mRNA_C-linearis_contig87.16317.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI) HSP 1 Score: 862 bits (2227), Expect = 1.380e-306 Identity = 430/451 (95.34%), Postives = 442/451 (98.00%), Query Frame = 1
Query: 217 LGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQQXXXXXXXXXXXSRYRR 1569
LGA LRNIQWDLESLHKFEKNFYIEHPDVSKR+++ET+AWR KCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYR+LS+HLQ+HGH GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDK+QEERD+VLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG+AVSFFGSKNSRN REL+KIL ES+N VPPELQQ XXXXXXXX SRYRR
Sbjct: 69 LGANLRNIQWDLESLHKFEKNFYIEHPDVSKRSEEETSAWRHKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXXHSRYRR 519
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA) HSP 1 Score: 705 bits (1820), Expect = 3.680e-245 Identity = 339/438 (77.40%), Postives = 383/438 (87.44%), Query Frame = 1
Query: 208 MSGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQQ 1521
M GLGAGLR+I WDL +L FEKNFYIEHP V+ R+D E +WR++ IVIQG+GIPKP MTFEEASMPEY+L EV+KQGF++PTPIQ QGWPMALLGRDMVGISATGSGKTLAFLLPAM+HINAQPYL+ GDGPIVLV+APTRELAVQIK+ECDKFG +S IKNTC+YGGVPKR Q+ DL RG+EI IATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQVTVGSLEL+ANKD+ QIIEC EDF KYR L HL+E G K L+FVETKKGCDALTRSLR DGY ARCIHGDK+Q+ERD+VL++F+ ++LVATDVAARGLDVK+I V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF SKN++ REL++IL ++ + VP EL Q
Sbjct: 50 MXGLGAGLRSINWDLSTLPVFEKNFYIEHPAVASRSDSEAQSWRRQHSIVIQGDGIPKPVMTFEEASMPEYLLSEVLKQGFNSPTPIQCQGWPMALLGRDMVGISATGSGKTLAFLLPAMVHINAQPYLQPGDGPIVLVIAPTRELAVQIKQECDKFGGTSGIKNTCLYGGVPKRTQLYDLKRGIEIAIATPGRLIDHLESGATNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQELAQ 487
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK) HSP 1 Score: 701 bits (1808), Expect = 2.310e-243 Identity = 339/440 (77.05%), Postives = 383/440 (87.05%), Query Frame = 1
Query: 202 DRMSGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQQ 1521
DRM+GLGAGL NI WD+ SL FEKNFY+EHPDV++R D E WRQ I+I+G+GIPKP +TFEEASMPEY+LREVMK F+APTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAM+HINAQPYL+ GDGPIVLVVAPTRELA+QIKEECDKFG SS IKNTCVYGGVPKR QV DL GVEIV+ATPGRLID LE G TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQVTVGSLEL AN DI+Q+IE ED+ KY L + G K LVFVETK+GCDALTRSLR DG+ ARCIHGDK+Q+ERD+VLK+F+ + ++LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFGSKN++ REL++I++E+ + VP LQQ
Sbjct: 43 DRMAGLGAGLHNIHWDMNSLPVFEKNFYMEHPDVTRRGDAEANRWRQGHQIIIEGQGIPKPCLTFEEASMPEYILREVMKYRFTAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMVHINAQPYLQPGDGPIVLVVAPTRELALQIKEECDKFGGSSGIKNTCVYGGVPKRAQVADLRAGVEIVVATPGRLIDHLEGGTTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSLQQ 481
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA) HSP 1 Score: 691 bits (1782), Expect = 3.270e-240 Identity = 339/436 (77.75%), Postives = 373/436 (85.55%), Query Frame = 1
Query: 208 MSGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPEL 1515
M LGA LR+IQWD+ L FEKNFYIEHPDV+ R+DQ A WR + GI I GEGIPKP TFEEASMPEYVL EV+KQGF PTPIQ QGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYL+ GDGPIVLVVAPTRELAVQIK ECDKFG SS IKNTCVYGGVPKR QV DL RGVEIVIATPGRLID LESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEVQALARDFL +YYQVTVGSL+L+ANKDI+Q +E ED++KY L ++L+EH G+VL+FVETKKG D L RSLR DG+ A IHGDK+Q+ERD+ LK+F+ G +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR RAGAKG +V+FF SKN+R R+L KIL ES N VPP L
Sbjct: 1 MGALGANLRSIQWDMSKLPVFEKNFYIEHPDVTARSDQVAAGWRAEKGITIMGEGIPKPVFTFEEASMPEYVLNEVIKQGFPCPTPIQCQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLQPGDGPIVLVVAPTRELAVQIKVECDKFGHSSGIKNTCVYGGVPKRTQVMDLQRGVEIVIATPGRLIDHLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPAL 436
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA) HSP 1 Score: 686 bits (1771), Expect = 5.240e-238 Identity = 341/439 (77.68%), Postives = 373/439 (84.97%), Query Frame = 1
Query: 202 DRMSGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQ 1518
DRM GLGAGLR+IQWDL L FEKNFYIEHPDVSKR + + A WR K I +QG GIPKP TFEEASMPEYVL+EVMKQGF PTPIQSQGWPMALLGRDM+GISATGSGKTLAFLLPAMIHINAQPYLE GDGPIVLV+APTRELA+QIK+ECDKFGRSS IKNTCVYGGVPKR QV DL RG+EIV+ATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL YQVTVGSL+LAANKDIKQ + ED +KY L R L+E+ GKVLVFVETK+GCD L RSL+ DG+ A IHGDKSQ++RD+ L+ FK G +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF K++R REL KIL+ES N VP L+
Sbjct: 38 DRMGGLGAGLRSIQWDLSKLPPFEKNFYIEHPDVSKRDEGDAARWRAKHVITVQGHGIPKPVFTFEEASMPEYVLQEVMKQGFDRPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALR 476
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A7S2W2X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2X9_9STRA) HSP 1 Score: 663 bits (1711), Expect = 5.860e-229 Identity = 333/453 (73.51%), Postives = 378/453 (83.44%), Query Frame = 1
Query: 211 SGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQQXXXXXXXXXXXSRYRR 1569
S +G+GLR I WDL L FEKNFY EHPDV+KRTD E AWR+ I IQG+GIPKP MTFEEASMP YVL EV+K GF++PTPIQSQGWPMALLGRDMVGIS TGSGKTLAFLLP MIHINAQPYL++GDGPIVLV+APTRELAVQIK ECDKFG SS+IKNTCVYGGVPKR QV DL GVEIVIATPGRLID LESG TNLRRVTYLV+DEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEV+ LARDFL +YYQVTVGSLEL ANK I+Q++E +D +KYR S L+ +V++FVETK+G D LTRSLR DGY A IHGDK+Q+ERD VL +F+ G +LVATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA G+++S+F K ++ REL++IL+E+ VPPEL+ XXXXXXXXSRY R
Sbjct: 34 SEMGSGLRRIDWDLSKLPVFEKNFYYEHPDVTKRTDDEANAWRRSHEITIQGDGIPKPCMTFEEASMPAYVLDEVLKCGFNSPTPIQSQGWPMALLGRDMVGISKTGSGKTLAFLLPGMIHINAQPYLQRGDGPIVLVLAPTRELAVQIKGECDKFGGSSQIKNTCVYGGVPKRTQVGDLRNGVEIVIATPGRLIDHLESGVTNLRRVTYLVMDEADRMLDMGFEPQIRKIVQQIRPDRQTLMWSATWPKEVEGLARDFLTNYYQVTVGSLELTANKAIRQLVEVVDDHDKYRRCSDFLRREFKGERVIIFVETKRGADQLTRSLRMDGYPASAIHGDKTQDERDRVLAEFRQGRCNMLVATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGVSMSYFTRKAAKMGRELIRILREAGQEVPPELEAAAMXXXXXXXXSRYGR 486
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE) HSP 1 Score: 659 bits (1701), Expect = 1.360e-228 Identity = 330/407 (81.08%), Postives = 357/407 (87.71%), Query Frame = 1
Query: 349 GIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQQXXXXXXXXXXXSRYRR 1569
GI IQGEGIPKP MTFEEASMPEYVLREV+KQGF PTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLV+APTRELAVQIKEECDKFG SS+IKNTCVYGGVPKR QV DL+RGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+ LARDFL +YYQVTVGSLEL+ANKDI+Q+IE EDF KYR L +HLQEH + G+VL+FVETKKGCDALTRSLR +G+ A IHGDK+Q ERD VL DFK G +LVATDVAARGLDVKDI+MVINFDFP ME Y+HRIGRCGRAG KG A+SFF +KNS+ REL++ILK+++ VP EL XXXX RY R
Sbjct: 10 GITIQGEGIPKPVMTFEEASMPEYVLREVLKQGFPKPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVIAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRSQVYDLSRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSELSGMAMGGGXXXXYGRYGR 416
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A7S1XL26_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XL26_9STRA) HSP 1 Score: 647 bits (1668), Expect = 1.140e-222 Identity = 311/439 (70.84%), Postives = 365/439 (83.14%), Query Frame = 1
Query: 202 DRMSGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPELQ 1518
DRM GLGA LRNI WDL +L +FEKNFY EHPDV+KR D+E AWR+ I I+G+GIPKP MTFEEASMPEYVL EV++ GF PTPIQSQGWPMAL GRDM+GISATGSGKTLAFLLPAM+HINAQPYL+ GDGPIVLV+APTRELA QIKE+CD FGRSS+IKNTCVYGG PKR Q + L RGVEI++ATPGRLID LE+G TNLRRVTYLVLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWP E+Q LARDFL + Y+V VGSL+LAANK I QI+E +D+ KY +L HL++ G+ K L+FVETK+G D LTRSL G+ A IHGDKSQ++RD+ L+ F+ G ++VATDVA+RG+DVKD+ V+NFDFP ++ DYIHRIGR GRAGA G A+SFF +K+ REL+KIL+E+D VVPP L+
Sbjct: 21 DRMGGLGANLRNIDWDLSALPQFEKNFYFEHPDVTKRPDEECNAWRKSVTITIKGDGIPKPCMTFEEASMPEYVLTEVLRLGFEKPTPIQSQGWPMALQGRDMIGISATGSGKTLAFLLPAMVHINAQPYLQPGDGPIVLVLAPTRELANQIKEQCDLFGRSSQIKNTCVYGGAPKREQAHHLRRGVEILVATPGRLIDFLENGTTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPDEIQNLARDFLKNPYEVHVGSLDLAANKAITQIVEVVDDYQKYESLLNHLRQIGN-DKCLIFVETKRGADQLTRSLSSAGFNAAAIHGDKSQQDRDWTLRQFREGARTIMVATDVASRGIDVKDVMAVVNFDFPGHIADYIHRIGRTGRAGATGKAISFFTNKDGGKARELVKILREADQVVPPGLE 458
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A7S1YW91_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YW91_TRICV) HSP 1 Score: 644 bits (1661), Expect = 1.500e-221 Identity = 320/437 (73.23%), Postives = 363/437 (83.07%), Query Frame = 1
Query: 211 SGLGAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHV-GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNVVPPEL 1515
+GLG+ L NI + L FEK+FYIEHPDV+KR D E AWR IV+ G+G+PKP MTFEEASMPEY+L EV+KQGF PTPIQSQGWPMAL GR+MVGISATGSGKTLAFLLPAMIHINAQ YL+ G+GPIVLV+APTRELAVQIKEECDKFG SS+IKNT VYGGVPK QV DL G+EIVIATPGRLID LE G TNL+RVTYLVLDEADRMLDMGFEPQ+RKI SQIRPDRQ LMWSATWP+EVQ LA D+LH YYQVTVGSL+LA NKD+ QI+E D +KYRNL RHL+E+ +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQEERD+VL++FK +LVATDVAARGLDV DI+MV+NFDFPN+ME Y+HRIGR GRAG KG+AVSFF S KN R REL++IL+ + + PEL
Sbjct: 24 TGLGSQLNNIDFAKAELVPFEKDFYIEHPDVTKRPDAEAQAWRASKQIVVIGDGVPKPCMTFEEASMPEYILTEVLKQGFDKPTPIQSQGWPMALKGRNMVGISATGSGKTLAFLLPAMIHINAQQYLKPGEGPIVLVLAPTRELAVQIKEECDKFGNSSDIKNTVVYGGVPKSRQVRDLRSGIEIVIATPGRLIDHLEQGNTNLKRVTYLVLDEADRMLDMGFEPQLRKICSQIRPDRQVLMWSATWPREVQNLASDYLHDYYQVTVGSLDLAGNKDVTQIVEVCSDQDKYRNLLRHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYVHRIGRTGRAGKKGVAVSFFVSQKNGRMARELIEILQRTSQNISPEL 460
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Match: A0A7S3NF06_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NF06_9STRA) HSP 1 Score: 643 bits (1658), Expect = 3.070e-220 Identity = 322/452 (71.24%), Postives = 370/452 (81.86%), Query Frame = 1
Query: 220 GAGLRNIQWDLESLHKFEKNFYIEHPDVSKRTDQETAAWRQKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRNLSRHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNVVPPEL---QQXXXXXXXXXXXSRYR 1566
G+GLR WD+ +L FEK FYI HPDV R+D++ WR++ I I+G G+PKP TFEEASMP+YVL EVM+ GF PTPIQSQGWPMALLGRDM+GIS TGSGKTLAFLLPAMIHINAQPYL+ GDGPIVLV+APTRELAVQIK ECDKFG SS+IKNTCVYGGV KR Q NDL RG+EIVIATPGRLID LE+G TNLRRVTYLVLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ LA DFL YYQVTVGSL+LAAN DI+QII ED KY+ + L + K+LVFVETK+G D LTRSL++D + ARCIHGDKSQ ERD+VL DF+ G +L+ATDVAARGLD+KDIQ V+NFDFP+N+EDY+HRIGRCGRAG KG A+SFF +K+ + R L+KIL+++ VPP+L Q XXXXXXX SRYR
Sbjct: 78 GSGLREQHWDMNTLPPFEKCFYIPHPDVVARSDEDCDRWRRENQISIEGRGVPKPVFTFEEASMPDYVLTEVMRCGFEKPTPIQSQGWPMALLGRDMIGISKTGSGKTLAFLLPAMIHINAQPYLQPGDGPIVLVIAPTRELAVQIKVECDKFGASSQIKNTCVYGGVSKRGQANDLERGIEIVIATPGRLIDFLENGTTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVRTLANDFLKDYYQVTVGSLDLAANTDIEQIIHVVEDATKYKRMVDFLHDRPANDKMLVFVETKRGADQLTRSLQKDRFSARCIHGDKSQAERDWVLNDFRSGKCMLLIATDVAARGLDIKDIQTVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTAKSIKWSRRLIKILQDAKQQVPPDLISMSQSSAXXXXXXXGSRYR 529 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig87.16317.1 >prot_C-linearis_contig87.16317.1 ID=prot_C-linearis_contig87.16317.1|Name=mRNA_C-linearis_contig87.16317.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=524bp MSHYGGGGGGYGGRSDDYSSRRGGGGGGYGGGGGGYGGGGGGGYGGGGGGback to top mRNA from alignment at C-linearis_contig87:715664..722128- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig87.16317.1 ID=mRNA_C-linearis_contig87.16317.1|Name=mRNA_C-linearis_contig87.16317.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6465bp|location=Sequence derived from alignment at C-linearis_contig87:715664..722128- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig87:715664..722128- >mRNA_C-linearis_contig87.16317.1 ID=mRNA_C-linearis_contig87.16317.1|Name=mRNA_C-linearis_contig87.16317.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3144bp|location=Sequence derived from alignment at C-linearis_contig87:715664..722128- (Chordaria linearis ClinC8C monoicous)back to top |