mRNA_C-linearis_contig87.16294.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig87.16294.1
Unique Name	mRNA_C-linearis_contig87.16294.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: D8LP55_ECTSI (EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP55_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.160e-28
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 2

Query:   14 FSPFGAGTV*NP*AYVGHE------ARRHLAQLQKQTVLERQFSRCNACGDRIQLHPHANCDADHIIGVYRGDKTVPANMQLLCVKCHRNKFARGANXXXXXXXAPRTVEL 328
            F P  +GT   P AY+G        AR+HL + QK  +LERQ SRCN+CGDRI+++P+A+CDADHIIGV RG KTVP NM LLC+ CHR K    A         PRTV++
Sbjct:    5 FLPVFSGTGSKPVAYIGPSLNLRPVARKHLTRPQKWAILERQRSRCNSCGDRIRIYPYADCDADHIIGVCRGGKTVPENMNLLCLPCHRRKTCLEAGGL------PRTVDV 109

[Close]

BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: Q8QNP5_ESV1K (EsV-1-16 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP5_ESV1K)

HSP 1 Score: 108 bits (269), Expect = 2.060e-26
Identity = 56/111 (50.45%), Postives = 68/111 (61.26%), Query Frame = 2

Query:   14 FSPFGAGTV*NP*AYVGHE------ARRHLAQLQKQTVLERQFSRCNACGDRIQLHPHANCDADHIIGVYRGDKTVPANMQLLCVKCHRNKFARGANXXXXXXXAPRTVEL 328
            F P  +GT   P AY+G        AR+HL + QK  +LERQ SRCN+ GDRI ++P+ANCDADHII V RG KT+P NM LLC+ CHR K    A         PRTV +
Sbjct:    5 FLPVFSGTASKPVAYIGPSHNLRPVARKHLTRPQKWAILERQRSRCNSYGDRIHIYPYANCDADHIISVCRGGKTLPENMNLLCLPCHRRKTCLEAGGL------PRTVNV 109

[Close]

BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: D7G322_ECTSI (EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G322_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.320e-8
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 1

Query:  262 QQICARGKRXXXXXXXTSDSRA---SLEPGDTHVYIVTPEKIAFPFPVDKRTPLEAIQDGCGLSLLAFKRVDRTFVEDAYAEVDF 507
            Q +C R  R           R    +LEPGD++VYI T   +  P   DKRTPLEAI DGC LS++ +KRV+R  V+     VD+
Sbjct:   85 QMLCVRCHRQKTCLEAGGSPRTVEVALEPGDSNVYIFTGGTMDLP--CDKRTPLEAIGDGCALSIITYKRVNRKVVKVVDEGVDY 167

[Close]

BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Match: A0A7J4KB49_9ARCH (HNH endonuclease n=2 Tax=Archaea TaxID=2157 RepID=A0A7J4KB49_9ARCH)

HSP 1 Score: 53.1 bits (126), Expect = 7.930e-6
Identity = 30/88 (34.09%), Postives = 47/88 (53.41%), Query Frame = 2

Query:    5 STRFSPFGAGTV*NP*AYVGHEARRHLAQLQKQTVLERQFSRCNACGDRIQLHPHANCDADHIIGVYRGDKTVPANMQLLCVKCHRNK 268
            ++ F+P+ +         V  ++RR  +  Q++ +   Q ++C  CG  I+L    N D DHII    G KT+ AN Q +C+KCHR K
Sbjct:   35 NSGFNPYNSNKK------VDRDSRRTFSVTQRKELKSTQNNKCKICG--IELSDD-NIDYDHIIPWEDGGKTIVANGQAICLKCHREK 113

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot

BLAST of mRNA_C-linearis_contig87.16294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LP55_ECTSI	1.160e-28	52.25	EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
Q8QNP5_ESV1K	2.060e-26	50.45	EsV-1-16 n=1 Tax=Ectocarpus siliculosus virus 1 (i...	[more]
D7G322_ECTSI	3.320e-8	42.35	EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
A0A7J4KB49_9ARCH	7.930e-6	34.09	HNH endonuclease n=2 Tax=Archaea TaxID=2157 RepID=...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig87	contig	C-linearis_contig87:456638..472008 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	525
Cds size	273
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig87.16294.1	prot_C-linearis_contig87.16294.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig87 456890..472008 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930670.9991505-UTR-C-linearis_contig87:456637..456889	1622930670.9991505-UTR-C-linearis_contig87:456637..456889	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig87 456638..456889 +
1690881188.39334-UTR-C-linearis_contig87:456637..456889	1690881188.39334-UTR-C-linearis_contig87:456637..456889	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig87 456638..456889 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930671.0123727-CDS-C-linearis_contig87:456889..457024	1622930671.0123727-CDS-C-linearis_contig87:456889..457024	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig87 456890..457024 +
1690881188.4052515-CDS-C-linearis_contig87:456889..457024	1690881188.4052515-CDS-C-linearis_contig87:456889..457024	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig87 456890..457024 +
1622930671.0289521-CDS-C-linearis_contig87:471870..472008	1622930671.0289521-CDS-C-linearis_contig87:471870..472008	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig87 471871..472008 +
1690881188.4140844-CDS-C-linearis_contig87:471870..472008	1690881188.4140844-CDS-C-linearis_contig87:471870..472008	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig87 471871..472008 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig87:456638..472008+
coding sequence from alignment at C-linearis_contig87:456638..472008+

protein sequence of mRNA_C-linearis_contig87.16294.1

>prot_C-linearis_contig87.16294.1 ID=prot_C-linearis_contig87.16294.1|Name=mRNA_C-linearis_contig87.16294.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=91bp
MPPQQICARGKRGKRGKRGTSDSRASLEPGDTHVYIVTPEKIAFPFPVDK
RTPLEAIQDGCGLSLLAFKRVDRTFVEDAYAEVDFGGNVGK

mRNA from alignment at C-linearis_contig87:456638..472008+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig87.16294.1 ID=mRNA_C-linearis_contig87.16294.1|Name=mRNA_C-linearis_contig87.16294.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15371bp|location=Sequence derived from alignment at C-linearis_contig87:456638..472008+ (Chordaria linearis ClinC8C monoicous)
ATGAAGTACGCGTTTCTCCCCGTTTGGAGCGGGAACGGTCTAAAACCCGT
AAGCCTACGTCGGACATGAGGCGCGGAGACACTTGGCACAACTGCAAAAG
CAAACCGTTTTGGAACGCCAATTTTCGCGCTGTAACGCTTGTGGCGATCG
AATCCAACTTCACCCCCACGCAAATTGCGACGCAGACCATATTATCGGAG
TCTACCGAGGCGACAAAACGGTGCCCGCTAACATGCAGCTGCTCTGCGTT
AAATGCCACCGCAACAAATTTGCGCGCGGGGCAAACGGGGCAAGCGGGGC
AAGCGGGGCACCTCGGACAGTCGAGCTTCGTTGGAACCGGGTGACACGCA
CGTGTACATCGTCACGCCTGAAAAAATAGCCTTTCCCGTATAGAAGAGGG
TCTCGCTCGATGGCGATTACAAGTTGTTGTGGATTGCCTTTGCTCGCTCT
AAGGAATGTTGACAGGGCAGCTAGAAATTATGATATAGGGTTTCGCTTGA
TGTTCCAAAATTTTGTTGTCAAACCTGCCTCGGAAACCTTACGTTGAGTG
ATTGTCTTGTATCCGGTATCCTCCGTCACCGTACCAATTGAAATTTTCTT
CCCCATCTTTGAATACTCAAGTCGATTTCAGCCACACGACCGGAATACCG
TCTCTAACGGGACGATACCTCGAAAAACAATTGCGGCGGTTTAAAGCAGA
CACCTTGCCATCGGCGTGGAATCGAGCTTCGGCTAAAGAACCAACCCCTC
TCGAGCATGCATAATGAAAGGCAAGATTTGCCGGACCAGGTTTCGGTTCG
GTGTACGCCGCTGTCATTCCACCCGGATAACTTTTATGCATGCAGCTCAT
ATTCGTTGGTTCACCGGAATACGGACAAATCCACGAGTTATTGGAGAGCC
TTCTTGTTGCGACCAACCCTTTGCCTTCACCGGGGATCGTTGAGTCTTTG
ATTTTCACGTCGTTTTTTATGGAGTTGTGCAACCAGCACATCGGTGAACC
GAAACATACTCTGTTCTTGCACCGGTTCCCGTGTGCCCTCGTGTGCGTAC
ACTGGCCGCACGTCAGCGGGCATGACCAGTCCGCAGTTCGGTAAGATAGC
TCTGTTGGCGCTCGTTTACGCGCAGGCATGTGTTTACGTGATACTATTCG
TTAAAAAAATACCACGCTCGCGGTGGTTCCCGGGTACCCCGTCCCTCCCT
CCCTCTCCCCCCCCCTCATCTCTGCATCCCGTGTGCGCCATGGAAAGAAC
CTGCCGACACTTCCTTGGCATTTGCTGGCGCCTATACATCCCATTCTACA
GGCGCGTCAGCGTACTTAATCGTGAGCTCTACTCCTTTCTCGATGTTTTC
AAGCGCCTTGATCGAGCACGTGTACCAAGGCCCATACTCGGCACCTCCGA
TAGCCTCGAACCAATCCGGCGTCGCGGCGTCGCCTACGGAGAGCTCTACA
TTCGGTGATTTCGAGTGATTGAGAAGCCGTAAGAGCCTAATGCCGTTGTC
CGCTTCGCATGCGAACACGTTGCCCCGCATTTTTCGGCCTGGATCAATTG
CGAGCGCGCTTTGTTCGTCTGCATGCATGATGTGCGAGTAGCAGCTGTAG
TTTGCATTGGCAAAGGCTTCCTCGACTTGCTCATCTGGAAGAAGTGCAGC
GAAAACATCGTGACCTTTATCGACCGCGCCTTTGCTGAAAAGACCGTTTC
CCACGATTTTGCTCTTCTTACACACGACCTTCTCGTGCGCCCATGTGTAG
TGCCCGCGTGTATCAGCCGCCTGTTGGTAAATAATGCAGTGGGTTGTCTT
TCAAAAATAATGAGCGACAACCATTATTTTCCTTTTTTCTGAAGCAAACT
GAAAAACCCAATTATCACCGTAATGGGGGGGACCTTCTCCACATCAGGGG
ATTGTGAGCACTTCCGCCGAGGGCGCTGGTGTATGTCGCCAAGCTGATCA
ACGAGCTTTCTGCACGCCTCCTTGCGCTTCCTCTCCTTCACCAGCTTGCG
CTTCACCATCTCATTTTCCTCCAGTTGAGCAGCTAATCTGGTACGCAGCT
CTTGGGCGGATTGCCTCTGTCGTTCGCTCTCTTCTTCAGCATGTTGCCCC
TCGAGCGCCTCCTTTTGTTGTAGGCGTGTCGCCTTTTGCCGTTCCTTTTC
CTTTTCTGCCACGCTCTTCCGCTCTGTCTCCTGGTAAATACAAGAAGAGG
CATAATTAAATGCACAAAGTAACAATCGCTCGGGGGAGCGAGACAAAAGT
GCGCCCTGTTCCAATAGGCTCTTGGGCGAGGGTTGAACACTTTTGGATAG
AAGCTGTCATACGGTACGTGGCTGATGAATGAGAAAAACGAGTCATTTTT
CTCTTTCCAGGCATTGGTTTGTGTTTCTTGTTCTTGATGCTCTGCTTGGA
CATGGACAACAAACAGTGACAGAGAGTGACACACCGTTAACTCGCAGGTG
CGTATTTTCAACAACACTGCTGCTGCCGTTGTTTGCATTTTCTATGCCGA
ACACTAGTGATGAAACGGCAAGAAGCGAATGACGACAAATCACAACATTG
TAGCATGAAACTCACAAGTTGCTCTCTCAGCTTCGCTTATGTAGCTCTCT
CGCGCTCCTTCTCCTCGAGTCTTATTTTCTCTTTTTGCCTGGCCATATCC
TCACCTCTCTTCCTCTTGCCCTGTGTTAAAGTCGCAGCCAGCGCATGTTT
TTGGGCACTGCTGTAAGCACTCTGTTGCTCAGACTTATACGTAGCGCTGT
GCTTCACAAAATTCACTTGCGCCTCGTCCTGTTTAGACTTTGAGTAGTTT
CCACAGGCGTGCTCTCTACATAGACTTGCATTTCCGCATCCGCACCTTTT
CCTCGTTGTTGAAACCCTGAGCCCACCTCTGCGCCATAGACTTCTTCTCT
GCCCGCTCTGACACAGAGCGATGATCACCTCCCTGCTTATCCTGCTCTTC
GCTGCCTTTCCGCTTACCGGTGGCAGCACCGCCACCGCCGCAGTCGACGC
TTTCACCCCGACATCCGCCACCCCCTGCCCGCTCTGCTACCTGATCGAGA
GGGCTCCCGGCCTTCCTGGTCGACCGCCGGAGCTGCCTTTCCACCAAACT
CCTTCGCGAGCCGTCGCCGTTCTGTACTCGCTGTCCTTCAACCGGCTCTT
GGGCAATCACAACGTCGGCATCGGCCTCTCTCGCTACCTGCACCGCCACT
TCACCTTTCACCAAGGCCTCGCTCGGCTCCGTCTCTCGTCCAGCGTCCGG
GACAGGCGCCTGCGCGGAGCCGCAGCAACGTACTGTCCGCGCCGCCCCCA
CCAGACACAAGCAAATCGGTGGGAGCGACTTGGGCGGTCACCGTGTCGAT
CGCACCCAACAACGTTGCATCGGGGCCATCCCATGCCGTGTCCACCCCCC
TGTCGTCCTCGTCGCTCTCGCCATCGACGGCACCGTCAACACTGTCGGCA
GCAGCAACGTCGATGGAAATGGACGGCGTTACGTCCGATTCTGTGGCCGC
GAGCTCATGCGAAACGTCCGCCGCGCCGTGTTCAACTGCCGCAGACACGG
GAACCGAATATCCCGTCACTTCGGCCCCGCCATCCGAGCCCGCTTCCGCC
ACTGGAACGGTGCCAAGCCTCACAAATGCGGCGTCCTCCTATGCGCCGGT
AACAGGGGAAGCAGCGGTGTCAGATGTACTATGGACAGATCACACCTTAA
ACTCGGGTGGTACAAGCCTTTTTGGTTGCCACACTTTCTTCCGGTTGCGC
TTGCATTCATGTCTATAACCATTTTTTCAGCAATGCCTGTAGCACAATCA
TCCCCTCTTTTCTTACGTAAAGTCAAGTTTCAGACACAATGCGCTTTGGA
ATCGCCAACACATACCTCGTGTTCATCGCCTACTCCGCTCCTGCCCCCGC
TCGCTCCCGCTCCCACCACCACGCCCTTTCCCGCGTGCCACCGCTCCCAC
AGTCAGACAGGCGTTGGCGAGAAAATATAGATTGATCGCCTTCTTATCGA
CTCGTCCTCCCCCTTCCTGTGTTCCACCCCCACTACTGCCCCCGCTGCCG
CCATCTCCGCCGCCACCGCCTACGCTGGCGCCCCTGCTGCTAGCGCTCCC
AACACTTGCTGGCACCGCTGCCGATGCTGGTAATGTTCGCATCGACGCTA
CCACCTTCTGCACTACTTTTGCCGCTGCTGTTGGGTCCCTTTCTACCTCC
ATCTCCTGCGTTTGCACTACATCCTCCGATGCCGCTGCTGTTGGCTCCTC
TACTGCCAGCCCTTGTGTCGACAGTACTTCCTGCGCTGCTGTTGGCTTCC
CTGCTGTAGGCTCTTCTACCGCCGGGCGCCTCAGCTCCTCTATCGCCGTC
TGCAGTACGTTCTCTGCTGCTGTGCCCTCCTCTACTAACGGCTGCATTAC
CTCGCCCTCGTTGTGCAAAGACTCCGTTATGCTCCTGTTCGCACCAACAC
TCCCACCCCCGCTTGTCACCACTCCCGCCTTTGAACAGGCGGGTGTCGCC
AAGAGTTCAAGATTTGTCGCGTTGGCCTGCCACACCTCTTCCTCCATTCG
TCTGGTACGGTCGCCGCTGCTGCTACCGCTGCTACCGCCGGCACCCAACG
TTGTCGCAGCCGCATATGCTGCTTTTGCTACTTGCAACATTTCAACTGGT
GCCGCTCCAGCTGCTGTTGGCGCGCACACATGCGTCACAGATGGTGGTGC
CGGCTAAATCACCGGAGCAGCTCCTGGTGCCGATTCAGCCACCGGCACAG
TCGCTGATACACGAGGAATGGAGATAAGACGACCACAGCGGCCGTTCATC
CCATCTTCCGCATGTTTGCGACAATGTGTGTACTTCCTCTCGAATCCATA
GTTGGCGGTGACTGGACACCCTGAAGATATGCACATCCTTTTTGCTTGCA
AGTTGATCATTCCGTTCTTGGCGTGGCGAAGACATAACTCTTTTATTCTC
TCGGTAGACGGAAAGCCGTAAGAAGAACGTTTGCTGCAACCACTCTGTCC
GCACACCTTGGATTTGAGATCGACCATACCGTCTTCCCTGTGTTCCCCAC
ACACCACTGATATTGGTCTCCCGTCCGCCCCTGTTGGGGAATAAACGGGT
TGACGATGGGAAAATGCATGCGAAAACAAACAGTGTAAGACGAGTATGTG
CGTGTTTGTGTGATTGTCTGGCGCCTCCTTCTGCGTACGCGCATAGTCAT
GTAGGCTTCTGATCTCGAACCACCTTCTATCTCTACGCTACAGCACTGCT
GCGACGGCTGTGTGTATGCTGCGGTCTTCGTGTGTGCTGGCGCTCCCGCC
TCCCAGAACTGCTTCGGCGTACCTAGGCCCAACCCTCTGCGCCCAAACGA
TCCATTTGTTTTTTGCACACATGGTAAGGCCATCTCCCCATGGTGTGGTA
TGGAGGCGTGACGTTAGTTCTACCATGCCAACGTGTGTCATCTGCATGTA
GATTCATGTGTGCTGAGTTGAGAGATTCCGTGACTCATTATCTGGCTAGA
CGGATGCCGTCGAATGTGTTTGTGTACATATGCTCTGCACGCTGTTGCTG
CTGTTGCTGTGTGTGTTTGCCTCACGCTTCCTTCCGTCGCTCGTATGGTC
GTGTAGGCTCCTAACTGCGAACTTGCTCGATACTTCGGTACTGCTGTGCG
ACTGCTATGTGTATTCTGCGGTCTTCGTGTGTGCTATATGCTCTCTCATC
CTCAAAGCCTCTTCGGCGTATTCACCTCTCACCTCTGTGCCCGAATGATC
CGTTTGTTTTTTTGCACACACGGCAGGGCCATCCCCCCATGGTGTGGCGT
AATGTGGTGTGGAGGCGTAGCGTGGGGTTGGTCTTACAAGTACCAACAGC
TTCCCCAGCCCTTTGCCACTCCTCGCGAGCGCCTCCAGGGACTCCGTGTG
TCATTATGAGTGTAGATTCAATGTATGCTTGGTTGAGAGGTTCCGTGACT
CATTATCTGTGTAGACTGATGCCGCCGAAGGCTCATGTACCCATGTTCTG
CCTGGTGCTGCTGCTGCTACGGATCGCGCAGAGACCGCAGTGGGAGAAGT
TCTTTTAGAGTTTGACGAGGGCTCTCCAAGATTCGTGGGTAATGATGGCT
CCCGCGAGCGGTGAGAGGGATTCGTGTGATTGTGTCCTCGTCTCGGTACC
CGCTCCCCCATGGGTCTATTGCTACCTGAACACGATAATTGAAAACTCCC
ACGCGCCAAACACACGGTACCACGACGCCAATTTATACACGGGCTGCGTC
TACACCGGTCCCCGTGTCCTATGGTATCGTATGTTTGCCAAAAACATTTT
TCGACCTCCTCGGTGGGCTGCCTCCAACTAAAACTAACATGACGTTTTCT
AACACACCCCAATAACACGTGTTTGCCCTCCTCCCCGGGTGTGCGTCCAA
AGTGCGCGAGCAGAACTTGGGCCACAAAAATAGTTCTAGGAGTACTGTAG
GAGAGCCATGCGTTGTTTTCGTGAGAAAAGACTAAGCTTGTGCGCAAAAA
TCGAAAAAATGCCGATTTGGGGTGTTTGAGAAGCGTGTGTGTCTAGGGCG
AGTCGCGTAGGTATTTCGGCCTCTAGGGGCGCCGGGGTACACGTTTTTCG
GGATGTCTTTTTTACTGCCTTGCTTAGAACACCCATGAGCAACTTAAATC
AGCATGGGACTGGTATAGTCTTCCTGGCTTCGGAGAAAACTACACTTGCT
TACACCTAATTTTGCCAAAACAGGGGGTGATTTTTCGTCTCAACATGGAC
CATCTTTGACAAAACTCGCCTCTGCTGGAACCTGCCGTTCTCGACCAGTT
CTTCATTGTGCAAATAGCCCAAGAGTATCCTCGTGACCCTTTGCTTGGCA
TACTTGATAACAGCGCCTGAGGTTGAAGGTGCTTTGCATTGTAGAACAAT
ATACGCAACAATAATGACCTCAAAAAATATCGGATCCTCTCCCGATCCAC
CCTCGCTCTCCGTTGCGGGCCGTTTAGGACCCAATACTTGGTTTTGAAAA
GCACCCAGTGGCACAAAAGGACTCCAGGACACATGCGAAACCCAGTGCTA
AGCCTGAAGGTCGCGCGAAACGCCGTTTGTCTACGAGCTACACTCGCCCG
GAGCTGAAATATTATTACCTCCCCCCCTTTCGATTCACCAGGTGCGAACT
TCAAGAAAGCTCGGTCGGAGGATTCTCCCGGTGGCGCACCAGAGGAGCAA
ACGCGAAGTCACGGTGAGAGTCCGTTGGTGTCGGATCTGTACCGTATAGA
GGAGGCGTACGCGCGACGAGGAGAAAAGCACCACCTGACCGACGAACAAG
AGCCCATCCCCCCGCTCGACCCTCTACCCCTCCCCGTGATCCGCCCGTTG
TATGTGATGTGTGTGTACTGCGGAGTGGTGTAGGGCGGTGTGATTGTTGT
CGAAATTGTAGTGTGGGCAAACAAACGGCGGCAGCCAGTTTTCTGCGCAG
TTTTGGGGTATATGTACAGGCTCTGAGCAGATATCGCCTTGAAAACAAAA
ATCCAAACATCAACACCGCCGTAGTTTCTTAAACCGTTTTGGTTTTTCTC
GGTGTTGCTTTGCGGCCGATGGTAGAAGCTCCGCAGTAGAAGAACTTCAT
CAGCGGCGTGTGAGAGCAATTGGGCGCTGCGGGCACGGATGGAGACCGTG
TTGAGCCAGTTGTGCCTGTTCTGCGTTCTCTCGAAGCAACAAAATGATCA
TGTTGAACTGACCCGTTTGTCAAAACATCTGGGTTCTCGGATGCTTTTTT
CTTTTGATGGTTATTTCCAGTGTTGCACGTTGCTGGTGCTGGCGCTGATG
CTCTACCCTAAATGATAAAAGCCTTGTACTCGTCAAATCCCTCCCGCTCC
TCTGTTCACTTTCCGATGATAGTACCCCCTTGTGCGCCGCCACGCCTTCT
AACAGCTTCTGTGTACGGTATGTTTCCTGACACCCAAATGGTTACAACCA
AGGAAAAAGACAGCAGTTGCTTGATGCGCGGTAGATGCCATATTTCGTTG
AACCTTCAGGTGTTTCGGCCACCAATCCACAGTCACGCGAGGCGCGTTAT
ACCACCGGTGCACCAGCGCATGCAGGGCCAAGACGGAGGACGGTGGTGCC
AGCATCTAGCAGCGTAGCTTCTCCTCGAGCGGCGACCTCTTTCTGTACAC
GAGCACCTGGGCCTGACATGTTGACCAGACGGCAGCAGGGGTGCGAAAGC
TCAGCGGTAAGGGTGTACTTCATTTCTATTCTCTGGCTGGCCTTGCGACC
TTGTCTGTTCATCACATTTCGTGGCGTATTGCACTTGTGTTTCAGGAACG
TGAGAGCGGGCGATTCGCACCACACCACCCTGCCCTATTTTGTTCCCAGG
TACTATTCGGGAGCGCTATTAGCGAAAGCAGCTGGCACGAGCATTTTGGC
GGAGAGCTGTTGGGAGGATTGACAGAGAGTGGAAGGGCGTGGGAACGATT
GTGATGGGGGGAGGGGGGAGGGGTGCAGATAGCATGCGTCAGGCACGGCT
CAGTATGCTCAGAGTCCGGGGTGCTCACGTGCAGCTGGAGAAATTAAAAC
ATGTTTTTTTGTATGGCACGCGGTTGCTTGCTTTTCATCAGCTGGCGGTG
TGCGAAGTGGAACACGTTGACGGTGCCTTGCCTCAACACCAAGTCACCGG
TACATTCGAGGCAGATTCTCTGCATCTATTTTGCGCGGATGTGGTCGAAT
TTGAAACTTTTTGATCAATCGCATTTTTGCACCCCACTTTTGGTAGAGGT
GGCGCCGGTTGTCATCTGGCGCGGGAGGGTTGTGGGGGAGGCGCGGTAGG
GGCTTGGTTGTGTTGCCGCCAATCAAGCAACCTTGGCGCTTGGCCTGCCC
GAAAAAATAGAAGAGCGTGGTGGCGCAATCGTCGCCCCTACGCAAGCGCG
TGTGGTACAATAAACGATGCGCTCGATGTGCAAGAGCTGATGTGTGTCCA
TCCTCAATACCTCGCCAAAAAATCTGTTCACTTAATGCTTCTTACAACCG
GTGTTCGGACACCAAACACGGCACATTTTGAAGGAACACCTTGCCGCCGG
CTTGTTACCACATTGGCAAACCTTGCTGTTATTGTCTCTCGGCAACTGCT
CTTCCCTTATCCTCCGTCTTTCGCGCTCTTTTCCGCAGCGTCCATTTCAC
GTAGATGTGTTAACATGCGAACGGGCGCCGGCCGACAAGCGTGGGGCCAA
TGTGCGCCGGCGCGGGTAGAGTAAATTCTCTGTTTTTGAGACGGTATTAG
GGGAGAAGCACGTGTAGCACCACCGGTTCGTTGCCACCGTGGGCTCCTCT
GCTACCGGCTCCATCCCGCTCCCTGAAACAGTTTGGGGACAAGCGAGGGG
AGCCGTCGCAAATCATAACTGATCATTCTAATCCGGAAACGACGAACGAA
TTCCAGGCACGCCCACGCACATTCTGCCAGGTCTCAAAAATGAAAATGCT
CGCCGACGTAGACATCGATCTCGTGACTGCCTTCTTGCCCGATGTAAAGT
CCACGGCTGCATTTGCGGGAGCTTTCCGACGCTCAAAAGGCGTCGTCTAC
GCCAACATCCCGGCCGCTATCGAAAGCGTCAAGAAGAACATGACCAAATT
CCAGCGAGAAACCCTCTGCAAGCTCGCGCAGAACCCGGGTATCGGACACC
TGAAGGCCATTGTCGAGCGCAAGTGCATCGTATGAAGCAATAATAACAAG
AGAGGAATATCCCGGCGCACCCGGACTGCACCAAGGGCCTCAAAGTCAAC
TTGCGGTGCATCCGGAGCGGGATACCGGATGAGCTCATGCCTCTCGTGCG
GTCGACGATGCCGGTCAATGTCAGGGAGGGTTACACCCGTACCACGGTCA
AAACGCTTACGAGATAGAAATCCCCAAAGCTATCCCCGGTGTCATCCCGA
GAAACATGACACGCGCGCACTTTAGAACGGACCACGCCAACGAGGTCAAC
GCTTGGATGGAGAGAGTTCGCCAAGAGAAGCGCAAACGAGCGGCGGTGGA
ACAGAGAAACGCGCGACGGAAGTAACAGAGTGGCGTGAACGATTAAAGGA
GGGCGTCAATCTGAGGTGGATGCGCACGGTACCGAAGAGCGCGAAGAAGT
ACGTGTCGAAAGTGTCCGCGGAGGACAGCGTCGCCGTGGTGGCCGCCAAC
GCAGACTTGTCTGCGACAAACGAGATACTCCTAACGCTGGATGTAGACGG
CCGTGCACGCAAGAGTTGGAAGCCGCGTACGCGCTGACTCGGAAAGTCGG
AGAGGTAGCGGTGTCTATGCTTCGTCGCCACCACCGCGTTCGAGCCGTCC
GCGCGGAGCTTGTCGCGCGTGAAAAGGAAGAGCAGACGAGGGAGGCCAGG
GCGATGGCTCGTGAGGACAAGTACATACTGGAACAGCCCGGGGTGGTGTA
ATCAGACGACCGCGCGTGGTCGCGATGGTGACCAATGATGATAGGGTTAG
GGTATAAGCGCTTCGGGAGGTTGTAGCCCTGCCAGGGGAAGTAAGGATAT
TTTTTGGTCAACCAATCAACTTTTCTAGAGCGTTTCGTCAGTGTTTACGC
AAAAAATTCGGGTTACAAAGCTCGTGCCCCTTGCTCACAACTGATCAGCG
CCGTCTTCAAAAGCCAAACAAACTGCCTCGAAGAACACCAGAAACAACAG
TATGAACAACGCCATGGACAACAAGATCGACGTCGACCAAGAATCGAACA
AGGCCGCGACCGCGGAGGTTGATGACATGCCAACCGGGTTTAGGTTTCTG
TCTGATGAAGATCGCAAGCCCTTCGCCAAACAACTAGTCGAGCAGTCTCT
TAAACGTAAGCGCCAGGAAATCGAAGAAAAGGAGATCTCGCTTAAGCGCA
AGCGTTGCGAAAACGTCATAGACTGTTACAACTGGATATCCGATTTCGGC
TTTGAGGTCGAGTTCGATTCGCGCACAGTATTTCACATTTTGGATACTAT
GGCCGTCCTCACCCAAGTAGACGTTGGTGTCGAGGGCGAGGTGCTCTCAA
CTTGCTCGTCTTGTGAGAGCTTTTCGTAAAGTGGTTGTCTTTGTGGATAC
AGCGGTCAAGAATGCGCATTCAATTCCCTCCAAAACATATGTTTGAAAAG
TTCAAAGCTTGGTACCATGGACGTCACCCAAAGCATGTAGACAACAAATC
AAAACGGGAAGCGTTGTAGGCGGGATCTGCATGATGCTTGGTTGTAAATA
CGTCGTTCACCCACCAGAACTTCAATGTCTGCCGGACCTATATAACACCG
TGCATCAAACACGAGCTCTGTCACGGACGTCGCTAAAATGGTGCTTGGGT
GTGACGGAGAGGAGGCCGAGGGAGCTATTCGCAAGCTCCTCGGCGCGATC
CGCAACAGGGACCAAGACTTTCCCAGAGCTTACTGAGTAACCTTACGTCC
GACGGGAACATCGGGGATGACTATTACAAGGCCCCTGACTTTGCTTCTGC
TATGAACAGATTCAGGCGAAGGAAAATATTTGGTTGGTGACGAGTGGTTA
CAAAATTCGACAGGCCCACGACGAAGCATTTTGTAACCCCAGAGCGTCCC
AACTCCCACTTCCGGTCGAGATCGAGTACGGGAAAGCCAAGCGAGCCGCC
AAGGATGTAAGAGACACGTGCAACGGCATAAAGACCAAATATAGCGGCTG
GGGCAAGCACACCCGTGAGCGGATGGACGAGGCGCGGGCCACCCTCGAGG
CGGACACCGTGGACATCGAGTCGCGTCCCCCTCTGATGTGCGGTTGTAGG
GCGGTCAGAGCGCAACTTTTTGTTGCGGCGAATACAGAGAACTGAAAACA
CTAGGAGAAAAAAACGGGTGTTTGGAGTCACAGAGCCAAATGAATTATCT
GCAGAGCCTGGCATGGCGCTCTTCTTTAAGAGGCTCGAGTGTTGGCAGAG
CAGTACAGCACGATGTTCTAGGCACTTTGCGTCTGTGGGTGAAGTCGTGG
GCTAAATGCGTAGGTAAGACAAAAATGGAGACGCGGTGGATAGGTGCACG
AACGTGTTCAGCACAGCTTTTTTTGTTTGGTGCTTGATTCATTTGGGGTA
TTGATGGTTTTGTTTAATTTGTTCGCGATTGGAGGATTTTTGGTTGGGTT
TCATTGCGATTGGTGTTTATGTATATCTGGATATATCTGCAATTGTCGGA
TGGCAAACGAAATAATAACAATGTACCGCGCTTTTACAGGAAGAGTGTCT
GCCCTAGCTGACACTCTGGACATCCGCCATTCGAGGCACGTGAACGGCCC
CGTCTGCCTTCGAGCAGGACGGGATCAAGAAGACACCCGATCAAGTTTGC
GCTGTCGGGATGTGGCGGGTCATTTTACTAGGAATAGTATTTAATGTCAT
TCGCAAGAACGCACTTGCCCGCAAACAAAAAGAAGGAAGAGGGTGGCGAG
ACCAAGCGATGAACGGCTTGCCCCCGTTTTCTGCCCTCAAATCGCTGTGC
TTCCCACCAGCAAGACCCGAAGGATGTGTCACTCCGCTGGATGTTTGCTC
GAATGTACTCGGTGGCTTTTTCGTGTACGGATGCTATTGCCCGCTCACCA
GCACGACGTGCTGTTGTGACAAATCGACGCCTTCGGTTAAGATGCCACGA
TCAAAATGGTCGCACAGGAACCAGGAATCAACCCCGCCAAGGCCATCGAC
TACTGCTCGTCCGCCGCCATAGCAAAGGTTGTCTTCAAGATCTACCGAAA
CGTGACCTGCTTTTATTTCTACAACCAAGACACTTTTGTAGAAGGGGCCG
TTCCCCACGACTACAGGAAGGGTGCCGATCGTCAGGTTTGGGGCACATAC
AGGGGGTTGCGGGAGTCACGAGCACGCGCAGATGATGTTCTTTGAACGAA
CCGATGTTGGCGAATACTGTCAAGTCCATGCCCGATACAGTTGATCGCAA
TACCGTGTCACGAAAGGTGTAGGACATTATTGTGTCACTTTTTGGGATGA
AGAGGGGTGGAGAAGGACGTGAGCGGAGTGGGGTCGAATGGGGGCGGTGG
GGAAATGTTGATGGAAGGGGGGGGGCGTTGCGAAATCAAAGACGGTAAAC
AACTGTAGAAAAGCTTGCCGGAACAACGAATCGTGCAAGCACGAACCCCG
GTTTTTGTGCTCGTGGGAAAGCAGTTGCCCGAATTGCTTGTTTTTTTACT
ATTAATCTCACACAACATTCACAAGAGAAACCTCAGCCATCGCATATCCC
GCTGAGCACCCCGCCGCGTGCCAGGGGTAGTTCTTGCACGTATCGTTACA
GCTCCACCAAAAATCATGACCGCACATCTTGCAGCACGTGTGATCGCATC
CCCCAGTCTTAAATATTGGAATGCCGCACTCCGGGCACGCCTTCGTGTCC
TTGTCCAACAGCTCCTTACTGCTCGGATCTACATCTCCCGCCAAGAGGTG
GCTCACGTCCATTTGCGTCTTCTCTAACTGAGCAATCGTCTCCTCGCGAA
GGCACGCCGACACCTCCTGCCCCTTGAAAAACGCGCTGCAATCCGCATCA
ACGCAACACGGTACCGTATCGAGCCAAACCGTGCGCACGGGCACGAGAGT
TTTCTCCACGTAATTCGTCATGCACTGCTTGCACGCAACGTGACCCTGGC
CACATGTGCTGAACTCGACGCCGACACCTATCTCCTCGCAACACAAACAC
TCTCTTTTCGGCTCGTCGGCGCCCACATCTCCCGCAGTCAAATCGAAACA
TGTCAGGGCGGCGTCGTATAGGGCCTCGAACGGGCGCTTCCCGAGCATGG
TCCCAGAAATGTCGACGTAGTTGATGTGGTCGTCGCCGACCATCGAGCCG
TATCCGTCCCAGTATTCGGGCGAAGCCTGGCAGTGCGCACACTTCATCTT
GATTGGGGTGGGGAAGGCGGCCATGTTGTTGTGGCGGTGGTGAGAATGGT
TGTGACGGAGGTGGGGCTCGACGCCACAAATTCTGCAAGTCCCCAAACCC
GTTTTCCAGCGCCCAATCCAAAACACTGGTGTTGCCGGTTGAACTAGAAA
TCTCAACGACCTGTTGCTCATTCCACGGGCACCCGTTGGCAATCGTCGGT
TGGCGGCGGCACTCGTACACGTTTCCTCATCCTACTCGCATCCCTTCGAA
CGTGCCCACGCCAGAATGTCTATGTGTCCCCCGGTGGCCGCGACAATGCA
CATGTCTTCACTCAGAGGACACCCGTGGTCAAAAGCCCACTCCAACGTAT
CTAGATGCCCCGCTTCGGCAGCATTGTATGTGGTTCCTTCGTCCCACGCG
CACCCGTTTTCACGCGCCCAAGCCAACAGCTCTAGGTTTCCCCGCCTCGC
GGCTTGTGCCGTCGTTCCAAGGGCAACCGTGTACCCTGGCCCACTTAGCA
CTTCTAAATTATTGGACTCGGCAGCGTTGTAGCACGTGAGCTGGTCCCAC
GGGCAACCGTTAAGCCTCAGCCACTCCAATACGGCCATGTGCCCACCCGT
AGCTGCCATCGAAAACGTATACAAATCCCACGGACAGTCATTCTCACGCG
CCCACCCCAGAATGTTCAAATGACCCGCTAGGGCGGCCCTGTCGCACACC
GACGCGTCTAATTCTGGCCCTTCTAACCACAGGCATTTCAACAGTTCGAG
GTGGCCATTCTTGGCGGCGATGGCGTACAGAGAAGGTCCCAATATACAGG
TTTTCGTTTTCAACCACCTCATGACTTTCAAGTGGCCACCGGCCGCGGCG
GCATAGCCCGTGTACGTGTCAACGCCCTGACCTAGATTCACCTCTAGAAT
GTCCAACGATCCGACCAAGGCTGCGTTTTCACAAGCCTCGTTGCGAAAGA
CACAACCCGCTTCAACAGCCACTATATATAAACCGAGCCTACCATACAAC
GCGATTCTTGCAAACTTGGAGGTTGCTCCTGCACAGCCCGCTGCCCAAAC
ACTCGTGTAGCATGTCGGTACTGGTTTCGCGTACAGGGCATCTCGTGGTC
GTGGGAGAAGTGTGCCACGCTGTTTTCCAGCCCCGATCAACGCACGCGAA
AGATATTGTTGCGGCGAACGGATACGTCTGTACCCTTCCGTCAACTGTCA
ACTGCGACGCTCGCCACATCGTAGGGGTTTGCAGAGGTGGCAAAACGACG
CTCGAGAACATGCAGTTGCCCTGCGTGCAAGACCACAGGGCAAAATCTGC
ACGCGAAGCACAGGGTGCTTTACGAATGATGGATGTCGGGTTGGAGCCAG
GCGACACCTAACATCGCCTCCGGAACGATGTAGTTTCCGGTAGACAAAAG
GACACCGCTTGAGGCGATTCAGGACGGGTGCGGATTGTCGCTCCTCGCGT
TCAAGAGAGTGGACAGAACGTTTGTAGAGGACGCCTATGCCGAGGTGGAT
TTTGGAGGAAATGTTGGAAAG

Coding sequence (CDS) from alignment at C-linearis_contig87:456638..472008+

>mRNA_C-linearis_contig87.16294.1 ID=mRNA_C-linearis_contig87.16294.1|Name=mRNA_C-linearis_contig87.16294.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=546bp|location=Sequence derived from alignment at C-linearis_contig87:456638..472008+ (Chordaria linearis ClinC8C monoicous)
ATGCCACCGCAACAAATTTGCGCGCGGGGCAAACGGGGCAAGCGGGGCAA
GCGGGGCACCTCGGACAGTCGAGCTTCGTTGGAACCGGGTGACACGCACG
TGTACATCGTCACGCCTGAAAAAATAGCCTTTCCCATGCCACCGCAACAA
ATTTGCGCGCGGGGCAAACGGGGCAAGCGGGGCAAGCGGGGCACCTCGGA
CAGTCGAGCTTCGTTGGAACCGGGTGACACGCACGTGTACATCGTCACGC
CTGAAAAAATAGCCTTTCCCTTTCCGGTAGACAAAAGGACACCGCTTGAG
GCGATTCAGGACGGGTGCGGATTGTCGCTCCTCGCGTTCAAGAGAGTGGA
CAGAACGTTTGTAGAGGACGCCTATGCCGAGGTGGATTTTGGAGGAAATG
TTGGAAAGTTTCCGGTAGACAAAAGGACACCGCTTGAGGCGATTCAGGAC
GGGTGCGGATTGTCGCTCCTCGCGTTCAAGAGAGTGGACAGAACGTTTGT
AGAGGACGCCTATGCCGAGGTGGATTTTGGAGGAAATGTTGGAAAG