mRNA_C-linearis_contig87.16298.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig87.16298.1
Unique NamemRNA_C-linearis_contig87.16298.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 2.540e-144
Identity = 263/413 (63.68%), Postives = 291/413 (70.46%), Query Frame = 2
Query:  245 MAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAK----------------SPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVLFEGGAGGG 1435
            MA + ++FD+VLRNLAGQAGSLEALLG  FSFLHRNTDFYVTFDP  TA+AGMGFP GKAE+LLLRAFRSFPYK YG    ++Q   ++ RG G P+TA       T   P+ GS SRK +T    A  +G                                +P   ++A   XXXXXXXX    +  P    AAAG + V YT+DGKQVPIGNGGVT RYYWTQTV+EATVYVDVPPGTRSKDV C+IQPR LKL+VRGAG A                    E     D++FDGELPSAVSREDSMWSLNDG TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTT+ISEYDGETQGAIRKIMFDQRQKSLGLPTSD+LNADA+LERAK LPGSPFLPGGVLFEG  G G
Sbjct:    1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYG--VQDEQLPAAAGRGRG-PSTAKETAA--TKIGPAGGSTSRKNDTGVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKP----AAAGCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXXGAE-----DVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDCGAG 399          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA)

HSP 1 Score: 270 bits (690), Expect = 4.930e-81
Identity = 167/408 (40.93%), Postives = 212/408 (51.96%), Query Frame = 2
Query:  233 RLPTMAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSP--------------LTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGT-----TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLP 1399
            R   M     + DE+L +LA + G +E LLG  FSFLHR TDFYV +DP +  +A MGFP G +E++LLR FRSFP K Y       +  +   R AG                         K  PS  AR A   V  AP    + AA                 +T   AS           AP  P P+          V YT  GKQVPIGNGGVT RY WTQT+ E TVY+ VP GTR+ D+ C I P++L+L+++                            ++ + I DG++P  V  ++SMW + D       TVVI+ +K  K+WW  VV GDP ID + VDST +I EYD ETQGAIRKIMFDQ+QKSLGLPTSD+L  +A+LE+AK +PGSPFLP
Sbjct:    2 RADAMTSFQDQSDELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDYAAEVARLEEAQGLRRPAG------------------------PKLRPSSEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPDASSSQAGPAAGTPAPKMPFPE----------VKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLK----------------------------KEPEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK)

HSP 1 Score: 244 bits (623), Expect = 4.080e-71
Identity = 157/404 (38.86%), Postives = 206/404 (50.99%), Query Frame = 2
Query:  266 FDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTF-DPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPY---------------------GGGTGEQQRQRSSARGAGSPAT-ASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGV 1408
            +D VL  LAGQ G ++ LL   FSFLHR TDFYV   D    AK  MGF  G AE++LL++FR FPYKP                                         PA  A+PV+  P         I+  +E   P   SA         A A   A   L    A                PAP P  +  G + V YT +G Q+PIGNGG+T  YYWTQT+ E T+YVD+P GTR+KD++  I P  +K++++                             + + I +GE P   +  +SMW+L D  T+VI+ EK T++WW+SV++GDPEID  KVDSTT++ +YD ETQ  IRKIMFDQ+QK+LGLPTS++L    +LE+AK   GSPFLPGG 
Sbjct:    9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDNQAK--MGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADKAAPVQHEPD-------DINDSQEQKKPDGPSA---------AAAHENAGDQLQRGTA----------------PAPVPASSGPG-LEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKA----------------------------ESEAIIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGA 349          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.670e-64
Identity = 140/389 (35.99%), Postives = 204/389 (52.44%), Query Frame = 2
Query:  263 RFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISR----KKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVLFE 1417
            RFD+V  +LA Q+  +E +L ++F FLHR TDFYV  +      A MGF  G+AE++LLR F+SF +KP      +  R++ +     S   A      P A +P   + S     + E P P    +   + GA  A  +  +K P T                      P+  R +     +   +DGKQ+P+ NGG T +Y W+QT+ EAT++V +P G R++D+   I P  L +R +                             D D+I  G+ P  +  ++S+W++++G  + IS +K  ++WW S + GD EIDT++VDS T+I +YD ETQG IRKIMFDQ+QK+LGLPTSD+L    + ERAK  PGSPFLPGG   E
Sbjct:    6 RFDDVFLSLASQSDGIEGMLRIVFDFLHRRTDFYVVKE-ARDLSARMGFNDGEAERILLRTFKSFAFKPLSAAQQKTVRKKKNKIAKRSSEAAKSKAPSPVAASPQEAAASHTATVEDELPGPTEHQSVPKMDGAAGALEERESKDPATK---------------------PEEVRPS-----LKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVRKKA----------------------------DDDVILAGQWPRRIQGDESVWTVDNGI-LTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFAE 338          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 5.740e-61
Identity = 142/398 (35.68%), Postives = 190/398 (47.74%), Query Frame = 2
Query:  260 QRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAG--MGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVL-------------YTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTT-----VVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPF 1393
            Q FD++L ++A +AG ++ LL   FSFL R TDFYV FD     KA   MGFP G AE+++L+AFR +  + Y    G Q+ Q         PAT                        PSP            P+  +K  A   LT                 P +P+  P  ++                    YT DGKQ PIGNGG+   YYWTQT+ + TVY+D   G R KDV+C I+ + LK+ +RG                              +++ DG L   V  ++SMW+++  T      +VI+ EKT  +WWK V+ G  EIDT+KVDST  I EYD  TQ AIRKIMFDQ+QK LG PTS++   DA+L +A  +PGSP 
Sbjct:   17 QAFDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYETVMGNQKEQ---------PAT-----------------------LPSP------------PQTPSKPTASEHLT-----------------PAAPSTPPKMSSGSXXXXXXXXXXXXXXXXXXYTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG------------------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSPI 323          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN)

HSP 1 Score: 193 bits (490), Expect = 1.650e-52
Identity = 143/388 (36.86%), Postives = 192/388 (49.48%), Query Frame = 2
Query:  239 PTMAGIAQ--RFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYV-TFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPF 1393
            P+MA  A   R DE+L +LA Q  S+E+LL   F FLHR TDFYV + DPV+     MGF  G A++ +L AF  +P                                             R  +  +PVA            +                 XXXXXXXXXX     AP     A     V  T  GKQ+PIGNGG+T +Y WTQT+++ TV V VP GT +K +EC I+P+RL++ VR +                     +   +    ++ DGE P  +  ++S+WSL +G T+ +S EK  ++WW SV+ GD EIDTS+VDST  I EYD  TQGAIRK MFDQ+Q+ LGLPTS++L    +L +A+  P SP 
Sbjct:    6 PSMAASAAPGRHDELLLSLAQQHSSIESLLDSFFDFLHRKTDFYVVSADPVSRR---MGFRPGDAQRKVLEAFGKYPL--------------------------------------------RDVDAEAPVA------------SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMQQTQAP----VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVRSSS--------------------THSTKNPSVVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSPI 310          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S4FC07_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC07_CHRCT)

HSP 1 Score: 192 bits (489), Expect = 8.490e-52
Identity = 145/406 (35.71%), Postives = 210/406 (51.72%), Query Frame = 2
Query:  245 MAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGTT----VVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERA---KGLP--GSPFLPGGVLFEGGAGGG 1435
            M+G+ +++DEVL N+AGQ G ++ L  V+FSFL+R TDF+    P       MGF  G AE++LL AF  +           Q+ QR S R     A   PV         S G+  +++++      S+  S +  P  +   + +S + +A   P           P + A +P  A+A    V +   G  VP  NGG T RY W QT+ + T+ V VP GTR+KD+ CVI   +L L++RG   A              + +    + R+G  I++      V  ++  W+L    +    V +  EK  + WWKS +EGD EIDT+KVDST  + EYDGETQGAIRKIMFD+ QK  GLPTSD++  + +L +A   +G P  G+PF P  + F+ G GGG
Sbjct:    1 MSGV-EKYDEVLMNVAGQCGGIQPLFDVIFSFLYRKTDFFHIMQPGDN----MGFSEGVAEKILLSAFHKYQKHAE---KARQELQRDSTRRQSPGAAVKPV--------DSEGTPKKEQQS------SSQKSDQSRP--DTTQSKESVVATAPVQP-----------PETAASEPKAASAPAASVPHLATGADVPY-NGGKTDRYTWEQTLHDVTIQVPVPEGTRAKDIICVISKSKLHLKIRGQPDAI-------------IDKSYPCDARNGKEIWE-----KVRVDECTWALEQAGSGRPRVSVYLEKERECWWKSALEGDQEIDTTKVDSTRSLYEYDGETQGAIRKIMFDEEQKRKGLPTSDEIQNEDLLRKAWDAEGSPFKGTPFDPSAINFKTGGGGG 352          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A7S0NWJ9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWJ9_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 1.150e-49
Identity = 145/406 (35.71%), Postives = 201/406 (49.51%), Query Frame = 2
Query:  260 QRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGE------QQRQRSSARGAGSPATASPVRLPPTATAPSSGSISR--KKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLND---GTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERA---KGLP--GSPFLPGGVLFEGGAG 1429
            ++FD VL  +AGQ G ++ LL V FSFL+R TDF+V  +P T AK  MGF  G AEQL+L+ F +  YK +   T        QQ+Q                  PP ATA    + +   + ETP+      G        +E    A +P+                 A PS  P  +++   +++ +Y          NGG T +Y W QT+ + T+ V VP GTR++DV CVI   +L L++RG   A    C                + R+G  I++      V  ++  WSL     G  V +  EK  ++WWKS + GD EIDT++VDS+  + EYDGETQGAIRKIMFDQ QK  GLPTSD+L  + +L +A   +G P  G+PF P  V F  G G
Sbjct:    3 EKFDGVLMEVAGQCGGIQPLLDVFFSFLYRKTDFFVVMEPGTEAK--MGFADGVAEQLVLKVFHT--YKKHADSTRSKLKKQPQQQQPPXXXXXXXXXXXXXXXXPPAATASVGAATASGTRAETPNEAGTGEGGMA-----SEQSGVAAAPV-----------------AAPSTEPPASQSRIKEIQDVY----------NGGKTSKYTWEQTLHDVTLQVPVPAGTRARDVVCVITKTKLSLKIRGHEEALIDTCYPC-------------DARNGQEIWE-----KVRADECTWSLEQSSAGPQVSVYLEKEREAWWKSALHGDNEIDTTQVDSSRSMYEYDGETQGAIRKIMFDQDQKRKGLPTSDELKNEDLLRQAWDAEGSPFKGTPFDPSKVNFNAGGG 354          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.830e-46
Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 2
Query:  821 KQVPIGNGGVTPR--YYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLN-DGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVL 1411
            KQ P+GNGG  P   Y WTQT+ E TVYVDVP GTR +D+ C I  R L  +++GAG                 G+ + +E     + F     +A++   S+W+L+ D   +V++ EK  K+WW   +EG PEIDTSKVDST ++ +YD +TQ AIRKIMFDQ+QK +GLPTSD+L A  +LE+AK  PGSPF+PGG L
Sbjct:   89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAG-----------------GQQASKE-----IPF-----TALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGGPL 261          
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Match: B8BPW1_THAPS (CS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPW1_THAPS)

HSP 1 Score: 178 bits (451), Expect = 7.380e-46
Identity = 135/395 (34.18%), Postives = 197/395 (49.87%), Query Frame = 2
Query:  278 LRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAKAG--MGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATASPVRLPPTATAPSSG-SISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPLTSALASPXXXXXXXXXXAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNGGVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAATGGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSL-------NDGT----TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLERAKGLPGS--PFLPGGVLF 1414
            L NL+G  G L  L    FSFL+R TDFY       +  +G  MGF  G+AEQ+L+ +FR FP +  G      Q+        G+P+ ++ V     A APS+   ++   +T +     +   V+    A  +A  KS  +++              A  +   +P +  A    + YT +GKQVP+GNGG   RY WTQT++E T+++ +P GTR+KD+   I    L +    A  A   A   AG GGG +   S        +  +G L   V   +  W+L       ND T    T+ ++ +K  K+WW +V+ GDP IDT+ VDST  I  YD +TQ  IR+IMFDQRQ+ LGLP+SD++  +     + G  GS  P LP GV +
Sbjct:   30 LANLSG--GDLRKLFYAFFSFLNRRTDFYCILPDDGSGASGRNMGFKEGQAEQILIASFRQFPLRRVGNKKAPPQKHD------GTPSASNSV----AADAPSAKVEVAESPKTITSTTSPSSEEVKAVQPASDEATTKSDNSNS-------ETVDTNKAVATITSKPKKDEANKNTIRYTDEGKQVPVGNGGSATRYVWTQTLEEVTIHIPLPEGTRAKDLNVDIAASTLSIHQTDAAFAKSDAAAVAGVGGGGVSPSSF-------VPLEGTLFGKVRPAECTWTLESTKSNNNDETHNMTTLQLTLDKIQKTWWSTVLSGDPIIDTTMVDSTRHIDTYDEKTQAQIRRIMFDQRQEQLGLPSSDKIMGEERSVSSGGDGGSKVPTLPSGVEY 398          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ97_9PHAE2.540e-14463.68CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2SV46_9STRA4.930e-8140.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XL32_HETAK4.080e-7138.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9U371_9STRA1.670e-6435.99Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3H6E3_9STRA5.740e-6135.68Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A2D4C6K1_PYTIN1.650e-5236.86CS domain-containing protein n=2 Tax=Pythium insid... [more]
A0A7S4FC07_CHRCT8.490e-5235.71Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0NWJ9_9EUKA1.150e-4935.71Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A835Z5P8_9STRA1.830e-4647.50Nuclear migration protein nudC-like protein n=1 Ta... [more]
B8BPW1_THAPS7.380e-4634.18CS domain-containing protein n=1 Tax=Thalassiosira... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:527466..529819 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.6
Seed ortholog evalue6.6e-123
Seed eggNOG ortholog2880.D8LL35
Preferred nameNUDCD3
KEGG koko:K21867
KEGG TC1.A.1.4
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005868,GO:0005875,GO:0006457,GO:0006810,GO:0006996,GO:0007097,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044380,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044782,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0060271,GO:0070727,GO:0070925,GO:0071539,GO:0071840,GO:0072698,GO:0120031,GO:0120036,GO:1902494,GO:1905508,GO:1905793
EggNOG free text desc.unfolded protein binding
EggNOG OGsKOG2265@1,KOG2265@2759
Ec32 ortholog descriptionHSP20-like chaperone
Ec32 orthologEc-26_003380.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size2040
Cds size1278
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16298.1prot_C-linearis_contig87.16298.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig87 527984..529575 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930671.2907436-UTR-C-linearis_contig87:527465..5279831622930671.2907436-UTR-C-linearis_contig87:527465..527983Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 527466..527983 -
1690881188.5346751-UTR-C-linearis_contig87:527465..5279831690881188.5346751-UTR-C-linearis_contig87:527465..527983Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 527466..527983 -
1622930671.3590326-UTR-C-linearis_contig87:529575..5298191622930671.3590326-UTR-C-linearis_contig87:529575..529819Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 529576..529819 -
1690881188.5630798-UTR-C-linearis_contig87:529575..5298191690881188.5630798-UTR-C-linearis_contig87:529575..529819Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 529576..529819 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930671.3276136-CDS-C-linearis_contig87:527983..5282771622930671.3276136-CDS-C-linearis_contig87:527983..528277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 527984..528277 -
1690881188.5458086-CDS-C-linearis_contig87:527983..5282771690881188.5458086-CDS-C-linearis_contig87:527983..528277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 527984..528277 -
1622930671.3438253-CDS-C-linearis_contig87:528591..5295751622930671.3438253-CDS-C-linearis_contig87:528591..529575Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 528592..529575 -
1690881188.5543792-CDS-C-linearis_contig87:528591..5295751690881188.5543792-CDS-C-linearis_contig87:528591..529575Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 528592..529575 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig87.16298.1

>prot_C-linearis_contig87.16298.1 ID=prot_C-linearis_contig87.16298.1|Name=mRNA_C-linearis_contig87.16298.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=426bp
MAGIAQRFDEVLRNLAGQAGSLEALLGVLFSFLHRNTDFYVTFDPVTTAK
AGMGFPTGKAEQLLLRAFRSFPYKPYGGGTGEQQRQRSSARGAGSPATAS
PVRLPPTATAPSSGSISRKKETPSPVARSAGNSVRGAPKAEAKAAAKSPL
TSALASPPAPPAAAGGGAPPSPAPQPNRAAAGDMRVLYTKDGKQVPIGNG
GVTPRYYWTQTVDEATVYVDVPPGTRSKDVECVIQPRRLKLRVRGAGAAT
GGACKAAGEGGGALGRDSKEEERDGDLIFDGELPSAVSREDSMWSLNDGT
TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIM
FDQRQKSLGLPTSDQLNADAVLERAKGLPGSPFLPGGVLFEGGAGGGDGG
AGVGDGDGGDGRLAPDGGDRDPPDP*
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mRNA from alignment at C-linearis_contig87:527466..529819-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig87.16298.1 ID=mRNA_C-linearis_contig87.16298.1|Name=mRNA_C-linearis_contig87.16298.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2354bp|location=Sequence derived from alignment at C-linearis_contig87:527466..529819- (Chordaria linearis ClinC8C monoicous)
CCTTCTCATCTCTCATCGCTAAATTACGAACCAAGGGTAGGGCCACAGCC ATCTCTCTTCCTCTCCCGTGCCGTTGATTGGATGTCAGCTACGCGTTATT TTGGGTACAGCAGTACATAGAGAAAGAGGGAGTGAGAGAGAGATAAACAC AGAGACCGAGACAGAGACGGAAACCAAACGCCCCCTTTCCAGGAACCAGG GCCACCTTCACGCGTAACACCGGAAGATCGGACGCCTCCCAACGATGGCG GGCATCGCGCAGAGATTTGACGAGGTGCTGAGGAATCTCGCAGGGCAGGC CGGATCCCTGGAGGCCCTGCTCGGGGTGCTCTTCTCCTTCCTCCACCGCA ACACCGATTTCTACGTCACCTTCGATCCGGTCACGACGGCCAAGGCAGGC ATGGGCTTTCCTACCGGGAAAGCGGAGCAGCTCCTCCTCCGAGCGTTCCG ATCTTTCCCGTACAAGCCGTACGGCGGAGGTACCGGCGAGCAGCAGCGGC AGCGGTCGTCAGCAAGAGGGGCGGGGAGTCCAGCAACGGCGTCACCGGTA CGTTTACCGCCGACAGCGACCGCACCCTCGAGCGGCTCGATCTCGCGCAA GAAGGAGACGCCCTCTCCTGTTGCCCGAAGTGCCGGCAACTCTGTGCGAG GAGCTCCCAAGGCCGAGGCTAAAGCGGCCGCGAAATCACCCTTAACCTCT GCTTTGGCATCGCCTCCAGCGCCACCAGCAGCAGCCGGGGGAGGTGCTCC TCCCTCACCTGCCCCACAGCCAAATCGGGCGGCGGCGGGGGACATGCGAG TGCTCTACACGAAGGATGGGAAGCAGGTGCCGATCGGCAACGGGGGCGTG ACCCCCAGATACTACTGGACGCAGACGGTGGACGAGGCAACGGTTTACGT CGACGTACCTCCCGGCACGCGCTCGAAGGATGTGGAATGCGTCATCCAGC CTCGACGGCTGAAGCTTAGGGTCAGAGGGGCGGGAGCAGCAACCGGGGGC GCCTGCAAAGCGGCGGGGGAGGGAGGAGGTGCACTTGGTAGGGATAGCAA AGAGGAGGAGCGCGACGGAGACTTGATCTTCGATGGTGAGTTGCCGAGCG CAGTTTCGCGGGAGGATAGCATGTGGAGCCTGAACGACGGAACAACGGTG GTGATCTCGTTTGAGAAGACCACCAAGTCGTGGTGGAAGAGCGTTGTCGA GGGGGATCCGGAGATTGATACCTCAAAGGTGAGCACATCTGTCGTAGAAA GGGATTCGGGACAAAGGGGGTGTGTAGGCAACGTCTGGTAGTCGATCGGG GATCATCTGCGGTCGTATGAAGTATTCCGGTGTCCCTTGCGCCTTGATCT CTACTCTATTGCTGTGTCCTATCCTCGTTGTGTGTGTATCGGTGTCCCGT CGACAGCCGTGGGCAATGTAGCATCAAACCCGCCACCCCTCCTGGCTCGT CGGCAATCGCTTGTTCTGAAAAAAAAGAAAAAAAGAAGTCCTCTCTTGCC TATCCTCCATCCGCCCCTTGGTTGCCCTGCTTTTTTTTTAAGGTCGACTC GACCACGAGGATCAGCGAGTACGACGGCGAGACGCAGGGCGCTATCCGCA AGATCATGTTCGACCAGCGGCAGAAGTCGCTCGGCCTTCCCACGAGCGAC CAGCTCAACGCCGACGCCGTGCTGGAGAGGGCCAAAGGCTTACCGGGCAG CCCTTTCCTTCCGGGCGGGGTCTTGTTCGAGGGCGGCGCAGGAGGTGGCG ATGGCGGTGCTGGTGTTGGTGATGGTGATGGTGGCGACGGTCGTCTCGCC CCGGATGGTGGCGATCGAGATCCACCAGATCCGTAGGTACTGAAATAGAT GCTCCAGCGCTCGACGTGACTTCTGCCTGTCCAAATCTAGTTGTTGGAAG GCAGAGAGGTACTACTGCTGTAGTCACGCAAGGAAGCAGCAGGAATCGAT CATGGATGGATGTGGTGTTTCGAGGGAAAATGGCATCAGATTGCTGTGTT TTAACTTTGGTTGTGTGGTCGAGACCCACCCGGCTACGTAGACCTACCTT TATTGAGTCTTCCATTTCGCCAAGTCACGTAGAGAGGTATTTCTGGACAC TCCCATGAGGCATCGGGTTTTTGGATGTGCCAAGTAGTTGTTTGCCGTGA AAGACTGCTGCACAGAAAATGGAGGCGCAGCTGGTTCCTACATAGTAACC GAGTTCTGAGGTGTTCCTTTGTCTGTGTGCCAATAAATCGCCGAGCTGGC CAGTTGAGAACATGCCGTTGGACAAGAACATGCTTGTGCACACGCTTTGG CAGTCTCAGACGCCCCAGCGAAAACAGCACCCCATATATTGCTTACCCCA AACC
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Coding sequence (CDS) from alignment at C-linearis_contig87:527466..529819-

>mRNA_C-linearis_contig87.16298.1 ID=mRNA_C-linearis_contig87.16298.1|Name=mRNA_C-linearis_contig87.16298.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at C-linearis_contig87:527466..529819- (Chordaria linearis ClinC8C monoicous)
ATGGCGGGCATCGCGCAGAGATTTGACGAGGTGCTGAGGAATCTCGCAGG
GCAGGCCGGATCCCTGGAGGCCCTGCTCGGGGTGCTCTTCTCCTTCCTCC
ACCGCAACACCGATTTCTACGTCACCTTCGATCCGGTCACGACGGCCAAG
GCAGGCATGGGCTTTCCTACCGGGAAAGCGGAGCAGCTCCTCCTCCGAGC
GTTCCGATCTTTCCCGTACAAGCCGTACGGCGGAGGTACCGGCGAGCAGC
AGCGGCAGCGGTCGTCAGCAAGAGGGGCGGGGAGTCCAGCAACGGCGTCA
CCGGTACGTTTACCGCCGACAGCGACCGCACCCTCGAGCGGCTCGATCTC
GCGCAAGAAGGAGACGCCCTCTCCTGTTGCCCGAAGTGCCGGCAACTCTG
TGCGAGGAGCTCCCAAGGCCGAGGCTAAAGCGGCCGCGAAATCACCCTTA
ACCTCTGCTTTGGCATCGCCTCCAGCGCCACCAGCAGCAGCCGGGGGAGG
TGCTCCTCCCTCACCTGCCCCACAGCCAAATCGGGCGGCGGCGGGGGACA
TGCGAGTGCTCTACACGAAGGATGGGAAGCAGGTGCCGATCGGCAACGGG
GGCGTGACCCCCAGATACTACTGGACGCAGACGGTGGACGAGGCAACGGT
TTACGTCGACGTACCTCCCGGCACGCGCTCGAAGGATGTGGAATGCGTCA
TCCAGCCTCGACGGCTGAAGCTTAGGGTCAGAGGGGCGGGAGCAGCAACC
GGGGGCGCCTGCAAAGCGGCGGGGGAGGGAGGAGGTGCACTTGGTAGGGA
TAGCAAAGAGGAGGAGCGCGACGGAGACTTGATCTTCGATGGTGAGTTGC
CGAGCGCAGTTTCGCGGGAGGATAGCATGTGGAGCCTGAACGACGGAACA
ACGGTGGTGATCTCGTTTGAGAAGACCACCAAGTCGTGGTGGAAGAGCGT
TGTCGAGGGGGATCCGGAGATTGATACCTCAAAGATGGCGGGCATCGCGC
AGAGATTTGACGAGGTGCTGAGGAATCTCGCAGGGCAGGCCGGATCCCTG
GAGGCCCTGCTCGGGGTGCTCTTCTCCTTCCTCCACCGCAACACCGATTT
CTACGTCACCTTCGATCCGGTCACGACGGCCAAGGCAGGCATGGGCTTTC
CTACCGGGAAAGCGGAGCAGCTCCTCCTCCGAGCGTTCCGATCTTTCCCG
TACAAGCCGTACGGCGGAGGTACCGGCGAGCAGCAGCGGCAGCGGTCGTC
AGCAAGAGGGGCGGGGAGTCCAGCAACGGCGTCACCGGTACGTTTACCGC
CGACAGCGACCGCACCCTCGAGCGGCTCGATCTCGCGCAAGAAGGAGACG
CCCTCTCCTGTTGCCCGAAGTGCCGGCAACTCTGTGCGAGGAGCTCCCAA
GGCCGAGGCTAAAGCGGCCGCGAAATCACCCTTAACCTCTGCTTTGGCAT
CGCCTCCAGCGCCACCAGCAGCAGCCGGGGGAGGTGCTCCTCCCTCACCT
GCCCCACAGCCAAATCGGGCGGCGGCGGGGGACATGCGAGTGCTCTACAC
GAAGGATGGGAAGCAGGTGCCGATCGGCAACGGGGGCGTGACCCCCAGAT
ACTACTGGACGCAGACGGTGGACGAGGCAACGGTTTACGTCGACGTACCT
CCCGGCACGCGCTCGAAGGATGTGGAATGCGTCATCCAGCCTCGACGGCT
GAAGCTTAGGGTCAGAGGGGCGGGAGCAGCAACCGGGGGCGCCTGCAAAG
CGGCGGGGGAGGGAGGAGGTGCACTTGGTAGGGATAGCAAAGAGGAGGAG
CGCGACGGAGACTTGATCTTCGATGGTGAGTTGCCGAGCGCAGTTTCGCG
GGAGGATAGCATGTGGAGCCTGAACGACGGAACAACGGTGGTGATCTCGT
TTGAGAAGACCACCAAGTCGTGGTGGAAGAGCGTTGTCGAGGGGGATCCG
GAGATTGATACCTCAAAGGTCGACTCGACCACGAGGATCAGCGAGTACGA
CGGCGAGACGCAGGGCGCTATCCGCAAGATCATGTTCGACCAGCGGCAGA
AGTCGCTCGGCCTTCCCACGAGCGACCAGCTCAACGCCGACGCCGTGCTG
GAGAGGGCCAAAGGCTTACCGGGCAGCCCTTTCCTTCCGGGCGGGGTCTT
GTTCGAGGGCGGCGCAGGAGGTGGCGATGGCGGTGCTGGTGTTGGTGATG
GTGATGGTGGCGACGGTCGTCTCGCCCCGGATGGTGGCGATCGAGATCCA
CCAGATCCGTAGGTCGACTCGACCACGAGGATCAGCGAGTACGACGGCGA
GACGCAGGGCGCTATCCGCAAGATCATGTTCGACCAGCGGCAGAAGTCGC
TCGGCCTTCCCACGAGCGACCAGCTCAACGCCGACGCCGTGCTGGAGAGG
GCCAAAGGCTTACCGGGCAGCCCTTTCCTTCCGGGCGGGGTCTTGTTCGA
GGGCGGCGCAGGAGGTGGCGATGGCGGTGCTGGTGTTGGTGATGGTGATG
GTGGCGACGGTCGTCTCGCCCCGGATGGTGGCGATCGAGATCCACCAGAT
CCGTAG
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