mRNA_C-linearis_contig89.16414.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: D8LH81_ECTSI (RNA binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH81_ECTSI) HSP 1 Score: 1091 bits (2822), Expect = 0.000e+0 Identity = 672/888 (75.68%), Postives = 718/888 (80.86%), Query Frame = 2
Query: 44 EMQDPSTRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIR---EDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEE--SGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTS--SQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGR-VKRQKVGGSAGGDDFADMD 2683
EM+ P TRLIVKNVPKHVDEKRL +HFAERG+VSDAKIVRTK+GKSRQFAFVGFTT +DAE+AL YYNQTFLDTSRIQ+ERAQPKG GIARPWSKHSEGSSRAQKLA+AKARKE +KA XXXX RGKVEKEEFMAALKKRSEARFWDNDDALL ++ RE XXXXXXXXX E+G GS+ SSK+ R+ GG SDMDWLRSKV KGGXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A GG XXX SGLSVGRLFVRNLPYTCTEDDLR+LFGSFGMLSEVHLPVDDVK+GKGFAFVQFVIPEDAGKAL+QLDRHAFHGRLLHI+PARRQPGSSGAE +G RRARA D+VGWNASFVRSDTVVDALADRLGVGKSDILDREE DMAVRLALGET LVKENKEYFEKEGV++SVLES K G GKGAEERSSTVILVKNLPYS EAAELAKRFGAFGDVGRVLLPPSK VALVEFLAASDA+KAFKRLA RFQHV LYLEWAP+KAF++TFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRAS EPLT++VKNLSF+T E GLR+CFEKAGL VRSVSIPRKKGPGASEA LSMGFGFVECAD SLV+K+LKTLQGTVLDGHALELKRSTKRLTP TKASS SQGD +K++K+IIRNIPFQATAKE+REL SSFGQLKRVRLPKKFDGGHRGFAFVDFLT+QEA+ AK SLES+H YGRHLV +WAEDGEDMD +R KAARD+RGP++GGR KRQK S GDDFADMD
Sbjct: 9 EMEAPKTRLIVKNVPKHVDEKRLWQHFAERGEVSDAKIVRTKDGKSRQFAFVGFTTESDAEEALKYYNQTFLDTSRIQVERAQPKGNAGIARPWSKHSEGSSRAQKLAEAKARKE-------VKAXXXXXXXXXXXXXXXXXXXX--RGKVEKEEFMAALKKRSEARFWDNDDALLDQAQAAAGGNIEDREGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEGTLGSTSSSKEKRQAGGGSDMDWLRSKVGKGGXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNAQTADGGHXXXXXXXXXXXXXSGLSVGRLFVRNLPYTCTEDDLRDLFGSFGMLSEVHLPVDDVKKGKGFAFVQFVIPEDAGKALEQLDRHAFHGRLLHIIPARRQPGSSGAEASGTAGSAATAGKSYKEKKEMDRRARAGDTVGWNASFVRSDTVVDALADRLGVGKSDILDREEGDMAVRLALGETLLVKENKEYFEKEGVDLSVLESTKGKGSGKGAEERSSTVILVKNLPYSAEAAELAKRFGAFGDVGRVLLPPSKTVALVEFLAASDAKKAFKRLACARFQHVLLYLEWAPLKAFKDTFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASKEPLTMFVKNLSFSTTEAGLRTCFEKAGLQVRSVSIPRKKGPGASEATLSMGFGFVECADASLVDKSLKTLQGTVLDGHALELKRSTKRLTPATKASSXXXXXSQGDSLKRTKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGGHRGFAFVDFLTAQEAMGAKKSLESTHFYGRHLVGEWAEDGEDMDTLRAKAARDLRGPSNGGRPAKRQKAASS--GDDFADMD 874
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A662XGG3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGG3_9STRA) HSP 1 Score: 547 bits (1410), Expect = 3.220e-177 Identity = 360/869 (41.43%), Postives = 488/869 (56.16%), Query Frame = 2
Query: 62 TRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEG-KSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSR-GKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAE----ERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAF-RETFEPSSKPASLPASEKAATGEEAKVDED-EVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQKV 2644
TRL V+N+P +VD RLR HFA +G+V+DA ++RTK+G KSR+F FVGF +A AE A +++Q+F DT +I + A + + IARPWSK+S GS R Q+ A + + A + +KAA GS E +EFM ++ RS+ +FW NDD G E QE+ + E EDG G+ S + K +SDMD+LRSK+ K +++ + E E GG D E RLFVRNLP+T E+DL ELF ++G + EVH+P+D+ KR KGF FV F DA +AL L+ AF GR LH++ AR +P E A R+ +A GWNASF+R D V +LA+R+GV + +I+D+E+ +MAVRLA+GET LVKENK++F +EGV+++ +E A + ERS+TVIL+KNLP++TE ELA+ F +G++GR LLPPSK +A+VEFL S+ARKAF+ LAY ++QHVPLYLEWAPVK F R S+ AS K A V++D + A G AS T+ VKNL+FAT E L FE+ G +R V++ R+K P LSMGFGFVE E+AL+TLQ TV+DGHAL+L S K+LT K + + +KSK+I+RN+ F+AT+ E+RELF +FGQLKRVR+PKKFDG HRGFAFV+FLT QEA +A ++L SSHLYGRHLV +WAED +D++ +R KA RD+ + R KR K+
Sbjct: 21 TRLYVQNLPAYVDTARLRDHFAAQGEVTDACVIRTKDGAKSRRFGFVGFKSAKQAEQARGFFHQSFFDTCKINVRLALARESEEIARPWSKYSVGSGRYQEQHPA---------DSGVVATSSSEKTSPDNKAATAKKGGSKEEASGEFKEFMETMQARSKTKFWANDDVQGPADAKASAKGMGGAEEADSDDEY-------QELGA-----LESHEDGEGGAKKQS--SAKAEELSDMDFLRSKMSKN----------IDNDSDDEDAMEGIE--------------EDKDYANERGGRKAGGGKQAESSKATGSGGAVPTNDDSEP------TARLFVRNLPFTAVEEDLEELFSTYGPVEEVHMPLDETKRRKGFGFVLFRTTVDAQRALTALNGMAFQGRRLHVIFARSKPEKLDPEAA-----LADPNLTHKQRKELERQLQAQKQTGWNASFIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAQEGVDLNAIEGALVKKPSQETRAKKIERSTTVILIKNLPHTTEEDELAQLFRKYGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRAATATSTAGASGQKGIKTAAAVVPGVEDDGDAAVGDASH---TLCVKNLNFATKEPALEKLFERCG-RLRKVTVARRKDP--KRGMLSMGFGFVEFVAAKDTERALQTLQSTVVDGHALKLILSQKKLTEAPKRKAGDGNAEASGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGKHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIETLRAKATRDLSAIQESDRRKRMKL 825
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A5D6YES3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YES3_9STRA) HSP 1 Score: 549 bits (1415), Expect = 1.380e-174 Identity = 385/864 (44.56%), Postives = 493/864 (57.06%), Query Frame = 2
Query: 71 IVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGK-SRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSHSSKDTRKTG-----GVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAE--------ERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDV-KKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPAD 2617
+ KN+P +VD KRLR+HFA +G+V+DA +VRTK+G+ SR+F FVG+ T+ A+ A +++Q+F DT RI + A + + +ARPWSK+S GSSR Q DAK KL K K E ++FM ++ RS+ RFW NDD G E + + D E +E G S S D G +SD+D+LRSKV K T +DS SE+ E XXXXXXXXXXXXXXXXXXXXX +AG +S D E+ S RLFVRNLPY+ E+DL +LF ++G + EVH+P+DD KR KGF FV F DA AL L+ AF GRLLH+ A+ +P E R+ A+ GWNASF+R D V +LA R+GV + DILD+E +MAVRLA+GET LVKENK++F EGV++ +E A G ERS+TVILVKNLP++TE ELA+ F G++GR LLPPSK +ALVEF S+ARKAF+ LAY ++QHVPLYLEWAPVK F + S+ + AA G D+DE AA + T+ VKNLSFAT E L F + G VR V+I R+K P LSMGFGFVE D + A+ LQ TVLDGHAL LK S K+L P K + + G ++SK+I+RN+ F+AT+ E+RELF +FGQLKRVR+PKKFDG HRGFAFV+FLT QEA SA +L SSHLYGRHLV +WAED +D+D +R KA+RD+ AD
Sbjct: 288 VSKNLPAYVDSKRLREHFAAQGEVTDAAVVRTKDGRASRRFGFVGYKTSEQAQAACAFFHQSFFDTCRINVRFAIQRESEEMARPWSKYSAGSSRFQGTTDAK----------KLSTDAAEEQDPKRQKKTAKQQKPVDESSSEFQQFMETMQARSKTRFWANDDVQ-------------GPEAQAKAEAAALLHADDLD-----DDDGEYQEIKRKGGSESDDDGTGAGKSGATAMSDLDFLRSKVSK---------TVDDDSQSEASGSE---------KEYXXXXXXXXXXXXXXXXXXXXXERIKTQSGKHAGAADSVDAADEPEKPS----ARLFVRNLPYSAEEEDLTDLFSAYGPILEVHMPLDDTKRRKGFGFVLFKSTVDAQAALSALNGFAFQGRLLHVFFAKMKP-----EKVDPEQLLQNPNLTYKQKKELERQIAASKQTGWNASFIRGDATVGSLAQRMGVKRGDILDKENGNMAVRLAIGETMLVKENKDFFADEGVDLDAIEGALVKSGXXXXXXKPTAPKVERSTTVILVKNLPHTTEEEELAQMFRKHGEIGRFLLPPSKTLALVEFFEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFNKHAPRPSQADTKGVKAAAAPGVPDVADDDENAADARN----TICVKNLSFATKEPTLEKLFRQVG-GVRKVTIARRKDP--KRGLLSMGFGFVEFDDTKHADAAIAALQATVLDGHALNLKTSQKKLAPAAKRKADSDGAGVGAGRQSKIIVRNVAFEATSHEIRELFGAFGQLKRVRMPKKFDGKHRGFAFVEFLTEQEAQSAFAALASSHLYGRHLVLEWAEDADDIDTLRAKASRDLSAIAD 1089
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A485LS48_9STRA (Aste57867_25042 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS48_9STRA) HSP 1 Score: 538 bits (1387), Expect = 3.290e-174 Identity = 377/897 (42.03%), Postives = 522/897 (58.19%), Query Frame = 2
Query: 59 STRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAK---------------ARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIRE----------DGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRE--TFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQKVGGSAGGDD 2668
STRL V+N+P +VD+++LRKHF+ G+V+DA +V+TK+GKSR+F FVGF T A ++++TFLDT+RI ++ AQP+ + + RPWSK+S+GSSR ++ +AK + K+KE SAG +D EF+ ++ RS+ +FW NDD + ++ ++ A G+ESD E ++ D K +K +SD+D+L+SK + T E XXXXXXXXXXXXXXXXXXXXXXXXXXXX +A E ++ RLF+RNLPY+C E+DL+ELF +G +SE+H+P+DD KR KGF FV F DA KA LD F GRL+H++PA+ + G R+A A VGWNAS++R D VDALA RL V K +I+D+E +MAVRLA+GET L++EN+ +FE+EGV++ V+E A T K ERS+T +LVKNLP+ST+ LA+ F +G++ R +LPPSK +ALVEF+ AS+ARKAF+ LAY +FQ+VPLYLEWAPVK F++ T S K L A K AT A D + A + T+ VKNL+F T E L++ FE G +R V++ RKK P + LSMGFGFVE + + +KA++ +QG +++GHA+++K S K+L P +++T DV K+K+I RNI F+AT K++RELF +FGQLK VR+PKKFDG HRGFAFV+FLT EA SA +L SSHLYGRHLV +WAED +D++ +R KA+RD+ DG R +++ DD
Sbjct: 2 STRLFVQNLPVYVDDEKLRKHFSAHGEVTDACVVKTKDGKSRRFGFVGFKTETQTVSAQKFFDKTFLDTTRINVKVAQPRESVELDRPWSKYSKGSSRYKEKDEAKDVTADDXXXXXXXXXXXXQDKQKE---------TSAGGFD------------------EFVETMQPRSKTKFWANDDVMDASATSV----------------------ATAGGADGNESDDEYQDITTLHDVPADDDXXXEGDMDKSAKKP--MSDLDFLKSKT-------VRRIT---------------ESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVATKNGRRSASAKEDGSTKKPVVDDEAAPTSRLFIRNLPYSCVEEDLQELFAGYGAISELHMPLDDNKRTKGFGFVLFQSIADAEKARAALDGKPFQGRLMHVLPAKAKLEPEGV--------VDQTNLTYKQKKELERKALANTKVGWNASYIRGDATVDALASRLQVNKGEIMDKEAGNMAVRLAIGETILLQENQTFFEQEGVDLKVIEGAAKT---KSTAERSTTTLLVKNLPFSTDDVALAQLFRTYGELSRFVLPPSKTMALVEFMEASEARKAFRSLAYKKFQNVPLYLEWAPVKVFKKAATMTYSEK---LKAQGKTATAAAALPDAE---ADNVAELDNTLCVKNLNFTTTEKVLQAAFETFG-TLRKVTVARKKDPKTGKPTLSMGFGFVEFSTTAAAKKAMQQMQGNMIEGHAIDVKLSKKQLRPVKAKTNAT-----DVPKTKVICRNIAFEATVKDVRELFGAFGQLKMVRMPKKFDGKHRGFAFVEFLTEAEAKSAFAALSSSHLYGRHLVLEWAEDADDLETLRAKASRDLASIEDGQRAAKRRKNADDEEDD 802
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A024UIF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIF0_9STRA) HSP 1 Score: 538 bits (1387), Expect = 3.950e-174 Identity = 361/873 (41.35%), Postives = 504/873 (57.73%), Query Frame = 2
Query: 59 STRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKE-----EFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSE-SDAEIREDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEK------AATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQK 2641
STRL V+N+P +VD+++LRKHF G+V+DA +V+TKEGKSR+F FVGF T A A +++++F+DT+RI ++ AQP+ + + RPWSK+S+GSSR KEK + A D S K D A ++ K KE EF+ ++ RS+ +FW NDD + +V +G E SD + ++G S S+ T+K ++D+++L+SK + ED+G S DX XXXXXXXXXX + G+ E+ S RLF+RNLPY+C E+DL ELF +G + E+H+P+DD KR KGF FV F +A A LD F GRL+H++PA+ A++ R+A A VGWNAS++R D VDALA RL V K DILD+E +MAVRLA+GET L++EN+ +FE+EGV++ V+E A A K ERS+TV+LVKNLP+ST+ LA+ F G++ R +LPPSK +ALVEF+ S+ARKAF+ LAY +FQHVPLYLEWAPVK F+ PA++ SEK + +G A +V A + T+ VKNL+F+T E L++ FEK G +R V+I RKK + LSMGFGFVE + + + A++ LQG +L+GHA+++K S K+L P + T + K+K+I RNI F+AT K++RELF++FGQLK VR+PKKFDG HRGFAF++FLT EA SA +L SSHLYGRHLV +WAED +D++ +R KA+RD+ DG R +++
Sbjct: 2 STRLFVQNLPLYVDDEKLRKHFGAHGEVTDACVVKTKEGKSRRFGFVGFKTEAQTTAAQKFFDKSFIDTTRINVKVAQPRESEELDRPWSKYSKGSSRY--------------KEKDVVAVDEDTS--KVD----LNSAKVTKDKTPKETGGFDEFVETMQPRSKTKFWANDDVVDTEGGSATDRMKADLTGGDESDEEYQDLDKIHDVKAGDEDSDDDSGDEGMDKSKAST--TKKP--MTDLEFLKSKT-----VRRMIDSDEEDNGEVSSGESDXXXXXXXXXXXXXXDDNAVTKLDST----------------------KKVPKQGDTSEAVESSPRLFIRNLPYSCVEEDLTELFAGYGTIVELHMPLDDNKRTKGFGFVLFQTTAEAEAARAALDGKPFQGRLMHVLPAK-------AKLEPVVDTSDNSTLTYKQRKEAERKALANTKVGWNASYIRGDATVDALASRLQVNKGDILDKESGNMAVRLAIGETILLQENQAFFEQEGVDVKVMEGAAAK---KSNAERSNTVLLVKNLPFSTDETALAQLFRTHGELARFVLPPSKTMALVEFMEPSEARKAFRTLAYKKFQHVPLYLEWAPVKVFKA-------PATMTYSEKLKAAGNSTSGGGASAARPDVEADNVTELDNTLCVKNLNFSTTEAVLKAAFEKYG-TLRKVTIARKKDRHG-KLNLSMGFGFVEFSTSAAAKNAMQMLQGNLLEGHAMDIKLSRKQLQPVKAKPAKT-----ETPKTKVICRNIAFEATVKDVRELFAAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEATSAFAALSSSHLYGRHLVLEWAEDADDLETLRAKASRDLNSIQDGQRAAKRR 799
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: K3WZ46_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ46_GLOUD) HSP 1 Score: 539 bits (1389), Expect = 4.100e-174 Identity = 392/873 (44.90%), Postives = 518/873 (59.34%), Query Frame = 2
Query: 59 STRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGK-SRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLE-----SAKATGGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVK----KSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQKVG 2647
S+RL V+N+P +VD RLR HFA +G+V+DA ++RTK+ K SR+F FVG+ T A+ A +Y+Q+FLDT +I + A + + +ARPWSK+S GSSR Q AD K ++ + ++ + K K+ E ++FM ++ RS+ RFW NDD G E ++ E A+ ++D +SD+D+LRSKV K + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NA DG+E G RLFVRNLP+T E+DL +LF + G + EVH+P+DD KR KGF FV F DA AL L+ AF GRLLH++ A+ +P E R+ A GWNASF+R D V +LA R+GV + DI+D+E +MAVRLA+GET LVKENK++F +EGV+++ +E S++ T K ERS+TVILVKNLP++T+ ELA+ F G++GR L+PPSK +ALVEF ++ARKAF+ LAY ++QHVPLYLEWAPVK F + S+K + A +T V++DE AA + T+ VKNLSFAT E GL F++ G +R V+I R+K P LSMGFGFVE D VE A+K+LQ TVLDGHAL LK S K++T K + DD K KSK+I+RN+ F+AT+ E+RELF++FGQLKRVR+PKKFDG HRGFAFV+FLT QEA +A ++L SSHLYGRHLV +WAED +D+D +R KA++D+ D GR KR K G
Sbjct: 30 SSRLFVQNLPAYVDSARLRDHFATQGEVTDAVVIRTKDSKTSRRFGFVGYKTPEQAQKACAFYHQSFLDTCKINVRFAIQRESEEMARPWSKYSVGSSRFQSSADFKGKQPKDAESTDMEQGEEL----KQQKSKKKATGPMDENSEEFQQFMETMQARSKTRFWANDDVQ-------------GPEA-----------QAKAEAAALLKNDXXXXXXXXXXXXXXXXXXXXXXEMSDLDFLRSKVSKS-----------------------IDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGANA--------DDGDE---GKPTARLFVRNLPFTAVEEDLTDLFSAHGEILEVHMPLDDTKRRKGFGFVLFKNTVDAQAALSALNGFAFQGRLLHVIFAKMKP-----EKVDPEQLLQNPNLTYKQKKELERQITANKQTGWNASFIRGDATVGSLAQRMGVKRGDIMDKENGNMAVRLAIGETMLVKENKDFFAQEGVDLNAIEGAIVKSSQQTAAQKQKIERSTTVILVKNLPHTTDEDELAQLFRKHGEIGRFLVPPSKTLALVEFFEPTEARKAFRSLAYKKYQHVPLYLEWAPVKVFNKDAIKSTK---IDAKGIKSTAIVPDVNDDENAADANN----TICVKNLSFATKEQGLEKLFKQCG-KLRKVTIARRKDP--KRGMLSMGFGFVEFVDPKHVEAAIKSLQSTVLDGHALNLKISQKKMTQAPKRKAG---DDDDAKMSGRKSKIIVRNVAFEATSNEIRELFAAFGQLKRVRMPKKFDGKHRGFAFVEFLTEQEAQTAFSALSSSHLYGRHLVLEWAEDADDIDTLRAKASKDLSAINDSGRRKRMKRG 822
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A1V9YGD5_9STRA (RNA-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGD5_9STRA) HSP 1 Score: 538 bits (1385), Expect = 6.530e-174 Identity = 362/889 (40.72%), Postives = 502/889 (56.47%), Query Frame = 2
Query: 59 STRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKL-------ADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGG----ESEXXXDGEEEESGLSV------------------GRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQ 2638
STRL V+N+P +VD+ +LRKHFA G+V+DA +V+TK+GKSR+F FVG+ T A+ A ++++TF DT+RI ++ AQP+ +T + RPWSK+S+GSSR ++ A A +K KK+ D A +D EF+ ++ RS+ +FW NDDA+ + G + Q++ E S +K +SD+D+L+SK+ K + +D E XXXXXXXXXXXX + G G E+ D +E+E V RLFVRNL Y+ E+DL+ELF +G ++EVH+P+DD KR KGF FV F +A A LD F GRLLH++PA+ G E R+ A + VGWNASF+R D VDALA RL V K +ILD++ +MAVRLA+GET L++EN+++FE+EGV++ V+E A A A ERSSTV+LVKNL ++T+ LA+ F +G++ R +LPPSK +AL+EF+ AS+ARKAF+ LAY +FQ++PLYLEWAPVK F+ PA++ +EK A EV A + T+ VKNL+FAT E L++ FEK G +VR +I RKK P + LSMGFGFVE + +KA+ L GT+LDGHA+++K S K+L P K+++++S++ +K+I RNI F+AT K++RELF +FGQLK VR+PKKFDG HRGFAF++FLT EA SA SL SSHLYGRHLV +WAED ED+D +R KA RD+ DG R ++
Sbjct: 2 STRLFVQNLPIYVDDDKLRKHFAANGEVTDACVVKTKDGKSRRFGFVGYKTEDQADRAQKFFDKTFFDTTRINVKIAQPRESTELERPWSKYSKGSSRHTEVTAPVEPEAPAPVDDTKPKKGKKMTGEDSA-----FD------------------EFVETMQPRSQTKFWANDDAMAAGAGEGLAKIDEGSDDGSDGEY--------QDITKLHEDKDXXXXXXXEDDFDKSIAPKKP--MSDLDFLKSKMVK------------------TLTSDDEE--------------------------XXXXXXXXXXXXADTGAGRKDVETSDKVDSDEDEPSAKVVSEAASASKPVDDTVAPSARLFVRNLAYSTVEEDLQELFAGYGRITEVHMPLDDSKRTKGFGFVMFASEAEASAARAALDGKPFQGRLLHVLPAK---GKLEPEAL-----VDTANLTYKQKKEMERKQLANNKVGWNASFIRGDATVDALASRLNVQKGEILDKDAGNMAVRLAIGETMLLQENQQFFEQEGVDLGVIEGAAAKTKKGPAIERSSTVLLVKNLAFTTDETALAQLFRTYGELSRFVLPPSKTMALIEFVEASEARKAFRSLAYKKFQNMPLYLEWAPVKVFKG-------PATMSYTEKLKAQAAAAPARPEVEADNVAELDNTLCVKNLNFATTEKSLQALFEKVG-HVRKATIARKKDPKTQKPTLSMGFGFVEFGTAAAAKKAMAQLHGTLLDGHAIDIKLSKKQLAPVKKSAAASSAKPS----TKVICRNIAFEATIKDIRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFASLASSHLYGRHLVLEWAEDAEDLDTLRAKAGRDLASIEDGHRAAKK 793
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A067CYA7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYA7_SAPPC) HSP 1 Score: 536 bits (1382), Expect = 1.390e-173 Identity = 375/871 (43.05%), Postives = 510/871 (58.55%), Query Frame = 2
Query: 59 STRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKAR--------KESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAE-ERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKA-ATGEEAKVDEDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKS-KLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQ 2638
STRL V+N+P +VD+++LRKHFA G+V+DA +V+TK+GKSR+F FVG+ T A A ++++TF DT+RI ++ AQP+ + + RPWSK+S+GSSR ++ A K + ++KK K G SA +D EF+ ++ RS+ +FW NDD + G + + ++ +G++SD S + T+K +SD+D+L+SK+ K XXXXXXXXXXXXXXXXXXXXXXX XXX E RLFVRNLPY+ E+DL+ELF +G ++E+H+P+DD KR KGF FV F +A A LD AF GRLLHI+PA+ G E R+ AA VGWNASF+R D VDALA RL V K +ILD++ +MAVRLA+GET L++EN+ +FE+EGV++ V+E A A G KG ERS+TV+LVKNLP++T+ LA+ F +G++ R +LPPSK +AL+EF+ AS+ARKAF+ LAY +FQ +PLYLEWAPVK F+ PA++ +EK A + A +V A + T+ VKNL+F+T E L+S FEK G VR +I RKK P + LSMGFGFVE + + +KA+ L GT+LDGHA+++K S K+L P KA+ G K S K+I RNI F+AT K++RELF +FGQLK VR+PKKFDG HRGFAF++FLT EA SA SL SSHLYGRHLV +WA+D +DM+ +R KA+RD+ DG R ++
Sbjct: 2 STRLFVQNLPIYVDDEKLRKHFAANGEVTDACVVKTKDGKSRRFGFVGYKTEAQTVKAQAFFDKTFFDTTRITVKIAQPRESNELDRPWSKYSKGSSRHAEVTKAPEEPDDXXXXXKXTTTRKKKGKKTTGEDSA--FD------------------EFVETMQPRSQTKFWANDDVMAVGGGASLDKIAEGSDDGGSDDEYQDLSKIHDKMNAGNDSDXXXXXXXXFDKSIAP--TKKP--LSDLDFLKSKMVK------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSETSSDVAPSSRLFVRNLPYSAVEEDLQELFAGYGTITELHMPLDDSKRTKGFGFVMFASQAEATAARTALDGKAFQGRLLHILPAK---GKLEPEAL-----VDTANLTYKQKKEIERKQLAASKVGWNASFIRGDATVDALASRLNVKKGEILDKDAGNMAVRLAIGETMLLQENQAFFEQEGVDLRVIEGAAAAKGKKGPSVERSNTVLLVKNLPFTTDETALAQLFRTYGELSRFVLPPSKTMALIEFVEASEARKAFRSLAYKKFQTMPLYLEWAPVKVFKG-------PATMNYAEKIKAQAQAATPALPDVEADNVAELDNTLCVKNLNFSTTEKSLQSLFEKMG-TVRKATIARKKDPKTQKPTLSMGFGFVEYSTAAAAKKAMAGLHGTLLDGHAIDIKLSKKQLAPVKKAA------GPSKKPSTKVICRNIAFEATIKDIRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFASLASSHLYGRHLVLEWADDADDMETLRAKASRDLASIEDGQRAAKK 784
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: A0A6G0WZD7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZD7_9STRA) HSP 1 Score: 536 bits (1381), Expect = 1.400e-173 Identity = 379/865 (43.82%), Postives = 516/865 (59.65%), Query Frame = 2
Query: 59 STRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKLADAKARKESKEKEKKLKAADGAASAGKYDKAAXXXXAGSSRGKVEK--EEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSHSSKDTRKTGGVSDMDWLRSKVDKGGXXXXXKATPVEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLSVGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKATGGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKAATGEEAKVDE--DEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGPGASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQK 2641
STRL V+N+P +VD+++LRKHF+ G+V+DA +V+TK+GKSR+F FVGF T A + A +++++FLDT+RI ++ AQP+ + + RPWSK+S+GSSR KEK A + A K +K SS+ E +EF+ ++ RS+ +FW NDD L +S +S++E + E D K +K +SD+D+L+SK + DS XXXXXXXXXXXXXXXXXXXXXXXXXX N SE EEE S R+FVRNLPY+C E+DL+ELF +G +SEVH+P+DD KR KGF FV F DA KA + LD F GRLLH++ A+ +P R+A A VGWNAS++R D VDALA RL V K +ILD+E +MAVRLA+GET L++EN+ +FE+EGV++ V+E G K ERS+TV+LVKNLP++T+ LA+ F +G++ R +LPPSK +AL+EF+ AS+ARKAF+ LAY +FQ VPLYLEWAP+K F +K A+ +EK A EV A + T+ VKNL+F T E L + F K G+ +R V+I RKK P + LSMGFGFVE + + +KA+K LQGT+++GHA+++K S K+L P KA+ +T DV K+K+I RNI F+AT K++RELF +FGQLK VR+PKKFDG HRGFAF++FLT EA SA +L SSHLYGRHLV +WAED +D++++R KA+RD+ DG R +++
Sbjct: 2 STRLFVQNLPVYVDDEKLRKHFSAHGEVTDACVVKTKDGKSRRFGFVGFKTEAQTKSAQEFFDKSFLDTTRINVKVAQPRESEQLDRPWSKYSKGSSRY--------------KEKTAPATE-AHGDPKDNKGNDDAENDSSKPAKESGFQEFVETMQPRSKTKFWANDDVL--DSTAASAKVEANDSDDEYQDLDKIHDKSNEE-------NEEEEMD---------KSAKKP--MSDLDFLKSKT----------VRRISDS------------XXXXXXXXXXXXXXXXXXXXXXXXXXXSDIADYEHQPKNKTAASSEP-----EEERPSS--RVFVRNLPYSCVEEDLQELFAGYGAISEVHMPLDDNKRTKGFGFVTFESMADAEKAREALDGKPFQGRLLHVIRAKAKP----------EVVTDQSNLTYKQKKELERKALANSKVGWNASYIRGDATVDALASRLQVNKGEILDKEAGNMAVRLAIGETILLQENQAFFEQEGVDLKVIE-----GSNKTRTERSTTVLLVKNLPFTTDETGLAQLFRTYGELRRFVLPPSKTMALIEFMEASEARKAFRSLAYKKFQQVPLYLEWAPLKVF-------TKAATTTYAEKIKAQGAAPTSTVLPEVEADNVAELDHTLCVKNLNFTTTEKVLEAAFAKFGI-LRKVTIARKKDPKTGKPTLSMGFGFVEFSTAAAAQKAMKELQGTLIEGHAIDVKLSKKQLRPV-KAAKAT-----DVPKTKVICRNIAFEATVKDVRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFAALSSSHLYGRHLVLEWAEDADDLESLRVKASRDLASIQDGQRAAKRR 773
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Match: W7U807_9STRA (Rna binding motif protein 19 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U807_9STRA) HSP 1 Score: 542 bits (1397), Expect = 2.000e-173 Identity = 397/983 (40.39%), Postives = 531/983 (54.02%), Query Frame = 2
Query: 62 TRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFVGFTTAADAEDALNYYNQTFLDTSRIQIERAQPKGTTGIARPWSKHSEGSSRAQKL-----ADAKARKESKEKEKKLKAADGAASA----------------GKYDKAAXXXXAGSSRGK----VEKEEFMAALKKRSEARFWDNDDALLGNSEXXXXXXXXGREXXXXXXXXXXXXRSSQEVASGSESDAEIREDGATGSSH-----------------------------------SSKDTRKTGGVSDMDWLRSKVDKG--GXXXXXKATP-VEDSGSESXXXEDXEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGGESEXXXDGEEEESGLS-------------VGRLFVRNLPYTCTEDDLRELFGSFGMLSEVHLPVDDVKRGKGFAFVQFVIPEDAGKALDQLDRHAFHGRLLHIMPARRQPGSSGAEMAGXXXXXXXXXXXXXXXXXXXRRARAADSVGWNASFVRSDTVVDALADRLGVGKSDILDREESDMAVRLALGETHLVKENKEYFEKEGVNISVLESAKAT----------GGGKGAEERSSTVILVKNLPYSTEAAELAKRFGAFGDVGRVLLPPSKAVALVEFLAASDARKAFKRLAYTRFQHVPLYLEWAPVKAFRETFEPSSKPASLPASEKAAT---GEEAKVD-------------EDEVAAGRASSEPLTVYVKNLSFATVETGLRSCFEKAGLNVRSVSIPRKKGP--------------GASEAKLSMGFGFVECADKSLVEKALKTLQGTVLDGHALELKRSTKRLTPTTKASSSTSSQGDDVKKSKLIIRNIPFQATAKELRELFSSFGQLKRVRLPKKFDGGHRGFAFVDFLTSQEAVSAKNSLESSHLYGRHLVSQWAEDGEDMDAMREKAARDIRGPADGGRVKRQKVGGSAGG 2662
TRL VKNVPKHVDE+RL++HF + G V+DAK++RTK G+SR+ AF+GF T ++A AL ++N+TFLDTSR+ +E A P+G + + RPWS++S+GSS +K + + + + SK K + D +A G +K +++ K V K+EF+A + RS+ +FW NDD L SE RE + + G + D G S SS D G+SD+ +LRSKV KG G + P +E D G XXXX XXXXXXXXXXXXXX AG E G + S S GRLF+RNLP++ T +DL EL FG ++++HLP+DD R KGFAF F+IPEDA +A++ LDR AF GRLLH++ A+ P A+ RR RA D GWNAS++RS+TVV+A+A+RL + K +LDRE DMAV+LALGET L+ EN+E+F+KEGV+++VLESA A G RS T ILVKNLPYST EL + FG FG V +VLLPPS+++ LV+FL ++A++AFK LAY RF+HVPLYLEWAP+ TF P + E AT GE A D EDE R S T++VKNL+FAT E L + F+ VR+V+IP+K P A + LSMG+GFVE A + + AL+ ++GT LDGH L+ K STKRL S+ + K++KL++RN+ FQAT KE++ELF+ FG++K VRLPKKFDG HRGFAFV+FLT+QEA +A +L S+HLYG+ LV +WAED ED++ +REKA +D R A + GS GG
Sbjct: 13 TRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGL-TSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASSSCDV----GLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIXXXXEDEQEDKXXXXXXXXXXXXXXRDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADA------DPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPL----HTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGS--FTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRL------SARVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGA--ASALSNEAAGSGGG 970 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig89.16414.1 >prot_C-linearis_contig89.16414.1 ID=prot_C-linearis_contig89.16414.1|Name=mRNA_C-linearis_contig89.16414.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=881bp MQDPSTRLIVKNVPKHVDEKRLRKHFAERGQVSDAKIVRTKEGKSRQFAFback to top mRNA from alignment at C-linearis_contig89:355841..368084- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig89.16414.1 ID=mRNA_C-linearis_contig89.16414.1|Name=mRNA_C-linearis_contig89.16414.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12244bp|location=Sequence derived from alignment at C-linearis_contig89:355841..368084- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig89:355841..368084- >mRNA_C-linearis_contig89.16414.1 ID=mRNA_C-linearis_contig89.16414.1|Name=mRNA_C-linearis_contig89.16414.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5286bp|location=Sequence derived from alignment at C-linearis_contig89:355841..368084- (Chordaria linearis ClinC8C monoicous)back to top |