mRNA_C-linearis_contig9.16633.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: D7FSS5_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS5_ECTSI) HSP 1 Score: 474 bits (1219), Expect = 4.110e-165 Identity = 246/348 (70.69%), Postives = 278/348 (79.89%), Query Frame = 1
Query: 10 ELRRRPAAVRRNEAPAISPHP------EPPV-AVAKSSGCPIQIKSGTYHYVRKAVVILFPAYILCCMFEVLDPPRPMAENAWDSLMQALGNGPRIFSAAELKAKGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGP---RREGGGVAKQLGAGAGAAGEGGE-EPSRDALKVKGRCSCYDLDYATANEERLLSYGGCAPDSNSCVTKPPEAP 1020
ELRRRP +R N + +P P PPV A KSSGCPIQ+KSGTY+YVRKAVVILFPAYILCCMF VL+PPRPMAE+ WD+ M ALG GPR+FSAAELKAKG GSRPMLSILGEVFDVSKGAKHYGKGGAYE FTGKDASRSFVSG+F+EAGLTD LSGLEPS+CLGIKDW +FY+ +YKK+GLLAGRFYD GK T++L F +C RKG K+KE EA EK LYP CNSRW+A EGGRVWCED KKVPRK AP+ VHGA IR++G + + G + A G +G GE E S DA KVKGRCSC+D+DYA ANE RLLSYGGCAP+SNSC+TKPPEAP
Sbjct: 3 ELRRRP--MRGNSDASAAPGPGSTAAVPPPVDAPKKSSGCPIQVKSGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRVFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSKCLGIKDWHEFYQNHEQYKKRGLLAGRFYDANGKPTRELAPFHKCPRKGTKEKEREAAEKLLYPSCNSRWSAPEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGSSQPKSGATTQAAEAAGGGSGLSGEAEASTDAAKVKGRCSCFDVDYAKANEHRLLSYGGCAPESNSCMTKPPEAP 348
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A6H5LMN7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMN7_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 1.090e-138 Identity = 215/295 (72.88%), Postives = 236/295 (80.00%), Query Frame = 1
Query: 70 PEPPVAVAKSSGCPIQIKSGTYHYVRKAVVILFPAYILCCMFEVLDPPRPMAENAWDSLMQALGNGPRIFSAAELKAKGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQ--EGPRREGGGVAKQLG-AGAGAAGEGGE-EPSRDALKV-----KGRCSCYDL 927
P P A KSSGCPIQ+KSGTY+YVRKAVVILFPAYILCCMF VL+PPRPMAE+ WD+ M ALG GPRIFSAAELKAKG GSRPMLSILGEVFDVSKGAKHYGKGGAYE FTGKDASRSFVSG+F+EAGLTD LSGLEPS+CLGIKDW +FY+ YKK+GLLAGRFYD G+ T++L F +CARKG K+KE EA EK LYP CNSRW+AAEGGRVWCED KKVPRK AP+ VHGA IR+ EG + GVAKQ A G +G GGE E SRDA KV KGR S L
Sbjct: 28 PPPAGAPKKSSGCPIQVKSGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRIFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSECLGIKDWHEFYQSHELYKKRGLLAGRFYDANGEPTRELAAFHKCARKGAKEKEREAAEKLLYPSCNSRWSAAEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGKSQPESGVAKQAAEAAGGGSGVGGEAEASRDAAKVCCAWVKGRSSLRSL 322
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A7J5ZTI6_AMEME (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J5ZTI6_AMEME) HSP 1 Score: 157 bits (396), Expect = 2.170e-42 Identity = 96/227 (42.29%), Postives = 119/227 (52.42%), Query Frame = 1
Query: 325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQL-GAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
L+ILG+VFDV KG KHYG G Y FTG+DAS +FV+GDF+EAGLTD +S L PSQ + + DW FY+KD Y + G L GRFY GK T LK E +G K K +E +LYP CNS W + GGRVWC +I+ G R+ GV + L G+G A RC C LD T +N L Y C P + SC+
Sbjct: 57 LAILGQVFDVEKGRKHYGPDGGYRFFTGRDASSAFVTGDFTEAGLTDDVSDLSPSQIVALYDWLAFYQKD--YTRIGKLIGRFYSESGKPTDVLKQVEASLAQGLKQKAQAEKENELYPACNSEWRSDRGGRVWC------------------SIKSGGVHRDWAGVPRMLFSPGSGQA----------------RCVCVRLDDRTQSNNPNLQQYKDCPPQAESCL 247
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A5N5JXW0_PANHP (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5JXW0_PANHP) HSP 1 Score: 155 bits (393), Expect = 6.360e-42 Identity = 94/226 (41.59%), Postives = 117/226 (51.77%), Query Frame = 1
Query: 325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
L+ILG+VFDV KG KHYG GG Y FTG+DASR+FV+GDF+EAGLTD +S L PSQ + + DW FY+KD Y G L GRFY GK T L+ E +G K K +E +LYP CNS W++ GGRVWC + + G R+ GV + L P RC C LD T +N L Y C P + SC+
Sbjct: 59 LAILGQVFDVEKGRKHYGPGGGYRFFTGRDASRAFVTGDFTEAGLTDDVSDLSPSQIVALYDWLAFYQKD--YTHVGRLIGRFYSESGKPTDVLQQVEASLAQGLKLKAQAEKENELYPACNSEWSSDRGGRVWC------------------STKSGGVHRDWAGVPRML-----------FSPGSGQT----RCVCVRLDDPTHSNNPNLQEYKDCPPQAESCL 249
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A1I9VZF2_PETMA (Neuferricin n=3 Tax=Petromyzon marinus TaxID=7757 RepID=A0A1I9VZF2_PETMA) HSP 1 Score: 156 bits (394), Expect = 9.130e-42 Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWC 729
L++LG+VFDVSKGAKHYG G +Y+ G+DASR+FVSGDFS+AGL D +SGL P+Q LG+ DW FY++D Y G L GRFYD +G+ T+ L++ E G K KE + +K+ +P CNS W+AA G RVWC
Sbjct: 73 LAVLGQVFDVSKGAKHYGPGASYQALAGRDASRAFVSGDFSDAGLVDDVSGLSPAQMLGLHDWLSFYQRDYAYV--GKLVGRFYDEQGRPTEALREVEEALALGHKAKEEKELQKRRFPPCNSEWSAASGSRVWC 205
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A6J2WWN4_CHACN (neuferricin n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WWN4_CHACN) HSP 1 Score: 154 bits (390), Expect = 2.200e-41 Identity = 105/285 (36.84%), Postives = 143/285 (50.18%), Query Frame = 1
Query: 154 VVILFPAYILCCMFEVLDPPRPMAE-NAWDSLMQALGNGPRIFSAAELKAKGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQL-GAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
V +L Y ++ L RPM + +A D+ + L E +KG+ L+ILG+VFDV KG KHYG GG Y F+G+DASR+FV+GDF+EAGLTD L+ L PSQ + + DW FY++D Y G L GRFY+ G+ ++ LK E +G K K + +LYP CNS W++A GGRVWC + + G R+ GV + L G+G + RC C LD T + L Y C P S SC+
Sbjct: 13 VAVLTVPYEWLTLYGALSLFRPMEQQSASDAPARLLTQTELALYNGEENSKGL----YLAILGQVFDVEKGRKHYGPGGGYRFFSGRDASRAFVTGDFTEAGLTDDLTDLSPSQIVALYDWLAFYQRD--YTPAGRLIGRFYNEAGQPSETLKQVESLLSEGLKLKAQTEAQNQLYPACNSEWSSANGGRVWC------------------STKSGGVNRDWTGVPRMLFSPGSG----------------QSRCVCVRLDDPTHSGNANLREYEDCPPLSESCL 257
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A3P9MHI7_ORYLA (Cytochrome b5 domain containing 2 n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9MHI7_ORYLA) HSP 1 Score: 153 bits (387), Expect = 4.270e-41 Identity = 96/233 (41.20%), Postives = 119/233 (51.07%), Query Frame = 1
Query: 304 GVGSRPM-LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYATANEERLLSYGGCAPDSNSCV 999
G GSR + L ILG+VFDV KG KHYG GGAY GKDAS +F++GDFSE GLTD +S L P Q + + DW FY K+ YK G + GRFYD GK TK L +GQ+ K EK YP CNS W+AA GGRVWC + + G RE GV ++ P + RC C + D +A + L Y GC P ++SC
Sbjct: 48 GAGSRGLYLVILGQVFDVHKGYKHYGPGGAYHFMAGKDASLAFITGDFSEKGLTDDVSSLSPLQVVALYDWLAFYHKE--YKTVGTVTGRFYDESGKPTKALLQVRASLAEGQRIKAQSEAEKAHYPACNSEWSAARGGRVWC------------------STKSGGVIREWAGVPRKR-----------FSPGSSGV----RCVCVE-DPFSAEDPSLQEYDGCPPHADSCT 244
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A672FEF3_SALFA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FEF3_SALFA) HSP 1 Score: 153 bits (387), Expect = 4.640e-41 Identity = 91/238 (38.24%), Postives = 120/238 (50.42%), Query Frame = 1
Query: 310 GSRPM-LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCE--------DPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYATANEERLLSYGGCAPDSNSC 996
GSR + L++LG+VFDV+KG KHYG GGAY G+DAS SF++GDFSE GLTD +SGL P Q + + DW FY+++ Y+ G++ GRFY G+ T+ L E +GQ+ K EK YP CNS W++A+GGRVWC D VPRK HG RC C + YA + L Y GC+P ++SC
Sbjct: 53 GSRGLYLALLGQVFDVNKGHKHYGPGGAYHFMAGRDASCSFITGDFSEGGLTDDVSGLSPVQVVALYDWLAFYQRE--YQTVGVVIGRFYSTSGQPTEALLRVEASRAEGQRIKARAEAEKMRYPACNSEWSSAKGGRVWCSTKSGGVVRDWTGVPRKRFSARSHGV-----------------------------------------RCVCVEDPYAAEEDPNLQRYDGCSPHADSC 247
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A4W4FWL0_ELEEL (Neuferricin n=2 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4FWL0_ELEEL) HSP 1 Score: 153 bits (387), Expect = 5.040e-41 Identity = 93/227 (40.97%), Postives = 124/227 (54.63%), Query Frame = 1
Query: 325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQL-GAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
L+ILG+VFDV KG KHYG G Y F+G+DASR+FV+GDFSEAGL+D +S L PSQ + + DW FYEK+ Y G L GRFY +G+ T+ L+ E +G K K EE ++YP CNS W++A GGRVWC + + G R+ GV + L +G+G + RC C LD T +N L Y C P ++SC+
Sbjct: 60 LAILGQVFDVEKGRKHYGPDGGYRFFSGRDASRAFVTGDFSEAGLSDDVSDLSPSQIVALYDWLTFYEKE--YTPVGRLIGRFYTERGEPTEALQQAEAHLTEGLKLKAQAEEENRVYPACNSEWSSAAGGRVWCSE------------------KSGGVHRDWTGVPRMLFSSGSG----------------RTRCVCVRLDDRTCSNNPHLRQYKDCPPHADSCL 250
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: UPI000F50F982 (neuferricin n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F50F982) HSP 1 Score: 152 bits (385), Expect = 8.920e-41 Identity = 92/226 (40.71%), Postives = 117/226 (51.77%), Query Frame = 1
Query: 325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
L+ILG+VFDV KG KHYG G+Y FTG+DASR+FV+G+F++AGLTD +S L PSQ + + DW FY+KD Y G L GRFY GK T L+ E +G K K E+ KLYP CNS W + GGRVWC + + G R+ GV + L P RC C LD T +N L Y C+P + SC+
Sbjct: 59 LAILGQVFDVEKGRKHYGPAGSYRFFTGRDASRAFVTGEFTDAGLTDDVSDLSPSQVVALYDWLAFYQKD--YTPVGKLIGRFYSKSGKPTSVLQKLEASLAQGLKLKAQAEEQNKLYPACNSEWNSDRGGRVWC------------------STKSGGVHRDWAGVPRML-----------FSPGSGHT----RCVCVRLDDPTQSNNPNLQEYKDCSPQAESCL 249 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16633.1 >prot_C-linearis_contig9.16633.1 ID=prot_C-linearis_contig9.16633.1|Name=mRNA_C-linearis_contig9.16633.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=349bp MAPELRRRPAAVRRNEAPAISPHPEPPVAVAKSSGCPIQIKSGTYHYVRKback to top mRNA from alignment at C-linearis_contig9:2174925..2178681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16633.1 ID=mRNA_C-linearis_contig9.16633.1|Name=mRNA_C-linearis_contig9.16633.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3757bp|location=Sequence derived from alignment at C-linearis_contig9:2174925..2178681- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:2174925..2178681- >mRNA_C-linearis_contig9.16633.1 ID=mRNA_C-linearis_contig9.16633.1|Name=mRNA_C-linearis_contig9.16633.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at C-linearis_contig9:2174925..2178681- (Chordaria linearis ClinC8C monoicous)back to top |