mRNA_C-linearis_contig87.16323.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: D7FH07_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH07_ECTSI) HSP 1 Score: 815 bits (2104), Expect = 5.460e-284 Identity = 585/833 (70.23%), Postives = 629/833 (75.51%), Query Frame = 2
Query: 230 MDTKAGGVLDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQET------------------VVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSS--EAARGAEGQTELSRLVLPLLLEQMAYDPAALKEACAALATDTAXXXXXXXXXXKNAGSSMDVXXXXXXXXXXXXXXXXXXXXXXMETTTNG---GSAKADEEPAAEAAKN------GGTVQGSGEKGEAGAAAEQPDIDAKLRWEWKLAVAEPLKLTAEVMANLCALAVGDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGTHATVLLDAMTDGGALERTVTTLRALLSPTPKDHQAQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAESGSRLPLPSGVAGDLAGLRATVALCAANLVQNLPAKALGESPLGLWSELCGMCEAAMERAPSCVETVSGVMWGLVRRAGPAVAAGVRTNAASAAATGATGP-------AADPLPLIKRLCDPETTRAFEARVNAVGILGALGSAAAEAATAG-------GWVDLGLGRALVQAMEDPHVLVQAEALNAVMDAYGDDGQDAAFRASGAPAALAVGVPAFKRKVKQEGKVLGRDAMCHLKETALNASRFVKYKQASGAPGGKGGR 2599
MD KAGGVLDGLTSLNA+TRESSCAAIASLFEKVDGPEAG +SWAAAQRLIA GLVKKLLPRMVDR PGVK+QA GAMRNISAVRDPRMCE+LV DDCLTPVLTLLDRMS TAA XXXXX VVVAQLVATLCNLLAAVDVAVGRFTRQGGL+VVMRLLL EGCRGSS++FGGALQ LHVATDSNED +RQL + PG ID ISALV+GAD+AHVKVS SMRVQAAGVLVNVAGLSS EAAR AE Q EL+R+VLPLLL+QMAYDP AL++AC LA + +A SSMDV XXXXXXXXXXXXXXXXX ETTT G G+ K + A+ ++ G ++G GEK E G +QPD DA+LRWEWKL VAEPLKLTAEVM NLCALA GDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G VLL+AM +GGAL+RT+ TL+ALL+PTP+D Q + XXXXXXXXXXXXXXXXXXXXXXXXXXXX + RL LP+GVAGDLA LRATVALCAANLVQNLPAKALGE+P LW+ELCGMCEAA ERAPSCVETV+GVMWGLVRRAGP VAAG R +ADPLPLI RLCDP TRAFEARVNAVG+LGALGSAAA AA AG G DLGLGRALVQAMEDPHVLVQAEALNAVMD YGDDG DAAFRASGAPAALA GVPAF+RKVKQEGK LGRDAMCHLKETALNA RFVKYKQAS GG+
Sbjct: 1 MDAKAGGVLDGLTSLNALTRESSCAAIASLFEKVDGPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMS---TAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVAQLVATLCNLLAAVDVAVGRFTRQGGLQVVMRLLLAEGCRGSSEVFGGALQALHVATDSNEDLSRQLAAQPGAIDHISALVQGADVAHVKVSASMRVQAAGVLVNVAGLSSGAEAARSAEDQAELTRVVLPLLLKQMAYDPTALQQACVTLALEKQPATPGPAAG--SAESSMDVDGEAGXXXXXXXXXXXXXXXXXXETTTTGXXXGATKGGGQEPAQGTESENDGAAGNDLEG-GEKKEEGGV-DQPDRDAQLRWEWKLTVAEPLKLTAEVMTNLCALASGDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASE--------GALTAVLLEAMAEGGALQRTLATLQALLAPTPRDRQREQPTAAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------NTDDRLALPAGVAGDLADLRATVALCAANLVQNLPAKALGENPHALWAELCGMCEAATERAPSCVETVTGVMWGLVRRAGPVVAAGFRAXXXXXXXXXXXXXXXXXPKRSADPLPLILRLCDPAVTRAFEARVNAVGMLGALGSAAAGAAVAGEGAAAAGGGTDLGLGRALVQAMEDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQASEGVSAAGGK 811
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A835YUS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS0_9STRA) HSP 1 Score: 198 bits (503), Expect = 8.100e-50 Identity = 272/811 (33.54%), Postives = 349/811 (43.03%), Query Frame = 2
Query: 248 GVLDGLTSLNAITRESSCAAIASLFEKVDGPE--------AGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLD---RMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGG--LEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVL--------------------PLLLEQM-AYDPAALKEACAALATDTAXXXXXXXXXXKNAGSSMDVXXXXXXXXXXXXXXXXXXXXXXMETTTNGGSAKADEEPAAEAAKNGGTVQGSGEKGEAGAAAEQPDIDAKLRWEWKLAVAEPLKLTAEVMANLCALAVGDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGTHATVLLDAMTDGGALERTVTTLRALLSPTPKDHQAQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAESGSRLPLPSGVAGDLAGLRATVALCAANLVQNLPAKALGESPLGLWSELCGMCEAAMERAP--SCVETVSGVMWGLVRRAGPAVAAGVRTNAASAAATGATGPAADPLPLIKRLCDPETTRAFEARVNAVGILGALGSAAAEAATAGGWVDLGLGRALVQAMEDPHVLVQAEALNAVMDAYGDDGQDAA-FRASGAPAALAVGVPAFKRKVKQEGKVLGRDAMCHLKETALNASRFVKYKQA 2569
G+LD L SL+ RESSC AIAS+F +D + A S +W AA++L+ GLVK+LL R+VD PGV++ A GA+RNISAV +P +CE +V D +T LT L+ R SP A E + QL+ L N+ VD AV FT GG + LL + S AL++ H AT+ N R L + P D ++AL+ PL++ + AYD E A + XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX E+ +A+L W+ A EP+ L AEV ANL ALA XXXX XXXXXXX ++ +L A+ + L R + L A P XX +LA LRA++A A+LV+ LPAK LG+ W +C + + A A C+E ++G+MWGLVRR P+ AG A AA+GA L++RL DP T A E RVNAV +L AL AAA A G DL ALV+++ED H LVQA ALNA MD +G D DAA F +G A+A +P FKRKVK EG GR+A+CHLKET+LNA+RFVKY ++
Sbjct: 33 GLLDNLKSLDPFVRESSCVAIASVFAHLDYQQTAGGSKRPANSANWGAARQLLQRGLVKRLLQRLVDPVPGVRVHAAGALRNISAVGEPALCEAMVGDGVVTTALTQLEGVLREGSPVAA-----------------------EHAQAIALQLLLLLSNIFEHVDAAVDSFTDGGGRGAACIAALLTAQAIASSPLHLAAALRLAHTATEGNAALCRALQAAPAAADALAALMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLVVRGLGAYDARLTHELAARADAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------EEAKTEAELVEAWRDAAVEPVLLAAEVAANLAALAXXXXXXXXXGDCEWASDDEDGMEAEAATGGXXXXXXXGESEG------SSAILQALAEAQVLPRVIDALGAAALAPPXXXXXXXXXX---------------------------------------------------AELAELRASLAATGASLVEALPAKGLGDIG-ATWRGVCALVDRAAADAALHDCLEPLTGMMWGLVRRV-PSEVAG-----AGDAASGA---------LLQRLVDPAQTGAAEVRVNAVAMLAALAGAAAAGA---GQADLAA--ALVRSLEDSHPLVQAAALNAAMDVWGSDSGDAAVFARAGLLGAIAAMLPDFKRKVKAEGSTHGREALCHLKETSLNAARFVKYMRS 705
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A1V9ZID8_9STRA (HEAT repeat-containing protein 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZID8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.740e-14 Identity = 80/280 (28.57%), Postives = 137/280 (48.93%), Query Frame = 2
Query: 254 LDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEV-VMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYDPAAL 1090
L GLTSL RE++C A+AS F D + + Q+++ GL+KKLLPRMVD + V++ + GA+RNIS +CE + + D +TP + L+ S+P A T DV+A + ++ Q+ + L NL + +A+ + T Q L + + LP S + A+++L V D+N ++ + + P + L++ + H S ++R+ A GV +N+ + A + L+LP+L +AYD A+
Sbjct: 44 LSGLTSLQGSVREATCVALASYFGGDD--QMSPEKAKLLQKMLNGGLLKKLLPRMVDHSKLVRLHSVGALRNISVAGGLDVCEYMTTQDVITPCVKLVGEYSTPEHLGA-QQTVDVHAFQ---------------ILEQVFSLLANLSESSALALHQITVQRSLVLPALMRCLPVNAAPSMQL--EAVKLLLVLGDNNPEWNASISAEPAHQQTLLQLIQSPE--H---SLNLRLTAVGVAINLPHVLDNA--------QAIALLLPVLKAAVAYDAVAV 290
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: W2Q4E3_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2Q4E3_PHYPN) HSP 1 Score: 89.0 bits (219), Expect = 1.780e-14 Identity = 88/325 (27.08%), Postives = 158/325 (48.62%), Query Frame = 2
Query: 122 MGKAKRQKS--HTQAARKAADASTAVAKEQQQDQQPLQMDTKAGG---VLDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRG-ADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYD 1078
MGKAK+ +S H + A STA +E Q + + T A + GL L RE++C AIA++F V+ EA + S QR++ +GL+KKL+PR+VD P V+ A GA+RN+S +CE++ + + +TP++ ++ + T AA + D+ A + ++ Q VA L NL + A+ T+ L + ++ R + + L++L + T+ N + + I AL++ AD ++S +R++A GV +N+ + + + ++R+ +P+L +AYD
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPSTAELEELQ----AMDLSTMAADEAQLFKGLVDLQGAVREATCVAIATMFGDVESDEAEATSRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCELMTTQNVVTPLVKVITENA---TDAALNGSGDLRAVQ---------------LLEQAVALLGNLCESCQAAINELTQGDLLPPIFKIAAQ--ARTHTALHLETLKLLLLITEGNAQLNEIIGANTAYQQTIGALIQAPAD----QLSLQVRLEAVGVAMNLQAIM-------QVEDNVARM-MPVLEAALAYD 289
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A662WHW5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHW5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.790e-14 Identity = 85/324 (26.23%), Postives = 154/324 (47.53%), Query Frame = 2
Query: 122 MGKAKRQKSHTQAARKAADASTAVAK-EQQQDQQPLQMDTKAGGVLDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYDPAAL 1090
MGKAK+ +S + R A+ E+ Q Q M + GL L RE++C A+A++F + EA S A QR++ +GL++KL+PR+VD P V++ A GA+RN+S +CE++ + + +TP++ ++ S T A A + D+ A + V+ Q VA L NL + A+ T+ L ++++ R + + +L++L + T+ N +L Q+ + A + + T ++ A G+ +NV + + + ++RLV P+L +AYDP ++
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPTPAELEEAQAQDFSSMPADEAQLFRGLLDLQGSIREATCVALATMFGDAESEEAEVRSRAKLQRMVDAGLLRKLVPRVVDPLPMVRLHALGALRNMSVTGGLELCEVMTTQNVITPLVKVI---SESATDATFAGSGDLQAVR---------------VLEQAVALLGNLCESCQAAINELTQGQLLPPILKIAAQ--ARVHTALHLESLKLLLLITEGNARL-NELFGANAAYQQVIGDIIQAPTDQLSLLT--KLHAVGIAMNVRAIM-------QVEANVARLV-PVLEAALAYDPVSV 293
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A2P4YLK3_9STRA (ARM repeat-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLK3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.170e-14 Identity = 87/321 (27.10%), Postives = 154/321 (47.98%), Query Frame = 2
Query: 122 MGKAKRQK--SHTQAARKAADASTAVAKEQQQDQQPLQMDTKAGGVLDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYD 1078
MGKAK+ + SH + A STA +E Q + M + GL L RE++C AIA++F + EA + S QR++ +GL+KKL+PR+VD P V+ A GA+RN+S +CE++ + + +TP++ ++ ++ T A + D+ A + ++ Q VA L NL + A+ T QG L + + +G R + + L++L + T+ N + + I AL++ L S +R++A G+ +N+ + + + ++R+V P+L +AYD
Sbjct: 1 MGKAKKLRTISHKKRAPPTGGPSTAELEELQAMDLSI-MAADEVQLFKGLVDLQGAVREATCVAIATMFGDAESDEAEARSRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCELMTTQNVVTPLVKVITENATDT---ALNGSGDLRAVQ---------------LLEQAVALLSNLCESCQAAINELT-QGELLPPIFKVAAQG-RVHTALHLETLKLLLLITEGNAQLNEVIAANSAYQQTIGALIQADQL-----SLQVRLEAVGIAMNLQTIM-------QVEDNVTRIV-PVLEAALAYD 287
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A7S2V006_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V006_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.490e-14 Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 2
Query: 2216 EARVNAVGILGALGSAAAEAATAGGWVDLGLGRALVQAMEDPHVLVQAEALNAVMDAYGDDGQDAAFRASGAPAALAVGVPAFKRKVKQEGKVLGRDAMCHLKETALNASRFVKYK 2563
EAR N + +LG LG A T GG ++ + L++A+ D V+VQAEALNAVMD Y DD + AF L + FK KVK EG + R+ HLKET LN +RF+ YK
Sbjct: 22 EARTNVLTMLGTLGQATP---TTGGPLEEAVAGLLLRAVGDAQVVVQAEALNAVMDVYCDDARHPAFLRHALLPRLRDCLRGFKAKVKSEGVQVDREVQLHLKETKLNIARFISYK 134
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A3F2REG6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2REG6_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.140e-14 Identity = 82/321 (25.55%), Postives = 156/321 (48.60%), Query Frame = 2
Query: 122 MGKAKRQKSHTQAARKAADASTAVAK-EQQQDQQPLQMDTKAGGVLDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQISALVRG-ADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYD 1078
MGKAK+ +S + R+ ++A+ E+ + + T + GL L RE++C A+AS+F V+ EA + S QR++ +GL+ KL+PR+VD P V++ A GA+RN+S +CE++ + + +TP++ ++ + T A + + DV + ++ Q +A L NL + A+ T+ L + ++ R + + L++L + T+ NE Q+ + I A+++ AD ++S +R+ A G+ +NV + + + + R+V P+L +AYD
Sbjct: 1 MGKAKKARSISHKKRQPPTGGPSIAEIEELKGLDLSSIATDEAQLFKGLVDLQGSIREATCVALASMFGDVESDEAEAKSRKKLQRMVDAGLLNKLIPRVVDPLPMVRLHALGALRNMSVTGGLELCELMTNQNVVTPLVKIITENA---TDEALSGSGDVRGVQ---------------LLEQALALLSNLCESCQAAINELTQGQLLPPIFKIA--GQARAHTVLHLETLKLLILITEGNERLNEQIGANKQYQQTIGAIIQAPAD----QLSLQIRLHAVGIAMNVQAI-------VQVEDNVVRMV-PVLEYALAYD 289
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: A0A6G0WHQ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHQ4_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 9.360e-14 Identity = 85/287 (29.62%), Postives = 138/287 (48.08%), Query Frame = 2
Query: 254 LDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVS-LPGGIDQISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYDPAALKEACAAL 1111
L GLT+L RE++C A+AS F DG +A D Q+L+ +GL+KKLLPR+VD + V++ A GA+RNISA + E ++++D LTP LL ++ T P + D++ + +V Q+ A L NL + +A+ + T Q + LL + + + +++L V +D+N D +R L P + QI L + ST +R+ GV +N+ + E L+LP+L +AYD + E A+
Sbjct: 50 LSGLTNLQGSVREATCVALASFFAG-DG-DASPDKLKMLQKLLNAGLLKKLLPRVVDPSKQVRLHALGALRNISAFGGLDVSEFMMTEDILTPCAKLLAEYATEATLVTPQN-KDLHTIQ---------------IVEQVFALLTNLCESSSMALVQITAQRQALLPCMLLCLRLKQPALQL--EVMKLLLVLSDNNPDLSRNLPQEFPPTLLQI--------LQAPENSTKLRLTTIGVAINLPNVLDN--------PESVALLLPVLKSAVAYDSIGVVEQAKAV 300
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Match: H3H3F4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3F4_PHYRM) HSP 1 Score: 81.6 bits (200), Expect = 5.220e-12 Identity = 85/322 (26.40%), Postives = 152/322 (47.20%), Query Frame = 2
Query: 122 MGKAKRQKS--HTQAARKAADASTAVAKEQQQDQQPLQMDTKAGGVLDGLTSLNAITRESSCAAIASLFEKVDGPEAGSDSWAAAQRLIASGLVKKLLPRMVDRAPGVKMQATGAMRNISAVRDPRMCEILVSDDCLTPVLTLLDRMSSPTTAAAPASTADVNAQKQXXXXXVTTPEQETVVVAQLVATLCNLLAAVDVAVGRFTRQGGLEVVMRLLLPEGCRGSSDIFGGALQVLHVATDSNEDFARQLVSLPGGIDQ-ISALVRGADLAHVKVSTSMRVQAAGVLVNVAGLSSEAARGAEGQTELSRLVLPLLLEQMAYD 1078
MGKAK+ +S H + A STA +E Q + M + GL L RE++C AIA++F + EA + S QR++ +GL+KKL+PR+VD P V+ A GA+RN+S +CE++ + + +TP++ ++ + T A D+ A + ++ Q VA L NL + A+ T+ L + ++ R S + L++L + T+ N +++ Q I AL++ +++ R++A GV +N+ + + + ++R+V P+L +AYD
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPSTAELEELQAMDFSV-MAADEAQLFKGLVDLQGAVREATCVAIATMFGDAESDEAEAASRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCEVMTAQNVVTPLVKVI---TDNATDKALNGGGDLRAVQ---------------LLEQAVALLGNLCESCQAAINELTQGELLPPIFKIAAQ--ARTHSSLHLETLKLLLMITEGNAQL-NEIIGANAAYQQTIGALIQAPG---DQLALQGRLEAVGVAMNLQAIM-------QVEDNVTRMV-PVLEAALAYD 289 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig87.16323.1 >prot_C-linearis_contig87.16323.1 ID=prot_C-linearis_contig87.16323.1|Name=mRNA_C-linearis_contig87.16323.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=827bp MGKAKRQKSHTQAARKAADASTAVAKEQQQDQQPLQMDTKAGGVLDGLTSback to top mRNA from alignment at C-linearis_contig87:766527..769414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig87.16323.1 ID=mRNA_C-linearis_contig87.16323.1|Name=mRNA_C-linearis_contig87.16323.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2888bp|location=Sequence derived from alignment at C-linearis_contig87:766527..769414+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig87:766527..769414+ >mRNA_C-linearis_contig87.16323.1 ID=mRNA_C-linearis_contig87.16323.1|Name=mRNA_C-linearis_contig87.16323.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4962bp|location=Sequence derived from alignment at C-linearis_contig87:766527..769414+ (Chordaria linearis ClinC8C monoicous)back to top |