIVWLQQRLSLTRDQMMAMV
VKYPNLLSYNIEDNLEPTLKWLEEDLGVDTAVAGKLVLRQPRLLSANLED
NLKNKVPWMMQNLNLPRDVVLEVITGCPDVLNLSTERNLGPTIQFFYDEM
GASKDEVSEMVAASGKPLMYSLEKRWRARVARIRARGVTPCFGDHWKPIA
NRTPAKFDDWLETL*
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mRNA from alignment at C-linearis_contig9:2380083..2386931+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16652.1 ID=mRNA_C-linearis_contig9.16652.1|Name=mRNA_C-linearis_contig9.16652.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6849bp|location=Sequence derived from alignment at C-linearis_contig9:2380083..2386931+ (Chordaria linearis ClinC8C monoicous)
CGTCTCTATAATCGCGTCGGGTGTCTGTCGGCCACGCACAGCTGGGCGGA
TTGGACAGTTTGTGGAGAGCCTACAGCAGCGTGTACAGCTTTTCTTCGCG
GCTCTAGAGGGTGAGTGGTTGTCAAAGGCTGGTTGTGTTTCTCTCTTCTA
ATCAACGAAGCATGAACCAGCACCGACCTCGCTTTCCTGCTGCAAGGTGG
TGTGGTAGGTGTGCAAAAGTACGGTCCGGCGCATGAAGGTGGGGGTAATC
TTGAGTTTAGCGTCATTAGCAAGGCTCCTGGTCGGTATGGTGCCTGCGGA
GGGAAGCATCAAACATGCAAATAGCACTTGTGTCTCCGGGGTAAACTCCG
AGAGTGGGTTAGGGTTAGGGTTAGGGTTACGTACGTAGTCTAAGTTGTCC
AAGTCACGTAATCTCTTGTGCAACAATCATGTCGCACATTGACGCGTGTG
TCAACATGTCAACAAGCCTGAAAGCACAGAGGGCGTTGCTGGCAATACAT
GAACTCGACGAGCCTGTTGACTTCTGCGCGAAAAGAATGAGGCATGCGTG
TACACGTACACTGAGAGCATTCTAAGGTCCGCTACTGCTGAGTGAGCAGT
TCAGGCGGCACGTTGCGCCGTGGTATTTCAATCCTCCTGGTAGCTCGTGT
TGGTTCATGTTTCATACGGATGGGAAGGCGGTGCGCTCTGGTGTGGGTAA
TCAATATCACAGAAGCCACCACCTTCGTTTGCTATCGTACTGGGTCTCGG
TTTCGAAAATGCCAAGCCATGTCCCCCCACCCCTCATGTATGTCCGCAAG
CACAAGCTACAAGCCAGCAGTAGCGGCTTCCCTTTTCGTATCTTCGCAAA
TCCCACGCCTTCCCCTCCCCACTCCACAACTGCTGTGGCCGCTCTCGCGC
GCACCTCCCGCCCCCGTTTGATTTCCAGCTACGCTCGGCCCAGCGTGCTT
TATCCTCAGCTGCGGCAGCAGGCCGGAGGGGTGGAGGGGGAAAGTAGTAG
GGGAGGGCGAAATACGGTACACAGTAGCGTAGGAGGGAATGTATTACGTG
CAGTCTGCGGGAAATAGCGGCGCGCCGCCGTCAATCCCAAACTTCTGGGA
TGCGTACCCATTACTAAGCGAAGGAGCTGGGGCCGGCGGCGGCGGCGGCG
GCGGGGCCGGCGGCAGCAGCGCGCGTTTGCTCCGCTGCTTTCTTTCGTTG
CCGTCCCCGTCCCCGTCCCCGTTGCCGTTGTCCCCGCCCTGCTCGACGAA
CGAGGATCGAGGCGTTCGACGGCGCCGTCGGGGCCGGAACAACGCCAACA
ACAAGCGCATGGTCCATAGCGTCGGAGCGCGGGTACAGGTGGCCGGCAAT
AGCAGCGTCGGCAGCAGCGGCAGTGGTGCCCACGGAGCCGTCGCCGCCGC
CGCCGCGTCCTCCCCGGAGGTGCTCCCGGAGTGGCTGGGGGGGCTGGGGC
TGGACAAAGAGGAGGAGGAGGACTTAGTCGCAGCTTTTGCTGCCCTGCCA
GAGCCGCCACCACCGGCTGCCGCTGATGCGAAACTTGTAAAGGCGGCGAG
AGATCTGGTGGTGTCCATGAAGAAGCCGAAGCGAGCGGCGGGGGGGGCGG
CGGGGGGCGGGGGCCGGGGCGGGGGCCGGGGCGGGGTTGTTGCCGAAGAC
GGGGATAGTGGTTGGGGCCAAGAAAAAAAAAGGCACGAGGGAGCAAGCGA
AGAAGGCAAGATTACCACCGTTGAGAGCGCAAAACGGTCTTCTGGAAGTC
AGGAAAGGGAAGGAAGAGGAGAAGCTGGAGACGGAGGACGGGGGTTGGGC
AGAGGTGACGGTCGCGCCGGCGGGGGAGGAGGCCAGAGGTTCGTTGGAGG
CCGACGAGGCGGAGCCGGTGGACGCCACGAAGCAGGCAAAGCCGTTGGCG
GAGGAGGAAGCGGTGGCGAGGGATGTGTGGATGCAGCAACGCCTGGGTCT
GGACGATGACGCGATGGCCATCATGAGGGAGACCCATATGCATGTATGTT
ACTCTTCTGTTGTTCTGTTAAGCTAGTCCCGGTCATGTGAAAACCTGCGG
GTGTCAAGTAGCTCGGGGAGCGAACATTTTTTTCTTTGTTGTTTTCGGAA
GTTTCTTCGGAAACGATTGTTCAAGCTGGTTGCGGGAATTGCGGTTACCG
GCCACCGCGGTAACACCTTGGTAATTGATAACTGGCAACTGGCCATCACG
TTCGCTCCAGTGCGGTAACTTTATCAACACGATGCTTTAGCTACGACGCT
TGGAGTAAAAGGGGGCATTTCCCGGGCTCCCTTTCCTGAAGTATTTATTG
CCTACCAGTGAGTAGATGGATTGACGGCTATGCAACAAGCTGGATTGGCC
CAACCAAGCAGAGTGCCACAAGCTGCCGCTTGTCGGGCGCGGCCGGCGAG
AGGCTTGCATCTTGCACGCATGTTCTCGTGCAGACAACCGATGGCAGCCT
CGGCAACTTGCTTGCCCCCGTTTTTTACGCATCTCGCTGTCGTCTCTTCG
CCGCAACTAATTCCCGTTGTCGCAACGACGTACCCGGCCGGCCGTCGAAA
ACAGGTTCTCAAGTACCGGGACAGGGAACACCTGGAGCCCAAGCTGGACT
GGCTGCAGAAGGAGCTGGACCTGGACGCCCAGGCCCTGGGCAAGATAGTC
TCGAGCGCGCCGGCGATCCTGAGGCTCAGCATCGAGGGGAGCATCAAGCC
GAAGCTGGGGTGGGTGAGGACCACGCTGGGCCTCGACAGGAGGGCCACGG
CGAAGCTGATGGTGTCGTGGCCGAGCCTGTTCAACATCCACGTGGCGACG
CTGGAGAAGAAGATCGACTTCTTGCGGGGGGAGGAGGTCAACCTGACCAC
GGTGAGCGAGCGAAAGGCGGGGCAGGGCAGGGCAGGCGGGCACGCTGGTC
CCAAAACCGTAGATTGTTTGATCTGTTGATCGGGCAAGTGTCTAAATAGG
ACCAAGGTTTTTTTTGAGTAGCCCAAATAGCAACACGTTCAAGCAGCTCG
AAGTGACATCTTGAAGTAACGCGTGCTCGGTTTTCTAAGAAGCTCAGTGT
TTCAACTTTTTCTTTTGTCGCAGCATGTTTTCTTTAGATGTACTGGTACA
TGCCACGCAACGCTCTTGTTTCAGCTGTTGCAAATCGTGTGGAACCGTAT
GGCACGCGCCTCAGGTCGAGATTAAGCGCATTGTGAGGAACTCGCCGGCC
ATTCTCACCTTTAGCATCGACGAGAACATGCGTCCCAAGCTTGAATGGCT
GCGAGAGCGGATGGGGCTGGACGGCGATGGTATCCGGAAGATGCTGGGGC
AAAACGCTCGCGTTCTGTCGCTCAAGGTATGGATCTAAGTCCAGCGCCTG
TTGATTTGGTGCCGCACCTATTGCTTCTGTCCCTCTCTCTCTCCCCCCCT
CTCTCCCTCTTTCCGTCTCCTTTGCGTGTTGTTGCCACTGTAGGTCACAT
GACGAACTTGGAAGTTCGAGACTCGTCTTCAGCTGGCACAGGCTTGCGTT
TCCTCCTTTTTCCCCCCCTCGAAAGCTTTCATCTCCACCGGTGACATCTA
AATTACAGCGTAGCCTCGACGCACCACAATCTATCATGTCCCAAGTTTTT
TTGCCGAACCAAGCTTGGCGCTTGTGGCTTGCTTGCTGCAACCCCTCGTA
CGTGGTTTTACACGCGCTGCTGGGTTTTGTGCAGGTTCGTTATTCTAGCA
TCAGACAGAGATGCCGACGTCCCCCACGTGAGACACCACGCATTTTGTTT
TGTTTTTGTTTTGTTTTGTTTTATTTCGCTCTCACTGCGAGCGTACGACA
TCCCCCGCTAAAACAACCTTTTTTGACGCGCGCAGGCCGAAACTATTGAA
GGGAAGCTGATGTGGCTGGAGGGCCGGCTGGGCATGGACAGGGAGAAGGC
CGCCAAGGTGGTCTTGACCTTTCCTGTGATGCTCTCCATGGCGCTGAACA
CCATGGACTGGAAGATCGTGTGGCTGCAGCAACGCCTCAGCCTGACCCGC
GACCAGATGATGGCCATGGTGGTCAAGTACCCTAACCTCCTGTCGTACAA
CATCGAGGACAACTTGGAGCCGACCCTCAAGTGGCTGGAGGAGGACCTGG
GGGTGGACACGGCCGTCGCGGGGAAGCTCGTTTTGCGCCAGCCGCGGCTC
CTTAGCGCCAACCTCGAGGACAACTTGAAGAACAAGGTGCGCACTTTGAG
TGATGGAGGCAGTTGTTGGAGATTGGGTATCGAATATCGATACGTTTTCG
ATCATTATTGGCAATACGCTGTATTGATATCGCCGGTTTTCACACCGATA
TTCTCGATACGAATCGGTATCGGGTATCGATATCGGTATTCGATATTCCG
ATTCTGTTGGGGGGGGGTCGGTTCCAAGCTGCCGACCCCCTTTTTTTTCG
AATGTTTTTGCAGCCCACAGCCCACCACTGCAACACGCTTTTGATTCAGA
GGGAGTGTTGAGCAACAGCGACGTGCGGGGGTCGTCGTTAAGTTGACTTG
AGGTTGCGAGCACTGCTGCGAAAACAGCTGTCCACGGTGTTTGATCATTT
TATTTCCTTTTTTCATGTTTGTTTTTGGTCGCAGCAAAGCTTCTTGGTTT
TTGTTAGGTGTCGGTGTTATTTGGTTATGTGTTATGTGGTTATGCATCTA
GAGTTGGCACTTGAAGTACATTGTTGGGTTGTTGAGCGTACTACACAAAC
TGTCAGCGGACGTTTCTACCTTCACTATGTTTTTGTTTTTGTTGGGAGGT
TCTACTGTTTCTACTACATACAGAAGTAGCATTCAATAAAACGAGCGCTC
ATTTATTACATTGTTTGTGCATGTTGCGAAATTTGGCGCCTTTTATAAGC
TTTCTAGCGCAGAGCGCAGGGCTGAGCCCATTCTATCGAAACAGCCACGC
TACGCACCACACCCGGCCGTCCTAGTTCGTTCGTCCACAAGTTTGACTAG
TTTGACTAGAAGACGGCAACATCTTGACACGCCTCCTGCTGCTGTATCAC
TGCTGTATCATCATGTGTGCTGGAGCGCACACGTGTGCACTGCTGTGCAC
TGCTGTAAAGGGTACACTCAGCACTGGGGTGAGGTTGTTGGTTGCCGCGT
GTCAGCGTGCCGCTCGGTCTTGCACTCTGCGGCCCTTTCAAAACAGCCGT
ATTGTATCGAGTATCGATACCCGATTCGAATCGAACTTTTTTTCGAGTAT
CATATCGAAAAAAACATCGATATCGAGGGTTTTCTGTCGATATTTTGTTT
TGAATTATCGAAAAAAAAATCCGGACCAATCTCCAACACTGGATAGAAGA
CTTGATAGGATGAGCTTGTTTACACACGGCGGTTGAGATCCTCTTGCGCG
GAGTGGCGTGCGAATAGGCTCACAAAAGGGCAACCTCTCTTGAATCCGAA
AACATGCACACACGAATATATCGACCAACATTTATTGTGTGCGTTTTGAA
AAGAACGCTACAGGACGCGTACCACCGAAAGCTCAACAAGCACAATTTTT
GGCGTGGCCGCCGCGACCCCGTTGGCGCAACATTCGCATGCGGATGATTG
TCGTTTCTTACACCAGACCCGTTCCAATCCCCCCCCGCGAAATCGATATC
ATCCCCGCGCGACACATGAAGGTGCCCTGGATGATGCAGAACCTCAACCT
TCCGAGAGACGTGGTGCTGGAGGTCATCACGGGCTGCCCGGACGTGCTCA
ACCTGAGCACGGAGAGAAACCTGGGGCCGACGATCCAGTTCTTCTACGAC
GAGATGGGCGCCTCGAAGGACGAGGTGTCGGAGATGGTGGCCGCCAGCGG
GAAGCCTCTCATGTACAGCCTGGAGAAGCGGTGGAGGGCCCGCGTGGCGA
GGATAAGGGCGAGGGGCGTGACGCCGTGCTTCGGAGATCACTGGAAGCCT
ATCGCGAATCGGACTCCGGCCAAGTTCGATGACTGGCTGGAGACGTTGTA
GCGACTTCGAGGGGCGGCCACGCGTTCGGCTGCCTGCACACCGGTCGTAG
GAGTGGCATTGCAGGTCTCATAGATGTGTAGCTTTCCCGTTAGCGGAGCT
GTCGGCGAGGTTTGTTCTTTTTTTGAGCGACTGATAGGGTCGGGTTTTGT
TGCGTTGAGCCCCGGAGCTCGTGTTGGCCACAGAAAAGTAGTGGGCGTAT
ATAAGATGGATGGGGGAACAGGGTCGGTCAGTTAGACCAGTCCGTCATGC
AGCAGCAGTCCCTGTGTTGGAAGGGAGAGGAGGGTATAGAACAGTTCTTC
TTCAGAGAGAATATTGTACAGTTTTGTGGGGGGGCGGGGGGTGTCAAGTT
TTGTGGCCCGGACGTTGTGTATCGTGGATCACATGTGGTGGGAGGAACGT
GAGGTTCGTTGGAGCAGATAAATTACACATATTTTTGCTTTGGTGTGCCT
ATCTCCGTGGCGTTCATGACTGCTGTACGCGCGAAAAATGTGAAAGATTT
CAGAAAGTCGAACCAGTGATGTTGCAGTGTTCCAGTACTACGGCGGTACA
CCAGCTTACGCCTGCTGTTGAAGAGGCAAGCTCCGGAGCCGTTGAACCAG
AACAGGAGCGTACATTTGGGTGTAAGGCCAACTCTTATGAGATTGGGAAA
GTCGGTGGGAATTGCTTTAACGCCTGGTTCCCACTGAAACCCTCACGCAG
TTAGGAAAATTGTGCTTAGCTGGCCGGTTGCCACACAAGCCACCTAGAGC
CACGCTGCTTAGTGGCGCTCAGTAGCATGGGCCTACTGTCCTCAAGATTA
GAGATAAATCCGTGAGCAGGAGAGCAAGCAATCGTTATGGGTGTGGGTGT
TTCGGCCCATTGCGCCCTTTCTCGCACTGCTCAGAAAACCGTTCTCCGG
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Coding sequence (CDS) from alignment at C-linearis_contig9:2380083..2386931+

>mRNA_C-linearis_contig9.16652.1 ID=mRNA_C-linearis_contig9.16652.1|Name=mRNA_C-linearis_contig9.16652.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3990bp|location=Sequence derived from alignment at C-linearis_contig9:2380083..2386931+ (Chordaria linearis ClinC8C monoicous)
ATGTATTACGTGCAGTCTGCGGGAAATAGCGGCGCGCCGCCGTCAATCCC
AAACTTCTGGGATGCGTACCCATTACTAAGCGAAGGAGCTGGGGCCGGCG
GCGGCGGCGGCGGCGGGGCCGGCGGCAGCAGCGCGCGTTTGCTCCGCTGC
TTTCTTTCGTTGCCGTCCCCGTCCCCGTCCCCGTTGCCGTTGTCCCCGCC
CTGCTCGACGAACGAGGATCGAGGCGTTCGACGGCGCCGTCGGGGCCGGA
ACAACGCCAACAACAAGCGCATGGTCCATAGCGTCGGAGCGCGGGTACAG
GTGGCCGGCAATAGCAGCGTCGGCAGCAGCGGCAGTGGTGCCCACGGAGC
CGTCGCCGCCGCCGCCGCGTCCTCCCCGGAGGTGCTCCCGGAGTGGCTGG
GGGGGCTGGGGCTGGACAAAGAGGAGGAGGAGGACTTAGTCGCAGCTTTT
GCTGCCCTGCCAGAGCCGCCACCACCGGCTGCCGCTGATGCGAAACTTGT
AAAGGCGGCGAGAGATCTGGTGGTGTCCATGAAGAAGCCGAAGCGAGCGG
CGGGGGGGGCGGCGGGGGGCGGGGGCCGGGGCGGGGGCCGGGGCGGGGTT
GTTGCCGAAGACGGGGATAGTGGTTGGGGCCAAGAAAAAAAAAGGCACGA
GGGAGCAAGCGAAGAAGGCAAGATTACCACCGTTGAGAGCGCAAAACGGT
CTTCTGGAAGTCAGGAAAGGGAAGGAAGAGGAGAAGCTGGAGACGGAGGA
CGGGGGTTGGGCAGAGGTGACGATGTATTACGTGCAGTCTGCGGGAAATA
GCGGCGCGCCGCCGTCAATCCCAAACTTCTGGGATGCGTACCCATTACTA
AGCGAAGGAGCTGGGGCCGGCGGCGGCGGCGGCGGCGGGGCCGGCGGCAG
CAGCGCGCGTTTGCTCCGCTGCTTTCTTTCGTTGCCGTCCCCGTCCCCGT
CCCCGTTGCCGTTGTCCCCGCCCTGCTCGACGAACGAGGATCGAGGCGTT
CGACGGCGCCGTCGGGGCCGGAACAACGCCAACAACAAGCGCATGGTCCA
TAGCGTCGGAGCGCGGGTACAGGTGGCCGGCAATAGCAGCGTCGGCAGCA
GCGGCAGTGGTGCCCACGGAGCCGTCGCCGCCGCCGCCGCGTCCTCCCCG
GAGGTGCTCCCGGAGTGGCTGGGGGGGCTGGGGCTGGACAAAGAGGAGGA
GGAGGACTTAGTCGCAGCTTTTGCTGCCCTGCCAGAGCCGCCACCACCGG
CTGCCGCTGATGCGAAACTTGTAAAGGCGGCGAGAGATCTGGTGGTGTCC
ATGAAGAAGCCGAAGCGAGCGGCGGGGGGGGCGGCGGGGGGCGGGGGCCG
GGGCGGGGGCCGGGGCGGGGTTGTTGCCGAAGACGGGGATAGTGGTTGGG
GCCAAGAAAAAAAAAGGCACGAGGGAGCAAGCGAAGAAGGCAAGATTACC
ACCGTTGAGAGCGCAAAACGGTCTTCTGGAAGTCAGGAAAGGGAAGGAAG
AGGAGAAGCTGGAGACGGAGGACGGGGGTTGGGCAGAGGTGACGCGGTGG
CGAGGGATGTGTGGATGCAGCAACGCCTGGGTCTGGACGATGACGCGATG
GCCATCATGAGGGAGACCCATATGCATCGGTGGCGAGGGATGTGTGGATG
CAGCAACGCCTGGGTCTGGACGATGACGCGATGGCCATCATGAGGGAGAC
CCATATGCATGTTCTCAAGTACCGGGACAGGGAACACCTGGAGCCCAAGC
TGGACTGGCTGCAGAAGGAGCTGGACCTGGACGCCCAGGCCCTGGGCAAG
ATAGTCTCGAGCGCGCCGGCGATCCTGAGGCTCAGCATCGAGGGGAGCAT
CAAGCCGAAGCTGGGGTGGGTGAGGACCACGCTGGGCCTCGACAGGAGGG
CCACGGCGAAGCTGATGGTGTCGTGGCCGAGCCTGTTCAACATCCACGTG
GCGACGCTGGAGAAGAAGATCGACTTCTTGCGGGGGGAGGAGGTCAACCT
GACCACGGTTCTCAAGTACCGGGACAGGGAACACCTGGAGCCCAAGCTGG
ACTGGCTGCAGAAGGAGCTGGACCTGGACGCCCAGGCCCTGGGCAAGATA
GTCTCGAGCGCGCCGGCGATCCTGAGGCTCAGCATCGAGGGGAGCATCAA
GCCGAAGCTGGGGTGGGTGAGGACCACGCTGGGCCTCGACAGGAGGGCCA
CGGCGAAGCTGATGGTGTCGTGGCCGAGCCTGTTCAACATCCACGTGGCG
ACGCTGGAGAAGAAGATCGACTTCTTGCGGGGGGAGGAGGTCAACCTGAC
CACGGTCGAGATTAAGCGCATTGTGAGGAACTCGCCGGCCATTCTCACCT
TTAGCATCGACGAGAACATGCGTCCCAAGCTTGAATGGCTGCGAGAGCGG
ATGGGGCTGGACGGCGATGGTATCCGGAAGATGCTGGGGCAAAACGCTCG
CGTTCTGTCGCTCAAGGTCGAGATTAAGCGCATTGTGAGGAACTCGCCGG
CCATTCTCACCTTTAGCATCGACGAGAACATGCGTCCCAAGCTTGAATGG
CTGCGAGAGCGGATGGGGCTGGACGGCGATGGTATCCGGAAGATGCTGGG
GCAAAACGCTCGCGTTCTGTCGCTCAAGGCCGAAACTATTGAAGGGAAGC
TGATGTGGCTGGAGGGCCGGCTGGGCATGGACAGGGAGAAGGCCGCCAAG
GTGGTCTTGACCTTTCCTGTGATGCTCTCCATGGCGCTGAACACCATGGA
CTGGAAGATCGTGTGGCTGCAGCAACGCCTCAGCCTGACCCGCGACCAGA
TGATGGCCATGGTGGTCAAGTACCCTAACCTCCTGTCGTACAACATCGAG
GACAACTTGGAGCCGACCCTCAAGTGGCTGGAGGAGGACCTGGGGGTGGA
CACGGCCGTCGCGGGGAAGCTCGTTTTGCGCCAGCCGCGGCTCCTTAGCG
CCAACCTCGAGGACAACTTGAAGAACAAGGCCGAAACTATTGAAGGGAAG
CTGATGTGGCTGGAGGGCCGGCTGGGCATGGACAGGGAGAAGGCCGCCAA
GGTGGTCTTGACCTTTCCTGTGATGCTCTCCATGGCGCTGAACACCATGG
ACTGGAAGATCGTGTGGCTGCAGCAACGCCTCAGCCTGACCCGCGACCAG
ATGATGGCCATGGTGGTCAAGTACCCTAACCTCCTGTCGTACAACATCGA
GGACAACTTGGAGCCGACCCTCAAGTGGCTGGAGGAGGACCTGGGGGTGG
ACACGGCCGTCGCGGGGAAGCTCGTTTTGCGCCAGCCGCGGCTCCTTAGC
GCCAACCTCGAGGACAACTTGAAGAACAAGGTGCCCTGGATGATGCAGAA
CCTCAACCTTCCGAGAGACGTGGTGCTGGAGGTCATCACGGGCTGCCCGG
ACGTGCTCAACCTGAGCACGGAGAGAAACCTGGGGCCGACGATCCAGTTC
TTCTACGACGAGATGGGCGCCTCGAAGGACGAGGTGTCGGAGATGGTGGC
CGCCAGCGGGAAGCCTCTCATGTACAGCCTGGAGAAGCGGTGGAGGGCCC
GCGTGGCGAGGATAAGGGCGAGGGGCGTGACGCCGTGCTTCGGAGATCAC
TGGAAGCCTATCGCGAATCGGACTCCGGCCAAGTTCGATGACTGGCTGGA
GACGTTGTAGGTGCCCTGGATGATGCAGAACCTCAACCTTCCGAGAGACG
TGGTGCTGGAGGTCATCACGGGCTGCCCGGACGTGCTCAACCTGAGCACG
GAGAGAAACCTGGGGCCGACGATCCAGTTCTTCTACGACGAGATGGGCGC
CTCGAAGGACGAGGTGTCGGAGATGGTGGCCGCCAGCGGGAAGCCTCTCA
TGTACAGCCTGGAGAAGCGGTGGAGGGCCCGCGTGGCGAGGATAAGGGCG
AGGGGCGTGACGCCGTGCTTCGGAGATCACTGGAAGCCTATCGCGAATCG
GACTCCGGCCAAGTTCGATGACTGGCTGGAGACGTTGTAG
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