mRNA_C-linearis_contig9.16527.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16527.1
Unique NamemRNA_C-linearis_contig9.16527.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: D7FR54_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR54_ECTSI)

HSP 1 Score: 732 bits (1890), Expect = 8.360e-260
Identity = 379/437 (86.73%), Postives = 408/437 (93.36%), Query Frame = 2
Query:  449 VEGKVLTGERKARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEV 1759
            V+G V TGE KARS+R+EE+ACFRRRMGIK +GEEVADPMESF +MP+A   +DA QTRRV+L NVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRA  +ASGVRG+LLAPTRELAAQIHRDVVRLSRGR+LRVCLLTKAG+ KAAAATGMDS+ ALSGYDIVVSTP+RLVALVRE AV L SVEMVVLDEADKLFDAG   G +DKAF+GQVDEVLAACS++QVQRALFSAT+GQQ+KEL++SVLRDPIFLTVGT NAGAADIDQRLVYVG+EEGKLLAIRQLVQEGLRPPVLVFLQSKDRAK LFHELVYDGINTDVMHASRTQDQRD+IIQRFRTGEIWVLICTDL+ARGIDFKGVNMVINYDFPQSAVSYIHRIGRT     HGVAVTLFTESDM+ LRSIANV+RLSGCE+
Sbjct:   18 VKGGVETGEAKARSIRLEEVACFRRRMGIKVKGEEVADPMESFSEMPSATTSEDAGQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALVRERAVCLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDPIFLTVGTQNAGAADIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFKGVNMVINYDFPQSAVSYIHRIGRTXXXXXHGVAVTLFTESDMNSLRSIANVIRLSGCEM 454          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A6H5JCM6_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM6_9PHAE)

HSP 1 Score: 625 bits (1612), Expect = 1.710e-219
Identity = 326/387 (84.24%), Postives = 355/387 (91.73%), Query Frame = 2
Query:  425 KCNSSKGV-VEGKVLTGERKARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFK 1582
            K  S  G+ V+G V TGE KAR +R+EE+ACFRRRMGIK +GEEVADPM SF +MP+A    +A QTRRV+L NVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRA  +ASGVRG+LLAPTRELAAQIHRDVVRLSRGR+LRVCLLTKAG+ KAAAATGMDSK ALSGYDIVVSTP+RLVALVRE A+ L SVEMVVLDEADKLFDAG   G +DKAF+GQVDEVLAACS++QVQRALFSAT+GQQ+KEL++SVLRD IFLTVGT N+GAADIDQRLVYVG+EEGKLLA+RQLVQEGLRPPVLVFLQSKDRAK LFHELVYDGINTDVMHASRTQDQRD+IIQRFRTGEIWVLICTDL+ARGIDFK
Sbjct:    9 KGKSGNGIAVKGGVETGEAKARLIRLEEVACFRRRMGIKVKGEEVADPMASFSEMPSASTSKEAAQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSKNALSGYDIVVSTPMRLVALVRERAICLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDHIFLTVGTQNSGAADIDQRLVYVGREEGKLLAVRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFK 395          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A2D4C2B4_PYTIN (RNA helicase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2B4_PYTIN)

HSP 1 Score: 494 bits (1271), Expect = 2.250e-164
Identity = 258/466 (55.36%), Postives = 345/466 (74.03%), Query Frame = 2
Query:  500 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKK--ALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQF 1891
            EE+  FR++M I+  G  V  P+ +F  M          + R V+L N+E S +KEPTP+QMQA+P L+ GRD+LA APTGSGKTAAF +PM+  LG      +  G+R ++L+PTRELA QI  +  RLS GRK  + LL+KA      AAT + S K      +D+V++TPLRLV LV+E  + L  VEM+ LDEAD+LFD G         FV Q+DE+LAAC++ +VQRA+FSAT+ Q ++E+A+SVLRDP+ +++G  NAGA+ I+Q+LV+VGKEEGKL+A++QL+QEGLR P L+F+Q+K+RA EL+HEL+YDGIN   +HA RT++QRD+ I++FR G++WVLICTDLM+RGIDFK VNMVINYDFPQ AVSYIHRIGRTGR GR G+AVT FTE DM YLR+IANVM+LSGC+VPDWMLT+KK   + R++  +  P+R +I TVS YD+++  +R+ 
Sbjct:  172 EEVRLFRKQMNIRVEGTSVPAPIATFDAMKLNAT---QLKMRSVLLHNIEASEYKEPTPIQMQAIPSLLLGRDVLATAPTGSGKTAAFAIPMLANLGAP----QQQGIRAVVLSPTRELAVQIFHEFQRLSAGRKFHIVLLSKA-----TAATMISSIKNNCTVNHDLVIATPLRLVHLVQEAKLDLSMVEMICLDEADRLFDMG---------FVEQIDEILAACTHPRVQRAMFSATMLQGVEEMAQSVLRDPVKISIGVKNAGASSIEQKLVFVGKEEGKLVAMKQLIQEGLRLPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETIRQFRAGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRKGLAVTFFTEDDMAYLRTIANVMKLSGCDVPDWMLTLKKASATKRKQLLKAPPQRKRISTVSGYDLQKAHKRKM 616          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A8K1CQ63_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ63_PYTOL)

HSP 1 Score: 490 bits (1262), Expect = 2.860e-162
Identity = 258/480 (53.75%), Postives = 350/480 (72.92%), Query Frame = 2
Query:  500 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKA--LSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMVNDSKKAAALGNN 1933
            EEI  FR++M I+  G  V  P+ +F  M   G  +   + R V+L+N+E S +KEPTP+QMQA+P ++ GRD+LA APTGSGKTAAF +P++  LGV +      G+R ++L+PTRELA QI  +  RLS GRK  + LL+KA      AAT + S K+     +DI+++TPLRLV L++E  + L  VEMV LDEAD+LFD G         FV Q+DE+LAAC++ ++QRA+FSAT+ Q ++E+A+SVLRDPI +++G  NAGA+ I+Q+LV+VGKEEGKL+A++QL+  GL+ P L+F+Q+K+RA EL+HEL+YDGIN   +HA RT++QRD+ +++FRTG++WVLICTDLM+RGIDFK VNMVINYDFPQ AVSYIHRIGRTGR GR G AVT FTE DM YLR+IANVM+LSGCEVPDWMLT+KK   + R++  +   +R +I TVS YD+++  +R    +     +  G N
Sbjct:  203 EEIRVFRKQMNIRVDGASVPPPIATFDAMKLVGTQE---KMRSVLLKNIEASEYKEPTPIQMQAIPSMLLGRDVLATAPTGSGKTAAFAIPLLANLGVPKQ----EGIRAVVLSPTRELAVQISTEFHRLSAGRKFHIVLLSKA-----TAATMISSIKSNCTVNHDILIATPLRLVHLIQEAKLDLSMVEMVCLDEADRLFDMG---------FVEQIDEILAACTHPKIQRAMFSATMMQGVEEMAQSVLRDPIKISIGVKNAGASSIEQKLVFVGKEEGKLVAMKQLIHSGLKIPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETMRQFRTGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRQGYAVTFFTEDDMLYLRTIANVMKLSGCEVPDWMLTLKKASANKRKELVKAPLQRKRISTVSGYDLQKSHKRHLAKSKKHSPSDEGGN 661          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A225VXV3_9STRA (RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VXV3_9STRA)

HSP 1 Score: 474 bits (1220), Expect = 1.680e-158
Identity = 254/471 (53.93%), Postives = 343/471 (72.82%), Query Frame = 2
Query:  500 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMVNDSKK 1912
            E +   RR++GI+  G  V  P+ SF DM        A+Q +R++L+N+E S +KEPT VQMQA+P  +  RD+LA APTGSGKTAAF +P++  L         SG+R ++LAPTR+LA QI  +  RL+ G+KL V LL+KA +A  A+ T   SK A++ +D++++TPLRLV L++E  V L +VEMV LDEAD+L + G         FV QVDE+ AAC++ +VQRA+FSAT+ + ++ELA++VLRDP+ + VGT NAGA  IDQ+LV+VGKEEGKL+A++QL+ EGL+ P L+F+Q+K+RA EL+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMVINYDFPQSAVSYIHRIG          AVT FTE DM YLR+IANVM++SGCEVPDWML++KK   S R++  +  P R +I TVS YD+++  R + M   + K
Sbjct:    9 EGVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANLAA--GSGTGSGIRSIVLAPTRDLAVQIRTEFTRLAAGKKLHVTLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLIQEAKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGATTIDQKLVFVGKEEGKLVAMKQLLHEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTFFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPTRHRINTVSGYDLQKSNRLKQMKQSNHK 464          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A1V9ZVZ5_9STRA (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVZ5_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 8.250e-158
Identity = 254/476 (53.36%), Postives = 336/476 (70.59%), Query Frame = 2
Query:  500 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMV--NDSKKAAA 1921
            ++I   R+R+ I   G  V DP+  F  M AA      +  + V+L N+E S +K PT +QMQA+P ++  RD+L  APTGSGKTAAF +PM+L L   +   +  G+R ++LAPTRELA QIH +  RLS G+K  + LL+KA ++  A+     +K     YDIV++TPLRLV L+ E ++ L  VEM+ LDEAD+LF+ G         FV Q+DEV AAC+N  +QR +FSAT+ Q ++E+A+SVL+DP+ + +G  NAGA  I+QRL++VGKEEGKL+A++QL+QEGL+ PVL+F+Q+KDRAKEL+HELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMVINYDFPQSAVSYIHRIG        G AVT FTESDM YLR+IANVM+LSGC+VPDWML MKK     R++  +  P+R +I TVS YD+++    + M   N  KK  A
Sbjct:   54 DDIKHLRKRLNIAVWGTVVPDPIVEFAQMKAA------KSIKSVLLTNIESSEYKNPTAIQMQAIPAILQKRDVLGIAPTGSGKTAAFAIPMLLNLETPQ---QDHGIRSIVLAPTRELAVQIHGEFQRLSSGKKFHISLLSKASASTMAS----HAKTCTVNYDIVIATPLRLVHLISEQSIPLDKVEMICLDEADRLFEMG---------FVEQIDEVFAACTNPSLQRMMFSATMLQGVEEMAQSVLKDPVKVAIGVKNAGAITINQRLMFVGKEEGKLVAMKQLIQEGLKLPVLMFVQNKDRAKELYHELVYDGINVGAIHADRTKEQRDKVIKDFRTGAVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGXXXXXXXXGEAVTFFTESDMIYLRTIANVMKLSGCDVPDWMLAMKKASVRQRKQLLKAPPKRHRIETVSGYDLKKAHNHKLMKKHNAEKKKVA 507          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A2P4XS83_9STRA (RNA helicase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XS83_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 1.090e-157
Identity = 256/472 (54.24%), Postives = 347/472 (73.52%), Query Frame = 2
Query:  467 TGERKARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRR 1882
            TG++   S   +E+   RR++GI+  G  V  P+ SF DM    P   A+Q +R +L+N+E S +KEPT VQMQA+P  +  RD+LA APTGSGKTAAF +P++  L      A +SG+R ++LAPTR+LA QI  +  RL+ G+KL + LL+KA +A  A+ T   SK A++ +D++++TPLRLV L++E  V L +VEMV LDEAD+L + G         FV QVDE+ AAC++ +VQRA+FSAT+ + ++ELA++VLRDP+ + VGT NAGA+ IDQ LV+VGKEEGKL+A++QL+ EGL+ P L+F+Q+K+RA EL+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMVINYDFPQSAVSYIHRIG          AVT FTE DM YLR+IANVM++SGCEVPDWML++KK   S R++  +  P R +I TVS YD+++  R
Sbjct:  196 TGKKNPASAEQDEVQMLRRQLGIRVSGVSVPAPITSFADM-RLDPSASAQQMKRHLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILGNLAA--GSATSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLIQEAKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQELVFVGKEEGKLVAMKQLLHEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTFFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPTRHRINTVSGYDLQKANR 652          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A024TW13_9STRA (RNA helicase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW13_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 4.340e-157
Identity = 251/471 (53.29%), Postives = 338/471 (71.76%), Query Frame = 2
Query:  482 ARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFM 1894
            ++S   ++I   RRR+ I   G  V DP+  F  M       +A   + V+LRN+EES +K PTP+QMQ++P ++  RD+L  APTGSGKTAAF +PM+L LG      +  G+R ++L PTRELA QIH +  RLS GRK  + LL+KA     AA     SK     YDIV++TPLRLV L+ +  V+L +V+M+ LDEAD+LF+ G         FV Q+D++ AAC+N ++QR +FSAT+ Q ++E+A+SVL+DPI +++GT NAGA+ I Q+L++VGKEEGKL+A++QL+QEGL+ PVL+F+Q+KDRAKEL+ ELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMVIN+DFPQSAVSYIHRIGR       G AVT FTE+DM YLR+IANVM+LSGC+VP WML +KK     R++  +  P R +I TVS YD+++  +R+ M
Sbjct:  187 SKSSHSDDIKALRRRLNIYVEGTVVPDPILEFAQMKT-----NATALKAVVLRNIEESQYKNPTPIQMQSIPAILKQRDVLGIAPTGSGKTAAFAIPMLLNLGAP----DVRGIRSVVLVPTRELAVQIHAEFQRLSVGRKFHIVLLSKAS----AATISSHSKTCTVNYDIVIATPLRLVHLIHKENVTLDTVDMICLDEADRLFEMG---------FVEQIDDIFAACTNPKMQRMMFSATMLQGVEEMAQSVLKDPIKISIGTKNAGASTITQKLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGVVWVLICTDLMSRGIDFKGVNMVINFDFPQSAVSYIHRIGRXXXXXXPGEAVTFFTENDMVYLRTIANVMKLSGCDVPPWMLNLKKASMRKRKQLLKAPPERHRIETVSGYDLQKANKRRLM 635          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A485LSG4_9STRA (RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSG4_9STRA)

HSP 1 Score: 475 bits (1223), Expect = 6.130e-157
Identity = 254/465 (54.62%), Postives = 332/465 (71.40%), Query Frame = 2
Query:  500 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFM 1894
            +++   RRR+ I  +G  V DP+  F  M  +     A   + V+LRN+E S +K PTP+QMQ++P ++ GRD+L  APTGSGKTAAF +PM+L L    A A+  G+R ++L PTRELA QIH +  RLS GRK  + LL+KA     AA     SK     YDIV++TPLRLV L+    V L  VEM+ LDEAD+LFD G         FV Q+D+V AAC+N  +QR +FSAT+ Q ++E+A+SVL+DPI +++G  NAGA  I QRL++VGKEEGKL+A++QL+QEGL+ PVL+F+Q+KDRAKEL+ ELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMVINYDFPQSAVSYIHRIG        G AVT FTESDM +LR+IANVM+LSGC+VPDWML +KK     R++  +  P+R +I TVS YD+++  +R+ M
Sbjct:  189 DDLKALRRRLNISVQGTVVPDPLLEFAHMKTS-----ATALKSVVLRNIEASQYKNPTPIQMQSIPAILKGRDVLGIAPTGSGKTAAFAIPMLLNL---EAPAQ-QGIRSVVLVPTRELAVQIHAEFQRLSAGRKFHIVLLSKAS----AATISSHSKNCTVNYDIVIATPLRLVHLITNDGVKLDQVEMICLDEADRLFDMG---------FVEQIDDVFAACTNPTMQRMMFSATMLQGVEEMAQSVLKDPIKVSIGVKNAGATTIKQRLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGTVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGXXXXXXXXGEAVTFFTESDMVHLRTIANVMKLSGCDVPDWMLNLKKASIRQRKQLLKAPPQRYRIETVSGYDLQKANKRRLM 631          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: L1J3V1_GUITC (RNA helicase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J3V1_GUITC)

HSP 1 Score: 468 bits (1205), Expect = 7.430e-157
Identity = 253/471 (53.72%), Postives = 338/471 (71.76%), Query Frame = 2
Query:  500 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMVNDSKK 1912
            +EI  FRR+MGI   G+E+A P+ +F ++  +       + ++ +L  +E + WKEPTP+QMQA+PIL+  RDL+A APTGSGKT AFV+P+   L   +      G+RGL+++PTRELA QI      L    KL+V LLTKA +A + AA  MD +     +D+VVSTP RLV+L+++ ++ L SVE++++DEADKLF+ G         F+ Q+DE+LAACSN ++Q++LFSATI  Q++ELA+S++  P F+TVG+     + I Q+LV+VG EEGKL+AIRQL+Q GL+PPVL+F+QS DRAK+LF ELVYDGIN DVMHA RTQ QRD+II +FR+G IWVLICTDLMARGIDFKGVN+VINYDFPQS +SYIHRIGRTGR GR G AVT FT  D+ YLRSIANVM+ SGC+V DWML +KK  +   +  ++ AP R  I  V +   +Q++    M+  +KK
Sbjct:   11 DEIKTFRRQMGITVSGDEIAPPIGTFSEIKLS-------KEQKWLLHGIETAGWKEPTPIQMQAIPILLERRDLVACAPTGSGKTGAFVIPLFALLQAPKK----EGIRGLIVSPTRELATQIFNQCKLLKAFSKLQVKLLTKA-TAASVAALQMDPQA--RNHDVVVSTPARLVSLLQQKSLDLSSVELLIVDEADKLFEEG---------FITQLDEILAACSNRKLQKSLFSATIPPQIEELARSIMPHPTFVTVGSKVGANSKIKQKLVFVGSEEGKLIAIRQLIQTGLKPPVLMFVQSIDRAKQLFRELVYDGINVDVMHAERTQAQRDNIISQFRSGAIWVLICTDLMARGIDFKGVNLVINYDFPQSTISYIHRIGRTGRGGREGEAVTFFTGEDVLYLRSIANVMKQSGCDVADWMLQLKKPGKKKAKMLKKKAPERKDIVEVPRCFKQQRKXXXQMIEGTKK 458          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR54_ECTSI8.360e-26086.73RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCM6_9PHAE1.710e-21984.24RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A2D4C2B4_PYTIN2.250e-16455.36RNA helicase (Fragment) n=1 Tax=Pythium insidiosum... [more]
A0A8K1CQ63_PYTOL2.860e-16253.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225VXV3_9STRA1.680e-15853.93RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A1V9ZVZ5_9STRA8.250e-15853.36RNA helicase n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A2P4XS83_9STRA1.090e-15754.24RNA helicase n=2 Tax=Phytophthora palmivora var. p... [more]
A0A024TW13_9STRA4.340e-15753.29RNA helicase n=1 Tax=Aphanomyces invadans TaxID=15... [more]
A0A485LSG4_9STRA6.130e-15754.62RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
L1J3V1_GUITC7.430e-15753.72RNA helicase n=2 Tax=Guillardia theta TaxID=55529 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1107757..1114315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score733.8
Seed ortholog evalue6.7e-209
Seed eggNOG ortholog2880.D7FR54
Preferred nameDDX52
KEGG koko:K14779,ko:K14807
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022613,GO:0030490,GO:0030554,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042274,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048254,GO:0051179,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsKOG0344@1,KOG0344@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons6
Model size1936
Cds size1854
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930726.3368719-CDS-C-linearis_contig9:1107756..11079361622930726.3368719-CDS-C-linearis_contig9:1107756..1107936Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1107757..1107936 -
1690881217.7604637-CDS-C-linearis_contig9:1107756..11079361690881217.7604637-CDS-C-linearis_contig9:1107756..1107936Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1107757..1107936 -
1622930726.356846-CDS-C-linearis_contig9:1108169..11083431622930726.356846-CDS-C-linearis_contig9:1108169..1108343Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1108170..1108343 -
1690881217.772091-CDS-C-linearis_contig9:1108169..11083431690881217.772091-CDS-C-linearis_contig9:1108169..1108343Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1108170..1108343 -
1622930726.374731-CDS-C-linearis_contig9:1109184..11092771622930726.374731-CDS-C-linearis_contig9:1109184..1109277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1109185..1109277 -
1690881217.7856488-CDS-C-linearis_contig9:1109184..11092771690881217.7856488-CDS-C-linearis_contig9:1109184..1109277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1109185..1109277 -
1622930726.38777-CDS-C-linearis_contig9:1112443..11125091622930726.38777-CDS-C-linearis_contig9:1112443..1112509Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1112444..1112509 -
1690881217.7986426-CDS-C-linearis_contig9:1112443..11125091690881217.7986426-CDS-C-linearis_contig9:1112443..1112509Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1112444..1112509 -
1622930726.4090374-CDS-C-linearis_contig9:1112651..11128521622930726.4090374-CDS-C-linearis_contig9:1112651..1112852Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1112652..1112852 -
1690881217.8124483-CDS-C-linearis_contig9:1112651..11128521690881217.8124483-CDS-C-linearis_contig9:1112651..1112852Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1112652..1112852 -
1622930726.4255497-CDS-C-linearis_contig9:1113093..11142331622930726.4255497-CDS-C-linearis_contig9:1113093..1114233Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1113094..1114233 -
1690881217.830851-CDS-C-linearis_contig9:1113093..11142331690881217.830851-CDS-C-linearis_contig9:1113093..1114233Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1113094..1114233 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930726.4437184-UTR-C-linearis_contig9:1114233..11143151622930726.4437184-UTR-C-linearis_contig9:1114233..1114315Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1114234..1114315 -
1690881217.8437898-UTR-C-linearis_contig9:1114233..11143151690881217.8437898-UTR-C-linearis_contig9:1114233..1114315Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1114234..1114315 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16527.1prot_C-linearis_contig9.16527.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 1107757..1114233 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16527.1

>prot_C-linearis_contig9.16527.1 ID=prot_C-linearis_contig9.16527.1|Name=mRNA_C-linearis_contig9.16527.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=618bp
MSSRELLEMLGSGAAFGKKAHQPSERRDAAKKPPSTINFFAAAAGGAPSS
SAGKKRRRAPNDGGKAKPSSAGTSQVLVSKATSKPAARASSKGKGGGSAL
ALFAPTPAASASAGKCNSSKGVVEGKVLTGERKARSVRVEEIACFRRRMG
IKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQ
MQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGL
LLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKAL
SGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDK
AFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTD
NAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELF
HELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFK
GVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIAN
VMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRR
RQFMVNDSKKAAALGNN*
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mRNA from alignment at C-linearis_contig9:1107757..1114315-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16527.1 ID=mRNA_C-linearis_contig9.16527.1|Name=mRNA_C-linearis_contig9.16527.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6559bp|location=Sequence derived from alignment at C-linearis_contig9:1107757..1114315- (Chordaria linearis ClinC8C monoicous)
CTCACCACCCACATCGCTTGCCTTTGTCAAGAGAGACAAAGAACGACACG CGCTTCTCAGAGAGATAGGCTAGGCGTGAAGCATGTCCTCCCGCGAGCTA CTCGAGATGCTAGGGAGTGGTGCGGCGTTCGGGAAAAAGGCACATCAGCC GAGCGAGCGACGAGATGCCGCGAAGAAGCCCCCGTCTACCATCAATTTCT TCGCTGCTGCTGCCGGTGGTGCTCCCAGCAGTTCCGCTGGCAAAAAGAGG AGGCGGGCACCCAATGATGGGGGCAAGGCAAAGCCTTCTTCGGCAGGAAC GAGTCAAGTACTAGTCAGCAAGGCCACCTCGAAACCGGCTGCCCGCGCAT CCTCCAAGGGCAAGGGCGGTGGTTCAGCGTTGGCGTTGTTCGCACCGACC CCAGCGGCCAGCGCGTCCGCAGGCAAGTGCAACAGCTCAAAAGGTGTCGT CGAGGGCAAGGTGTTGACAGGAGAAAGGAAGGCTAGGTCTGTTCGCGTGG AAGAAATCGCCTGCTTTCGGCGAAGGATGGGTATCAAAGCGAGGGGCGAA GAAGTTGCGGACCCCATGGAGTCTTTCGGGGACATGCCGGCCGCCGGACC TGGAGACGACGCGCGACAGACAAGGCGCGTAATTCTGCGGAATGTGGAGG AGTCCGCATGGAAAGAACCAACCCCTGTTCAGATGCAAGCCGTGCCAATC CTTGTTGCCGGTCGGGACTTGCTGGCAGCGGCCCCAACGGGCTCGGGAAA GACCGCTGCCTTCGTCATGCCGATGATCCTCAGATTGGGGGTGCAGCGAG CATGCGCTGAGGCCTCTGGTGTGCGAGGCCTCTTGCTGGCCCCAACTCGG GAGCTTGCTGCCCAGATCCATCGCGATGTTGTACGTCTCTCGCGCGGACG AAAGCTGCGCGTGTGCTTGCTGACGAAAGCAGGCTCAGCGAAGGCGGCCG CCGCCACGGGCATGGACAGTAAGAAGGCACTTTCGGGATATGATATCGTC GTGTCGACCCCTTTGCGGCTAGTGGCTCTCGTGCGGGAGGGGGCAGTGTC CTTGGTGAGTGTAGAGATGGTGGTTCTGGACGAAGCCGATAAACTATTTG ACGCCGGGACCGTGGGTGGTAGCAACGACAAAGCTTTCGTGGGACAGGTA GACGAGGTGCTGGCGGCCTGTTCCAATGAACAAGTTCAGCGGGCTTTGTT CAGCGCCACGATCGGACAGCAGGTGAGCGTGAGCTTTTCTTGGGTTGGTC CCGAATTTCGGCTTGAAACTCTTACATAGGACGTTTTCGTTCTTGTTCCC ATCTCGCGGGGTGTGACATCCGTACATCCCGATTTGTGTTTCCCAATGCC CACACCACACCGTGTGTGTTTCAAAAGTTCATGCCATATAGTTACTTGGG ACGAACATTCACCGAGGGTCTGTCTCACTTTTGTTCGATTCGTTTGGGTT CGTTTCGCAACAGATGAAAGAGCTAGCGAAGAGCGTCCTACGCGATCCAA TTTTCCTTACGGTGGGTACCGACAACGCTGGGGCTGCAGATATTGACCAA CGCTTGGTGTACGTCGGCAAGGAGGAAGGCAAACTTCTGGCCATTCGGCA ACTGGTTCAAGAGGGATTGCGCCCTCCTGTCCTTGTGTTTCTGCAGTCCA AGGACCGAGCCAAGGTACAAATGCCAATGTTGTGGGCCGTTTGGAACGGG TAGCGTTTGTTGGCGCAATCCCCACTGCTACTGAAGTCTTGCCTGTGATA CATCATTGTGTTTCGCCGACGCTCCGTCCCGACTTTTGTCCGTGTGCTGC CCGCAGGAGCTGTTCCACGAGTTAGTGTATGACGGCATCAACACGGACGT AATGCACGCGAGTCGAACCCAGGTGTGCAGCATAGCATCACACGAGTAGA CCAAGTGCAATGGTGCAGCACAGCTGGGTCTTATTTGTGGGCGAATTCTG AAGAAGAGATACTTCGTACAAGGATTTCGGCGGCTTACGCCGCCACGCTC AGTGAAGCGCGTCCCAAGATGCATGGGTTGTGGTGCAAGGCATGCTATAA GCACATGGTAGTCGACAGCAGTACATACATACACATACATGTAGTACACA TGTAGTCTCAGAAGTGGACACGGAGAACAACCGAAAACACACACACATGA CACGTAGACTAGACTATCAGCGTTGCAAAAACCTGCCTACACACGAAAAA CGTTTTTTATCGGCGGCTTTCGCCGCCACGATAAGTGTGACACACACAGC CAGCACAGCGAGGAGAGAGGCCGAAAGCGGTGCAGACGCTGATGACATGC GAGCGCGAGTGGATCGGCACATGTTAGTGGACAGCAGTAAATACACTACA TAATACATGTAATCTTAGAAGTGGGGAGGGAGAACAACAACCGAACACAC ACTCACAAAAATGACACGTATTATGATAGACTATCAGCGTTGTTGCAAAA ATCTGCACAACAGTCTAAACCTTTTTAATACATACTCCGGAGTACATTGT AAATTTCACGAGAGTGCACCATTTATTTCATGTTCTCTCGAGCGATCACA GAGCAGCGTTGGCCCTATCTAGAGCGCCGTCGCTGGCAGTGTTGTAGTAG CACTTCGTAGGGCAAATAAATTCATTGCGCCGTGCACTCAATCAAGCACC TTGTAGGACGTCGCATTAATGTGGGGCTGCGTGGTTGGGGCTGTGTCGTC GCGTAAGAAGAGGTGTTCAGCGTCGTCGCGTCAGAAGAGGTGTTCAGCGT CGTCTATGTCTAGGCACGAACGACGAACTGACAGCATTGAAATTGGTGGA CGCCGTCGCTGGCAATAATAATAGCGGTTGGTTGCGCATCCCGCACAGTT CTGAGGTTAATGCGTGGTTGACTACTTAGCGGTTTCACTGTTGCTATTCT GCGTTTAATGGTTTGCACTTGACAAATTTGAGCCGGTCGCCCCGGTTGAC TAGTGGTTTCACTGTTGCTATTCTGCGTTTAATGGTTTGCACTTGACAAA TTTGAGCCGGTCGCCCCGGTTGACTAGTGGTTTAACCTCGAACCCACCAG CAGCAAGGTCTGGAGTTCAATTCCAAGCAAACAAAGGTGATTATTTTGCC ACTTTGCAGGTGAAAGCGATAACATACGAAGTATATATCTGAAAAAACTC GTGAGTACCAAACTTCGACTTAGTTAGCACGTTGACGAGGGAAAGGGATG GCTGCACCCTTCTCGCGATAAAATCCAAGGCAAGCACCGCAGGAGGAAGG TGGGGCAAAAAAGAAAGAGAAAGGGAAGAAAAAAGCCCCAGTGTTTACCC CCCCCTGTGTGACCCCGGTTGGTTCTAGTTGTACAGAAAATACACTGACG AACAAGTAAGTGTAGACTAAATACACCGCGACGTGTATTACACGTCTCGC CTTGATCGGAAAGGCTGTCGCCAAATAAATGGGACGAACACACACACACA CACACTTGTGCGGGTTCAGTGTTGGTGTGGAGTTCATTGTAGTTTTGGGT GCTCGGTGTGGAGTTCATGGTAGTTTTGGGTGCTCGCGCACTATTGGTGG GTCCTGAAACAACATTCTGTGTGCTTTCAACGACAGACTATGGAATGCTC ACATGGCGTTATCAAATGATGAAGCTTTATCGCATAAGGCATTATATATG ACGCTTGTCACAGAGGAGGCGTTATCACAAGCAAGCCTCGATCACAAGCC TCGGGAAATTAACATCTAGACAGACGGCAACTAACTATCTTCGCGCCACG ACGCAGCATTATTTCTACAGCAATTTGAGGTCGTACACACACGAAAGGAG AGAGTTTTTTATCGGCGGCTTTCGCCGCCAAGATAAGTGTGACACACACA AAGCCAGCACAGCGAGAGACCGAAAGCGGTGCAGACGCCGATGGTATAAG AGCGCGAGTGGATCGGTCGATATGCGAGTGCGAGAAAAGATACCGATTTC CAGTTCGGTCAAACAGACAGAGACAACAACAGCAGCAGCAGCAGCAGTAT AATAGACTTTTGAGCAGAGAGAGAGAGAGAGCAGAGGGACGAGAAAGCAA AAAACAGACAGAGACAGAGAGATAGAGAGAGATGGACAGACCGAATGACA GTTAAACGAAACACAAAGACAGAGAGCACACATAGTCTACACACACAGAG AGAGTTAGAGAGAGGAAAAGATTCGATGTTCAGAAGAGACCGGGAGAGAG AGCGGTTGAAACGTACACAAATGTTGCGTGAAGCCATTCTCTGTGTTTGT GTGGAGAGTGGGGTAGTGTGCCTGTGGGGCGACAGGACCACCGCGCAAGC TATAACTGTTCCGCCTCATTCCGCCTGCGCAATACATGTAAAAACTAATC CGAGTGCACTAAAAAAATATGTTTCCGTGATGTACGTGTTCTTGAATTCG TGTTCTTGAATTCCGTTCCGAAAGAGATGCGTGATTCGGAAGGCACACAG ACAGAAATAATCTGGATAGAAAAAAGGTTGTAGACACGGAATGGAGAGCG CGTAAGACCCCTCTGAGCGCTGAGTTTGCGTTTGCGAAAACCGCGAAAGA CAACAAAGGGAGATAGATCCCGATTTCCGGGCGGTTCAAACAGGAGAGCG GGATAAGCACAGAAACAGCCAGAAACAGCAGTAGATGGGAGACACCCAGA CCACCCAGCAGAGGGAAAACCGAGAGAATGAGAGACAAAGAGAGACGAAG GAAGGCGCAGGCAGACCCAGGCCCGGAGCGGAGAGCACCGTGGCGCGAAA AAATGGCGCAACGACGCTAAAACCACGCAATCGCCGAATTCAGAAATGCT GCCCGCTGGTGCGGTGCGCCCGAGCCGTTCGGCTGAACTCTGAAACCAAG TGAATAAGCGTGCTGGCCTGTGAGAGCCCGAGAGCGCGCCTCCGAGCGCG GGGAACGTTTTCGGAAATGGAGCGATTCTAGCGAAAAGATAAATGATATA GCTGTTATTAGTCTAGCAAATCGATATTAATTTTCATTTTGCCCAAAGTT CACGTAGAGGCGTGTCTTCCTCTTTCGCATCGTTGCAGGATCAGCGTGAT GATATCATTCAGCGCTTTAGGACTGGGGAGATTTGGGTCCTCATCTGCAC GGACCTCATGGCGCGAGGCATCGATTTCAAGGTGGGATGATACTAAAGTG GGTCACGCGAATGTGGCAAGCCCTTTCCCCCTTCTATTCCAACAAAAAAC ACTCTGATGTAGAAATCCAACATTTTGCGTCTGTATTTGAACTTAAAGGC TAGAGCATGCAGGTTTGTCGGTCGTTCGCTCTGTACTTACACCGTCTTCA CAGACAACGGGAACTGGAGACAGATGTTTTTTTTTCTCGCCCATTAATGT TTTTCGTAGCCTGCCTCATCCTCTTCACTACAACTAGCTAGGCTACCATC CGGGGTCACATAGGAGGGGATGTCTCCACCTACCTACCTCCTGCGATGTA TGTATGGTATCGACTCCCGTGAGTGCCCAGAAATACGGGCAACCTCGTGG CTGTACATAGTTGCAATGCTCGAGGTAAGCGTGGTGGCAGGCATGAAAAC GATAAACAGCCGAAAAGCGCCCTCGAAACCCTTTCTTTGGGGATGCGTCA AGTTTCCTCCTCGGCGCTTGGGACTATCTCCCTCGTTATTGCGCCTCCCA AGCTCAGCCGGGGCCCTCGTAAGGCACAAGTTTCAAATGTGACGGGCGCA ACTGCATTTTCCAAAGAGAGGTGCAGGAGGCCAGCAATGGCAATACGGGA AAATCTGCAGTACAACCTCTAGCCACGGTGGCACGCTCGCTGGGCGTGTT TCGAGGTGCGGCATTCCGTTCGACGGGATGGGTCCCCTCCAAACTATTTG TGGCTAACATTTGAGTTTTGTGTCGAGTTGGTGGATACTTGAACAACCGA TACCTTCCTAACACCTCTTCTACACGCCCACATGGTGATCGAACGATGTT GTCGTTTGCTGTCCTGTGTCAGGGTGTCAACATGGTGATAAACTACGATT TCCCGCAGAGCGCCGTCTCGTACATCCACCGCATCGGACGAACTGGGAGA GCCGGCCGCCATGGCGTGGCTGTGACTCTTTTCACCGAATCGGACATGGA CTATCTTCGCAGCATCGCCAATGTCATGCGTCTTAGTGGGTGTGAGGTAA GCCTCTGCTTCACTCTTTGTATTCAAAGTTCAGCAGAACCTCGCTTCTCG CTGAACAAGGCTCCAAGTAAGTTTCACGGCAAGTGCTGGGATTAACACCG ACCATCTTGGGTGAAAGGTGGGGCGCAAGGCTTAAATTGAGATATACAAC TTCTGTCCTCCCTCATCAACGCCAGTACGTGCCAGTACGTGCCACCACCT CATTCCGTGGACCATCGACTGCCGGGCAGGTCCCAGATTGGATGCTAACC ATGAAAAAGGAGAGGCGATCTGACCGACGAAAGCGCGAGCAAGGAGCTCC TCGTCGCGATCAAATCGGCACTGTGTCGAAGTACGATGTTCGACAAAAGC GCCGTCGGCAGTTCATGGTCAACGACAGCAAGAAGGCCGCAGCGCTCGGC AATAACTGA
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Coding sequence (CDS) from alignment at C-linearis_contig9:1107757..1114315-

>mRNA_C-linearis_contig9.16527.1 ID=mRNA_C-linearis_contig9.16527.1|Name=mRNA_C-linearis_contig9.16527.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3708bp|location=Sequence derived from alignment at C-linearis_contig9:1107757..1114315- (Chordaria linearis ClinC8C monoicous)
ATGTCCTCCCGCGAGCTACTCGAGATGCTAGGGAGTGGTGCGGCGTTCGG
GAAAAAGGCACATCAGCCGAGCGAGCGACGAGATGCCGCGAAGAAGCCCC
CGTCTACCATCAATTTCTTCGCTGCTGCTGCCGGTGGTGCTCCCAGCAGT
TCCGCTGGCAAAAAGAGGAGGCGGGCACCCAATGATGGGGGCAAGGCAAA
GCCTTCTTCGGCAGGAACGAGTCAAGTACTAGTCAGCAAGGCCACCTCGA
AACCGGCTGCCCGCGCATCCTCCAAGGGCAAGGGCGGTGGTTCAGCGTTG
GCGTTGTTCGCACCGACCCCAGCGGCCAGCGCGTCCGCAGGCAAGTGCAA
CAGCTCAAAAGGTGTCGTCGAGGGCAAGGTGTTGACAGGAGAAAGGAAGG
CTAGGTCTGTTCGCGTGGAAGAAATCGCCTGCTTTCGGCGAAGGATGGGT
ATCAAAGCGAGGGGCGAAGAAGTTGCGGACCCCATGGAGTCTTTCGGGGA
CATGCCGGCCGCCGGACCTGGAGACGACGCGCGACAGACAAGGCGCGTAA
TTCTGCGGAATGTGGAGGAGTCCGCATGGAAAGAACCAACCCCTGTTCAG
ATGCAAGCCGTGCCAATCCTTGTTGCCGGTCGGGACTTGCTGGCAGCGGC
CCCAACGGGCTCGGGAAAGACCGCTGCCTTCGTCATGCCGATGATCCTCA
GATTGGGGGTGCAGCGAGCATGCGCTGAGGCCTCTGGTGTGCGAGGCCTC
TTGCTGGCCCCAACTCGGGAGCTTGCTGCCCAGATCCATCGCGATGTTGT
ACGTCTCTCGCGCGGACGAAAGCTGCGCGTGTGCTTGCTGACGAAAGCAG
GCTCAGCGAAGGCGGCCGCCGCCACGGGCATGGACAGTAAGAAGGCACTT
TCGGGATATGATATCGTCGTGTCGACCCCTTTGCGGCTAGTGGCTCTCGT
GCGGGAGGGGGCAGTGTCCTTGGTGAGTGTAGAGATGGTGGTTCTGGACG
AAGCCGATAAACTATTTGACGCCGGGACCGTGGGTGGTAGCAACGACAAA
GCTTTCGTGGGACAGGTAGACGAGGTGCTGGCGGCCTGTTCCAATGAACA
AGTTCAGCGGGCTTTGTTCAGCGCCACGATCGGACAGCAGATGTCCTCCC
GCGAGCTACTCGAGATGCTAGGGAGTGGTGCGGCGTTCGGGAAAAAGGCA
CATCAGCCGAGCGAGCGACGAGATGCCGCGAAGAAGCCCCCGTCTACCAT
CAATTTCTTCGCTGCTGCTGCCGGTGGTGCTCCCAGCAGTTCCGCTGGCA
AAAAGAGGAGGCGGGCACCCAATGATGGGGGCAAGGCAAAGCCTTCTTCG
GCAGGAACGAGTCAAGTACTAGTCAGCAAGGCCACCTCGAAACCGGCTGC
CCGCGCATCCTCCAAGGGCAAGGGCGGTGGTTCAGCGTTGGCGTTGTTCG
CACCGACCCCAGCGGCCAGCGCGTCCGCAGGCAAGTGCAACAGCTCAAAA
GGTGTCGTCGAGGGCAAGGTGTTGACAGGAGAAAGGAAGGCTAGGTCTGT
TCGCGTGGAAGAAATCGCCTGCTTTCGGCGAAGGATGGGTATCAAAGCGA
GGGGCGAAGAAGTTGCGGACCCCATGGAGTCTTTCGGGGACATGCCGGCC
GCCGGACCTGGAGACGACGCGCGACAGACAAGGCGCGTAATTCTGCGGAA
TGTGGAGGAGTCCGCATGGAAAGAACCAACCCCTGTTCAGATGCAAGCCG
TGCCAATCCTTGTTGCCGGTCGGGACTTGCTGGCAGCGGCCCCAACGGGC
TCGGGAAAGACCGCTGCCTTCGTCATGCCGATGATCCTCAGATTGGGGGT
GCAGCGAGCATGCGCTGAGGCCTCTGGTGTGCGAGGCCTCTTGCTGGCCC
CAACTCGGGAGCTTGCTGCCCAGATCCATCGCGATGTTGTACGTCTCTCG
CGCGGACGAAAGCTGCGCGTGTGCTTGCTGACGAAAGCAGGCTCAGCGAA
GGCGGCCGCCGCCACGGGCATGGACAGTAAGAAGGCACTTTCGGGATATG
ATATCGTCGTGTCGACCCCTTTGCGGCTAGTGGCTCTCGTGCGGGAGGGG
GCAGTGTCCTTGGTGAGTGTAGAGATGGTGGTTCTGGACGAAGCCGATAA
ACTATTTGACGCCGGGACCGTGGGTGGTAGCAACGACAAAGCTTTCGTGG
GACAGGTAGACGAGGTGCTGGCGGCCTGTTCCAATGAACAAGTTCAGCGG
GCTTTGTTCAGCGCCACGATCGGACAGCAGATGAAAGAGCTAGCGAAGAG
CGTCCTACGCGATCCAATTTTCCTTACGGTGGGTACCGACAACGCTGGGG
CTGCAGATATTGACCAACGCTTGGTGTACGTCGGCAAGGAGGAAGGCAAA
CTTCTGGCCATTCGGCAACTGGTTCAAGAGGGATTGCGCCCTCCTGTCCT
TGTGTTTCTGCAGTCCAAGGACCGAGCCAAGATGAAAGAGCTAGCGAAGA
GCGTCCTACGCGATCCAATTTTCCTTACGGTGGGTACCGACAACGCTGGG
GCTGCAGATATTGACCAACGCTTGGTGTACGTCGGCAAGGAGGAAGGCAA
ACTTCTGGCCATTCGGCAACTGGTTCAAGAGGGATTGCGCCCTCCTGTCC
TTGTGTTTCTGCAGTCCAAGGACCGAGCCAAGGAGCTGTTCCACGAGTTA
GTGTATGACGGCATCAACACGGACGTAATGCACGCGAGTCGAACCCAGGA
GCTGTTCCACGAGTTAGTGTATGACGGCATCAACACGGACGTAATGCACG
CGAGTCGAACCCAGGATCAGCGTGATGATATCATTCAGCGCTTTAGGACT
GGGGAGATTTGGGTCCTCATCTGCACGGACCTCATGGCGCGAGGCATCGA
TTTCAAGGATCAGCGTGATGATATCATTCAGCGCTTTAGGACTGGGGAGA
TTTGGGTCCTCATCTGCACGGACCTCATGGCGCGAGGCATCGATTTCAAG
GGTGTCAACATGGTGATAAACTACGATTTCCCGCAGAGCGCCGTCTCGTA
CATCCACCGCATCGGACGAACTGGGAGAGCCGGCCGCCATGGCGTGGCTG
TGACTCTTTTCACCGAATCGGACATGGACTATCTTCGCAGCATCGCCAAT
GTCATGCGTCTTAGTGGGTGTGAGGGTGTCAACATGGTGATAAACTACGA
TTTCCCGCAGAGCGCCGTCTCGTACATCCACCGCATCGGACGAACTGGGA
GAGCCGGCCGCCATGGCGTGGCTGTGACTCTTTTCACCGAATCGGACATG
GACTATCTTCGCAGCATCGCCAATGTCATGCGTCTTAGTGGGTGTGAGGT
CCCAGATTGGATGCTAACCATGAAAAAGGAGAGGCGATCTGACCGACGAA
AGCGCGAGCAAGGAGCTCCTCGTCGCGATCAAATCGGCACTGTGTCGAAG
TACGATGTTCGACAAAAGCGCCGTCGGCAGTTCATGGTCAACGACAGCAA
GAAGGCCGCAGCGCTCGGCAATAACTGAGTCCCAGATTGGATGCTAACCA
TGAAAAAGGAGAGGCGATCTGACCGACGAAAGCGCGAGCAAGGAGCTCCT
CGTCGCGATCAAATCGGCACTGTGTCGAAGTACGATGTTCGACAAAAGCG
CCGTCGGCAGTTCATGGTCAACGACAGCAAGAAGGCCGCAGCGCTCGGCA
ATAACTGA
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