mRNA_C-linearis_contig87.16298.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 2.540e-144 Identity = 263/413 (63.68%), Postives = 291/413 (70.46%), Query Frame = 2
Query: 245 MAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAK----------------SPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVLFEGGAGGG 1435
MA + ++FD+VLRNLAGQAGSLEALLG FSFLHRNTDFYVTFDP TA+AGMGFP GKAE+LLLRAFRSFPYK YG ++Q ++ RG G P+TA T P+ GS SRK +T A +G +P ++A XXXXXXXX + P AAAG + V YT+DGKQVPIGNGGVT RYYWTQTV+EATVYVDVPPGTRSKDV C+IQPR LKL+VRGAG A E D++FDGELPSAVSREDSMWSLNDG TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTT+ISEYDGETQGAIRKIMFDQRQKSLGLPTSD+LNADA+LERAK LPGSPFLPGGVLFEG G G
Sbjct: 1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYG--VQDEQLPAAAGRGRG-PSTAKETAA--TKIGPAGGSTSRKNDTGVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKP----AAAGCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXXGAE-----DVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDCGAG 399
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA) HSP 1 Score: 270 bits (690), Expect = 4.930e-81 Identity = 167/408 (40.93%), Postives = 212/408 (51.96%), Query Frame = 2
Query: 233 RLPTMAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSP--------------LTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGT-----TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLP 1399
R M + DE+L +LA + G +E LLG FSFLHR TDFYV +DP + +A MGFP G +E++LLR FRSFP K Y + + R AG K PS AR A V AP + AA +T AS AP P P+ V YT GKQVPIGNGGVT RY WTQT+ E TVY+ VP GTR+ D+ C I P++L+L+++ ++ + I DG++P V ++SMW + D TVVI+ +K K+WW VV GDP ID + VDST +I EYD ETQGAIRKIMFDQ+QKSLGLPTSD+L +A+LE+AK +PGSPFLP
Sbjct: 2 RADAMTSFQDQSDELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDYAAEVARLEEAQGLRRPAG------------------------PKLRPSSEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPDASSSQAGPAAGTPAPKMPFPE----------VKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLK----------------------------KEPEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK) HSP 1 Score: 244 bits (623), Expect = 4.080e-71 Identity = 157/404 (38.86%), Postives = 206/404 (50.99%), Query Frame = 2
Query: 266 FDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTF-DPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPY---------------------GGGTGEQQRQRSSARGAGSPAT-ASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGV 1408
+D VL LAGQ G ++ LL FSFLHR TDFYV D AK MGF G AE++LL++FR FPYKP PA A+PV+ P I+ +E P SA A A A L A PAP P + G + V YT +G Q+PIGNGG+T YYWTQT+ E T+YVD+P GTR+KD++ I P +K++++ + + I +GE P + +SMW+L D T+VI+ EK T++WW+SV++GDPEID KVDSTT++ +YD ETQ IRKIMFDQ+QK+LGLPTS++L +LE+AK GSPFLPGG
Sbjct: 9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDNQAK--MGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADKAAPVQHEPD-------DINDSQEQKKPDGPSA---------AAAHENAGDQLQRGTA----------------PAPVPASSGPG-LEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKA----------------------------ESEAIIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGA 349
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.670e-64 Identity = 140/389 (35.99%), Postives = 204/389 (52.44%), Query Frame = 2
Query: 263 RFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISR----KKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVLFE 1417
RFD+V +LA Q+ +E +L ++F FLHR TDFYV + A MGF G+AE++LLR F+SF +KP + R++ + S A P A +P + S + E P P + + GA A + +K P T P+ R + + +DGKQ+P+ NGG T +Y W+QT+ EAT++V +P G R++D+ I P L +R + D D+I G+ P + ++S+W++++G + IS +K ++WW S + GD EIDT++VDS T+I +YD ETQG IRKIMFDQ+QK+LGLPTSD+L + ERAK PGSPFLPGG E
Sbjct: 6 RFDDVFLSLASQSDGIEGMLRIVFDFLHRRTDFYVVKE-ARDLSARMGFNDGEAERILLRTFKSFAFKPLSAAQQKTVRKKKNKIAKRSSEAAKSKAPSPVAASPQEAAASHTATVEDELPGPTEHQSVPKMDGAAGALEERESKDPATK---------------------PEEVRPS-----LKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVRKKA----------------------------DDDVILAGQWPRRIQGDESVWTVDNGI-LTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFAE 338
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA) HSP 1 Score: 216 bits (550), Expect = 5.740e-61 Identity = 142/398 (35.68%), Postives = 190/398 (47.74%), Query Frame = 2
Query: 260 QRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAG--MGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVL-------------YTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTT-----VVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPF 1393
Q FD++L ++A +AG ++ LL FSFL R TDFYV FD KA MGFP G AE+++L+AFR + + Y G Q+ Q PAT PSP P+ +K A LT P +P+ P ++ YT DGKQ PIGNGG+ YYWTQT+ + TVY+D G R KDV+C I+ + LK+ +RG +++ DG L V ++SMW+++ T +VI+ EKT +WWK V+ G EIDT+KVDST I EYD TQ AIRKIMFDQ+QK LG PTS++ DA+L +A +PGSP
Sbjct: 17 QAFDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYETVMGNQKEQ---------PAT-----------------------LPSP------------PQTPSKPTASEHLT-----------------PAAPSTPPKMSSGSXXXXXXXXXXXXXXXXXXYTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG------------------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSPI 323
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN) HSP 1 Score: 193 bits (490), Expect = 1.650e-52 Identity = 143/388 (36.86%), Postives = 192/388 (49.48%), Query Frame = 2
Query: 239 PTMAGIAQ--RFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYV-TFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPF 1393
P+MA A R DE+L +LA Q S+E+LL F FLHR TDFYV + DPV+ MGF G A++ +L AF +P R + +PVA + XXXXXXXXXX AP A V T GKQ+PIGNGG+T +Y WTQT+++ TV V VP GT +K +EC I+P+RL++ VR + + + ++ DGE P + ++S+WSL +G T+ +S EK ++WW SV+ GD EIDTS+VDST I EYD TQGAIRK MFDQ+Q+ LGLPTS++L +L +A+ P SP
Sbjct: 6 PSMAASAAPGRHDELLLSLAQQHSSIESLLDSFFDFLHRKTDFYVVSADPVSRR---MGFRPGDAQRKVLEAFGKYPL--------------------------------------------RDVDAEAPVA------------SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMQQTQAP----VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVRSSS--------------------THSTKNPSVVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSPI 310
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S4FC07_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC07_CHRCT) HSP 1 Score: 192 bits (489), Expect = 8.490e-52 Identity = 145/406 (35.71%), Postives = 210/406 (51.72%), Query Frame = 2
Query: 245 MAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTT----VVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERA---KGLP--GSPFLPGGVLFEGGAGGG 1435
M+G+ +++DEVL N+AGQ G ++ L V+FSFL+R TDF+ P MGF G AE++LL AF + Q+ QR S R A PV S G+ +++++ S+ S + P + + +S + +A P P + A +P A+A V + G VP NGG T RY W QT+ + T+ V VP GTR+KD+ CVI +L L++RG A + + + R+G I++ V ++ W+L + V + EK + WWKS +EGD EIDT+KVDST + EYDGETQGAIRKIMFD+ QK GLPTSD++ + +L +A +G P G+PF P + F+ G GGG
Sbjct: 1 MSGV-EKYDEVLMNVAGQCGGIQPLFDVIFSFLYRKTDFFHIMQPGDN----MGFSEGVAEKILLSAFHKYQKHAE---KARQELQRDSTRRQSPGAAVKPV--------DSEGTPKKEQQS------SSQKSDQSRP--DTTQSKESVVATAPVQP-----------PETAASEPKAASAPAASVPHLATGADVPY-NGGKTDRYTWEQTLHDVTIQVPVPEGTRAKDIICVISKSKLHLKIRGQPDAI-------------IDKSYPCDARNGKEIWE-----KVRVDECTWALEQAGSGRPRVSVYLEKERECWWKSALEGDQEIDTTKVDSTRSLYEYDGETQGAIRKIMFDEEQKRKGLPTSDEIQNEDLLRKAWDAEGSPFKGTPFDPSAINFKTGGGGG 352
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S0NWJ9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWJ9_9EUKA) HSP 1 Score: 187 bits (475), Expect = 1.150e-49 Identity = 145/406 (35.71%), Postives = 201/406 (49.51%), Query Frame = 2
Query: 260 QRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGE------QQRQRSSARGAGSPATASPVRLPPTATAPSSGSISR--KKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLND---GTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERA---KGLP--GSPFLPGGVLFEGGAG 1429
++FD VL +AGQ G ++ LL V FSFL+R TDF+V +P T AK MGF G AEQL+L+ F + YK + T QQ+Q PP ATA + + + ETP+ G +E A +P+ A PS P +++ +++ +Y NGG T +Y W QT+ + T+ V VP GTR++DV CVI +L L++RG A C + R+G I++ V ++ WSL G V + EK ++WWKS + GD EIDT++VDS+ + EYDGETQGAIRKIMFDQ QK GLPTSD+L + +L +A +G P G+PF P V F G G
Sbjct: 3 EKFDGVLMEVAGQCGGIQPLLDVFFSFLYRKTDFFVVMEPGTEAK--MGFADGVAEQLVLKVFHT--YKKHADSTRSKLKKQPQQQQPPXXXXXXXXXXXXXXXXPPAATASVGAATASGTRAETPNEAGTGEGGMA-----SEQSGVAAAPV-----------------AAPSTEPPASQSRIKEIQDVY----------NGGKTSKYTWEQTLHDVTLQVPVPAGTRARDVVCVITKTKLSLKIRGHEEALIDTCYPC-------------DARNGQEIWE-----KVRADECTWSLEQSSAGPQVSVYLEKEREAWWKSALHGDNEIDTTQVDSSRSMYEYDGETQGAIRKIMFDQDQKRKGLPTSDELKNEDLLRQAWDAEGSPFKGTPFDPSKVNFNAGGG 354
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.830e-46 Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 2
Query: 821 KQVPIGNGGVTPR--YYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLN-DGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVL 1411
KQ P+GNGG P Y WTQT+ E TVYVDVP GTR +D+ C I R L +++GAG G+ + +E + F +A++ S+W+L+ D +V++ EK K+WW +EG PEIDTSKVDST ++ +YD +TQ AIRKIMFDQ+QK +GLPTSD+L A +LE+AK PGSPF+PGG L
Sbjct: 89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAG-----------------GQQASKE-----IPF-----TALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGGPL 261
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: B8BPW1_THAPS (CS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPW1_THAPS) HSP 1 Score: 178 bits (451), Expect = 7.380e-46 Identity = 135/395 (34.18%), Postives = 197/395 (49.87%), Query Frame = 2
Query: 278 LRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAG--MGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSG-SISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSL-------NDGT----TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGS--PFLPGGVLF 1414
L NL+G G L L FSFL+R TDFY + +G MGF G+AEQ+L+ +FR FP + G Q+ G+P+ ++ V A APS+ ++ +T + + V+ A +A KS +++ A + +P + A + YT +GKQVP+GNGG RY WTQT++E T+++ +P GTR+KD+ I L + A A A AG GGG + S + +G L V + W+L ND T T+ ++ +K K+WW +V+ GDP IDT+ VDST I YD +TQ IR+IMFDQRQ+ LGLP+SD++ + + G GS P LP GV +
Sbjct: 30 LANLSG--GDLRKLFYAFFSFLNRRTDFYCILPDDGSGASGRNMGFKEGQAEQILIASFRQFPLRRVGNKKAPPQKHD------GTPSASNSV----AADAPSAKVEVAESPKTITSTTSPSSEEVKAVQPASDEATTKSDNSNS-------ETVDTNKAVATITSKPKKDEANKNTIRYTDEGKQVPVGNGGSATRYVWTQTLEEVTIHIPLPEGTRAKDLNVDIAASTLSIHQTDAAFAKSDAAAVAGVGGGGVSPSSF-------VPLEGTLFGKVRPAECTWTLESTKSNNNDETHNMTTLQLTLDKIQKTWWSTVLSGDPIIDTTMVDSTRHIDTYDEKTQAQIRRIMFDQRQEQLGLPSSDKIMGEERSVSSGGDGGSKVPTLPSGVEY 398 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig87.16298.1 >prot_C-linearis_contig87.16298.1 ID=prot_C-linearis_contig87.16298.1|Name=mRNA_C-linearis_contig87.16298.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=426bp MAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKback to top mRNA from alignment at C-linearis_contig87:527466..529819- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig87.16298.1 ID=mRNA_C-linearis_contig87.16298.1|Name=mRNA_C-linearis_contig87.16298.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2354bp|location=Sequence derived from alignment at C-linearis_contig87:527466..529819- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig87:527466..529819- >mRNA_C-linearis_contig87.16298.1 ID=mRNA_C-linearis_contig87.16298.1|Name=mRNA_C-linearis_contig87.16298.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at C-linearis_contig87:527466..529819- (Chordaria linearis ClinC8C monoicous)back to top |