mRNA_C-linearis_contig9.16469.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig9.16469.1 vs. uniprot
Match: D7G2X1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X1_ECTSI) HSP 1 Score: 3220 bits (8349), Expect = 0.000e+0 Identity = 2408/5182 (46.47%), Postives = 2949/5182 (56.91%), Query Frame = 1
Query: 274 MDVWALALGVDIKRSKATDRARRKVELEEAGHSTEPGRWTPPVPPTTAPYQSVLGNHRRKRGRDALVGSAGSRRSPVVPEVAALDGFLSDLQQRLKSVEGGAVRSSHSTVVPTPTSSVAVAGTGGRYDVATAVSLASLVDVYGIPQTFVANAEEARRQWDSHHANLEKRDEEFLDRYKRSARMSGGQVSIAKAWRGFVFRRKFLAWKGRRQWSLKLHLRAWCLASSAERLYSGNLKRSVFTHWSEIVEEDRNTRVMGELSFQAAVSSTRLSRQAVVQFFQDHSSSPDDLSPAVLRNKASVKRRILKILFQSWRNAANLKQKAAAQAAFKMCKAVRLHTASAMLWAPEIVSLLFQVWSRMVLYKKAVREEREPPTFLPENGYASLPEWDAWVANKGMHLEMKRKVIHTGGQ---------------------------------------------------IFMRNKFRRWVWFAKWSLSEEDRFLEASQQHYDAIKVTKVFAAWAGLCRDRGSMLRRITRCWQGWGSFTRRRKKANMLKKKTVEHLRLLRTGSVMNDITAYARDGKVLSAFTVSKLLLTNKCFGGLALSYIATGRVTQLFALLAWQAWKKYTTKRRRWKWLLYEHTRTEALHSKQAVFKAWSYATGRRYRPDAASLTLSASLPFSTWDRFVKNYVDQGVVPAEQLHKDMVDHSVMQQHTAWWLLGQTGTGDANLKASGPGGGEGGFGR----PS----GRMELPQSGASXXXXXXXXXXXXXXXGKGPAATDWQALTPALFAAVDECDTTAVIDLLHRGAQVSSIYVPPKLA--STGGIDASRKKAAVNKQDEGSSPTGSDMLEPFRALDLPAPALVANQDGTFEMRGTTPLHAAAGHLSADFTSIVIALLHAGACVDALDAEGRTPLQICTSPQTVALLSAHAARLQQFRLSSQELHWGQQVLTSSRSGVGIAGLWRYAVRAAVVARLDKLRATLRVEDARAEDAATEAGRRMQQQQQLGLSAITSAGMVW*GSGGYTSAAD-----VGLDEREKELIRMKMERLEAAKTIVDREHALHSGTAGPPSTSXXXXXXXXXG--SIGVSAND-HARGNKRTGKERTAADHRKTFSARRADAASWFRAFREDLARAGMLRPKAESSTSSTSAGSTARDGSV------AKKVLAIVRDAGGENRNSGT--GAGRXXXKGGV----RLNSTVLGGGAAGGSMLGRGGNTSGTDAFTITEVNDCYMALGSVLDERKRAVDQRAARDDALIERGDWVGLQRAMEASK-HGQQDVPSTPSSKRRKNTRKKRATPSRSLSPMTSATD-SASGPTSVGASTGTPLTGSLRYG-------------CAGGYPEEEAQDN-----ASKELAIDVIPTSSSKRCHSTSVMLRGTVDSEVLGRAHRTIAVWKKRSGECEGGGSAGRTGTYGRLADERSSTFGRGIMSRVPHEWWGQDGGRVLALMLEERRKLRHKGYIAGNTRSARPSATLPLRRRRARHAFEKTWKGKTCTNFEHPDLWQAKIQQAQRKIRAIAKRRVSIADQENEEEVTPETLRRDIDAKRELIMSLSAKERQSTETIEKARVQLEESRVYLLRIQASDFLHSILTKYASYNMGKMDTLEKKFQECFRQQGITKNRQKVLGTGAKKRNRQAKKHKTASSIKTTTATDASAGGAGSATTSSGIKPKPIAIPPSSVEEGEADPLITPAAWPAEGTPGASVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQSGSGTAAEQVDQE-------------------DQEHPSDADGRAVDAPSVL----------LLRLAEEERLAEVRAARKAKELAEEEECRRKWDEEDAEELEAWRARREVEEVLEISPNLSKGDTLRLLTAQYDQALKQASYRTFEPERRAAVAKRIALVEAEQREKERKAQEVRPEEKRTPEDQLSEGRESNPAD-KGVFDEQAADISHLLDDPGLGLTREEIETLFDIVDEGDREAAKRMVSDGAEDGDGGXXXXXXXTTGKRHSRPGVRRADRGLILFLRKRGLRRSSTDPLENPIDALNSSPRPRPALKPELDDYMMLNFVGGSSGAKDGEDKDPSAT---TRSNKRAHTPESGGGGDGDQVHEDDESSETAESAMWRGRGNTYNEEVLCRGALNK-----LEPANADGDNAPQQGSAHEKL-DAADRTTDGGDEAHLYPRTVGTSVSVLDEKDAVLRTGGLRFAGEDPIRGRLRATDPFLWMGRLNAGTNAISGLIDKANDSLKSFDGGSGGSDSEISDGRS-------SGHQRVDRMQDIQSSRKEVVGPSSRGRDNLTNERVGKRGGEGEMAATQQIGKLGSMAENFSERGGTENDSEEEGDPGEIDRSCASSEHVSNSDVAMEQLSSTMSAYSQSMEENRVIAGXXXXXXXXXXXXXXN--ERAEHDPDNRSKEI-NAAGQRKGPGAGSGPSPMRASPVNARSAALGSSAKLRNKDTGVGKAKMAAVLDS-------SSSSGNGQQTSYNSTEEATTPTGREVWGEDESQDIHFDDIVSGIVRDVASRAPPTPWQSGEAVGVSRTDVMRPSWSAQERVSPTLRQRDGTNPESMGWKRRRPRSTPAGLRARAEAASTVLDPRPPWSLPLDSVFAPRVKGVIQPNIVTASPRRRFSEAD-SQAMGARDGQQQQGMPPRGRSLVVRGSSALRRPRLTGSSRLGIPTGIASSGLFRSASSVASQGTGRQIGSAPDGSVTQDEDHSADERPQDIRRCHSASEALLESGLLQEAPRLDDAPAATDGIWSWGWHDDGGQEQ-PSTAASRDTFTPLLTPELCKRAGRLGLRGTSPLRKKGKSGDALSFEKPRS-SKAPSLLWHSRNHFN--------PVDSDDAHGGGGSTRPWTTGELADNDSSDGATTAGTGAFLQYEGGMQSRARSAGGVTLSSHPVDSD-LRNAAEGPDDAVDLLDAKADGLVGSVEEGVSKNTSDFFRTIGADGQREQGKNLEEGGGIDGAAVDDDDGENSEFPGVPSQQMPRRVSFADEQGNSDGSXXXXXXXXXXXQRRARRGSQRRRMSSLVGNSDGYLKGDGSINGQLIDNNGRRKSDLERCRRAMEIAKVAHDLLFLDTRPDGLRPITGTPMNDGKNVQGSGGLYVGLAGLRGFDLSFVGAVPTNPSDTRQSLGSVAARLAANRQLSAYAAATI-----DDEGLGAGGARPSSPGTPTASSSKADASWIAQGFLLDRKPGSLMPRLPRSASRAPAAEMGQAPPTKNNS----------------SNSEVNDDVLTSR----SPEAAESKSESPLSPVPRSNVQQARKSATEDGNNAAKGSSSCSASLLAKEGSPRTQDARDGREQIGLGGE--------------ECGRSSRGEGAGSEFEGKSEAPAPEVPSGTTMVSCAATAMASLFIPKAAVLWSARDLGVDELVFSVAGDQQVLRPPGSREYTSRALLAAYKQANPVFEVEASGWSKREGAVAGVDYPLQPPDGWVGASPD-FGEREKGVSNISDSERQGVWKSFERRPISRAEARALREVRLSRGIRNEARGSGARSAGVGESAIRMIMPELSSDGSVSTSRG-TTEDNASHIGSLSDSTSAMSANTIYSLLHQPLSETTHPKCRGKTPTVGAGSNTSSNVSAPSSAGHEEHRR-SRSRSGRPSSPLPGNKSSEDGAESMPAPSSLGKIAPPWASDLYHDQNNEAPPERLIAGGVRSGGEGLSPSPKIVPPPNQKSATDPTSLLRL----GLSSESLFRLNGEADANSVLRAMVRLS--STPSTGTSKGNGEKRGLPSHHTSGGAPGKRPAASGDHSRNNNGTAPVAPAASASRIFWPAEAGSH-GVCRGNTPSIKSG-----RGHTTNAVGSPSPATQESVLDIEGRPFQSGARVRRDGLASSRASERFDVARHGDPVEGLNIERSGREPAPQMGQRRRSSHDKVRVKAGGRKVFVLSESQSEPSGLDQ-RTKQRPLSSNIGGGGGREDAGSRMSTESLLQTLSSSGLTRQGSILSLAVS-STSGASQQPPISASNGALGGQGFGLRSESIGGASDESRRGTASRSEVAXXXXXXXXXXXXXXXNRLHAITKAAVHEDPAGG-----------KPLSGSKIKVRTE---DHSTARGSVITKRNTLVGKEPCITVD-----------GTDDGXXXXXXXIKTSRKLSEIIAGVTSDAAAFVVPPRRDSRANVPLVSEETGQSLSPA-----------------EDVVETSASTSTAAIEPPQRSPLTTEKAVTVETFGGVRAYSDRSNAATSGATASQREGKSAARRIDNRPEIEGGARRVRGGGRG-ANGSATTASSSLRLAGGASPKNNSRPGKLSSHHPRQPMGVTTPERNGAAETRAAGSVTDMGTIAKLQATMTPDAGGGREEGSPAKDDGASRAG-------GL---AIGTAAPYPKVESREIPS---ETSGDNGKLCSDVRRSHYGKGASSSSRSGNN-------------------GERTNRTGGGSPNSQGSGASRPSSNRGDINARSSPSPQIRQEIFDDKKSGAVSRKTTHTEEARPLEDVTCNDTCPEASLPRLDKPEAIAAAT-GAQQDVRQHSSIAEENQPPAATASPENVVEPQKLPRISG---AGGGRSKTAGQ-------HVIKVNSRPARMESKDLQTTTEALTTHHLTVDELLKGGYDELLDDSEDEDDVGDRRVKTRKEPLLIPHGARMSGMAYWQEREAKEREQRRQPRSAAHDHASIGDELGAIRASGSGNGDGGDAERLQTGGNGQWEDEKGEINRLLLAARVRREAAVARVRAQREQARLDSEQEILAVAAMAEAPAPASANEKLPANKVMMLTGVGGPAAAAKSGDGKGTLGRAALFPSTATVGGEVGRDRSERTRGEAPPWKGFTLSDDGEAMLRRGRIPSPERQSPVEGAEDWEYQLIVPGTKDNLVNFSVDTATVRTNYGKLRRRVEIRQRLGLDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSVFSAERGGSSGNPSTDMPEISIRRRTRVAGQGVRGDESNAAESP-PSNDP-GTIARASRIIMELEQDHGDLEFPLDALRRDRGFGDYDHGD 14880
MDVWA ALGVDI SK+ +RARR+VELEEAG T PG WT PVP TT QS+L RR R RDA G+AG RSPVVPEV AL+GFL+DLQ RL S+EGGAVR+S STVV T SS A AG GG + S A L D+YGIPQ F+ NAE+AR+ WD H ANLE RDEEFL RYKR ARMSG QVSIAK WRGFVFRRKF+AW+GRRQWS+KLHLRAW + A RLYS NL RSVF+HW+E+VEE+RN RV+G+LSFQAAVSSTRLSRQAVVQ+FQD S+ DDLSPAV RNKASVKRRIL+ILFQ WR+ AN K+KA AQA FKMCKAVRLHTAS MLWAPEI SLLF VWSRMV +KKA+REE EPPTF PE+G+ LPEWD WV+ +G HL ++ +V TG Q IF RNKFRRWVWF KWSLS+E R +EASQ H+D KVTKVFAAWA +CRDRGSMLRR TRCWQGW FT RK + MLKKKTVEH+RLLRTGSVM+D+TAYARDGK+LS+FTVSKLLLT K FG +AL Y+ATG++TQLF+LLAWQAWK+YT +RRRWKWLLYEHT+ EA H++Q+VF+AWSYATGRRYRPDAASLTLSA+LPFSTWDR +KNYVDQGV+P EQLHKD+VDHSVMQQ+TAWWLLGQ + + ++ S G G PS RMELP+SGA +GPAA DW+ L PALF AVD+CD V+DLLHRGAQV+ +YVPP+ A S GG+ S++ + KQD +GS +L R LDLP PAL+A DGTF+MRGTTPLHAAAGH S D+TSIV+ALLHAGA V ALDA G+TPLQ+CTSPQ A+LS HA RLQ + S QEL WGQQ+LTS R G G GLWRY VRAAVVARLDKL A LR ED RAED ++EA + GM S G T+A+ GLDEREKELIRMKME LEA KTIVDREH LHSG G P SXXXXXXXXX SIGVS D HA N+RTGKERTAADHRK FS RA+AA WFR+FRE+L RA ML P+ +T+ TS TA V AKKVLAIVRDAG ++R+SG G R +GGV +LN V+ G GG MLGRGGNTSGTDAFT+TEV+ C+MAL SVL+ERKR +D+R ARD+ LIERG+WVGLQRAMEASK HGQQD ST SSK K R KR R+ T SA G +S+G S+ + TG RYG GG E Q+ A+ EL IDV+PTSSSKR H+ SV LRGTVD EVL RAH T+A WK+ S E GG G RLA R ++ RG+MSRVP WWG+ G RVLALM E+RRKLR KG AG+TRSAR SAT P R+ RA+H FE+TWKGK WQ KIQQAQ KIRAI K+R +A+Q+ EEEVTP+TLRRDIDAKR L +SLSAKE+Q IE A+VQ+EESRVYL+RIQ SIL+KYASYNMGKMD LE++FQEC RQQ T+ RQ +GT K + R K+ K S KT TA + G T +S P PI IP S E +PA WPAEG S+ XXXXXXXXXXXXXXXXXXXXXXXXX + + T A +++ DQE + A + +V+ ++ L E E+R A++A++LAEE ECRR W EEDAEE EAW A R E+VL I P LSK + +RLL QY+QAL Q TF+PERR A+A RIALVEAEQRE D + +E+A DI HLL+DPGLGLTR+EI+ LFD+VD D A + S+G + D +R R A RGL+ FL++RGLR+ S +PLE PID L+++P+ RP LKPEL++Y+ LNFV G +D++PSA T S R + + G GG G V++ + ++ + A+WRG Y G + LEP G G++++ + AD +D +E LYPRT+G+SVSVLDEKDAV RTGG RF GEDPIRGRLRATDPFLWMGRL+AG AISGLID+A +L DGG DS S G S ++RV+ + D V GP+ G +N + K+ +G A Q++ + R G N +E G G+ + SS S+ A+E +SSTMSAYSQ+ME NR+IAG + E +H ++ KE+ RK P AGSGP PMR SPVNARSAALGS AKL DTG+G+ K + S SSS GN TS+ +T+ AT T E WGEDESQDI FDDIVS I+R+V SRAPPTP G + +RP WSAQER SPT RQRDG + + + RRPRSTPAG RARAEAA+TVLD RPPWSLPLDSVFAPRVKG +QP+++ A RRRFS+AD S G +QG+PPR R+LVVRG+SALR R ++ + GI + R SS G GSA QD D SA+E P +RR HSASE LL+ GLLQE P +D PA DGIWSWGWH+DGGQE P TAAS D FTPL+TPE+CKR+ R GL GTSPLR +G A F RS ++APS + +SR H + P + +H GG TRPWTTG+ + +S A G Q GG+ RA SA LS H ++D L AE P + A DG E + K +D D Q G+ GG++GA D + E E PG QQMPRRVSFADEQ + ++R G+QRRRMSSL+G S+GYL+ DGSINGQL D N RRKSDLERC+RAMEIA+ AH+LLF DTRPDGLRPITGTPM DG+++QG GGLYVGLAGL+GFDLSFVGA+ ++ S R++LGS ++RL ANR LS AA +D + PS P AS ASWI +G LLDR+PGSLM R P S AP++E + P + +S S D +T+ SP AA S + SP A++SA+ G + + A +L D DG + GE E + + E SE + KSEA E P T +VS AA AMASLF PKAAVLWSARDLGV++LV S AGDQQ R P SR YTSRALL AYKQA PVFEVEAS W KREGAVAGVDYPLQPP GW G S + K +SD +RQ K+FERR +S AE GSG G G+ + P SSD S STSRG EDN S + S++D++S S + L + +G G GS +N S G E+HR+ +R SG + + ++ +E S A S+ G + P DL Q + +GG+RSGGE V P ++S P+S L L +++ES FRL+ EADA+ VLRAMVRLS STP TG + ++ +H GG R +R G AP +R PAE S G+CRG+TP IKSG + N P P +++VLDIEGR +S R G S +ER +A D + SGR APQ GQR + V A GR VLSES+S P Q R+ L ++D+G R STSGAS+Q +S+ A+ + R ++ SD+ RG++S+S V + + E P+ G + G K R+E D ++ T V + C+T D G T ++S IIA VT DAAA V+ LV+EE + L PA + A+ S + P R T V R + + T +++R+ K A++ +RPE+EG R RGG G N SA+ SSS P+ + G SS + G + N E A+G+ TD A + G G EE SPA + ++A G+ A T +P +V++ +PS T G S+VRRS G+ +S +RS + R+G + ++ +G R IN+R++ P R++I +K GA + + SLP L K E GAQQ +Q S+AE Q T E ++LPRIS AGGGR KT+ I V+ RP R+E++DL TTTEALTTHHLTV+ELLKGGYDELLDDS+ +++ RV+TRKEPL+IPH AR +GMAYWQ+RE KER +RR+P S H + G AS G+G + GG+GQWEDEK EI RLL AR RREAAVARVRA+REQA++DSE +++ AA P AAA G+ K G A PS+ T GE+ R R +G PPWKGFTLSDDGEA+LRR R PSPE SPV+G ED EYQLIVPG KDNLVNFSVDT VRTNYGKLRR VEIR R+G+ E+ + + ER S + S +PEIS+RRRT GV+G + AE+P P DP GTIARASRI+ EL D ++ PLD+LR D GF + D+ D
Sbjct: 1 MDVWAQALGVDIDSSKSAERARRRVELEEAGLRTVPGAWTLPVPRTT--NQSLL-PRRRPRDRDAPGGAAGRARSPVVPEVDALEGFLTDLQGRLTSLEGGAVRNS-STVVSTR-SSAARAGHGGDVTLGATPS-AGLADIYGIPQAFIDNAEQARQHWDVHDANLEMRDEEFLQRYKRRARMSGVQVSIAKTWRGFVFRRKFMAWRGRRQWSIKLHLRAWRVTVRAHRLYSENLMRSVFSHWNELVEEERNARVVGQLSFQAAVSSTRLSRQAVVQYFQDTSTPSDDLSPAVRRNKASVKRRILQILFQGWRDTANHKRKAEAQAGFKMCKAVRLHTASNMLWAPEIASLLFHVWSRMVKFKKALREEMEPPTFPPEDGFKPLPEWDTWVSTRGRHLALELQVKKTGSQYCLLASDSVACLGWPIATGYPGFVRLHRGQWRRADSRPNDVAAAFAGLMAQIFTRNKFRRWVWFTKWSLSQEQREIEASQ-HHDVHKVTKVFAAWASVCRDRGSMLRRTTRCWQGWKRFTSSRKISKMLKKKTVEHIRLLRTGSVMSDVTAYARDGKILSSFTVSKLLLTTKFFGAMALGYVATGQITQLFSLLAWQAWKQYTVRRRRWKWLLYEHTKAEAFHARQSVFRAWSYATGRRYRPDAASLTLSAALPFSTWDRLLKNYVDQGVIPMEQLHKDLVDHSVMQQNTAWWLLGQD-SAERPIRDSSSAAVLSGLGTSEEDPSRGGESRMELPKSGAGGGGVRGRLSRHGVS--EGPAAVDWRTLAPALFVAVDDCDEAEVMDLLHRGAQVNCVYVPPESAPLSDGGV--SKRSRGITKQDRNGGESGSGILGVGRILDLPPPALIAQSDGTFQMRGTTPLHAAAGHFSGDYTSIVVALLHAGASVGALDAAGKTPLQVCTSPQIAAVLSEHANRLQPHKFSPQELRWGQQILTSERHGCGATGLWRYVVRAAVVARLDKLSAALRAEDTRAEDDSSEATHQXXXXXXXXXXXXXXXGMAAGNSFGTTNASTGAAGATGLDEREKELIRMKMENLEATKTIVDREHVLHSGGTGAPGGSXXXXXXXXXXXXSIGVSRGDNHATSNQRTGKERTAADHRKAFSVYRANAAGWFRSFREELIRANMLSPRG--TTAQTSVVDTAAHAGVTAEKNTAKKVLAIVRDAGVDSRSSGASPGGSRGVARGGVGGGGKLNPMVMSVGGGGG-MLGRGGNTSGTDAFTMTEVHGCFMALSSVLEERKRVMDRRTARDNGLIERGNWVGLQRAMEASKQHGQQDAHSTASSKSGKRRRNKRTLSGRTHHTATXXXXASADGSSSLGPSSSSTATGGHRYGDLVHEEPDSGLGIVVGGMAGEGVQNQQEDRAAAGELTIDVLPTSSSKRYHAASVALRGTVDIEVLRRAHLTLAAWKRESVTDEPGGDFGT-----RLAQARRTSVSRGVMSRVPRWWWGRGGERVLALMREQRRKLREKGSTAGSTRSARLSATSPWRQGRAKHGFERTWKGK--------GKWQNKIQQAQGKIRAIVKKRTIVAEQDKEEEVTPDTLRRDIDAKRALTISLSAKEKQCVNNIESAKVQVEESRVYLVRIQ------SILSKYASYNMGKMDALEREFQECSRQQENTRARQTTVGTTRKGKKRHPKRLKPVGSTKTHTAATSKPG-----TPNSKEIPHPITIPTPSAGEVVPGAPTSPAPWPAEGEAAGSLSARLHPAVDPSVSSASPTMAVKSSLPERRENTQQLPSQXXXXXXXXXXXXXXXXXXXXXXXXXASPRNGRKVAKTVAIGTNRKAIKEGRGGIVAVALMEAVGDQEQTEQTEQNAGENATVVEGVTELAKESMMGLTRAEHEEELRQAKEARDLAEEAECRRIWGEEDAEEQEAWGATRGAEDVLRIDPELSKEEVVRLLATQYEQALNQ----TFQPERREAIANRIALVEAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGEAPTEEKAGDIGHLLNDPGLGLTRQEIDALFDLVDGHDEPAGGHLGSEGGAESD---------AAARRQ-----RLATRGLLRFLQRRGLRQPSMEPLEAPIDVLSNNPKARPHLKPELENYISLNFVEGGVTGNKNDDEEPSAASSRTLSGGRDNGQDRGDGGGGAGVNDGSDGNQEEDGALWRGSTGVYTGTKTPNGTADSPPAPSLEP----GSTTDPSGTSNKAVAQDADECSDS-EEMLLYPRTLGSSVSVLDEKDAVRRTGGARFTGEDPIRGRLRATDPFLWMGRLHAGATAISGLIDQAKGALDGLDGGGSDGDSVTSRGXXXXXXXXXSDNRRVEGLVDWGEG---VAGPTLAGGENTS-----KQWMKGGAAGEQKVDEGWQTVGEDDGRAGGHNGEDEHGSDGKTHVTHTSS----GSNSAVEHISSTMSAYSQAMEANRIIAGGVVLEGEQEEDHENDGDETQDHPSSSKGKELFGLRDMRKRP-AGSGPCPMRTSPVNARSAALGSLAKLGKIDTGLGRPKNTLPVGSRTFDIVSSSSGGNDPTTSWEATQ-ATYSTRGEEWGEDESQDIRFDDIVSSIIREVPSRAPPTPRSPEGVGGTGGHEAVRPPWSAQERTSPTRRQRDGASWGPVEEQGRRPRSTPAGFRARAEAAATVLDRRPPWSLPLDSVFAPRVKGAVQPSVLMAPARRRFSDADGSVGGGISHPPPRQGIPPRSRNLVVRGASALRWQRRITTAPSDMSCGIVPFEMSRRMSS----GEAGAAGSAGAAVTLQDHDPSAEESPHSMRRSHSASEVLLQCGLLQEEPPVDKPPAMADGIWSWGWHNDGGQETLPPTAASEDLFTPLVTPEICKRSTRTGLGGTSPLRSTRNNGGASLFGGSRSGTRAPSGVPYSRTHSHATQGSKVRPKRASFSHDEGGETRPWTTGDFNEEESFAVGNAADDGNG-QGTGGLLRRAISAEDPFLSPHLANNDDLLTQAETPVEVAAQPTAD-DGSAPGGGESIEKIDADSVGLFAGDKQAAGGQ-----GGVEGATDDGINNEEVELPGDLPQQMPRRVSFADEQDPGLLADGRNSSGQRSGRQREGWGAQRRRMSSLIGTSNGYLESDGSINGQLFDINARRKSDLERCQRAMEIARAAHELLFTDTRPDGLRPITGTPMTDGRDIQGMGGLYVGLAGLKGFDLSFVGAISSSKSGCRRNLGSASSRLVANRSLSGSAAIVAAANNTEDSSVVDRNRCPSPNVVPGAS---VGASWIPKGGLLDRQPGSLMARPPASPDAAPSSEAAHSSPARGSSPSAMADVQHGGARLRSSGGVTGDPKVTTNGSGCSPNAASSSAVQQGSPP-------AKRSASAPGRGPSSAAGLLPADMLDIRSIGSGSDKSDGSRRKTNEGESENLCVNRRLGAKGETSEAPKNEDENSENDWKSEAGIQEAPPSTALVSNAANAMASLFAPKAAVLWSARDLGVEKLVVSAAGDQQAHRRPTSRNYTSRALLTAYKQARPVFEVEASSWRKREGAVAGVDYPLQPPAGWGGVSSNPRSAGSKSAVALSDEDRQAEGKAFERRLVSPAE------------------GSGG---GRGQG-FSLGSPPFSSDCSESTSRGGVLEDNGSLMSSIADTSSEGS------FFQEEL------RSKGWRKMPGGGS---ANAPKTWSKGVEQHRQQNRIPSGGLVAAIDNDRDTES-VRSTSASSTEGTMTPTTTPDLRLIQQDNDRHLLHASGGIRSGGESQPSVLSNVLAPPKESPLAPSSGLGLDSGPAVNTESAFRLSCEADADDVLRAMVRLSMASTP-TGAGSLDATRQSPQGYH--GGDASARAGVDERAARRRRGNGAAAPQVP-TRYLLPAEGSSSTGICRGSTPGIKSGHLGNRKPPYVNETACP-PDEKDNVLDIEGRMLRSVGGARSAGHPSQWRNER--LANTPDTRRSTKRDFSGRSTAPQHGQRP-NHRGTVAAAAAGRAQLVLSESESAPPATSQNRSSPSALF--------QDDSGRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGASRQL---SSSSAIFNRKSAAR-DAGDSTSDDRGRGSSSQSRVPIVGVGY----------------RGSKREKPSVGGTDGTIRFGVGQNEGGVGAKTRSEGALDDGSSTFIGPTDPEASVTQSSCLTFGEGGXXXGSMACDNDHGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEGIITTEASLVTEEAERLLPPAVAQKGADXXXXXXXXXXSSRLSPMATESEHLNQAPPRGDTTKVGREQVNKGPKSRGKITMTGSHTK---SNERKTKPASKPHASRPEVEG--RSGRGGVSGDKNASASVGSSSATAK--LKPEQEAPKGSTSSLRRSKEKGPASVRGNAGEEMLASGA-TDSAVTAGSPVDRSQGRGRGPEEASPADSNALAQAEVANKRETGIVREAQTTKSPLCQVDTSGMPSGAQTTIETKGNSRSNVRRSQRGQDSSRGNRSTXXXXXXXXXXXXXXXXXXSVVSRGSTRSGSHARGTEATGXXXXXXXR--INSRNASGPTSRKDI---RKGGATDAAASK-----------------KVSLPALAKSETTKTVQDGAQQQRQQDGSVAERVQASRGTEGSETADVHKQLPRISSGAAAGGGRVKTSSSAAGKTLHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDSDGDEETASHRVRTRKEPLMIPHRARPNGMAYWQDREEKERVRRRRPLSEIEGHGT----RGGAEASRGGHGGAVAGGMVAGGGDGQWEDEKEEIKRLLSEARARREAAVARVRAKREQAKIDSEGQLVRQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAAAMPGEDKRLPGFPAQGPSSTTERGEISRSRPNGVKGGEPPWKGFTLSDDGEALLRRRRAPSPEHVSPVQGREDSEYQLIVPGVKDNLVNFSVDTVAVRTNYGKLRRGVEIRHRMGIGEDGENTDPDDEDMPEANDDDGSPMLTIRAATDRLSGDLSSDFDYDSS--------APSTRERLLSRPSTSGAIPEISLRRRT-----GVQGGRRSYAEAPVPVVDPAGTIARASRIVTELRLDGENMMSPLDSLRGDVGFDNDDNTD 4964
BLAST of mRNA_C-linearis_contig9.16469.1 vs. uniprot
Match: A0A6H5JPP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP5_9PHAE) HSP 1 Score: 581 bits (1497), Expect = 2.410e-168 Identity = 661/1801 (36.70%), Postives = 841/1801 (46.70%), Query Frame = 1
Query: 8632 QYEGGMQSRARSAGGVTLSSHPVD-SDLRNAAEGPDDAVDLLDAKADGLVGSVEEGVSKNTSDFFRTIGADGQREQGKNLEEGGGIDGAAVDDDDGENSEFPGVPSQQMPRRVSFADEQG--------NSDGSXXXXXXXXXXXQRRARRGSQRRRMSSLVGNSDGYLKGDGSINGQLIDNNGRRKSDLERCRRAMEIAKVAHDLLFLDTRPDGLRPITGTPMNDGKNVQGSGGLYVGLAGLRGFDLSFVGAVPTNPSDTRQSLGSVAARLAANRQLSAYAAA-TIDDEGLGAGGA---RPSSPGTPTASSSKADASWIAQGFLLDRKPGSLMPRLPRSASRAPAAEMGQAPPTKNNS----------------SNSEVNDDVLTSR----SPEAAESKSESPLSPVPRSNVQQARKSATEDGNNAAKGSSSCSASLL----AKEGSPRTQDARDGREQIGLGGEECGRSSRGEGAG------------SEFEGKSEAPAPEVPSGTTMVSCAATAMASLFIPKAAVLWSARDLGVDELVFSVAGDQQVLRPPGSREYTSRALLAAYKQANPVFEVEASGWSKREGAVAGVDYPLQPPDGWVGASPDFGEREKGVSNISDSERQGVWKSFERRPISRAEARALREVRLSRGIRNEARGSGARSAGVGESAIRMIMPELSSDGSVSTSRGTT-EDNASHIGSLSDSTSAMSANTIYSLLHQPLSETTHPKCRGKTPTVGAGSNTSSNVSAPSSAGHEEHRRSRS-RSGRPSSPLPGNKSSEDGAESMPAPSSLGKIAPPWASDLYHDQNNEAPPERLIAGGVRSGGEGLSP--SPKIVPPPNQKSATDPTSLLRLG--LSSESLFRLNGEADANSVLRAMVRLS--STPSTGTSKGNGEKRGLPSHHTSGGAPGKRPAASGDHSRNNNGTAPVAPAASASRIFWPAEAGSHGVCRGNTPSIKSG-----RGHTTNAVGSPSPATQESVLDIEGRPFQSGARVRRDGLASSRASERFDVARHGDPVEGLNIERSGREPAPQMGQRRRSSHDKVRVKAGGRKVFVLSESQSEPSGLDQ-RTKQRPLSSNIGG--GGGREDAGSRMSTESLLQTLSSSGLTRQGSILSLAVSSTSGASQQPPISASNGALGGQGFGLRSESIGGASDESRRGTASRSE-----VAXXXXXXXXXXXXXXXNRLHAITKAAVHEDPAGGKPLSGSKIKVRTEDHSTARGSVI--TKRNTLVGKEPCITV-DGTDD----------GXXXXXXXIKTSRKLSEIIAGVTSDAAAFVVPPRRDSRANVPLVSEETGQSLSPAEDVVETSASTSTAAIEPP---QRSPLTTE---------KAVTVETFGGVRAYSDRSNAATS----GATASQREGKSAARRIDNRPEIEGGARRVRGGGRGANGSATTASSSLRLAGGASPKNNSRPGKLSSHHPRQPMGVTTPERNGAAETRAAGSVTDMGTIAKLQATMTPDAGGGREEGSPAKDDGASRAG-------GL---AIGTAAPYPKVESREIPS------ETSGDNGKLCSDVRRSHYGKGASSSSRSGNNGERTNRTGGGSPNSQGSGASRPSSNRGDINARSSPSPQIRQEIFDDKKSGAVSRKTTHTEEARPLEDVTCNDTCPEASLPRLDKPEAIAAAT-GAQQDVRQHSSIAEENQPPAATASPENVVEPQKLPRISG---AGGGRSKTAG-------QHVIKVNSRPARMESKDLQTTTEALTTHHLTVDELLKGGYDELLDDSEDEDDVGDRRVKTRKEP 13656
Q GG+ RARSA +S H + DL AE P + A DG E ++K D D Q G+ G +GA D D E E PG QQMPRRVSFADEQ NS+G G+QRRRMSSL+G S+GYL+ DGSINGQL D N RRKSDLERC+RA+EIA+ AH LLF DTRPDGLRPITGTPM DG+++QG GGLYVGLAGL+GFDLSFVGA+ T+ S R++LGS ++RL NR+LS AA T D A R SSP +S ASWI +G LLDR+PGSLM R P S AP+ E P + +S S D T+ SP AA S ++ SP A+K A+ G ++ + A +L GS ++ + R R+Q + E+ G + R G SE + +SEA E P T +V AA AM SLF PKAAVLWSA+DLGV++LV S AGDQQVLR P SR YTSRALL AYKQ PVFEVEAS W KREGAVAGVDYPLQPP GW G G W++FERR +S AEA+A REV +SR N ARGSG G G + P SSD S STSRG ED+ S + S++D++S S E K K P G S+N S G E++R+ SGR + L GN S S+ G I P A +L Q + GG+RSGGE S + PP AT L G +++ES FRL+ EADA+ VLRAMVRLS STP TG + ++ H+ G R +R G AP +R PAE GS G+CRG+TP IKSG + N P P +++ LDIEGR +SG R G S +ER +A D E SGR PQ G RR + V A GR VLSESQS P Q R+ L + GG GG +L L + LS SSTSGAS Q +S A+ + +R ++ G S + RG+ S+S V+ +H +E G K S + +D S G+ I T V + C+T +G G T ++S IIA VT DAAA V+ LV+EE + LSPA V + A T+ + SP TE + T++ G + T+ A + +R+ K A++R +RPE+EG R RGG RG +A + SS A +P+ + G S + G + N E A+G VTD A + GGG EE SPA + + A G+ A T +P +V++ + PS ET GD+ CS+ RRS G+ +S +RS N S SR ++ G + SG SRK T + SLP L K EA G QQ +Q S+AE Q T E ++LPRIS A GGR KTA I V+ RP R+E++DL TTTEALTTHHLTV+ELLKGGYDELLDDS+ +++ RV+T K P
Sbjct: 12 QGTGGLLRRARSAEDPFISPHQANHDDLPTQAETPGEVAAHPTAD-DGSTPDGGESIAKIDEDNVGLFAGDDQAAGGQ-----AGDEGATDDGIDNEELELPGDLPQQMPRRVSFADEQDPGLLTDGRNSNGQRSGRHWEGW--------GAQRRRMSSLIGTSNGYLESDGSINGQLFDMNARRKSDLERCQRAIEIARAAHKLLFTDTRPDGLRPITGTPMADGRDIQGMGGLYVGLAGLKGFDLSFVGAISTSESGCRRNLGSASSRLMVNRRLSGSAAVVTAADNTEDASVVEKNRCSSPNVVPGAS--VGASWIPKGGLLDRQPGSLMARPPASPDAAPSPEAAHYSPARGSSPSTMADVQHSSARLRSSGGVTGDPKATTNGSGCSPNAASSSADQQGSPP-------AKKRASAPGRGSSNAAGLLPADMLDIRSIGSGSDKSDELR--RKQYEVENEKLGVNRRLGAKGETSEATKRKDSKSENDWQSEAGIQEAPPSTALVLNAANAMTSLFAPKAAVLWSAKDLGVEKLVVSAAGDQQVLRRPTSRNYTSRALLTAYKQTGPVFEVEASSWRKREGAVAGVDYPLQPPAGWGG---------------------GEWRAFERRLVSPAEAKAFREVVISRRANNRARGSGG-DRGQG---FPLGSPPFSSDCSESTSRGGAFEDSGSFMSSIADTSSEGS---------YFFPEELRSKGWRKMPRGG-----SANAPKTWSKGVEQYRQQNQITSGRLVARL-GNGQDTKSVRSASTSSTEGTITPTTAPELRLIQQDNDRHLLHALGGIRSGGESQPSVLSYVLAPPKESPFATSSGLGLNSGPAVTAESAFRLSCEADADDVLRAMVRLSIASTP-TGAGSLDASRQSPQGFHS--GDASARVGVDERAARRRRGNGAEAPQVP-TRYLLPAEGGSRGICRGSTPGIKSGHLGNRKTPYVNETACP-PDEKDNFLDIEGRMLRSGGGARGAGHLSQWRNER--LAATPDTRRSTTREFSGRSTVPQHG-RRPNHRGTVSAAAAGRAQLVLSESQSAPPATSQNRSSPSALFQDDGGRRGGXXXXXXXXXXMAALESALRA---------LSATASSTSGASLQL---SSYSAIFDRKSAVR-DAGGSTSGDRWRGSCSQSREPIVGVSYRDSKQEKSSVDGTDGTIHF--GVGQNEGGVGAKAKSEGAL----DDGS---GTFIGPTDPEASVTQSSCLTFGEGXXXXXXXXXXXXRGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEGIITTGASLVTEEAERLLSPA--VAQKGAGTAXXXXXXXXSSRLSPAATESERLNQEPPRGDTMKVGKGPVNKGPKGTGKTTMTGIHAKSYERKTKPASKRHASRPEVEG--RSGRGGVRGDKSAAASVGSSSATA-KLTPEQEAPKGSTLSFRLSEEKGPASARGNAGEEMLASG-VTDNAVTAGPPLDRSQGRGGGPEEASPADSNSLAEAEVANEKETGIVREAQTTKSPLCQVDTSDKPSRGQTTIETKGDS---CSNARRSKRGQDSSRGNRSTNTXXXXXXXXXXXXXXXSSVVSRGTTRSGSHARGTEAMGSTGSRRSSRNASGPTSRKDLRKGGTTDAAGST------KVSLPALAKSEATKTVKDGVQQQQQQDGSVAERVQVGRGTEGSETADVHKQLPRISSGATASGGRFKTASAAAGKIPHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDSDGDEEAASYRVRTPKVP 1702
BLAST of mRNA_C-linearis_contig9.16469.1 vs. uniprot
Match: A0A835YQM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM2_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.110e-35 Identity = 144/571 (25.22%), Postives = 225/571 (39.40%), Query Frame = 1
Query: 859 GFVFRRKFLAWKGRRQWSLKLHLRAWCLASSAERLYSGNLKRSVFTHWSEIVEEDRNTRVMGELSFQAAVSSTRLSRQAVVQFFQD--HSSSPDDLSPAVLRNKASVKRRILKILFQSWRNAANL-----------------------------KQKAAAQAAFKMCKAVRLHTASAML-WAPEIVSLLFQVWSRMVLYKKAVREEREPPTFLPENGYASLPEWDAWVANK------------------GMHLEMKRKVIHTGGQIFMRNKFRRWVWFAKWSLSEEDRFLEASQQHYDAIKVT---------------------------KVFAAWAGLCRDRGSMLRRITRCWQGWGSFTRRRKKANMLKKKTVEHLRLLRTGSVMNDITAYARDGKVLSAFTVSKLL-------------------------LTNKCFGGLALSYIATGRVTQLFALLAWQAWKKYTTKRRRWKWLLYEHTRTEALHSKQAVFKAWSYATGRR--------YRPDAASLTLSASLPFSTWDRFVKNYVDQGVVPAEQLHKDMVDHSVMQQHTAWWLLGQ 2241
G+V R++FL W+ RR+ L RAW A A+RL++ + R ++ E +E+ + + + +A +L+ AV FF++ + + VL RRIL++L W+ + +Q+ + AA + L AS M+ W+ E++ + F +W RM + A+R RE P F A + D W A G L+ K + GGQIF+RNKFRRW + +W + R A + +V W CR +G M R + RC+ W + +++ K ++H+R LR+ + + A D +++L CF Y T R L A WQAW++ +RRRWKWL YE R +H + V +AW +ATG+R A + L A++PF T D+ + GV+P +QL +DM VM Q T+ WLLGQ
Sbjct: 45 GYVHRQRFLTWRARRRQRRALFFRAWRAAVLADRLHARFILRKYWSLLKEALEDRQRMEKVLRAAVEATAGRHKLTFAAVNLFFRELERTEAHGARKEQVLLTHVGTGRRILRVLVDGWKARVHAAVVXXXXXXXXXXXXXXXXXXXXXXXXXARQRRSTAAALVLRVTRELQHASRMVAWSLELLLVGFHMWRRMAAFTAALRLGRELPNFGKTPPCAK--KRDKWAATTVEAHXXXXXXXXXXXXXTGRRLQRKHAINVKGGQIFLRNKFRRWAVYVRWCRARGQRMSAAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLKGWHNTCRTKGQMQRVVQRCFAAWRRWAPLHQRSAAAKAAVLDHVRALRSERALLAMHRLASDAHARDQAAAARILDAPIFHVVAQAAXXXXXXXXXXXXXXXXXCFA----MYSDTDR---LCAFTCWQAWRRTAVQRRRWKWLQYEQRRVAGMHLCRTVLRAWYFATGQRPFQVVNGTLTASAGTPALLAAIPFGTLDKLC-TVLGHGVLPTKQLKRDMSSGGVMAQETSKWLLGQ 605 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16469.1 >prot_C-linearis_contig9.16469.1 ID=prot_C-linearis_contig9.16469.1|Name=mRNA_C-linearis_contig9.16469.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=3896bp MKMERLEAAKTIVDREHALHSGTAGPPSTSGGGGGGGAGGSIGVSANDHAback to top mRNA from alignment at C-linearis_contig9:289779..325166- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16469.1 ID=mRNA_C-linearis_contig9.16469.1|Name=mRNA_C-linearis_contig9.16469.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=35388bp|location=Sequence derived from alignment at C-linearis_contig9:289779..325166- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:289779..325166- >mRNA_C-linearis_contig9.16469.1 ID=mRNA_C-linearis_contig9.16469.1|Name=mRNA_C-linearis_contig9.16469.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=23376bp|location=Sequence derived from alignment at C-linearis_contig9:289779..325166- (Chordaria linearis ClinC8C monoicous)back to top |