mRNA_C-linearis_contig87.16296.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig87.16296.1
Unique NamemRNA_C-linearis_contig87.16296.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: D8LL37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL37_ECTSI)

HSP 1 Score: 665 bits (1716), Expect = 7.490e-236
Identity = 315/353 (89.24%), Postives = 336/353 (95.18%), Query Frame = 1
Query:    1 MALVSTEAQLRSMSPGPERFMTMNLMSSGPCTMSKGATSYGRTVRRMNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNKPDRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGEPLANPTTPLYKESACIEAEAQLDKSIAAAE 1059
            MALVSTE QLRSMS GPERFMTMNLMSSGPCT+SK ATSYGRTVRR+NTRDNHTTADVDGA+TFVRTSTLTNKPDSYGVADI GT SMRLHKDTNKPDRQLYHDDIEGS  RN++LFRT RC++PLEPEYTLPSF TAP +APKFTRDS+DVSDIEGTKS+PLYPLEQRH+ LVDDIEGAQSGWKPRHRRARHE+APLD+CLNVSDITGGGFRTRR TNPLTPSYRVNGMDVADDPVK+RPRALPKAKDGPFYPLTTADIEGA PGWRPLPQVNPP+EARRHFRNTNF+GD+PGAQADTVKHSICT+RH+NPLNPVY SLDGEPLANP TPLYKE AC+EAEAQLD+SIAA E
Sbjct:    1 MALVSTETQLRSMSAGPERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGAQTFVRTSTLTNKPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNKWLFRTTRCIDPLEPEYTLPSFTTAPPIAPKFTRDSHDVSDIEGTKSRPLYPLEQRHNTLVDDIEGAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTQRHVNPLNPVYDSLDGEPLANPQTPLYKEPACVEAEAQLDRSIAAEE 353          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: A0A6H5K072_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K072_9PHAE)

HSP 1 Score: 620 bits (1599), Expect = 4.130e-218
Identity = 298/353 (84.42%), Postives = 317/353 (89.80%), Query Frame = 1
Query:    1 MALVSTEAQLRSMSPGPERFMTMNLMSSGPCTMSKGATSYGRTVRRMNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNKPDRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGEPLANPTTPLYKESACIEAEAQLDKSIAAAE 1059
            MALVSTE QLRSMS GPERFMTMNLMSSGPCT+SK ATSYGRTVRR+NTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADI GT SMRLHKDTNKPDRQLYHDDIEGS  RN++ FRT RC++PLEPEYTLPSF TA  +APKFTRDS+DVSDIEGTKS+                  AQSGWKPRHRRARHE+APLD+CLNVSDITGGGFRTRR TNPLTPSYRVNGMDVADDPVK+RPRALPKAKDGPFYPLTTADIEGA PGWRPLPQVNPP+EARRHFRNTNF+GD+PGAQADTVKHSICTERH+NPL+PVY SLDGEPLANP TPLYKE AC+EAEAQLD+SIAA E
Sbjct:    1 MALVSTETQLRSMSAGPERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNQWRFRTTRCIDPLEPEYTLPSFTTATPIAPKFTRDSHDVSDIEGTKSRXXXXXXXXXXXXXXXXXXAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTERHVNPLDPVYDSLDGEPLANPQTPLYKEPACVEAEAQLDRSIAAEE 353          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: A0A836CFT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT1_9STRA)

HSP 1 Score: 383 bits (984), Expect = 3.880e-126
Identity = 180/329 (54.71%), Postives = 230/329 (69.91%), Query Frame = 1
Query:   43 PGPERFMTMNLMSSGPCTMSKGATSYGRTVRRMNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNKPDRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGEPLANPTTPLYKESACIEAEA 1029
            P P  + TMNL + G CT+ K  TS G TVRR+ TRD     D+DGART +  + +T +PD Y V DI G CS+RLH+++NKPD  L   D+ G   R R   RT+R V+PL+P+Y LPS+  AP   PKF RDSY V DIEGT  KPLY  +QR           + GWKPRH RAR E+ PLDY LNV DIT  GF+T+R TNPL P YR  G ++ADDPV++RPRALP  K+ PF+ LTTADIEGA PGW+P  Q++PP+E RRH+RNTN++GD+ GA AD+V+H+I T+RH++PLNP+Y SLDGEP+  PT+P Y+ +A  +A A
Sbjct:    4 PLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 332          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: A0A7S1UJ89_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ89_9STRA)

HSP 1 Score: 266 bits (679), Expect = 2.010e-79
Identity = 149/330 (45.15%), Postives = 190/330 (57.58%), Query Frame = 1
Query:   58 FMTMNLMSSGPCTMSKGATSYGRTVRRMNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNKPDRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRA-RHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGEPLANPTTPLYKESACIEAEAQLDKS 1044
            + TMN+ +SGPCT+     +  R V +  TR  + T D+DGA+ F+R +  TNKPDS+ +                                R      TKR V+PL P YTLPSF  AP        D+  V DI GT SKPLYP  QR +H VDDIEGAQSGWKPR+R     E  P    L+VSDI   GF++ R+T+P  P + VNGM + DD     P+ LP  K+ PF+ L + DIEGA  GW P   + P IE RRHFRNTNF+GD+ GAQ+DTVKH+I T+R++NPLNP Y SLDG  L  P  P+Y + A +EA A ++ S
Sbjct:    9 WQTMNITTSGPCTVE----TANRLVTK--TRATNRTDDIDGAKPFLRYTQFTNKPDSFQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPSRFLSTKRRVDPLVPTYTLPSFRKAPAPEQPHYSDTMKVEDIAGTHSKPLYPFPQRINHKVDDIEGAQSGWKPRYRNVFMTEERPSS--LDVSDIAKEGFKSTRVTDPNRPVHYVNGMTIQDDLRYCMPKRLPPQKNTPFFSLQSNDIEGAVSGWVPPHALRPAIEDRRHFRNTNFVGDIEGAQSDTVKHTIRTKRNVNPLNPYYRSLDGILLDPPCRPMYHDPAVLEATAHMEAS 330          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: F0YFZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFZ5_AURAN)

HSP 1 Score: 265 bits (676), Expect = 3.830e-78
Identity = 135/245 (55.10%), Postives = 167/245 (68.16%), Query Frame = 1
Query:  262 MRLH-KDTNKPDRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGEPLANPTTP 993
            M+LH +     DR L   DIEGSK R    F+T+R VNPL PEYTLPS        PKF RD Y +SDIEGT  +  +   QR ++ V DIEGAQ+GW+PRH R R E  P+D  LNV DI   GF+T R+T+PL P++R+NGM+V DD V+T P+ LPK  DGP   L T DIEGA  GW+P  ++ PP+E RRHFRNTN++GD+ GAQ DTVKHSI T+R  NPL+P Y SLDG+ L +PT P
Sbjct:    1 MKLHPRGVGGVDR-LAETDIEGSKPRP-LHFKTERHVNPLCPEYTLPSCALDMPPVPKFVRDGYGISDIEGTAPRSRFRFAQRETYDVKDIEGAQAGWRPRHERVRREGPPMD-SLNVKDINDIGFKTTRVTDPLRPTHRINGMEVKDDMVRTMPKKLPKPHDGPTLSLYTDDIEGARCGWKPPHEMQPPLEKRRHFRNTNYIGDITGAQPDTVKHSIRTQRETNPLHPAYRSLDGDLLGDPTQP 242          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: A0A7S3ZUA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA3_9STRA)

HSP 1 Score: 253 bits (647), Expect = 8.940e-76
Identity = 139/316 (43.99%), Postives = 187/316 (59.18%), Query Frame = 1
Query:   52 ERFMTMNLMSSGPCTMSKGATSYGRTVRRMNTRDNHTTADVDGARTFVRTSTLT-NKPDSYGVADIFGTCSMRLHKDTNKPDRQLYHDD-IEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGEPLANPTTP 993
            +RF TM+L S+G CT++          R     +++   D+DGA   ++    T  +PD Y   DI  +  M+LH    +P+   +H++ IEGSK R    F++ R  +PL PEY LP         PKF RD Y V+DI+GT  K                  AQ+ W+PRH RAR E+ P D  L+V DI   GF T R+T+P+ P Y +NGM+  DDP++T+PRALPKA  GP+  L T DI GA  GWRP  ++ PP E RRH+R+TNF+GD+ GAQADTV+H+I T+R  NPLNP Y SLDG+ L +PT P
Sbjct:    9 DRFQTMSLQSAGACTIANKE-------RPACAHESNYVGDIDGAAPELKYMRYTARRPDLYVTKDIEKSSPMKLHARGPQPNPNEWHNNPIEGSKPRET-RFKSNRHTDPLAPEYVLPRCKLEKPPTPKFIRDGYTVTDIDGTVPKXXXXXXXXXXXXXXXXXXAQASWRPRHERARREAPPRD-GLDVRDIMDEGFTTTRVTDPMNPHYFMNGMETCDDPIRTKPRALPKAIPGPYRSLYTDDILGAKSGWRPPHEMQPPPEKRRHWRHTNFVGDIGGAQADTVQHTIPTKRRTNPLNPAYRSLDGDILPDPTKP 315          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: A0A2D4CDY6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY6_PYTIN)

HSP 1 Score: 214 bits (546), Expect = 1.130e-59
Identity = 129/277 (46.57%), Postives = 158/277 (57.04%), Query Frame = 1
Query:  157 HTT---ADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNK--PDRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQV-NPPIEARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDGE 969
            HTT   +D+ GAR  ++     NKP  +   DI G+CS  LH    +   D +     IEGS  R    FRT R VNP+EPEY LPSF  AP + PKF RDSYDVSDI GT  KP      R    VDDI GAQ+GW P HRRA  E  P D  L+V+DI    F++ R+T+ L P Y+VNGM   DD + + P+ L   ++ P Y   TADI GA P       V N P E RRHFR TN   D+ GA ADTV HSI + R ++P  P Y +LDG+
Sbjct:   43 HTTNDISDIAGARPLLKDHVYVNKPHFHEPNDIPGSCSKELHPKHRRVGSDDRFKQLHIEGSSPRPSG-FRTNRVVNPMEPEYKLPSFQAAPPLIPKFLRDSYDVSDIAGTSFKPKVITNPRSPLRVDDIAGAQAGWLPFHRRASREHPPRD-ILDVADIVNVDFKSSRVTDVLNPVYKVNGMTYQDDAL-SHPKLLHPQRNKPSYAXQTADIAGANPFDASKTVVGNIPNEKRRHFRQTNRTDDITGATADTVMHSIRSNRRVDPTWPDYVALDGQ 316          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: A0A2P4X5K5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5K5_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.370e-58
Identity = 121/255 (47.45%), Postives = 153/255 (60.00%), Query Frame = 1
Query:  214 NKPDSYGVADIFGTCSMRLHKDTNKP--DRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPI--EARRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDG 966
            NKP  Y V DI G+ SM LH    +   D +     IEG+ +     F T R VNPLEP Y LPSF  AP+V PKF RDSY+VSDIEGT  K       R    ++DI GAQ+GW PRH+R   E+ P D  LNV+DIT   F++ R+TN L P Y VNGM +ADDP+ +RP A    +D P + L T DI+GA     P   +   I    RR FR+TN   D+ GA+ADT+ HSI + RHI+P++P Y+ LDG
Sbjct:    4 NKPHFYDVHDIKGSTSMELHPKNWRAGSDDRFKQLPIEGTTSHPAG-FHTNRVVNPLEPNYKLPSFTKAPSVEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKLNDIAGAQAGWLPRHKRGLRENPPRD-ILNVTDITNVDFKSSRVTNVLNPVYSVNGMTIADDPL-SRPLAQHPKRDKPNFTLRTDDIDGAGCS-DPATAIVAGIIMSKRRDFRDTNVTSDITGAKADTLLHSIRSTRHIDPISPKYSGLDG 254          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: W2QK96_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK96_PHYPN)

HSP 1 Score: 207 bits (527), Expect = 8.110e-57
Identity = 124/282 (43.97%), Postives = 162/282 (57.45%), Query Frame = 1
Query:  130 VRRMNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLH-KDTNKPDRQLYHD-DIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEA-RRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDG 966
            ++R   R  +   D+ G R  ++     NKP  Y   DI G+ SM LH K+        +    IEG+ +R    FRT+R VNPL+P Y LPSF  AP + PKF RDSY+VSDIEGT  K       R    +DDI GAQ+GW PRH+R   E  P D  LNV DIT   F++ R+TN L P Y VNGM V+DDP+    +  PK +D P Y L T DIEGA+        V   + A RR++R+TN   D+ GA+ADT+ HSI + R ++P  P Y++LDG
Sbjct:   35 LKRNPDRVTNDVTDIRGTRPLLKNHMYVNKPHFYDAHDIKGSTSMELHPKNWRAGSEDRFKQLPIEGTTSRPAG-FRTERVVNPLQPNYKLPSFTKAPPIEPKFLRDSYNVSDIEGTSIKVRDIQHPRDGLKLDDIAGAQAGWLPRHKRGLREHPPRD-ILNVQDITNVDFKSSRVTNVLNPVYTVNGMTVSDDPLSQPLKQHPK-RDKPSYALKTDDIEGASCTDPATAVVAGIVMAHRRNYRDTNITSDISGAKADTLVHSIRSTRRVDPNAPQYSALDG 313          
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Match: G4Z4F7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F7_PHYSP)

HSP 1 Score: 207 bits (526), Expect = 1.050e-56
Identity = 125/269 (46.47%), Postives = 156/269 (57.99%), Query Frame = 1
Query:  169 DVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNKP--DRQLYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSYDVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDYCLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDGPFYPLTTADIEGAAPGWRPLPQVNPPIEA-RRHFRNTNFLGDVPGAQADTVKHSICTERHINPLNPVYASLDG 966
            D+ GAR  ++     NK   Y   DI G+ SM LH    +   D +     IEG+ ++    FRT R VNPLEP Y LPSFV AP + PKF RDSY+VSDIEGT  K       R    VDDI G Q GW PRH+R   E+ P D  LNV DIT   FR+ R+TN L P Y VNGM  ADDP+ +RP      +D P Y L T DIEGA+        V   + A RR+FR+TN   D+ GA+ADT+ HSI + R ++P  P+Y++LDG
Sbjct:   48 DILGARPLLKNHVYVNKLHFYDAHDIKGSTSMELHPKNWRAGSDNRFKQLPIEGTTSQPAG-FRTDRVVNPLEPNYKLPSFVKAPPLEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKVDDIAGTQCGWLPRHKRGLRENPPRD-ILNVQDITNVDFRSSRVTNVLNPVYTVNGMTFADDPL-SRPLVQHPKRDKPNYALKTDDIEGASCADPATAIVAGIVMAHRRNFRDTNVTKDITGAKADTLLHSIRSTRRVDPNAPLYSALDG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL37_ECTSI7.490e-23689.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K072_9PHAE4.130e-21884.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFT1_9STRA3.880e-12654.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UJ89_9STRA2.010e-7945.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YFZ5_AURAN3.830e-7855.10Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZUA3_9STRA8.940e-7643.99Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A2D4CDY6_PYTIN1.130e-5946.57Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A2P4X5K5_9STRA1.370e-5847.45Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
W2QK96_PHYPN8.110e-5743.97Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
G4Z4F7_PHYSP1.050e-5646.47Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:515469..518356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score665.2
Seed ortholog evalue2.8e-188
Seed eggNOG ortholog2880.D8LL37
Hectar predicted targeting categoryother localisation
EggNOG OGs2C1R0@1,2RZH6@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_003400.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1800
Cds size1800
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16296.1prot_C-linearis_contig87.16296.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig87 515469..518356 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930671.0769727-CDS-C-linearis_contig87:515468..5167341622930671.0769727-CDS-C-linearis_contig87:515468..516734Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 515469..516734 -
1690881188.4257326-CDS-C-linearis_contig87:515468..5167341690881188.4257326-CDS-C-linearis_contig87:515468..516734Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 515469..516734 -
1622930671.0948184-CDS-C-linearis_contig87:517306..5176001622930671.0948184-CDS-C-linearis_contig87:517306..517600Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 517307..517600 -
1690881188.438481-CDS-C-linearis_contig87:517306..5176001690881188.438481-CDS-C-linearis_contig87:517306..517600Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 517307..517600 -
1622930671.1084402-CDS-C-linearis_contig87:518116..5183561622930671.1084402-CDS-C-linearis_contig87:518116..518356Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 518117..518356 -
1690881188.448893-CDS-C-linearis_contig87:518116..5183561690881188.448893-CDS-C-linearis_contig87:518116..518356Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 518117..518356 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig87.16296.1

>prot_C-linearis_contig87.16296.1 ID=prot_C-linearis_contig87.16296.1|Name=mRNA_C-linearis_contig87.16296.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=600bp
MALVSTEAQLRSMSPGPERFMTMNLMSSGPCTMSKGATSYGRTVRRMNTR
DNHTTADVDGARTFVRTSTLTNKPDSYGVADIFGTCSMRLHKDTNKPDRQ
LYHDDIEGSKARNRFLFRTKRCVNPLEPEYTLPSFVTAPTVAPKFTRDSY
DVSDIEGTKSKPLYPLEQRHSHLVDDIEGAQSGWKPRHRRARHESAPLDY
CLNVSDITGGGFRTRRLTNPLTPSYRVNGMDVADDPVKTRPRALPKAKDG
PFYPLTTADIEGAAPGWRPLPQVNPPIEARRHFRNTNFLGDVPGAQADTV
KHSICTERHINPLNPVYASLDGEPLANPTTPLYKESACIEAEAQLDKSIA
AAESAAAAAATTTTTAAAAAGASPTTSNGQAPARVSNQDDEFRQQVSPSQ
HSPQQQQAWDAPMKQRPSSEPPRSARTSAGGSGRGGSGGGRRGRVSGDES
SIKQGGAAATGAMSSARNGGRVAPSRTRTSDSEKEECIRRLESEIRLLRK
KDEEAWQSRPAAPGTRVLAPPSSGNTNSSFRRSSSGGSGSGGGGGGGMVI
QSRGNHGSQQAERLVLRSANGTPRVPLTPSERRSAREYIDDVSSVRDLQ*
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mRNA from alignment at C-linearis_contig87:515469..518356-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig87.16296.1 ID=mRNA_C-linearis_contig87.16296.1|Name=mRNA_C-linearis_contig87.16296.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2888bp|location=Sequence derived from alignment at C-linearis_contig87:515469..518356- (Chordaria linearis ClinC8C monoicous)
ATGGCGCTCGTCAGTACCGAGGCGCAGCTTCGCTCCATGTCTCCTGGGCC CGAACGATTCATGACAATGAATCTCATGTCCTCGGGTCCTTGTACCATGA GCAAGGGTGCTACATCGTACGGGAGGACAGTTCGCAGGATGAACACGAGG GACAATCACACCACGGCCGATGTGGACGGTGCGCGGACCTTCGTCCGCAC GAGTACGCTAACCAACAAGCCTGATTCCTATGGCGTCGCGGTGAGATTAC ATATAAACTACACATACATGCAGGGAAGAGTTGGAATATTTTTTTGTGAA GGTCGTGTTTGGCTGCTGCTGTGTGTGAATCGCTCGGAACCATGTTCGTT CTGCGTCCTACCCGGAGTATGCGCCGGCATCGGTGTATACGCAGTCTGGG GGAGTAAGCGTCAAGGAGGAGCGCCTGTGTTCTAAGCGGTAAACTACAAA CACACACAGCAGCACACAGCTACAAAATCCAAAGGATGGTCCGTACACAT GATTACAACAGCAGCGTCAATGTACGTTTGAAAAAAAATCGCATCCATAT TCCATCACGGGCCGTGGGAATTACCTACATGAGACTTCAGCAGGTGTTTC GAAAGAATATGTCCTCTTGTCCATTTCAAAAGGAACACCTGCCGGCAAAG TTCATCTGAAATATCTTCTGCGACCGTACGTAGAGCATGCCAACGTATCG GAAATTCTTCACATATATCTGCAGCTCTCTCATCCCCCCCGCCCTCCCTC GCGCAGGACATTTTTGGCACGTGTTCTATGCGCTTGCACAAGGACACCAA CAAGCCGGACCGCCAGCTCTACCACGACGATATCGAGGGGAGCAAAGCTC GTAACAGGTTTTTGTTCCGCACGAAACGCTGCGTCAACCCCCTTGAGCCC GAATATACGCTCCCGTCCTTCGTCACCGCGCCGACGGTGGCCCCGAAGTT CACGCGGGACTCATACGATGTGTCGGACATAGAGGGCACAAAATCAAAGC CGCTGTACCCCCTGGAGCAGAGGCATAGCCACCTCGTGGATGATATCGAG GTAAGCGGGGATGAGTTGGGGTAAGTGCGGTGCTGTTTTTCGTTGCTGAA TAGGACTGGTGTCCCGCTCTAGCTAGGTGCTTTGCTTGCTCCGCGTTGCC GAGGTCATGAATAGTAATAACGTACCCACACGATTTGAAGATTGAATGAA CCTCATCACAAGAGTCATTTAGTTTTTCATTGTTTCTCCCACCTATTGGG CAGCACAAAACCATAGGTACTACCTCAAGTTCGTGATGCGATACACCAGT TTTGGGTAGGCTGTGCGATGGTCGTTTTTTTTGTTTTTGTTTTTTTTCTC GCCCAATAATGTTTTTTCGTAGCCTGCCTCCTATCTTCACTACAAGTAGC TAGGCTACCATCCGGGGTCACACAGGATGGGATGTCTCCACCTACCTCCT GCGGTGCATGCCTTTCATGCTTTTTATCGCGAGCAGGGTTCAGCACTCCC TACCCTCGTCAAAAATGACGTCGAATGGTGTAGATACATGTCCTGTTTTT CAGGAAGCCGCCGGCGTAGCGATGATTCCACTTTCCTTCAAAACTGCACA CGATATCATCGCTGGAACACAGGGAGCACAGTCCGGCTGGAAGCCGAGGC ACCGGCGTGCTCGGCACGAGTCCGCCCCGCTCGACTACTGTCTCAACGTG AGCGACATCACCGGCGGCGGGTTTCGCACCCGGAGGCTCACGAATCCCCT CACTCCCAGCTACCGCGTGAACGGAATGGACGTAGCAGACGACCCGGTCA AGACCCGGCCGCGCGCCCTCCCAAAGGCGAAGGACGGCCCGTTCTACCCC CTGACCACCGCCGACATCGAGGGGGCGGCCCCGGGGTGGAGGCCTCTCCC CCAGGTGAACCCTCCGATTGAGGCGCGGCGGCACTTCCGGAACACGAATT TTTTGGGGGACGTGCCGGGTGCCCAGGCCGATACCGTCAAGCACTCCATC TGCACCGAGCGGCACATCAACCCTCTGAACCCGGTGTACGCCAGCCTGGA CGGCGAGCCGCTGGCGAACCCCACGACACCACTGTACAAGGAATCCGCCT GCATCGAGGCCGAGGCGCAGCTGGACAAATCAATCGCCGCTGCGGAATCT GCCGCCGCCGCGGCCGCCACCACCACCACCACCGCTGCCGCTGCCGCAGG GGCCTCGCCCACTACGAGCAACGGTCAAGCACCCGCCCGGGTCAGCAACC AAGACGACGAGTTCCGTCAACAGGTATCGCCATCGCAACACAGCCCACAG CAGCAACAAGCCTGGGACGCACCCATGAAGCAGCGCCCATCTTCCGAGCC GCCGCGGTCAGCCCGCACCAGCGCCGGTGGCAGTGGCAGAGGCGGCAGCG GAGGGGGCAGGCGCGGCCGGGTTTCCGGTGACGAGTCCAGCATCAAGCAA GGAGGTGCTGCGGCGACGGGGGCGATGTCGAGCGCGAGGAACGGGGGCCG CGTCGCTCCCAGCAGGACCCGCACCAGCGACAGCGAGAAAGAGGAATGCA TTCGGCGGCTCGAAAGCGAGATCCGATTGTTGCGAAAGAAGGACGAGGAG GCTTGGCAGAGTAGACCAGCAGCACCTGGAACTAGGGTCCTTGCCCCCCC GAGCAGCGGCAACACCAATAGTAGTTTCCGCAGGAGCAGCAGCGGCGGCA GCGGCAGCGGAGGAGGAGGAGGGGGGGGCATGGTGATACAGTCCCGCGGG AACCACGGCAGCCAGCAGGCGGAGAGACTGGTCCTGCGGAGCGCGAACGG AACGCCGCGGGTGCCGTTGACCCCTTCGGAGAGAAGGTCGGCTAGAGAGT ACATCGACGACGTCAGCTCCGTTCGCGATCTGCAGTGA
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Coding sequence (CDS) from alignment at C-linearis_contig87:515469..518356-

>mRNA_C-linearis_contig87.16296.1 ID=mRNA_C-linearis_contig87.16296.1|Name=mRNA_C-linearis_contig87.16296.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3600bp|location=Sequence derived from alignment at C-linearis_contig87:515469..518356- (Chordaria linearis ClinC8C monoicous)
ATGGCGCTCGTCAGTACCGAGGCGCAGCTTCGCTCCATGTCTCCTGGGCC
CGAACGATTCATGACAATGAATCTCATGTCCTCGGGTCCTTGTACCATGA
GCAAGGGTGCTACATCGTACGGGAGGACAGTTCGCAGGATGAACACGAGG
GACAATCACACCACGGCCGATGTGGACGGTGCGCGGACCTTCGTCCGCAC
GAGTACGCTAACCAACAAGCCTGATTCCTATGGCGTCGCGATGGCGCTCG
TCAGTACCGAGGCGCAGCTTCGCTCCATGTCTCCTGGGCCCGAACGATTC
ATGACAATGAATCTCATGTCCTCGGGTCCTTGTACCATGAGCAAGGGTGC
TACATCGTACGGGAGGACAGTTCGCAGGATGAACACGAGGGACAATCACA
CCACGGCCGATGTGGACGGTGCGCGGACCTTCGTCCGCACGAGTACGCTA
ACCAACAAGCCTGATTCCTATGGCGTCGCGGACATTTTTGGCACGTGTTC
TATGCGCTTGCACAAGGACACCAACAAGCCGGACCGCCAGCTCTACCACG
ACGATATCGAGGGGAGCAAAGCTCGTAACAGGTTTTTGTTCCGCACGAAA
CGCTGCGTCAACCCCCTTGAGCCCGAATATACGCTCCCGTCCTTCGTCAC
CGCGCCGACGGTGGCCCCGAAGTTCACGCGGGACTCATACGATGTGTCGG
ACATAGAGGGCACAAAATCAAAGCCGCTGTACCCCCTGGAGCAGAGGCAT
AGCCACCTCGTGGATGATATCGAGGACATTTTTGGCACGTGTTCTATGCG
CTTGCACAAGGACACCAACAAGCCGGACCGCCAGCTCTACCACGACGATA
TCGAGGGGAGCAAAGCTCGTAACAGGTTTTTGTTCCGCACGAAACGCTGC
GTCAACCCCCTTGAGCCCGAATATACGCTCCCGTCCTTCGTCACCGCGCC
GACGGTGGCCCCGAAGTTCACGCGGGACTCATACGATGTGTCGGACATAG
AGGGCACAAAATCAAAGCCGCTGTACCCCCTGGAGCAGAGGCATAGCCAC
CTCGTGGATGATATCGAGGGAGCACAGTCCGGCTGGAAGCCGAGGCACCG
GCGTGCTCGGCACGAGTCCGCCCCGCTCGACTACTGTCTCAACGTGAGCG
ACATCACCGGCGGCGGGTTTCGCACCCGGAGGCTCACGAATCCCCTCACT
CCCAGCTACCGCGTGAACGGAATGGACGTAGCAGACGACCCGGTCAAGAC
CCGGCCGCGCGCCCTCCCAAAGGCGAAGGACGGCCCGTTCTACCCCCTGA
CCACCGCCGACATCGAGGGGGCGGCCCCGGGGTGGAGGCCTCTCCCCCAG
GTGAACCCTCCGATTGAGGCGCGGCGGCACTTCCGGAACACGAATTTTTT
GGGGGACGTGCCGGGTGCCCAGGCCGATACCGTCAAGCACTCCATCTGCA
CCGAGCGGCACATCAACCCTCTGAACCCGGTGTACGCCAGCCTGGACGGC
GAGCCGCTGGCGAACCCCACGACACCACTGTACAAGGAATCCGCCTGCAT
CGAGGCCGAGGCGCAGCTGGACAAATCAATCGCCGCTGCGGAATCTGCCG
CCGCCGCGGCCGCCACCACCACCACCACCGCTGCCGCTGCCGCAGGGGCC
TCGCCCACTACGAGCAACGGTCAAGCACCCGCCCGGGTCAGCAACCAAGA
CGACGAGTTCCGTCAACAGGTATCGCCATCGCAACACAGCCCACAGCAGC
AACAAGCCTGGGACGCACCCATGAAGCAGCGCCCATCTTCCGAGCCGCCG
CGGTCAGCCCGCACCAGCGCCGGTGGCAGTGGCAGAGGCGGCAGCGGAGG
GGGCAGGCGCGGCCGGGTTTCCGGTGACGAGTCCAGCATCAAGCAAGGAG
GTGCTGCGGCGACGGGGGCGATGTCGAGCGCGAGGAACGGGGGCCGCGTC
GCTCCCAGCAGGACCCGCACCAGCGACAGCGAGAAAGAGGAATGCATTCG
GCGGCTCGAAAGCGAGATCCGATTGTTGCGAAAGAAGGACGAGGAGGCTT
GGCAGAGTAGACCAGCAGCACCTGGAACTAGGGTCCTTGCCCCCCCGAGC
AGCGGCAACACCAATAGTAGTTTCCGCAGGAGCAGCAGCGGCGGCAGCGG
CAGCGGAGGAGGAGGAGGGGGGGGCATGGTGATACAGTCCCGCGGGAACC
ACGGCAGCCAGCAGGCGGAGAGACTGGTCCTGCGGAGCGCGAACGGAACG
CCGCGGGTGCCGTTGACCCCTTCGGAGAGAAGGTCGGCTAGAGAGTACAT
CGACGACGTCAGCTCCGTTCGCGATCTGCAGTGAGGAGCACAGTCCGGCT
GGAAGCCGAGGCACCGGCGTGCTCGGCACGAGTCCGCCCCGCTCGACTAC
TGTCTCAACGTGAGCGACATCACCGGCGGCGGGTTTCGCACCCGGAGGCT
CACGAATCCCCTCACTCCCAGCTACCGCGTGAACGGAATGGACGTAGCAG
ACGACCCGGTCAAGACCCGGCCGCGCGCCCTCCCAAAGGCGAAGGACGGC
CCGTTCTACCCCCTGACCACCGCCGACATCGAGGGGGCGGCCCCGGGGTG
GAGGCCTCTCCCCCAGGTGAACCCTCCGATTGAGGCGCGGCGGCACTTCC
GGAACACGAATTTTTTGGGGGACGTGCCGGGTGCCCAGGCCGATACCGTC
AAGCACTCCATCTGCACCGAGCGGCACATCAACCCTCTGAACCCGGTGTA
CGCCAGCCTGGACGGCGAGCCGCTGGCGAACCCCACGACACCACTGTACA
AGGAATCCGCCTGCATCGAGGCCGAGGCGCAGCTGGACAAATCAATCGCC
GCTGCGGAATCTGCCGCCGCCGCGGCCGCCACCACCACCACCACCGCTGC
CGCTGCCGCAGGGGCCTCGCCCACTACGAGCAACGGTCAAGCACCCGCCC
GGGTCAGCAACCAAGACGACGAGTTCCGTCAACAGGTATCGCCATCGCAA
CACAGCCCACAGCAGCAACAAGCCTGGGACGCACCCATGAAGCAGCGCCC
ATCTTCCGAGCCGCCGCGGTCAGCCCGCACCAGCGCCGGTGGCAGTGGCA
GAGGCGGCAGCGGAGGGGGCAGGCGCGGCCGGGTTTCCGGTGACGAGTCC
AGCATCAAGCAAGGAGGTGCTGCGGCGACGGGGGCGATGTCGAGCGCGAG
GAACGGGGGCCGCGTCGCTCCCAGCAGGACCCGCACCAGCGACAGCGAGA
AAGAGGAATGCATTCGGCGGCTCGAAAGCGAGATCCGATTGTTGCGAAAG
AAGGACGAGGAGGCTTGGCAGAGTAGACCAGCAGCACCTGGAACTAGGGT
CCTTGCCCCCCCGAGCAGCGGCAACACCAATAGTAGTTTCCGCAGGAGCA
GCAGCGGCGGCAGCGGCAGCGGAGGAGGAGGAGGGGGGGGCATGGTGATA
CAGTCCCGCGGGAACCACGGCAGCCAGCAGGCGGAGAGACTGGTCCTGCG
GAGCGCGAACGGAACGCCGCGGGTGCCGTTGACCCCTTCGGAGAGAAGGT
CGGCTAGAGAGTACATCGACGACGTCAGCTCCGTTCGCGATCTGCAGTGA
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