mRNA_C-linearis_contig89.16437.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig89.16437.1
Unique NamemRNA_C-linearis_contig89.16437.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig89.16437.1 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 4.070e-144
Identity = 292/492 (59.35%), Postives = 360/492 (73.17%), Query Frame = 1 
Query:  151 MVFTRKVAGFALLSLGLAARQAAAVENCLDLITAIGAASGTATATITLEADFTCEGNLEIGTSQNVEITSAETGPHILSIGSQFSGSTSTEASGGASLIINQGTLTLNGVNFATEXXXXXXXXXXXXXXXVVNCEFSLFHEGGFVDQGGAIFSDSSQSLDITSCTFKSNVALLNXXXXXXXXXXXXXXXXXXXSKNEVGTGELGNGAGGDVWAAPNVDLNIIDSSFSSSSAEYGGASIKCCGAEILRSNFTSTDTSGSTERHFGAVMVGGPGEDACDKELTVTGSTFSGCSVAAGLGEGGSLAIFDTTAKLIDCVFESSTGGAVLFTSTSADGQHKLDMTSCQFNENTNPSDAYAGVDAPQGTAVVTTNTGVSDGDT-VEMGTFFNMFCFANVPYECEFVYDGAEVVHEGEFKCHICDIEGTRQATGLDDDLVGATDRGVDS-SSDDKQGVVIGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL 1620
            M FTRK A  AL  LGLAARQA+AV  CL LITA+ A SGT T  + LE  FTCE  + +  SQ+V I+    G + +++G+ F+GST+T+A  G SL  N+GTL L+G+ FATE    XXXXXXXXXXX       L+  G F+ +GG I+SDS+ ++ I+  TFKSN+A   XXXXXXXXXXXXXXXXXXX  NEVGTG   +GAGGDV+A  NVDL +  ++FS+S+AEYGGA+I+CCGA I  + FT  DT         A++V  P +D C +EL ++ STFSGC+V +  G GGS+AIFDT+A + DC FESS G AVLF+S+S  G+H+L M   QFN NT P++AYA  D  QG A+V TNTGV+DG+T V MG F +M+CFAN PYECEFVYD +++VH GEFKC ICDIEG RQ +G DDDL+ A++R +D  SS D QG+VIGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL
Sbjct:    1 MGFTRKSAVLALFFLGLAARQASAVTTCLALITAVEAISGTGT--VELEGGFTCEAYITVAASQDVTIS----GAYTITLGAPFAGSTNTDA--GGSLFENEGTLKLDGITFATETTDGXXXXXXXXXXXXXXXXXELYPTGIFLSRGGVIYSDSAGTISISDSTFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXXALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYA-TDTEQGAAIVVTNTGVADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSDNQGIVIGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL 483
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BLAST of mRNA_C-linearis_contig89.16437.1 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 2.780e-107
Identity = 244/465 (52.47%), Postives = 320/465 (68.82%), Query Frame = 1 
Query:  151 MVFTRKVAGFALLSLGLAARQAAAVENCLDLITAIGAASGTATATITLEADFTCEGNLEIGTSQNVEITSAETGPHILSIGSQFSGSTSTEASGGASLIINQGTLTLNGVNFATEXXXXXXXXXXXXXXXVVNCEFSLFHEGGFVDQGGAIFSDSSQSLDITSCTFKSNVALLNXXXXXXXXXXXXXXXXXXXSKNEVGTGELGNGAGGDVWAAPNVDLNIIDSSFSSSSAEYGGASIKCCGAEILRSNFTSTDTSGSTERHFGAVMVGGPGEDACDKELTVTGSTFSGCSVAAGLGEGGSLAIFDTTAKLIDCVFESSTGGAVLFTSTSADGQHKLDMTSCQFNENTNPSDAYAGVDAPQGTAVVTTNTGVSDGDT-VEMGTFFNMFCFANVPYECEFVYDGAEVVHEGEFKCHICDIEGTRQATGLDDDLVGATDRGVDSSS-DDKQGVVIGLSLALGLTLVV 1539
            M  +RK AG AL  LGLAARQA+AV  C  LITA+ A SGT TA   LE  FTC+ ++ +  SQ+V I+    G + +++G  F+GST T+A  G SL +N+GTL L+G+ FAT XXXXXXXXXXXXXXX       L+  G F+ +GG ++SDS+ ++ I+  TF SN+A   XXXXXXXXXXXXXXXXXXX  NEVGTG   +GAGGDV+   NV+L +  ++FS+S AEYGGA+I+CCGA I    F              A++V  P +D C ++L ++ STFSGC+V +  G GGS+AIFDT+A + DC FESS G AVLF+S+S  G+H+L M   QFN NT P++AY   D  QG A+V TNTGV+DG+T V MG F +++CFAN PYECEFVYD +++VH GEFKC ICDI+G +Q +G D DL G+ D+   S+S D K  ++IGLS AL L +++
Sbjct:    1 MELSRKSAGLALFFLGLAARQASAVTTCPALITAVEAISGTGTAE--LEGSFTCDTHITVAASQDVTIS----GAYTITLGPLFAGSTDTDA--GGSLFMNEGTLKLDGITFATXXXXXXXXXXXXXXXXXXXXXXELYPTGAFLSRGGVVYSDSAGTISISDSTFTSNLASEXXXXXXXXXXXXXXXXXXXXRGNEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXXALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYV-TDTEQGAAIVVTNTGVADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTDGDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCIIL 456
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BLAST of mRNA_C-linearis_contig89.16437.1 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 5.060e-79
Identity = 171/396 (43.18%), Postives = 234/396 (59.09%), Query Frame = 1 
Query:  271 TATATITLEADFTCEGNLEIGTSQNVEITSAETGPHILSIGSQFSGSTSTEASGGASLIINQGTLTLNGVNFATEXXXXXXXXXXXXXXXVVNCEFSLFHEGG--FVDQGGAIFSDSSQSLDITSCTFKSNVALLNXXXXXXXXXXXXXXXXXXXSKNEVGTGELGNGAGGDVWAAPNVDLNIIDSSFSSSSAEYGGASIKCCGAEILRSNFTSTDTSGSTERHFGAVMVGGPGEDACDKELTVTGSTFSGCSVAAGLGEGGSLAIFDTTAKLIDCVFESSTGGAVLFTSTSADGQHKLDMTSCQFNENTNPSDAYAGVDAPQGTAVVTTNTGVSDGDT-VEMGTFFNMFCFANVPYECEFVYDGAEVVHEGEFKCHICDIEGTRQ-ATGLDDDLV 1446
            T T T+ LE+ FTC+ ++ +  SQ+V I+    G + +++G+ F+GST+T+A  G SL +N+GTL L+G+ FATE           XXXX       LF  GG  F+ +GG I+SDS   + I++ TFKSN+A                      + NEVGTG    GAGGDV+A  NV+L +  ++FS+S+AEY                                ++V  P +DAC +EL ++ + FSGCSV +  G GGS+AIFDT+A + DC FESS G AVLF+S+S  G+H+L M   QFN NT P++AYA  D  QG A+V TNTGV +G+T V MG F +M+CF N PYECEFVYD +++VH GEF C +C I+G RQ  +G DDD V
Sbjct:    2 TVTGTVELESGFTCDAHITVDASQDVTIS----GAYTITLGALFAGSTATDA--GGSLFVNEGTLELDGITFATEATDGNRAVWNGXXXXXXXXXXELFPSGGGEFLARGGVIYSDSDGEIAISASTFKSNIASERGGAVYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYA-TDTEQGAAIVVTNTGVEEGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSV 390
[Close]
BLAST of mRNA_C-linearis_contig89.16437.1 vs. uniprot
Match: D7FVA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA3_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 3.690e-7
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = -1 
Query: 4147 QRSARNAHRKLQDARFTKAYEAALMEWFQQRVLG 4248
            +RSARNAHRKLQDARFT+AYE ALMEWFQQRVLG
Sbjct:  406 ERSARNAHRKLQDARFTRAYETALMEWFQQRVLG 439
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVA4_ECTSI4.070e-14459.35Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7FV99_ECTSI2.780e-10752.47Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FVA0_ECTSI5.060e-7943.18Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FVA3_ECTSI3.690e-791.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:639210..646957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons7
Model size4527
Cds size1473
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930698.2593815-UTR-C-linearis_contig89:639209..6393501622930698.2593815-UTR-C-linearis_contig89:639209..639350Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 639210..639350 +
1690881203.1740332-UTR-C-linearis_contig89:639209..6393501690881203.1740332-UTR-C-linearis_contig89:639209..639350Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 639210..639350 +
1622930698.298141-UTR-C-linearis_contig89:639508..6395171622930698.298141-UTR-C-linearis_contig89:639508..639517Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 639509..639517 +
1690881203.1831665-UTR-C-linearis_contig89:639508..6395171690881203.1831665-UTR-C-linearis_contig89:639508..639517Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 639509..639517 +
1622930698.4139266-UTR-C-linearis_contig89:644053..6469571622930698.4139266-UTR-C-linearis_contig89:644053..646957Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 644054..646957 +
1690881203.2612517-UTR-C-linearis_contig89:644053..6469571690881203.2612517-UTR-C-linearis_contig89:644053..646957Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 644054..646957 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930698.3145604-CDS-C-linearis_contig89:639517..6399671622930698.3145604-CDS-C-linearis_contig89:639517..639967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 639518..639967 +
1690881203.1929815-CDS-C-linearis_contig89:639517..6399671690881203.1929815-CDS-C-linearis_contig89:639517..639967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 639518..639967 +
1622930698.3329535-CDS-C-linearis_contig89:641897..6422271622930698.3329535-CDS-C-linearis_contig89:641897..642227Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 641898..642227 +
1690881203.2017832-CDS-C-linearis_contig89:641897..6422271690881203.2017832-CDS-C-linearis_contig89:641897..642227Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 641898..642227 +
1622930698.3508043-CDS-C-linearis_contig89:642497..6427311622930698.3508043-CDS-C-linearis_contig89:642497..642731Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 642498..642731 +
1690881203.2114837-CDS-C-linearis_contig89:642497..6427311690881203.2114837-CDS-C-linearis_contig89:642497..642731Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 642498..642731 +
1622930698.3621836-CDS-C-linearis_contig89:642887..6429951622930698.3621836-CDS-C-linearis_contig89:642887..642995Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 642888..642995 +
1690881203.222908-CDS-C-linearis_contig89:642887..6429951690881203.222908-CDS-C-linearis_contig89:642887..642995Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 642888..642995 +
1622930698.3768833-CDS-C-linearis_contig89:643282..6434581622930698.3768833-CDS-C-linearis_contig89:643282..643458Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 643283..643458 +
1690881203.2339513-CDS-C-linearis_contig89:643282..6434581690881203.2339513-CDS-C-linearis_contig89:643282..643458Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 643283..643458 +
1622930698.396725-CDS-C-linearis_contig89:643878..6440531622930698.396725-CDS-C-linearis_contig89:643878..644053Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 643879..644053 +
1690881203.2444701-CDS-C-linearis_contig89:643878..6440531690881203.2444701-CDS-C-linearis_contig89:643878..644053Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 643879..644053 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16437.1prot_C-linearis_contig89.16437.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig89 639518..644053 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig89.16437.1

>prot_C-linearis_contig89.16437.1 ID=prot_C-linearis_contig89.16437.1|Name=mRNA_C-linearis_contig89.16437.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=491bp
MVFTRKVAGFALLSLGLAARQAAAVENCLDLITAIGAASGTATATITLEA
DFTCEGNLEIGTSQNVEITSAETGPHILSIGSQFSGSTSTEASGGASLII
NQGTLTLNGVNFATESKDGYRAIYNTGTLSVVNCEFSLFHEGGFVDQGGA
IFSDSSQSLDITSCTFKSNVALLNGGAVHVSGSETVTITSSSFSKNEVGT
GELGNGAGGDVWAAPNVDLNIIDSSFSSSSAEYGGASIKCCGAEILRSNF
TSTDTSGSTERHFGAVMVGGPGEDACDKELTVTGSTFSGCSVAAGLGEGG
SLAIFDTTAKLIDCVFESSTGGAVLFTSTSADGQHKLDMTSCQFNENTNP
SDAYAGVDAPQGTAVVTTNTGVSDGDTVEMGTFFNMFCFANVPYECEFVY
DGAEVVHEGEFKCHICDIEGTRQATGLDDDLVGATDRGVDSSSDDKQGVV
IGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL*
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mRNA from alignment at C-linearis_contig89:639210..646957+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig89.16437.1 ID=mRNA_C-linearis_contig89.16437.1|Name=mRNA_C-linearis_contig89.16437.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7748bp|location=Sequence derived from alignment at C-linearis_contig89:639210..646957+ (Chordaria linearis ClinC8C monoicous)
CGAACCTTAACCTTTTCCTTTTCCCTTTTCCCGAAACCACACATCACCTC
CCTAAGCTCCAAGCCCTCAACCCTCCTCCACGGCCATCAGCGGACGCGAA
GCCGGCACACCAGACGGTCCTGCCTGATCAACTTCACGCTGGTGAGACAG
CCGCTAGAGTCTGCTCTAGTGACTGATGCGGAAGCTCTTAGCTTTGAGAA
CATTAACATTTGATGTTTTCGAGCCAACGTCTGTTGTGTGGAACAACACA
CCCAGCTCATTTTTTTTTCTCTCCCTTTCCCGTTCCCTTACCCTCCCAGC
TGCTAAGGATGGTGTTCACTCGAAAGGTTGCGGGCTTCGCCCTGTTGTCG
CTCGGGCTCGCCGCGAGGCAAGCCGCGGCGGTAGAGAACTGCCTCGACCT
CATCACCGCCATTGGCGCTGCATCGGGAACCGCCACCGCAACCATCACCC
TGGAGGCCGACTTCACCTGCGAAGGCAACCTCGAGATCGGAACCAGCCAA
AACGTGGAGATCACGTCGGCTGAGACCGGGCCCCACATCCTCTCCATCGG
GTCACAGTTCTCTGGCTCCACATCCACGGAAGCGTCAGGAGGGGCAAGCC
TCATCATTAACCAGGGCACCCTTACGCTCAACGGTGTAAACTTCGCGACC
GAGTCGAAGGACGGGTACCGCGCCATTTACAACACGGGAACGCTGTCGGT
GGTGAACTGCGAATTCAGCCTCTTCCACGAAGGAGGCTTCGTCGACCAGG
GTGGAGCGGTGAGCGGCATGTCTGGTTTCCTTGGGTGCACTACCTTTTGT
TTTTATCCAAAAATGAGAGACTTTTTTTTTAGGTACTGTAGAGAGCTGGT
GTAAGTTGGGTGCCACACACGTCATTTTACATTTTACGGGCTAATTTTTA
ATATTTTGTGCGTGTGCGTGTGATGTTAACGAGTACATCCTGACTGCTAG
CTCTTCGGTTGTGCTATTTGTTGTCTGGATTCCATCCGTCTTTCAACGTC
TTTGCATGTTTATGTGGCGCTAGGATGTCTTTGGATACAGATAAGAGAGT
TGGTACTCAACAGAGTAGTGGGGATGGACGTGGACGGAACAATCTCAAAA
AAAAATGCCGCGAAATGTAAAAAAAAAGCTGAAAATGGAATCGCTTGCTC
CGCTCTTGTGGCTCTTTTTCTCGAATCTGTGTGCCGGCGTCAAATTTGTC
TCGGCGAACACGTCTACAGCAGCCGCTTTAAATCGCTTGCTCCGCTCTTC
TGGCTCTTCTTCTCGAATATGTGTGCCGGCGTCAATTTGTCTCGGCGAAC
ACCTCTGCAGCAATACCGCTTTTTTGCTGTTCCCTACAATAGGGTGCGAA
GGATCGCGGAAACGTTGTTGTCTCTTGAATCCCGAACACGACGCAACATG
CGCCTTGTCACTCTTTGATCCGGCCTTGTTGCGGCTGCTGTCCTGTGTAA
TAGCGTGGTGGTACAACAACCCTTTGCCCCATTTGGGAAAACGGACCACA
CTGCTGTCGGCGCGGTACAAGCTACCTGGTACACTTCCAGCATATTTACA
TTCGCACAAATAGGTCAGGCCCCTCAACTGCTCTCTCTGTTCCAGCATCC
CGGGAAGTGCTTTCCGCTCTCGAAAAAGTCGAATCCATTAGACTAGGGAT
CCGGCTATGTTTTGCCTTGCCGGGGGAACTGGGACGGAACACCCCGGCTT
CGTAGGGGTAGCAAGATAGAATCGGGAGGTCATACCCCTGGTTGGTGATG
TTGGCGCTCCACTCTTATTTTATTTTTGCGTTTGCATCACATAGCGTGTA
GAGGGGAGCGGAGGGCTCCAGACTACAATTTGTTTCCTGATTCTCTTATT
TTTCTCGTATTTTATCGCTCTGCTGACCCCAGCTGACCCTTGGGGTCCGT
TTATTTTTTCAGTATACCTTTTTAGGTAAGTTAGCTTGTGACCACGGAAA
TTGGCCGCGTCAAGTGATGGATTAGTACGGAGAGGTTGAGACAGAAGGAG
GTGGTACTGGATAGAGACGAGACCGGGATGGTTTTTAATGTGAAGACGAC
AACATTAGACTAGAGGAGTTGCGTGGTGTACGCCCGCTGTCGATCGTCCG
CTGGTGGGCGGCGTGCTTCACTGTCTCCTCCCTCAACGTGGCGATCGCTG
CATAGTTCGGTTGCACAGGGCGAATGACGCAGCATGGGCGAAAGGCAAAA
CATTTATGTAGTAACGAGGAAGATGCTGAGACAGCCCGAAATTGAGTGGA
ACGACGTGATCGTCATTCGCCCTGTGCAACCGAACTATGCAGCGATTGCC
GCGTTGAGGGAGGAGACAGTGAAGCACGCCGCCCACCAGCGGACGATCGA
CAGCGGGCGTACACTAGTTGACTGCTGTACATATCCTGCCAGTCCCCAGA
GCGAACAGCAGTATACAGCGGTTGTATCATGTGTTTCACGTGTGTTCAGC
AATTACGTTACCTGTTCATGACCAGAGGACTGTACTGATGTCCATTACAA
GTTCAAAGCTCTTACCGCAGGCAGCACTGCTGTTTTTTTTCAAATGTTGA
CACAATGGTTTCCTTTGGCGACGCTTTTCCGTCCCGGATACTGATTTTAA
CACCCGCTTCTGGTGATCTCTGCTGTGTCTGCCCCTTTCATGTGTTTGCC
TCTTGCCTCTGAACGTGCCCGCCATGTGGCTCTGGCAGATCTTCTCCGAC
TCGTCCCAGTCACTCGACATCACTAGTTGCACCTTCAAGTCGAACGTCGC
GCTGTTGAACGGCGGTGCCGTCCATGTGAGCGGCTCCGAAACCGTCACCA
TCACCAGCAGCAGCTTTAGCAAAAACGAGGTTGGCACTGGCGAGCTTGGT
AACGGTGCAGGGGGCGACGTGTGGGCTGCCCCCAATGTTGACCTCAACAT
TATTGACAGCTCTTTCTCTAGCTCTTCGGCTGAGTACGGCGGCGCTTCCA
TCAAGTGCTGCGGCGCCGAGATATTGAGGTCCAACTTCACGAGCACGGAC
ACCAGTGGCTCGACTGAGGTGAGTCTTGTCAACCTGTCGGAGTGTACGTG
TACAGGAAAAACTACCACAAGTTCAGAGAAGAATCCACCGTCGTGCTGCA
TTTTGTATAGTGGCGGGAGCACCACGACTTTGTGGGCTGTGGACCTGTTC
GTTCTGCGTTGTCATCAACGCCACGGAACGGTCTTGAAGTCATAAAACTG
CTGTTGGTCTTTTGGTTGGATGCATGTATTCGGCCGCCTTTGTACGTACT
CGACGCCGTTCTGACTTGCGCCCCCACCACCTCACCAGCGGCACTTCGGA
GCTGTAATGGTTGGCGGCCCCGGTGAGGATGCTTGCGACAAGGAACTGAC
TGTGACGGGATCCACCTTCAGCGGTTGCAGCGTGGCCGCTGGCCTGGGAG
AGGGCGGTTCTCTGGCGATTTTCGACACCACGGCGAAGTTGATTGACTGC
GTCTTTGAGTCCAGCACTGGCGGGGCGGTGCTGTTCACCTCCACCAGCGC
GGACGGACAACACAAGCTCGACGTGAGTGACGGGCTCGTCTCTAGACCAT
CTGGTCTTACTGGTGTCAGCCCCACACACTTGTCGAAGAAATTTGATGCG
GATTTGAATTGGTCAACTACTTGTACGGTAACCGTCGCGCTTGCTTCCCT
TGCTGCCTTCCGCTGTCTTGCGTTTCAGATGACGAGCTGCCAGTTCAACG
AGAACACCAATCCCTCGGACGCGTACGCCGGCGTCGACGCCCCCCAGGGT
ACCGCGGTGGTGACGACCAACACTGGTGTCAGCGATGTGAGACTCGTGTT
GACGAGTACCGTATCGACCTGCCACATTATCTGTTGTCGCCGCATCAGAG
TTAGATGGTCGTCGTCACTACGGCGGTAGTATACGCGCAAGCTTCACTTG
ATTCAGCAACGCCCCTGTGTACAGGAAAGCAAAGACTCCCAGGCCACATC
CTTGTTGCCAGCCATGTCGTGAAACTCCGACCTCCGTTCGCGGGTATTTA
CGTGCGACACCGATGGCGTGGCACTCACAGTCGGTGCTTTGTCGTGTTTT
CCTGCTCGCTTTTTTTCTCTCAGGGGGACACGGTCGAGATGGGCACCTTC
TTCAACATGTTCTGCTTCGCCAACGTACCGTACGAGTGCGAGTTTGTGTA
CGACGGTGCGGAAGTCGTGCACGAGGGGGAGTTCAAGTGCCACATCTGCG
ACATCGAAGGAACGCGACAGGCCACCGGCCTTGACGACGACCTCGTCGGG
TAAGCACAAGCACAAGCCGTTCTCGTGGTGAAGCAGTACTGGCACGGTAG
CTCGGGCACGTTCCTACTGGCTGCAGCACCGCCATGGGTTGCGGGCATAT
GTAGCAAGATGATTCCTACCGGTCCAATATCGGCGGGCCTTGTGCTCTTC
CCTTGTCGCACGAGGCGTGTTTGTCTTGAGGCTTCGCACCCCCTGAGACC
CCTTAAACTAGAGTACCTATCCCAAGCCCAAGTGTAGAGAGCTGTTCCGC
GTAGCTCGCCCAGCTCCGATGTGTCATGCATTGCAAAGCTGGCACGCTCA
CGTCGGGTGATCACAAGCTTCTCGTACCCGTGTTGTTTCCGGTATTTTTT
TGTCGCGTTCCAAATACGTCCTCTTTTAGTCGACCTCGCTCGCTATTTCT
GCCTGCTCGTGGTCTCCAGGGCAACCGACCGCGGCGTCGACTCGTCATCC
GACGACAAGCAGGGCGTCGTGATCGGCCTGTCGCTCGCGTTGGGGTTGAC
GCTCGTTGTGATCGGGGCATTGGCTGTGTGGAAGTTCAGGGTGCGCAAGA
ACGCACGCCGTCTGATGGAGGACATGGGCGAAGGCGACTTGTAGGTTGCT
TCGTTCCTCGTGGAAACTGGAATCGCAAGTCTCAGCAAGGGGGGGAGGCA
TCCTGTCACGGATAAAAATGGCGTTTGGGAACAGAGCCGTAACGCCGAGG
AGAGCTTGTTACGCCGAGGAAGAGCTTGTTACGCCGAGGAGAGCTTGTTG
CCCCGAGGAGAGCTTGTTACGTACCGCAGCAAGTGGTCTGGCTCTTCACT
CAAACCTTGTTCTTAGGTTTTTGAGTGTCGATGCCTTTAAAGGTTTTTTG
CTCATTTGTTTGGGAGGGGTTCTGTGTCATTTTTGTTAGGGTGGTGTTTT
CGCAATCACGGCAGCGATCATCTAGGTGTTGGTGAAGTAGTTCATCATGC
GCCGTCGAGTGCGTTAGGGCTGAGGTTGGGTCAAGGCAAGGGTAAGTTTT
CTCCCCTTATATGGCGGGAAGAATTATTTGTTTGCCGGTGCTGCTCGTGC
GAGCTTTGCTGCCTCGTCTGTATTGCTGCCACCCGTAGGTTGATCGATGT
CAGTGCTCCACGAGCCCTTGGCGGCAAGTACTGCTGTGATGATGAACCGC
TCGGGTGGGGTATGTGAGGGATAAGGGCTGCAGAGTACGGTCAAATGTTG
TGTATCTTATTGTTATTTCGCGTTGCCGTAGCGAAGGAGTTGGAAAGGTG
CAGTGTGCCGGGTGCGGTATCGACTTAGCGGCGCCGTGTAGTATAGGGCT
GTGTTTTCTTTTTGCTCCTCAGAAGACCTTGGTTTTCACAAATGTTATGG
GGCGCGGGTGGGAGGGACGGCGGGGTGTTTACAAAGAGCCTAGTCGCTTC
ATGTGAGACAAATGTTTCTTGTAATTTTTTCCCCCTGTTGGCATGTGTTG
GCGGAGTGGACACGTTCGGATCGCCCGGAGGTTGTTGGTTGTTGCTGTAT
GTCATCTCGTGGCTCGATCGACGGTGATATGCCGCCGCAGGTCGCTTCTT
TCTCGGTTATTTTGCGCAGCGAGAAGTTAAAAGTTTGCAGTTGTTTTGTT
TTCACCATTGCCTCTTCAAGCGTCGAGTGCCATCGATCGCCAGACACACC
CTTCTGTCTGGGAAAGCGGCAAAAAGCAGGCGTTGGAAGGAGGAACACCC
GGCGCAGAGCGAGGGTCAGAGTAGTCGTGGTCTTTCCATGTGCATGTGCC
TTGCAGACCAAGGTTCGCTCTATTTGTCTACCCTTTGTACTGTGGGTATT
TTCTTCCAAGGCCAACAGCACCTTCGCGGTGTGCCATTTTTGGTGTAGTG
TCCCCGCCCTCTTGCGGCAGCAGGTACCGAAATTGCCGGTTCTCTGTGTC
TGCTTCACAGCGCGTTGCGAGTAAAACGTTTGTCGCTGGTGGGGGCGAAG
GGTTTCGAGGGACTCGGGGAGGTGTAGGTGAAGACCTAGTCTAGGAAAGA
GAGGATTTATGACGTGAGGATGGGCTTCCGACCACGGCTCGTGCTTCAGG
TGATGTTGGGACTTTTTGTCATGGCGAGTGATGTCGGTCATCTCTTGTCG
TTGTATCGAAAATGTATGATGAGTGCAATCATGATCATATATATCAGTAC
GAAAGTAGTCTCGAGCCTTTTGTCTTGTGTGAGGTTGACAGTTAAGCTAA
GCAGAGAGCGAACCGAAAAATAACTGCTGGTTTCAAAGGCTTTCAGCCTT
GCGTGCGAACGAAATGCGGCTGACTTCCTCGCGTGAGAGAGAAAGGGATT
TGTGGCACGCAGTTAGCTGATTAGTAAAAAAAACTGCGGCGGAATTTCAA
AACAGGCACGACCGAATATCCTTGGACGGCGGGTGGCGTCACCCACGGTC
GCCTAGGCGGGCAGACTGATTGATGATGGCGCGCCGTCTGAATGGAAAAG
GAAGCATTTCTTTGCCGACCTCTGGGTAGTTTTATTGTTGGGAGTATTCA
TACAGCAGTATCCCTCGTAAAAGGACGGCAAGCAGATCATCACTGAAGCA
AACGTTGCTCGAATAGGTAGTTGAGTGTTGACACTCGACGAAGACGTTAC
ACGGCTGTCCCAATTGCACTGGCCTCCCGCCTGAACAGCTTCCTACCACT
ACTGTCTTTTGCATCCCTTAGTCCACAACTACCGATACCGACACAGCGCC
GGCAACATCACAGCCACGCCGTTCAAACTTGAGCAGAGTCTGGCCGCATT
TGATCACGTCCGTTGCTCGTTCGTCCTGCCTCAAACCTGGAACCAAACCA
CTGACACTGCTACAGGCGACAGGCAGTCAGACAGTTGCGAGAAACGACGC
TGACACGAGGCAGGGTCGTGCCCAAGTCCAATCAATCTAACTCATAGACA
AACACAAGATTGCAACCCAAGCCCTTCTTCGAGTAGTCCGGAACGACCTT
GTGAAATTACGGTAGGCCTCAAGCCACAACTAACTATAAGTAGGTCCCTG
CTCACCCAACGAACTCCACAGCAGGGTGCACATATCTTTCTATCCTACCC
CGCCGAGAGGAAGATTAAGATTTCTCTGCATGCTGCCAGCGATCAGCCCC
AATCCTCATGAGCGGATACCGAGCACGCGTTGTTGAAACCACTCCATCAG
AGCGGCTTCGTACGCCTTGGTGAATCTGGCATCTTGCAGCTTTCGGTGCG
CGTTTCGGGCGCTTCGCTGTTGGTGCCGTTTGGTGCCGTTTGGTGTTGTG
TGCCATACATAGGCCGTTCGGTTGATTCAGCCGGTTTCGGCCAGCCCCCC
GACACAACGCCGTCGATCCAGTTTTCGCGCGTGTTATGCGCGCATCAGAC
ATGAGACATCAGACATGAGATGGGCCGTAAAACAAGGCCGCATGCATGCA
CAGAGGGGGGCCCGGTGAGGGCCGCAATCCCAAGTTTGGAGCAGCGGGAG
ACGAGGCAGAGGCGACAACAAGATTCAAGATGCGGAGGGGAGGGGTGG
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Coding sequence (CDS) from alignment at C-linearis_contig89:639210..646957+

>mRNA_C-linearis_contig89.16437.1 ID=mRNA_C-linearis_contig89.16437.1|Name=mRNA_C-linearis_contig89.16437.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2946bp|location=Sequence derived from alignment at C-linearis_contig89:639210..646957+ (Chordaria linearis ClinC8C monoicous)
ATGGTGTTCACTCGAAAGGTTGCGGGCTTCGCCCTGTTGTCGCTCGGGCT
CGCCGCGAGGCAAGCCGCGGCGGTAGAGAACTGCCTCGACCTCATCACCG
CCATTGGCGCTGCATCGGGAACCGCCACCGCAACCATCACCCTGGAGGCC
GACTTCACCTGCGAAGGCAACCTCGAGATCGGAACCAGCCAAAACGTGGA
GATCACGTCGGCTGAGACCGGGCCCCACATCCTCTCCATCGGGTCACAGT
TCTCTGGCTCCACATCCACGGAAGCGTCAGGAGGGGCAAGCCTCATCATT
AACCAGGGCACCCTTACGCTCAACGGTGTAAACTTCGCGACCGAGTCGAA
GGACGGGTACCGCGCCATTTACAACACGGGAACGCTGTCGGTGGTGAACT
GCGAATTCAGCCTCTTCCACGAAGGAGGCTTCGTCGACCAGGGTGGAGCG
ATGGTGTTCACTCGAAAGGTTGCGGGCTTCGCCCTGTTGTCGCTCGGGCT
CGCCGCGAGGCAAGCCGCGGCGGTAGAGAACTGCCTCGACCTCATCACCG
CCATTGGCGCTGCATCGGGAACCGCCACCGCAACCATCACCCTGGAGGCC
GACTTCACCTGCGAAGGCAACCTCGAGATCGGAACCAGCCAAAACGTGGA
GATCACGTCGGCTGAGACCGGGCCCCACATCCTCTCCATCGGGTCACAGT
TCTCTGGCTCCACATCCACGGAAGCGTCAGGAGGGGCAAGCCTCATCATT
AACCAGGGCACCCTTACGCTCAACGGTGTAAACTTCGCGACCGAGTCGAA
GGACGGGTACCGCGCCATTTACAACACGGGAACGCTGTCGGTGGTGAACT
GCGAATTCAGCCTCTTCCACGAAGGAGGCTTCGTCGACCAGGGTGGAGCG
ATCTTCTCCGACTCGTCCCAGTCACTCGACATCACTAGTTGCACCTTCAA
GTCGAACGTCGCGCTGTTGAACGGCGGTGCCGTCCATGTGAGCGGCTCCG
AAACCGTCACCATCACCAGCAGCAGCTTTAGCAAAAACGAGGTTGGCACT
GGCGAGCTTGGTAACGGTGCAGGGGGCGACGTGTGGGCTGCCCCCAATGT
TGACCTCAACATTATTGACAGCTCTTTCTCTAGCTCTTCGGCTGAGTACG
GCGGCGCTTCCATCAAGTGCTGCGGCGCCGAGATATTGAGGTCCAACTTC
ACGAGCACGGACACCAGTGGCTCGACTGAGATCTTCTCCGACTCGTCCCA
GTCACTCGACATCACTAGTTGCACCTTCAAGTCGAACGTCGCGCTGTTGA
ACGGCGGTGCCGTCCATGTGAGCGGCTCCGAAACCGTCACCATCACCAGC
AGCAGCTTTAGCAAAAACGAGGTTGGCACTGGCGAGCTTGGTAACGGTGC
AGGGGGCGACGTGTGGGCTGCCCCCAATGTTGACCTCAACATTATTGACA
GCTCTTTCTCTAGCTCTTCGGCTGAGTACGGCGGCGCTTCCATCAAGTGC
TGCGGCGCCGAGATATTGAGGTCCAACTTCACGAGCACGGACACCAGTGG
CTCGACTGAGCGGCACTTCGGAGCTGTAATGGTTGGCGGCCCCGGTGAGG
ATGCTTGCGACAAGGAACTGACTGTGACGGGATCCACCTTCAGCGGTTGC
AGCGTGGCCGCTGGCCTGGGAGAGGGCGGTTCTCTGGCGATTTTCGACAC
CACGGCGAAGTTGATTGACTGCGTCTTTGAGTCCAGCACTGGCGGGGCGG
TGCTGTTCACCTCCACCAGCGCGGACGGACAACACAAGCTCGACCGGCAC
TTCGGAGCTGTAATGGTTGGCGGCCCCGGTGAGGATGCTTGCGACAAGGA
ACTGACTGTGACGGGATCCACCTTCAGCGGTTGCAGCGTGGCCGCTGGCC
TGGGAGAGGGCGGTTCTCTGGCGATTTTCGACACCACGGCGAAGTTGATT
GACTGCGTCTTTGAGTCCAGCACTGGCGGGGCGGTGCTGTTCACCTCCAC
CAGCGCGGACGGACAACACAAGCTCGACATGACGAGCTGCCAGTTCAACG
AGAACACCAATCCCTCGGACGCGTACGCCGGCGTCGACGCCCCCCAGGGT
ACCGCGGTGGTGACGACCAACACTGGTGTCAGCGATATGACGAGCTGCCA
GTTCAACGAGAACACCAATCCCTCGGACGCGTACGCCGGCGTCGACGCCC
CCCAGGGTACCGCGGTGGTGACGACCAACACTGGTGTCAGCGATGGGGAC
ACGGTCGAGATGGGCACCTTCTTCAACATGTTCTGCTTCGCCAACGTACC
GTACGAGTGCGAGTTTGTGTACGACGGTGCGGAAGTCGTGCACGAGGGGG
AGTTCAAGTGCCACATCTGCGACATCGAAGGAACGCGACAGGCCACCGGC
CTTGACGACGACCTCGTCGGGGGGACACGGTCGAGATGGGCACCTTCTTC
AACATGTTCTGCTTCGCCAACGTACCGTACGAGTGCGAGTTTGTGTACGA
CGGTGCGGAAGTCGTGCACGAGGGGGAGTTCAAGTGCCACATCTGCGACA
TCGAAGGAACGCGACAGGCCACCGGCCTTGACGACGACCTCGTCGGGGCA
ACCGACCGCGGCGTCGACTCGTCATCCGACGACAAGCAGGGCGTCGTGAT
CGGCCTGTCGCTCGCGTTGGGGTTGACGCTCGTTGTGATCGGGGCATTGG
CTGTGTGGAAGTTCAGGGTGCGCAAGAACGCACGCCGTCTGATGGAGGAC
ATGGGCGAAGGCGACTTGTAGGGCAACCGACCGCGGCGTCGACTCGTCAT
CCGACGACAAGCAGGGCGTCGTGATCGGCCTGTCGCTCGCGTTGGGGTTG
ACGCTCGTTGTGATCGGGGCATTGGCTGTGTGGAAGTTCAGGGTGCGCAA
GAACGCACGCCGTCTGATGGAGGACATGGGCGAAGGCGACTTGTAG
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