mRNA_C-linearis_contig9.16633.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16633.1
Unique NamemRNA_C-linearis_contig9.16633.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: D7FSS5_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS5_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 4.110e-165
Identity = 246/348 (70.69%), Postives = 278/348 (79.89%), Query Frame = 1
Query:   10 ELRRRPAAVRRNEAPAISPHP------EPPV-AVAKSSGCPIQIKSGTYHYVRKAVVILFPAYILCCMFEVLDPPRPMAENAWDSLMQALGNGPRIFSAAELKAKGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGP---RREGGGVAKQLGAGAGAAGEGGE-EPSRDALKVKGRCSCYDLDYATANEERLLSYGGCAPDSNSCVTKPPEAP 1020
            ELRRRP  +R N   + +P P       PPV A  KSSGCPIQ+KSGTY+YVRKAVVILFPAYILCCMF VL+PPRPMAE+ WD+ M ALG GPR+FSAAELKAKG GSRPMLSILGEVFDVSKGAKHYGKGGAYE FTGKDASRSFVSG+F+EAGLTD LSGLEPS+CLGIKDW +FY+   +YKK+GLLAGRFYD  GK T++L  F +C RKG K+KE EA EK LYP CNSRW+A EGGRVWCED KKVPRK AP+ VHGA IR++G    + + G   +   A  G +G  GE E S DA KVKGRCSC+D+DYA ANE RLLSYGGCAP+SNSC+TKPPEAP
Sbjct:    3 ELRRRP--MRGNSDASAAPGPGSTAAVPPPVDAPKKSSGCPIQVKSGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRVFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSKCLGIKDWHEFYQNHEQYKKRGLLAGRFYDANGKPTRELAPFHKCPRKGTKEKEREAAEKLLYPSCNSRWSAPEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGSSQPKSGATTQAAEAAGGGSGLSGEAEASTDAAKVKGRCSCFDVDYAKANEHRLLSYGGCAPESNSCMTKPPEAP 348          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A6H5LMN7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMN7_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.090e-138
Identity = 215/295 (72.88%), Postives = 236/295 (80.00%), Query Frame = 1
Query:   70 PEPPVAVAKSSGCPIQIKSGTYHYVRKAVVILFPAYILCCMFEVLDPPRPMAENAWDSLMQALGNGPRIFSAAELKAKGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQ--EGPRREGGGVAKQLG-AGAGAAGEGGE-EPSRDALKV-----KGRCSCYDL 927
            P P  A  KSSGCPIQ+KSGTY+YVRKAVVILFPAYILCCMF VL+PPRPMAE+ WD+ M ALG GPRIFSAAELKAKG GSRPMLSILGEVFDVSKGAKHYGKGGAYE FTGKDASRSFVSG+F+EAGLTD LSGLEPS+CLGIKDW +FY+    YKK+GLLAGRFYD  G+ T++L  F +CARKG K+KE EA EK LYP CNSRW+AAEGGRVWCED KKVPRK AP+ VHGA IR+  EG  +   GVAKQ   A  G +G GGE E SRDA KV     KGR S   L
Sbjct:   28 PPPAGAPKKSSGCPIQVKSGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRIFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSECLGIKDWHEFYQSHELYKKRGLLAGRFYDANGEPTRELAAFHKCARKGAKEKEREAAEKLLYPSCNSRWSAAEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGKSQPESGVAKQAAEAAGGGSGVGGEAEASRDAAKVCCAWVKGRSSLRSL 322          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A7J5ZTI6_AMEME (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J5ZTI6_AMEME)

HSP 1 Score: 157 bits (396), Expect = 2.170e-42
Identity = 96/227 (42.29%), Postives = 119/227 (52.42%), Query Frame = 1
Query:  325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQL-GAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
            L+ILG+VFDV KG KHYG  G Y  FTG+DAS +FV+GDF+EAGLTD +S L PSQ + + DW  FY+KD  Y + G L GRFY   GK T  LK  E    +G K K    +E +LYP CNS W +  GGRVWC                  +I+  G  R+  GV + L   G+G A                RC C  LD  T +N   L  Y  C P + SC+
Sbjct:   57 LAILGQVFDVEKGRKHYGPDGGYRFFTGRDASSAFVTGDFTEAGLTDDVSDLSPSQIVALYDWLAFYQKD--YTRIGKLIGRFYSESGKPTDVLKQVEASLAQGLKQKAQAEKENELYPACNSEWRSDRGGRVWC------------------SIKSGGVHRDWAGVPRMLFSPGSGQA----------------RCVCVRLDDRTQSNNPNLQQYKDCPPQAESCL 247          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A5N5JXW0_PANHP (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5JXW0_PANHP)

HSP 1 Score: 155 bits (393), Expect = 6.360e-42
Identity = 94/226 (41.59%), Postives = 117/226 (51.77%), Query Frame = 1
Query:  325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
            L+ILG+VFDV KG KHYG GG Y  FTG+DASR+FV+GDF+EAGLTD +S L PSQ + + DW  FY+KD  Y   G L GRFY   GK T  L+  E    +G K K    +E +LYP CNS W++  GGRVWC                  + +  G  R+  GV + L             P         RC C  LD  T +N   L  Y  C P + SC+
Sbjct:   59 LAILGQVFDVEKGRKHYGPGGGYRFFTGRDASRAFVTGDFTEAGLTDDVSDLSPSQIVALYDWLAFYQKD--YTHVGRLIGRFYSESGKPTDVLQQVEASLAQGLKLKAQAEKENELYPACNSEWSSDRGGRVWC------------------STKSGGVHRDWAGVPRML-----------FSPGSGQT----RCVCVRLDDPTHSNNPNLQEYKDCPPQAESCL 249          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A1I9VZF2_PETMA (Neuferricin n=3 Tax=Petromyzon marinus TaxID=7757 RepID=A0A1I9VZF2_PETMA)

HSP 1 Score: 156 bits (394), Expect = 9.130e-42
Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 1
Query:  325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWC 729
            L++LG+VFDVSKGAKHYG G +Y+   G+DASR+FVSGDFS+AGL D +SGL P+Q LG+ DW  FY++D  Y   G L GRFYD +G+ T+ L++ E     G K KE +  +K+ +P CNS W+AA G RVWC
Sbjct:   73 LAVLGQVFDVSKGAKHYGPGASYQALAGRDASRAFVSGDFSDAGLVDDVSGLSPAQMLGLHDWLSFYQRDYAYV--GKLVGRFYDEQGRPTEALREVEEALALGHKAKEEKELQKRRFPPCNSEWSAASGSRVWC 205          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A6J2WWN4_CHACN (neuferricin n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WWN4_CHACN)

HSP 1 Score: 154 bits (390), Expect = 2.200e-41
Identity = 105/285 (36.84%), Postives = 143/285 (50.18%), Query Frame = 1
Query:  154 VVILFPAYILCCMFEVLDPPRPMAE-NAWDSLMQALGNGPRIFSAAELKAKGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQL-GAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
            V +L   Y    ++  L   RPM + +A D+  + L          E  +KG+     L+ILG+VFDV KG KHYG GG Y  F+G+DASR+FV+GDF+EAGLTD L+ L PSQ + + DW  FY++D  Y   G L GRFY+  G+ ++ LK  E    +G K K     + +LYP CNS W++A GGRVWC                  + +  G  R+  GV + L   G+G                + RC C  LD  T +    L  Y  C P S SC+
Sbjct:   13 VAVLTVPYEWLTLYGALSLFRPMEQQSASDAPARLLTQTELALYNGEENSKGL----YLAILGQVFDVEKGRKHYGPGGGYRFFSGRDASRAFVTGDFTEAGLTDDLTDLSPSQIVALYDWLAFYQRD--YTPAGRLIGRFYNEAGQPSETLKQVESLLSEGLKLKAQTEAQNQLYPACNSEWSSANGGRVWC------------------STKSGGVNRDWTGVPRMLFSPGSG----------------QSRCVCVRLDDPTHSGNANLREYEDCPPLSESCL 257          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A3P9MHI7_ORYLA (Cytochrome b5 domain containing 2 n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9MHI7_ORYLA)

HSP 1 Score: 153 bits (387), Expect = 4.270e-41
Identity = 96/233 (41.20%), Postives = 119/233 (51.07%), Query Frame = 1
Query:  304 GVGSRPM-LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYATANEERLLSYGGCAPDSNSCV 999
            G GSR + L ILG+VFDV KG KHYG GGAY    GKDAS +F++GDFSE GLTD +S L P Q + + DW  FY K+  YK  G + GRFYD  GK TK L        +GQ+ K     EK  YP CNS W+AA GGRVWC                  + +  G  RE  GV ++              P    +    RC C + D  +A +  L  Y GC P ++SC 
Sbjct:   48 GAGSRGLYLVILGQVFDVHKGYKHYGPGGAYHFMAGKDASLAFITGDFSEKGLTDDVSSLSPLQVVALYDWLAFYHKE--YKTVGTVTGRFYDESGKPTKALLQVRASLAEGQRIKAQSEAEKAHYPACNSEWSAARGGRVWC------------------STKSGGVIREWAGVPRKR-----------FSPGSSGV----RCVCVE-DPFSAEDPSLQEYDGCPPHADSCT 244          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A672FEF3_SALFA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FEF3_SALFA)

HSP 1 Score: 153 bits (387), Expect = 4.640e-41
Identity = 91/238 (38.24%), Postives = 120/238 (50.42%), Query Frame = 1
Query:  310 GSRPM-LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCE--------DPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYATANEERLLSYGGCAPDSNSC 996
            GSR + L++LG+VFDV+KG KHYG GGAY    G+DAS SF++GDFSE GLTD +SGL P Q + + DW  FY+++  Y+  G++ GRFY   G+ T+ L   E    +GQ+ K     EK  YP CNS W++A+GGRVWC         D   VPRK      HG                                          RC C +  YA   +  L  Y GC+P ++SC
Sbjct:   53 GSRGLYLALLGQVFDVNKGHKHYGPGGAYHFMAGRDASCSFITGDFSEGGLTDDVSGLSPVQVVALYDWLAFYQRE--YQTVGVVIGRFYSTSGQPTEALLRVEASRAEGQRIKARAEAEKMRYPACNSEWSSAKGGRVWCSTKSGGVVRDWTGVPRKRFSARSHGV-----------------------------------------RCVCVEDPYAAEEDPNLQRYDGCSPHADSC 247          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: A0A4W4FWL0_ELEEL (Neuferricin n=2 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4FWL0_ELEEL)

HSP 1 Score: 153 bits (387), Expect = 5.040e-41
Identity = 93/227 (40.97%), Postives = 124/227 (54.63%), Query Frame = 1
Query:  325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQL-GAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
            L+ILG+VFDV KG KHYG  G Y  F+G+DASR+FV+GDFSEAGL+D +S L PSQ + + DW  FYEK+  Y   G L GRFY  +G+ T+ L+  E    +G K K    EE ++YP CNS W++A GGRVWC +                  +  G  R+  GV + L  +G+G                + RC C  LD  T +N   L  Y  C P ++SC+
Sbjct:   60 LAILGQVFDVEKGRKHYGPDGGYRFFSGRDASRAFVTGDFSEAGLSDDVSDLSPSQIVALYDWLTFYEKE--YTPVGRLIGRFYTERGEPTEALQQAEAHLTEGLKLKAQAEEENRVYPACNSEWSSAAGGRVWCSE------------------KSGGVHRDWTGVPRMLFSSGSG----------------RTRCVCVRLDDRTCSNNPHLRQYKDCPPHADSCL 250          
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Match: UPI000F50F982 (neuferricin n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F50F982)

HSP 1 Score: 152 bits (385), Expect = 8.920e-41
Identity = 92/226 (40.71%), Postives = 117/226 (51.77%), Query Frame = 1
Query:  325 LSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSEAGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATKKLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVPRKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKVKGRCSCYDLDYAT-ANEERLLSYGGCAPDSNSCV 999
            L+ILG+VFDV KG KHYG  G+Y  FTG+DASR+FV+G+F++AGLTD +S L PSQ + + DW  FY+KD  Y   G L GRFY   GK T  L+  E    +G K K    E+ KLYP CNS W +  GGRVWC                  + +  G  R+  GV + L             P         RC C  LD  T +N   L  Y  C+P + SC+
Sbjct:   59 LAILGQVFDVEKGRKHYGPAGSYRFFTGRDASRAFVTGEFTDAGLTDDVSDLSPSQVVALYDWLAFYQKD--YTPVGKLIGRFYSKSGKPTSVLQKLEASLAQGLKLKAQAEEQNKLYPACNSEWNSDRGGRVWC------------------STKSGGVHRDWAGVPRML-----------FSPGSGHT----RCVCVRLDDPTQSNNPNLQEYKDCSPQAESCL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSS5_ECTSI4.110e-16570.69Cytochrome b5 heme-binding domain-containing prote... [more]
A0A6H5LMN7_9PHAE1.090e-13872.88Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7J5ZTI6_AMEME2.170e-4242.29Cytochrome b5 heme-binding domain-containing prote... [more]
A0A5N5JXW0_PANHP6.360e-4241.59Cytochrome b5 heme-binding domain-containing prote... [more]
A0A1I9VZF2_PETMA9.130e-4254.81Neuferricin n=3 Tax=Petromyzon marinus TaxID=7757 ... [more]
A0A6J2WWN4_CHACN2.200e-4136.84neuferricin n=1 Tax=Chanos chanos TaxID=29144 RepI... [more]
A0A3P9MHI7_ORYLA4.270e-4141.20Cytochrome b5 domain containing 2 n=2 Tax=Oryzias ... [more]
A0A672FEF3_SALFA4.640e-4138.24Cytochrome b5 heme-binding domain-containing prote... [more]
A0A4W4FWL0_ELEEL5.040e-4140.97Neuferricin n=2 Tax=Electrophorus electricus TaxID... [more]
UPI000F50F9828.920e-4140.71neuferricin n=1 Tax=Tachysurus fulvidraco TaxID=12... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2174925..2178681 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.5
Seed ortholog evalue3.4e-133
Seed eggNOG ortholog2880.D7FSS5
Preferred nameCYB5D2
KEGG rclassRC00109,RC00110,RC00158
KEGG koko:K00287
KEGG ReactionR00936,R00937,R00939,R00940,R02235,R02236,R11765
KEGG Pathwayko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523
KEGG ModuleM00126,M00840
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0007275,GO:0007399,GO:0008150,GO:0009987,GO:0010720,GO:0012505,GO:0016020,GO:0020037,GO:0022008,GO:0030154,GO:0032501,GO:0032502,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046906,GO:0048037,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065007,GO:0097159,GO:1901363,GO:2000026
EggNOG free text desc.heme binding
EggNOG OGsKOG1108@2759,KOG1110@1
Ec32 ortholog descriptionCytochrome b5-like heme/steroid binding domain
Ec32 orthologEc-09_001470.1
EC1.5.1.3
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons8
Model size1047
Cds size1047
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16633.1prot_C-linearis_contig9.16633.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 2174925..2178681 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930745.7811382-CDS-C-linearis_contig9:2174924..21750091622930745.7811382-CDS-C-linearis_contig9:2174924..2175009Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2174925..2175009 -
1690881227.7082124-CDS-C-linearis_contig9:2174924..21750091690881227.7082124-CDS-C-linearis_contig9:2174924..2175009Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2174925..2175009 -
1622930745.800287-CDS-C-linearis_contig9:2175421..21754861622930745.800287-CDS-C-linearis_contig9:2175421..2175486Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2175422..2175486 -
1690881227.7231083-CDS-C-linearis_contig9:2175421..21754861690881227.7231083-CDS-C-linearis_contig9:2175421..2175486Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2175422..2175486 -
1622930745.8227322-CDS-C-linearis_contig9:2175960..21761831622930745.8227322-CDS-C-linearis_contig9:2175960..2176183Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2175961..2176183 -
1690881227.7344146-CDS-C-linearis_contig9:2175960..21761831690881227.7344146-CDS-C-linearis_contig9:2175960..2176183Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2175961..2176183 -
1622930745.8427565-CDS-C-linearis_contig9:2176512..21766791622930745.8427565-CDS-C-linearis_contig9:2176512..2176679Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2176513..2176679 -
1690881227.746086-CDS-C-linearis_contig9:2176512..21766791690881227.746086-CDS-C-linearis_contig9:2176512..2176679Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2176513..2176679 -
1622930745.8656583-CDS-C-linearis_contig9:2176941..21769981622930745.8656583-CDS-C-linearis_contig9:2176941..2176998Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2176942..2176998 -
1690881227.7564504-CDS-C-linearis_contig9:2176941..21769981690881227.7564504-CDS-C-linearis_contig9:2176941..2176998Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2176942..2176998 -
1622930745.884171-CDS-C-linearis_contig9:2177378..21774991622930745.884171-CDS-C-linearis_contig9:2177378..2177499Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2177379..2177499 -
1690881227.7662542-CDS-C-linearis_contig9:2177378..21774991690881227.7662542-CDS-C-linearis_contig9:2177378..2177499Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2177379..2177499 -
1622930745.896589-CDS-C-linearis_contig9:2177704..21779061622930745.896589-CDS-C-linearis_contig9:2177704..2177906Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2177705..2177906 -
1690881227.7758546-CDS-C-linearis_contig9:2177704..21779061690881227.7758546-CDS-C-linearis_contig9:2177704..2177906Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2177705..2177906 -
1622930745.9113846-CDS-C-linearis_contig9:2178554..21786811622930745.9113846-CDS-C-linearis_contig9:2178554..2178681Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2178555..2178681 -
1690881227.7862878-CDS-C-linearis_contig9:2178554..21786811690881227.7862878-CDS-C-linearis_contig9:2178554..2178681Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2178555..2178681 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16633.1

>prot_C-linearis_contig9.16633.1 ID=prot_C-linearis_contig9.16633.1|Name=mRNA_C-linearis_contig9.16633.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=349bp
MAPELRRRPAAVRRNEAPAISPHPEPPVAVAKSSGCPIQIKSGTYHYVRK
AVVILFPAYILCCMFEVLDPPRPMAENAWDSLMQALGNGPRIFSAAELKA
KGVGSRPMLSILGEVFDVSKGAKHYGKGGAYEGFTGKDASRSFVSGDFSE
AGLTDILSGLEPSQCLGIKDWRDFYEKDPKYKKKGLLAGRFYDVKGKATK
KLKDFERCARKGQKDKELEAEEKKLYPLCNSRWAAAEGGRVWCEDPKKVP
RKAAPKAVHGAAIRQEGPRREGGGVAKQLGAGAGAAGEGGEEPSRDALKV
KGRCSCYDLDYATANEERLLSYGGCAPDSNSCVTKPPEAPKPSPKRKN*
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mRNA from alignment at C-linearis_contig9:2174925..2178681-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16633.1 ID=mRNA_C-linearis_contig9.16633.1|Name=mRNA_C-linearis_contig9.16633.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3757bp|location=Sequence derived from alignment at C-linearis_contig9:2174925..2178681- (Chordaria linearis ClinC8C monoicous)
ATGGCCCCGGAGTTGCGGCGACGTCCTGCCGCTGTGCGGAGGAACGAGGC ACCTGCAATCTCGCCGCACCCAGAGCCGCCTGTTGCCGTAGCGAAAAGCA GCGGCTGCCCAATTCAAATCAAGAGTGGTGAGTGCTGATACCCTAGTCTA TAGATTGATACTATGGTGGCGTCCTGTCGTATGGATAACCGAGGCATAAT GGGTTGTGGAACATCCAGAGGTTCCTACATATATTTATCTTCGATGAGGA GGTTTTGCTCGACAGCAGTGATGTGATCTGCTCCGATTTTTCTATGTTTC CGGGCGGGCGCATGCAGACTCAACGGCCAATGAAGCTCGTTGCCCGCAAT GCGCGCACCGCAATGCGTGCATGTGCTTGTGCGTCCTACTCTGTGCTTCT CTTGCGGCGTACTTGTAGCGAAAACATGCGGCCGGGTCATTGTTTGGCTC TGTTGGCGATGGGTGCGGAAGAATTAGCGCGGGGTTTGTTCGGGCGGACA AAAGGAGGTATCTATGGTAGTCTGTGCGTGTTACTGTTTTGGTGGTTTGT TCAGCCTGCCACCCCTACGATGACGGCTTGGTTTTGGTGTTGCAAGCTGA CACACAACATTCTGTTTTGAGAAAAACAAAGATACTACAATAACTGGCCT TTGTGCACACTACGACTACCGACTACTGCTGCTGCTGCGTTCGGCGGCAA CGCAAACAACAAAACGTACTACATCCCGCCGCTACGTTTCACCATGCCGT CCATGTTACCCCACCAACCCCACAGGAACATACCATTACGTGCGTAAGGC GGTCGTCATTCTCTTCCCCGCGTACATCCTGTGCTGCATGTTCGAGGTCC TGGACCCCCCGCGGCCCATGGCGGAGAACGCCTGGGACTCCTTAATGCAG GCGCTGGGCAACGGCCCTCGAATCTTCTCGGCCGCCGAGCTGAAGGCCAA GGGGGTCGGGTCGCGCCCGATGCTGAGGTGCGTCGCCGTCGCTGCCGTTG TCGTCGTCGTCGTCGTCGTCGTCATGGTCGTCGTTGTTTTGCCCGCTTTT GTTGCTAAGCCCGAAGCCTTTGTAGCCCGTGGCAACGACCGGAGGGTATG AACTTCCGCTCCCGCTCCGGCCCCCTCTCGCATGTTGCCTTGCCTCACGC GTCTGCTGTCGCCTGTTGATACATTTTTTCAGCATCCTGGGAGAGGTGTT CGACGTGTCGAAGGGGGCAAAGCACTATGGCAAGGGGGGCGCGTACGAGG GCTTCACCGGCAAGGATGCCTCGAGATCGTTCGTCAGCGGAGACTTCTCG GAGGTGTTGTAGAGTTGTAATGACTGACAATCATACCCTCTTTCGGCGCA TGCTGTTGTCCATACAGCTGTGCGGGGGGTTGTTGTGAGAGAGCCATGTT GGTAGACCCATCATACATAGGTATGTTCAGCACATTTGTTTGGCTTTTTG GCTGCGTCGGGGGTTCTCTTCTTTCACTAAATACGGCCCGAGCAAGGCGC ACCTTTGTGGGTGTGGTTGCTTTCCACGCTTCCCAGCTGTCTGTCCCCTT CTGCCTTTGATGGCCACCAACGTGCGTTTGAAGCACCTGCCCCCTGACTC GCTTTCTTTGCCCCCTTCCTTTGTCGATCGACCTTTTCTGTTTTCTGCTT GACTTGCGTGTGTTCTGCATCGCTTTGCTGCAGGCGGGGCTGACGGACAT TTTGTCTGGGCTGGAGCCATCGCAGTGCCTAGGCATCAAGGTCAGTAAAA CCTCAGTGAACGGAGAATGTTGCTGCGTGGTGTTGGGGCAGTTTAGCGCC ATACCCTCAACAGCTGCAATGACGGCGTGGAACGTCTTTCGGGTGCCTTC ATTGAATCTCACGGCTCCCTCGGGCTTCATGTCTCGAACCTATTGCGATT GATTGTAGACGGCAATTTTCTCCAGATTCCCACGGCACGAACCAAGCGAA TAAATGAGGCCCCGCCCCTTCTCTGCCTTGGCAATCCCCGCCGGAACATC AGGACTGGCGTGACTTCTACGAGAAAGATCCAAAGTACAAGAAGAAGGGC CTCCTCGCCGGCAGGTTCTATGACGTCAAAGGTAAGGCGACGAAGAAACT GAAGGACTTCGAGAGGTGCGCCAGGAAAGGCCAGAAGGACAAGGAGCTCG AGGCGGAGGAGAAAAAACTGTGAGTCTTCGATAGACTGCGTAGGCTGCCG TGAACGACACAAGGATACCAACACACCCATAGCCAAAATCTTGCCCCCGG GGTGTGTTGTTGGCTTGTGCCTCCACGGTAGCGTGATGCCGGGATCAGCC AAAAACAACTTTCCTCCCAGGACTTTGTGCGTGAGAGAAAAAAAAGGGCG CAGCTCTCTCCACCGCTGAACCCGCCGTCCCTTCAGCAGTCCCCAGCCAT GCCGCCAATGCCTCAACACTTGACACTCGACCTCCCTGCGAACTCACCGT GGCAGTTATCGGCCCCCTGCCTCCCCCGCCCCTCCCGCCCCCACACAGGT ACCCTCTCTGCAACAGCAGATGGGCAGCCGCCGAGGGCGGGAGGGTGTGG TGCGAGGATCCCAAGAAGGTTCCGAGAAAAGCCGCCCCGAAGGCCGTGCA CGGCGCAGCGATTCGGCAAGAGGGGCCCCGGCGGGAAGGCGGCGGTGTCG CGAAACAGCTGGGGGCGGGCGCGGGCGCGGCCGGGGAGGGTGGCGAGGAG CCCAGCCGAGATGCATTAAAGGTGGGCGTTGCTTGTGTGCGCGTCGCCGC CGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAG CGGTAGCAGCGGTAGCAGCGGTAGCAGCGGTAGCAGCGGCAGTAGCTTAT TTGGTGCGTGTGTGATTGGTGTTGGAGGCGAAAGAGACAGCGGCCCCTGA CATTGTGTTTTGCCCAGCAATTCCTTGGCTTCCGGTTCTTTACTTGTAGT AGACTAACTTCGAAGTAGGTTCGAAGGATTGGCCTGGAATCGTGCGATCT TGAAGAAAAATCCCCATCCAATCTAGTTCGACCGCCGGAGGGCTCCATGG ATTTTTGATGGGTGAAACCGCTCTTCGTTGAACATGGCAAGGTTGTGCTG TGATGTGGCCATATCCCCTCCCCGGGACCCCCCTCGTTTTTGTTGGCGCA CGCCCCCCAGTTCAAGCTAGTTGTTCCCCTTCGCGTCAAAAATAGGTGAA GGGGAGATGCAGCTGTTATGATCTCGACTACGCCACAGCCAACGAGGAAC GACTCCTGAGGTAAGGACCAGCGGCCGGGCTAGGCCCGCAAGGGAAGAGT GCCAATGCGAGCCTTGTAAACCTCGCCATTGGTCAGCCTGTTGAGTCCCA TTTGTTGCTATTTTCGGAACGTAGGCAGAGGGAATACATTTACGCTGCGT GTTTGAGAGGAACCCTGGAGCGGGCACGTATGCCAGCGACTTTTATGTTG CTGTCGGATCCACCCTCTTGTCCCGGACGGCGTGCGCCAATCACGCGCGC TCCAAACCCCCTCCCTTTTCTCGCGAACGTTCTCCCAACTTCCTGGTTTA TCTTGTGTTTGTCTTGTGTTTATCTTATGTTTGTCTTGTGCGTTATTTTT TTGGCTTGTGTTTGTCTTGTGTTGTGTCTTATGTCGTGTGTTTGTCTTGT GTTTGTCGGTGGCACGGAGCAGCTACGGGGGGTGCGCTCCGGACTCGAAT TCGTGCGTGACCAAGCCTCCGGAGGCCCCCAAGCCCAGCCCGAAGAGAAA AAACTAA
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Coding sequence (CDS) from alignment at C-linearis_contig9:2174925..2178681-

>mRNA_C-linearis_contig9.16633.1 ID=mRNA_C-linearis_contig9.16633.1|Name=mRNA_C-linearis_contig9.16633.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at C-linearis_contig9:2174925..2178681- (Chordaria linearis ClinC8C monoicous)
ATGGCCCCGGAGTTGCGGCGACGTCCTGCCGCTGTGCGGAGGAACGAGGC
ACCTGCAATCTCGCCGCACCCAGAGCCGCCTGTTGCCGTAGCGAAAAGCA
GCGGCTGCCCAATTCAAATCAAGAGTGATGGCCCCGGAGTTGCGGCGACG
TCCTGCCGCTGTGCGGAGGAACGAGGCACCTGCAATCTCGCCGCACCCAG
AGCCGCCTGTTGCCGTAGCGAAAAGCAGCGGCTGCCCAATTCAAATCAAG
AGTGGAACATACCATTACGTGCGTAAGGCGGTCGTCATTCTCTTCCCCGC
GTACATCCTGTGCTGCATGTTCGAGGTCCTGGACCCCCCGCGGCCCATGG
CGGAGAACGCCTGGGACTCCTTAATGCAGGCGCTGGGCAACGGCCCTCGA
ATCTTCTCGGCCGCCGAGCTGAAGGCCAAGGGGGTCGGGTCGCGCCCGAT
GCTGAGGAACATACCATTACGTGCGTAAGGCGGTCGTCATTCTCTTCCCC
GCGTACATCCTGTGCTGCATGTTCGAGGTCCTGGACCCCCCGCGGCCCAT
GGCGGAGAACGCCTGGGACTCCTTAATGCAGGCGCTGGGCAACGGCCCTC
GAATCTTCTCGGCCGCCGAGCTGAAGGCCAAGGGGGTCGGGTCGCGCCCG
ATGCTGAGCATCCTGGGAGAGGTGTTCGACGTGTCGAAGGGGGCAAAGCA
CTATGGCAAGGGGGGCGCGTACGAGGGCTTCACCGGCAAGGATGCCTCGA
GATCGTTCGTCAGCGGAGACTTCTCGGAGCATCCTGGGAGAGGTGTTCGA
CGTGTCGAAGGGGGCAAAGCACTATGGCAAGGGGGGCGCGTACGAGGGCT
TCACCGGCAAGGATGCCTCGAGATCGTTCGTCAGCGGAGACTTCTCGGAG
GCGGGGCTGACGGACATTTTGTCTGGGCTGGAGCCATCGCAGTGCCTAGG
CATCAAGGCGGGGCTGACGGACATTTTGTCTGGGCTGGAGCCATCGCAGT
GCCTAGGCATCAAGGACTGGCGTGACTTCTACGAGAAAGATCCAAAGTAC
AAGAAGAAGGGCCTCCTCGCCGGCAGGTTCTATGACGTCAAAGGTAAGGC
GACGAAGAAACTGAAGGACTTCGAGAGGTGCGCCAGGAAAGGCCAGAAGG
ACAAGGAGCTCGAGGCGGAGGAGAAAAAACTGACTGGCGTGACTTCTACG
AGAAAGATCCAAAGTACAAGAAGAAGGGCCTCCTCGCCGGCAGGTTCTAT
GACGTCAAAGGTAAGGCGACGAAGAAACTGAAGGACTTCGAGAGGTGCGC
CAGGAAAGGCCAGAAGGACAAGGAGCTCGAGGCGGAGGAGAAAAAACTGT
ACCCTCTCTGCAACAGCAGATGGGCAGCCGCCGAGGGCGGGAGGGTGTGG
TGCGAGGATCCCAAGAAGGTTCCGAGAAAAGCCGCCCCGAAGGCCGTGCA
CGGCGCAGCGATTCGGCAAGAGGGGCCCCGGCGGGAAGGCGGCGGTGTCG
CGAAACAGCTGGGGGCGGGCGCGGGCGCGGCCGGGGAGGGTGGCGAGGAG
CCCAGCCGAGATGCATTAAAGGTACCCTCTCTGCAACAGCAGATGGGCAG
CCGCCGAGGGCGGGAGGGTGTGGTGCGAGGATCCCAAGAAGGTTCCGAGA
AAAGCCGCCCCGAAGGCCGTGCACGGCGCAGCGATTCGGCAAGAGGGGCC
CCGGCGGGAAGGCGGCGGTGTCGCGAAACAGCTGGGGGCGGGCGCGGGCG
CGGCCGGGGAGGGTGGCGAGGAGCCCAGCCGAGATGCATTAAAGGTGAAG
GGGAGATGCAGCTGTTATGATCTCGACTACGCCACAGCCAACGAGGAACG
ACTCCTGAGGTGAAGGGGAGATGCAGCTGTTATGATCTCGACTACGCCAC
AGCCAACGAGGAACGACTCCTGAGCTACGGGGGGTGCGCTCCGGACTCGA
ATTCGTGCGTGACCAAGCCTCCGGAGGCCCCCAAGCCCAGCCCGAAGAGA
AAAAACTAACTACGGGGGGTGCGCTCCGGACTCGAATTCGTGCGTGACCA
AGCCTCCGGAGGCCCCCAAGCCCAGCCCGAAGAGAAAAAACTAA
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