mRNA_C-linearis_contig9.16467.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 1.480e-134 Identity = 187/214 (87.38%), Postives = 203/214 (94.86%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
KKYNVELLRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANRKNGVSKEE+ASVTR +FK+++P+KLEEKAE+YMREKGWGLIWTPPYMPTFQPIELFWQHGK YVSIHFEKGRN+LDVWKQ+RLGWYGDP+WDGQEGGWKAANCGKLV+HAIGKM+EWI LYGGNLSGTIGSL YP AEY EATAEDEIEDGVEEQT EWLGEDAEDA EG
Sbjct: 306 KKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWLGEDAEDAIEG 519
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE) HSP 1 Score: 396 bits (1018), Expect = 1.440e-133 Identity = 185/214 (86.45%), Postives = 202/214 (94.39%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
KKYNVELLRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANRKNGVSKEE+ASVTR +FK+++P+KLEEKAE+YMREKGWGLIWTPPYMPTFQPIELFWQHGK YVSIHFEKGRNMLDVWKQ+RLGWYGDP+WDGQEGGWKAA+CGKLV+H IGKM+EWI LYGGNLSGTIGSL YP AEY EATAEDEIEDGVEEQT EWLGEDAE+A EG
Sbjct: 268 KKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAADCGKLVQHTIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWLGEDAENAIEG 481
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 5.400e-131 Identity = 183/214 (85.51%), Postives = 201/214 (93.93%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
KKYNVELLRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANRKNGVSKEE+ASVTR +FK+++P+KLEEKAE+YMREKGWGLIWTPPYMPTFQPIELFWQ GK YVSIHFE+GRN+LDVWKQ+RLGWYGD +WDGQEGGWKAA+CGKLV+HAIGKM+EWI LYGGNLSGTIGSL YP AEY EATAEDEIEDGVEEQT EWLGEDAEDA EG
Sbjct: 301 KKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQQGKHYVSIHFERGRNILDVWKQIRLGWYGDSEWDGQEGGWKAASCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWLGEDAEDAIEG 514
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 384 bits (987), Expect = 8.980e-127 Identity = 184/216 (85.19%), Postives = 201/216 (93.06%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQY--VSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
KKYNVELLRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANR NGVSKEE+ASVTR +FK+++P+KLEEKAE+YMREKGWGLIWTPPYMPTFQPIELFWQHGK Y VSIHFEKGRN+LDVWK++RLGWYGDP+WDGQE GWKAANCGKLV+HAIGKM+EWI LYGGNLSGTIGSL YP AEY EATAEDEIEDGVEEQT EWLGEDAEDA EG
Sbjct: 427 KKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANR-NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWLGEDAEDAIEG 641
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5KGN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN0_9PHAE) HSP 1 Score: 357 bits (915), Expect = 1.490e-121 Identity = 167/197 (84.77%), Postives = 184/197 (93.40%), Query Frame = 1
Query: 52 VSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
V+RESEG+A + NFEVPA+GSLPNANRKNGVSKEE+ASVTR +FK+++P+KLE+KAE+YMREKGWGLIWTPPYMPTFQPIELFWQHGK Y+SIHFEKGRNMLDVWKQ+RLG YGDP+WD QEG WKAANCGKLV+HAIGKM+EWI LYGGNLSGTIGSL YP AEY EATAEDEIEDGVEEQT EWLGEDAEDA EG
Sbjct: 39 VTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEKKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYLSIHFEKGRNMLDVWKQIRLGCYGDPEWDSQEGWWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWLGEDAEDAIEG 235
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5K6H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H9_9PHAE) HSP 1 Score: 351 bits (900), Expect = 4.490e-119 Identity = 168/207 (81.16%), Postives = 182/207 (87.92%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEK-LEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGE 618
KKYNVE LRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANRKNGVSKEE+ASVTR +FK ++P+K LE+KAE+YMREKGWGLIWTPPYM FQ IELFWQH K YVSIHFEKG NMLDVW+Q+RLGWYGDP+W GQEGGWKAANC KLVEHAIGKMNEWI LYGGNLSGTIGSL YP AEY EA AEDE ED VEEQ EWL E
Sbjct: 26 KKYNVEFLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKTNFPQKKLEDKAETYMREKGWGLIWTPPYMTNFQSIELFWQHVKHYVSIHFEKGGNMLDVWRQIRLGWYGDPEWGGQEGGWKAANCEKLVEHAIGKMNEWIGLYGGNLSGTIGSLEYPVAEYQEAMAEDETEDRVEEQKDEWLSE 232
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5L7T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T4_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.610e-110 Identity = 163/214 (76.17%), Postives = 177/214 (82.71%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
KKYNVELLRKYGC KV+RESEG+A + NFEVPA+GSLP ANRKNGVSKEE+ + AE+YMREKG GLIWTPPYMPTFQPIELFWQHGK YVSIHFEKGR MLDVW+++RLGWYG+P+WDGQEGGWK ANCGKLVEHAIGK NEWI LYGG+LSGTIGSL YP AEY E AEDEIEDGVEEQT +WLGEDAEDA EG
Sbjct: 234 KKYNVELLRKYGCTLSKVTRESEGKAAEYNFEVPAQGSLPKANRKNGVSKEEI-----------------DFAETYMREKGLGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRTMLDVWRRIRLGWYGNPEWDGQEGGWKTANCGKLVEHAIGKKNEWIGLYGGSLSGTIGSLEYPMAEYREGMAEDEIEDGVEEQTDKWLGEDAEDAMEG 430
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5JG34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG34_9PHAE) HSP 1 Score: 332 bits (852), Expect = 2.680e-106 Identity = 157/190 (82.63%), Postives = 172/190 (90.53%), Query Frame = 1
Query: 76 AVQRNFEVPAE-GSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
A+ RN P GSLPNANRKNGVSKEE+ASVTR +FK+++P+KLEEKAE+YMRE+GW LIWTPPYMPTFQPIELFWQHGK YVSIHFE+GRNMLDVWKQ+RLGWYGDP+WDGQE GWKAANCGKLVEHAIGKMN+WI LYGG+LSGTIGSL YP AEY EA AEDEIEDGVEEQT EWLGEDAEDA +G
Sbjct: 471 ALTRNSRCPKPTGSLPNANRKNGVSKEEIASVTRTYFKKNFPKKLEEKAETYMREQGWRLIWTPPYMPTFQPIELFWQHGKHYVSIHFERGRNMLDVWKQIRLGWYGDPEWDGQERGWKAANCGKLVEHAIGKMNKWIGLYGGSLSGTIGSLEYPVAEYQEAMAEDEIEDGVEEQTDEWLGEDAEDAIKG 660
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5JM91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM91_9PHAE) HSP 1 Score: 313 bits (801), Expect = 1.700e-102 Identity = 155/214 (72.43%), Postives = 164/214 (76.64%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMNEWISLYGGNLSGTIGSLVYPAAEYLEATAEDEIEDGVEEQTYEWLGEDAEDATEG 642
KK+NVELLRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANRKNG G GLIWTPP MPTFQPIELFWQHGK YVSIHFEK RNMLDVWKQ+RLGWYGDP+W+GQEGGWKAANCGKLVEHAIGKMNEWI LYGGNLSGTIGSL YP AEY EA EDEIE GVEE+T EWLGED EDA EG
Sbjct: 174 KKFNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNG---------------------------------GRGLIWTPPCMPTFQPIELFWQHGKHYVSIHFEKRRNMLDVWKQIRLGWYGDPEWNGQEGGWKAANCGKLVEHAIGKMNEWIGLYGGNLSGTIGSLEYPVAEYQEAMTEDEIEHGVEEKTDEWLGEDVEDAIEG 354
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 308 bits (789), Expect = 1.200e-98 Identity = 139/159 (87.42%), Postives = 154/159 (96.86%), Query Frame = 1
Query: 1 KKYNVELLRKYGCKSFKVSRESEGEAVQRNFEVPAEGSLPNANRKNGVSKEEVASVTRRFFKESYPEKLEEKAESYMREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRLGWYGDPKWDGQEGGWKAANCGKLVEHAIGKMN 477
KKYNVELLRKYGC SFKV+RESEG+A + NFEVPA+GSLPNANRKNGVSKEE+ASVTR +FK+++P+KLEEKAE+YMREKGWGLIWTPPYMPTFQPIELFWQHGK YVSIHFEKGRNMLDVWKQ+RLGWYGDP+WDGQEGGWKAANCGKLV+HAIGKM+
Sbjct: 350 KKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16467.1 >prot_C-linearis_contig9.16467.1 ID=prot_C-linearis_contig9.16467.1|Name=mRNA_C-linearis_contig9.16467.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=139bp MREKGWGLIWTPPYMPTFQPIELFWQHGKQYVSIHFEKGRNMLDVWKQVRback to top mRNA from alignment at C-linearis_contig9:259686..260601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16467.1 ID=mRNA_C-linearis_contig9.16467.1|Name=mRNA_C-linearis_contig9.16467.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=916bp|location=Sequence derived from alignment at C-linearis_contig9:259686..260601+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:259686..260601+ >mRNA_C-linearis_contig9.16467.1 ID=mRNA_C-linearis_contig9.16467.1|Name=mRNA_C-linearis_contig9.16467.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at C-linearis_contig9:259686..260601+ (Chordaria linearis ClinC8C monoicous)back to top |