mRNA_C-linearis_contig87.16288.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE) HSP 1 Score: 1966 bits (5092), Expect = 0.000e+0 Identity = 1170/1713 (68.30%), Postives = 1297/1713 (75.72%), Query Frame = 1
Query: 238 PVGNDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVTSMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGI--RGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLKGLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRPESAFQGPFHAGETAESVFLITGSPKIINGIEMYNAFADEVGKYEAVGTTEPPIMDGAFRGMVDPDGTVKRVKGNVKIDEATASASAPAASAAIKQETGRRGSAVARAEGAGGGKGEVDGGSHGAKRLRLDEEGGANGDGDGVKKEIREAGGGAKNADL--GEATD--------------DEEAQVEKVRLGEAYPIVGLNDIVIFLKHFNPKGLPLPHLTYVGHTLLTGATSSDQLAAEAVRLSGLPAGTPVDLYEQVTPRVVNKVPQDKTLDENELQHGDIILFQIRPPKKA------------------KPKXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXGQQQAGAGSLAPPAAGATAGAKEEVAGEN--GGARVWTGSAGIERVLFGGIWRVPGQTATPKTFLEQRSSQRVVHFRGRTERDGVLLPEGSATKDGRRPGVTVELPRLASHREILETLSRRLELVNNPLQIRISAQTAGGKPQSFPTRVHMSDLDLVQFSLHRILDVNQGAQHNHTILFEVLPFPLDQLTPATTVVEAYASDAVLKAHCLSRMEEEPHMKIARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEGKGTVGDGVGTDRDGKSPGQEGGTNARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDGSGNGGDKSKRKCGGDXXXXXXXXESNEDIVLKPPGPEDLIATYVLARGSDSILETLKQLSDKLGLPRGGEHRLRLLGLGAGEINAVIDKADDAQRFFISRMMSATHVCGPVIKTPPHGSILLEMADDEEMKATSGWGKLPPPEGEPAPPPWMPIQVTFFNINGGSQWAQLHGNPLVTYACATDEIEDIIQRYGRRRGPEAVESSGLRRCRSAVIEQFKPIYIDEERENEXXXXXXXXXXKRRGA-------------QPHEPLPGLPLAPSPSLSSLPSAPPXXXXXXXXXXXXXXXXXGVAAKTMSLGXXXXXXXXXXXXXXXXGSLANGDHAGGGGDGADEFDENDGGSMLWRLLSDRFPECVNKGLED-HGQVPNGKFPTIAFKKENPNESRSSYQRAEQGIRIRGS 5220
P G R+ VTD KGWEWRLMIMP GNS +SYG+LSVFVEHVNKDHLK+ EPGFSRE+RLGF LLP DQSR+ +SDSLC+ PLRH+F+Y+NADFGYPRCW RA VLD G+D Y+ NGH+RISTFIE+V D+KVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEE+SVTSMALALQRVFYRLQTS+KSVGTKELTKSFGWD YDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEG+IRSYIQCVDVDFTSAR ETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGE+HGRQVAKKGVRFL+FPPVLNVHLKRFEY+M+TGTMVKVNDR+SFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRV GGQWCKFND+VVTQVDESEAIEGSYGGGPDVLEE+ RD TFFPRDV+ G+ RGWAVGGDNTSAYMLVYVRECDLPKTMLDLTN EDNG+P+RLRERF KEEE+ RR EKNEAHLYFT+RVARD DL+GLRILM+EEF++WD+A+TV+V+KKAPAE+LS++V +ALGIRTDRCRLWVCCSRENKT RPESAFQGPF A ET ESVF TG P+ I G+E+Y+ FADEVGKY AVG T+ P+MDG +RG V DG +K + + A A + +E RG+ A + +G + SH AKRLRL+ G NG ++E GGG + A+ G D DE+ QV+KVRLG+AYP++ +ND++IFLK F+P GLPLPHLTYVGHTLL G SS+ +A EA+RLSGLP TP+DLYEQVTPRVVNKVPQDKTL ENELQHGDIILFQIRP K+ XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX AG ++ AGE+ GARVWTG AGI+RVLFGGIWRVPG T TPKTFLEQRS+QRVVHF GRTERDGVLLPEGS T+DGR PGV+VELPR ASHREILETLSRRLELV++PL +RISA T GGKPQSFPTRVHMSDLDL QF+LH+ILDVNQGA H+HTILFE+LPFP++QLT ATT+VEAY+SDAVLK HCL+RMEEEP MK+ARR XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S GD G D ED+VL PPGPEDL+ATYVLARGS +ILETLKQLSDKLGLP G EHRLRLLG+G GEINA+I+K DDA+RFF++R S +VCGPVIK P GS+LLEMAD+EE+KAT WGK+PPPEGEPAPPPWMPIQV F+IN QWA LHGNPLVT+ACATDEIEDIIQRYGRRRG EA+ES+GLRR RSAVI+QFKP YIDEERE XXXXXXXXXX Q PLP P PS + PSA P G A + E G S+LWR+LSD+FP +N+GLED QVPNGKFPTI FKKENPNESRS+Y+RAEQGIRIRGS
Sbjct: 268 PNGAVRRWYGGVTDRKGWEWRLMIMPNGNSSESYGNLSVFVEHVNKDHLKDQEPGFSREVRLGFALLPQDQSRVCSSDSLCKPPLRHAFDYKNADFGYPRCWARAVVLDRGGRDVYIRNGHIRISTFIEDVADSKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEENSVTSMALALQRVFYRLQTSNKSVGTKELTKSFGWDAYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGTIRSYIQCVDVDFTSARVETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEQHGRQVAKKGVRFLRFPPVLNVHLKRFEYDMTTGTMVKVNDRFSFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVKGGQWCKFNDEVVTQVDESEAIEGSYGGGPDVLEERFRDTHTFFPRDVESDGGGVVGRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNSEDNGIPQRLRERFVKEEEDQLRRFIEKNEAHLYFTIRVARDPDLQGLRILMSEEFIKWDNALTVKVRKKAPAEELSRVVAKALGIRTDRCRLWVCCSRENKTFRPESAFQGPFLAHETVESVFSNTGPPRTIGGVEIYSVFADEVGKYAAVGVTDNPLMDGTYRGTVGTDGAIKVLDSKEQCS----------AGAGVNKEGKGRGAGRAAGD-----RGVRE--SHDAKRLRLESAGRDNG-----ASGVKEGGGGGEEAEDEGGVGVDGLTAEERRKKLEKEDEDLQVDKVRLGQAYPLIDVNDVLIFLKLFDPNGLPLPHLTYVGHTLLAGDASSEIIAEEAIRLSGLPPSTPIDLYEQVTPRVVNKVPQDKTLSENELQHGDIILFQIRPDKQPGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPQKGAAGEDVKSGARVWTGKAGIDRVLFGGIWRVPGHTDTPKTFLEQRSAQRVVHFMGRTERDGVLLPEGSMTEDGRMPGVSVELPRTASHREILETLSRRLELVDDPLLLRISAMTTGGKPQSFPTRVHMSDLDLPQFALHKILDVNQGAHHHHTILFELLPFPMNQLTAATTLVEAYSSDAVLKTHCLARMEEEPFMKLARRRKTARLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNGHGLLETNAAAGVLSTSSLSAGAGDXXXDGLGMDVATC-------EDVVLTPPGPEDLLATYVLARGSQTILETLKQLSDKLGLPPGSEHRLRLLGMGTGEINAIIEKGDDARRFFVAR--SNHYVCGPVIKEPNVGSVLLEMADEEEVKATCDWGKIPPPEGEPAPPPWMPIQVVLFSINVQGQWASLHGNPLVTFACATDEIEDIIQRYGRRRGLEALESAGLRRGRSAVIDQFKPTYIDEEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQQVHPLPSAP----PSSPTDPSATP-----------------GKAGE-----------------------------------------EGYGCSLLWRILSDKFPHYINQGLEDTQVQVPNGKFPTIGFKKENPNESRSNYRRAEQGIRIRGS 1862
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: D8LL31_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL31_ECTSI) HSP 1 Score: 1591 bits (4120), Expect = 0.000e+0 Identity = 868/1251 (69.38%), Postives = 955/1251 (76.34%), Query Frame = 1
Query: 67 EGIVE-NGSVWRWYDDNNARQHGVDRLPTPPAAQDLVHVGENRVVFLADFAITHSRG-LPVGNDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVTSMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGI--RGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLKGLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRPESAFQGPFHAGETAESVFLITGSPKIINGIEMYNAFADEVGKYEAVGTTEPPIMDGAFRGMVDPDGTVKRVKGNVKIDEATASASAPAASAAIKQETGRRGSAVARAEGAGGGKGEVDGG---SHGAKRLRLDEEGGANGDGDGVKKEIR--------EAGGGAKNADLGEAT-----DDEEAQVEKVRLGEAYPIVGLNDIVIFLKHFNPKGLPLPHLTYVGHTLLTGATSSDQLAAEAVRLSGLPAGTPVDLYEQVTPRVVNKVPQDKTLDENELQHGDIILFQIRPPKKAKPKXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXGQQQAGAG---------------------------------SLAPPAAGATA---------GAKEEVAGEN--GGARVWTGSAGIERVLFGGIWRVPGQTATPKTFLEQRSSQRVVHFRGRTERDGVLLPEGSATKDGRRPGVTVELPRLASHREILETLSRRLELVNNPLQIRISAQTAGGKPQSFPTRVHMSDLDLVQFSLHRILDVNQGAQHNHTILFEVLPFPLDQLTPATTVVEAYASDAVLKAHCL 3627
EGIVE NG+V RWY A G PPAA+ L HVG+NRVVF+ DFA+ RG + NDRQHSHTVTD KGWEWRLMIMP GNS +SYG+LSVFVEHVNKDHLK+ +NADFGYPRCW RA VLD +D Y+ NGH+RISTFIE+V D+KVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEE+SVTSMALALQRVFYRLQTSSKSVGTKELTKSFGWD YDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEG+IRSYIQCVDVDFTSAR ETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGE+HGRQVAKKGVRFL+FPPVLNVHLKRFEYEM+TGTMVKVNDR+SFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRV GGQWCKFND+VVTQVDESEAIEGSYGGGPDVLEE+ RD TFFPRDVD G+ RGWAVGGDNTSAYMLVYVRECDLPKTMLDLT+ EDNG+P+RLRERF KEEE+ RR EKNEAHLYFTLRVARD DLKGLRILM+EEF++WD+ +TV+V+KKAPAE+LS++V +ALGIRTDRCRLWVCCSRENKT RPESAFQGPF A ET ESVF ITG P+ I G+E+Y+ FADEVGKY AVG T+ P+MDG +RG V DG +K + KQ+ G +G G G+ D G SH AKRLRL+ G NG GVKKE + G G E +DEE QV+KVRLG+AYP++ +ND++IFLK F+P GLPLPHLTYVGHTLL G SS+ +A EA+RLSGLP TP+DLYEQVTPRVVNKVPQDKTL ENELQHGDIILFQIRP K KP+ XXXXXXXXXXXXXX XXXXXXXXX S+A P G ++ GE+ GARVWTG AGI+RVLFGG WRVPG T TPKTFLEQRS+QRVVHF GRT+RDGVLLPEGS T+DGR PGV+VELPR ASHREILETLSRRLELV++PL +RISA T GGKPQSFPTRVHMSDLDL QF+LH+ILDVNQGA H+HTILFE+LPFP++QLT ATT+VEAY+SDAVLK HCL
Sbjct: 211 EGIVEPNGAVRRWYGGPTAGVSG------PPAAETLDHVGDNRVVFVGDFAVLDGRGGALMCNDRQHSHTVTDRKGWEWRLMIMPNGNSSESYGNLSVFVEHVNKDHLKD----------------------------------------QNADFGYPRCWARAVVLDRGARDVYIRNGHIRISTFIEDVADSKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEENSVTSMALALQRVFYRLQTSSKSVGTKELTKSFGWDAYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGTIRSYIQCVDVDFTSARVETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEQHGRQVAKKGVRFLRFPPVLNVHLKRFEYEMTTGTMVKVNDRFSFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVKGGQWCKFNDEVVTQVDESEAIEGSYGGGPDVLEERFRDTHTFFPRDVDSDGGGVVGRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTSSEDNGIPQRLRERFVKEEEDQLRRFIEKNEAHLYFTLRVARDPDLKGLRILMSEEFIKWDNTMTVKVRKKAPAEELSRVVAKALGIRTDRCRLWVCCSRENKTFRPESAFQGPFLAHETVESVFSITGPPRTIGGVEIYSVFADEVGKYAAVGVTDNPLMDGIYRGTVGTDGAIKVIDS--------------------KQQCSGGGGVNKEGKGGGAGREAGDRGVGESHDAKRLRLESAGRNNG-ASGVKKEXXXXXXXXXDDGGVGVDGLTAEERRKKLEKEDEELQVDKVRLGQAYPLIDVNDVLIFLKLFDPNGLPLPHLTYVGHTLLAGDASSEIIAEEAIRLSGLPPSTPIDLYEQVTPRVVNKVPQDKTLSENELQHGDIILFQIRPDKVVKPEGEDKMDVEGQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVASPEGXXXXXXXXXXXXXGPQKGAEGEDVKSGARVWTGKAGIDRVLFGGTWRVPGHTETPKTFLEQRSAQRVVHFMGRTDRDGVLLPEGSMTQDGRMPGVSVELPRTASHREILETLSRRLELVDDPLLLRISAMTTGGKPQSFPTRVHMSDLDLPQFALHKILDVNQGAHHHHTILFELLPFPMNQLTAATTLVEAYSSDAVLKTHCL 1394
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: V4LLB0_EUTSA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4LLB0_EUTSA) HSP 1 Score: 475 bits (1223), Expect = 1.930e-142 Identity = 287/615 (46.67%), Postives = 380/615 (61.79%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIE-EVQDAKVP--LSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVT-SMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRP 2058
N R+H V G++WR++I P+GN+ D HLS++++ + L G+SR + ++ +R T R+ +H FN R +D+G+ + + D YL N V F+E EV KV S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E + T S+ LALQ +FY+LQ + SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQRLFEG +YI+C++VD+ S R+E++YD+QLDVKGCKD++ SF KYVE E L+GDNKY A E G Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP ++D+D+ YL +A+R + N Y LHSVLVHSG VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG EE+L F + K T ++AYMLVY+RE D K + N ++ + LR R +KE+EE + + K +AHL+ ++VARD+DLK G I + V D + R++K+ P + + V + G+ R W+ R+N T RP
Sbjct: 68 NTRKHYSDVFVVGGYKWRILIFPKGNNVD---HLSMYLDVSDAASLPY---GWSRYAQFSLAVVNQIHTRYTI-----RKETQHQFNARESDWGFTSFMPLSELYDPSRG--YLVNDTV----FVEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQRLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHA-EGQGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVR--NLYTLHSVLVHSGGVHGGHYYAFIRP---TLSDQWYKFDDERVTKEDLKRALEEQYGG-----EEELPQTNPGF-NNPPFKFTKY---------SNAYMLVYIRESDKDKI---ICNVDEKDIAEHLRVRLKKEQEEKEDKRRYKAQAHLFTIIKVARDQDLKEQIGKDIYF--DLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRP 639
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: UBP12_ARATH (Ubiquitin C-terminal hydrolase 12 n=73 Tax=Brassicales TaxID=3699 RepID=UBP12_ARATH) HSP 1 Score: 485 bits (1248), Expect = 2.890e-142 Identity = 285/612 (46.57%), Postives = 377/612 (61.60%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVT-SMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRP 2058
N R+H V G++WR++I P+GN+ D HLS++++ + L G+SR + ++ +R T R+ +H FN R +D+G+ + + D YL N V + + V+ S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E + T S+ LALQ +FY+LQ + SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQ+LFEG +YI+C++VDF S R+E++YD+QLDVKGCKD++ SF KYVE E L+GDNKY A E HG Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP E+D+D+ YL +A+R + N Y LHSVLVHSG VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG EE+L F + K T ++AYMLVY+RE D K + N ++ + LR R +KE+EE + + K +AHLY ++VARD DLK G I + V D + R++K+ P + + V + G+ R W+ R+N T RP
Sbjct: 68 NTRKHYSDVFVVGGYKWRILIFPKGNNVD---HLSMYLDVSDAASLPY---GWSRYAQFSLAVVNQIHTRYTV-----RKETQHQFNARESDWGFTSFMPLSELYDPSRG--YLVNDTVLVEAEV-AVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHA-EGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSVR--NLYTLHSVLVHSGGVHGGHYYAFIRP---TLSDQWYKFDDERVTKEDLKRALEEQYGG-----EEELPQTNPGFNNNPPFKFTKY---------SNAYMLVYIRESDKDKI---ICNVDEKDIAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYF--DLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRP 640
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A2P2MFT2_RHIMU (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MFT2_RHIMU) HSP 1 Score: 471 bits (1212), Expect = 4.020e-142 Identity = 289/635 (45.51%), Postives = 383/635 (60.31%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRIST--FIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVT-SMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRPESAFQGPFHAGETAESVFLIT 2121
N ++H + G++WR++I P+GN+ D HLS++++ + L G+SR + F L ++Q S R+ +H FN R +D+G+ + + D YL N V + + +V D S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E T S+ LALQ +FY+LQ + SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEG IQ+LFEG +YI+C++VD+ S R+E++YD+QLDVKGC+D++ SF KYVE E L+GDNKY A E HG Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP ++D+D+ YL EA+R + N Y LHSVLVHSG VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG EE+L F + K T ++AYMLVY+RE D K + N ++ + LR R +KE+EE + + K +AHLY ++VARD DLK G I + V D + R++K+ P + V + I R WV R+N T RP P E A+SV ++
Sbjct: 65 NTKRHYSDIFVVGGYKWRILIFPKGNNVD---HLSMYLDVADSATLPY---GWSRYAQ--FSLAVINQVHQKYS---IRKETQHQFNARESDWGFTSFMPLSDLYDPTRG--YLVNDTVVVEAEVIVRKVLDY---WSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGMIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVEPLEGDNKYHA-ENHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRDNGKYLSPEADRSVR--NLYTLHSVLVHSGGVHGGHYYAFIRP---TLSDQWYKFDDERVTKEDMKRALEEQYGG-----EEELPQTNPGF-NNTPFKFTKY---------SNAYMLVYIRESDKDKI---ICNVDEKDIAEHLRMRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGRDIYF--DLVDHDKVSSFRIQKQTPFNVFKEDVAKEFNIPVQFQRFWVWAKRQNHTYRPNR----PLTPQEEAQSVNTVS 653
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A7J9IQJ5_9ROSI (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Gossypium armourianum TaxID=34283 RepID=A0A7J9IQJ5_9ROSI) HSP 1 Score: 471 bits (1213), Expect = 2.690e-141 Identity = 281/612 (45.92%), Postives = 376/612 (61.44%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPT-EEESSVTSMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRP 2058
N ++H + G++WR++I P+GN+ D HLS++++ + L G+SR + F L V+Q S R+ +H FN R +D+G+ + + D Y+ N V + + V+ S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E + + S+ LALQ +FY+LQ + SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQ+LFEG +YI+C++VD+ S R+E++YD+QLDVKGC+D++ SF KYVE E L+GDNKY A EEHG Q AKKGV F++FPPVL + LKRFEY+ TMVK+NDRY FP ++D+D+ YL +A D N Y LHSVLVHSG VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG EE+L F + K T ++AYMLVY+RE D K + N ++ + L+ R +KE+EE + K +AHLY ++VARD DL G I + V D + R++K+ P D + + + GI R W+ R+N T RP
Sbjct: 50 NTKKHYSDIFVVGGYKWRILIFPKGNNVD---HLSMYLDVADSSALPY---GWSRYAQ--FSLAVVNQVHHKYS---IRKDTQHQFNARESDWGFTPFMPLSDLYDPS--KGYIVNDTVVVEAEV-VVRKILDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPIGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHA-EEHGLQDAKKGVLFIEFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDRKYLSPDA--DTSVRNLYTLHSVLVHSGGVHGGHYYAFIRP---TLSDQWYKFDDERVTKEDMKRALEEQYGG-----EEELPQTNPGF-NNTPFKFTKY---------SNAYMLVYIRESDKDKI---ICNVDEKDIAEHLKIRLKKEQEEEDDKRRYKAQAHLYTIIKVARDEDLLEQIGKDIYF--DLVDHDKVRSFRIQKQTPFNDFKEELAKEFGIPVQYQRYWIWAKRQNHTFRP 621
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A0D2SFW3_GOSRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2SFW3_GOSRA) HSP 1 Score: 471 bits (1211), Expect = 6.690e-141 Identity = 291/637 (45.68%), Postives = 383/637 (60.13%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPT-EEESSVTSMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNT--------SAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRPESAFQGPFHAGETAESV 2109
N ++H + G++WR++I P+GN+ D HLS++++ + L G+SR + F L V+Q S R+ +H FN R +D+G+ + + D YL N V + + V+ S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E + V S+ LALQ +FY+LQ + SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQ+LFEG +YI+C++VD+ S R E++YD+QLDVKGC+D++ SF KYVE E L+GDNKY A EEHG Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP ++D+D+ YL +A+R + N Y+LHSVLVHSG VHGGHY+A+IRP QW +F+D+ VT+ D +E YGG EE+L PQT G DNT +AYMLVY+RE D K + N ++ + LR R +KE+EE + R K +AHLY ++VARD DL G I + V D + R++K+ + V + GI R W+ R+N T RP P E A+SV
Sbjct: 59 NTKKHYSDIFVVGGYKWRILIFPKGNNVD---HLSMYLDVADSSALPY---GWSRYAQ--FSLAVVNQIHHKYS---IRKDTQHQFNARESDWGFTSFMPLSDLYDPSRG--YLVNDTVVVEAEV-AVRKILDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPVGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRRESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHA-EEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGKYLSPDADRSVR--NLYMLHSVLVHSGGVHGGHYYAFIRP---TLSDQWYRFDDERVTKEDMKRVLEEQYGG-----EEEL--PQTN----------------PGFDNTPFKFTKYSNAYMLVYIRESDKDKI---ICNVDEKDIAEHLRMRLKKEQEEKEDRRRYKAQAHLYTIIKVARDEDLLEQIGKDIYF--DLVDHDKVRSFRIQKQTSFLAFKEEVAKEFGIPLQYQRFWIWAKRQNHTYRPNR----PLTPQEEAQSV 643
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A1Q3C9U2_CEPFO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C9U2_CEPFO) HSP 1 Score: 469 bits (1207), Expect = 1.100e-140 Identity = 280/612 (45.75%), Postives = 373/612 (60.95%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRIST--FIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVT-SMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLKG-LRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRP 2058
N ++H + G++WR++ P+GN+ D HLS++++ + L G+SR + ++ S+ + R+ +H FN R +D+G+ + V D YL N V I + V D S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E + S+ LALQ +FY+LQ S SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQ+LFEG +YI+C++VD+ S R+E++YD+QLDVKGC+D++ SF KYVE E L+GDNKY A E++G Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP E+D+D+ YL +A+R + N Y LHSVLVH G VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG EE+L+ F + K T ++AYMLVY+RE D K + N ++ + LRER +KE+E EK EAHLY ++VARD DL G + + + V + RV+K+ P + V + G+ R W+ R+N T RP
Sbjct: 69 NTKKHYSEIFVVGGFKWRVLTFPKGNNVD---HLSMYLDVADSTSLPY---GWSRYAQFSLAVVNQIHSKYSI-----RKDTQHQFNARESDWGFTSFMPLSDVYDPSRG--YLVNDTVIIEAEVIVRRVVDY---WSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECMNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVENLEGDNKYQA-EQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRVDGKYLSPDADRSVR--NLYTLHSVLVHRGGVHGGHYYAFIRP---TLSDQWYKFDDERVTKEDIKRALEEQYGG-----EEELQPTNPGF-NNTPFKFTKY---------SNAYMLVYIRESDKDKI---ICNVDEKDIAEHLRERLKKEQEXXXXXXXEKAEAHLYTVIKVARDEDLVGQIGRDIYFDLVDHEKVKNFRVQKQMPFNIFKEDVAKEFGMPVQCLRFWLWAKRQNHTYRP 640
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A830D192_9LAMI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D192_9LAMI) HSP 1 Score: 465 bits (1196), Expect = 1.390e-140 Identity = 272/603 (45.11%), Postives = 373/603 (61.86%), Query Frame = 1
Query: 286 GWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPL----SHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVT-SMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRP 2058
G++WR++I P+GN+ + +LS++++ + L G++R + ++ +++T ++ +H FN R +D+G+ + D G++ T + + A + +++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E + T S+ LALQ +FY+LQ SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQ+LFEG +YI+C++VDF S R+E++YD+QLDVKGCKD++ SF KYVE E L+GDNKY A EEHG Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP E+D+D+ YL +A+R + N Y+LHSVLVHSG VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG +VL PQT + +T + ++AYMLVY+R D K + D+ ++ + LR R +KE+EE + + K +AHLY ++VARD DL+ G + + V D R++K+ P + V + GI R W+ R+N T RP
Sbjct: 84 GYKWRVLIFPKGNNVE---YLSMYLDVADSATLPY---GWNRYAQFSLAVVNQMHNKLTM-----KKDTQHQFNQRESDWGFTSFMPLCDLYDPN-------KGYLMSDTCVIQADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPTGSIPLALQSLFYKLQYHDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHA-EEHGLQDAKKGVLFMDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDNGKYLSPDADRSIR--NLYMLHSVLVHSGGVHGGHYYAFIRP---TLSEQWYKFDDERVTKEDVKRALEEQYGGEEEVL------PQT----NPGYNNTPFKFTKY----SNAYMLVYIRVSDKDKIICDV---DEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLREQIGKDVYF--DLVDHDKVRNFRIQKQTPFNQFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRP 643
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Match: A0A2C9VD67_MANES (Ubiquitinyl hydrolase 1 n=5 Tax=fabids TaxID=91835 RepID=A0A2C9VD67_MANES) HSP 1 Score: 479 bits (1232), Expect = 3.960e-140 Identity = 291/629 (46.26%), Postives = 383/629 (60.89%), Query Frame = 1
Query: 247 NDRQHSHTVTDTKGWEWRLMIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSRITTSDSLCRQPLRHSFNYRNADFGYPRCWTRATVLDGEGKDKYLYNGHVRISTFIEEVQDAKVPLSHNSKKETGMVGLKNQGATCYMNSLLQTLYHVLSLRRAVYDMPTEEESSVT-SMALALQRVFYRLQTSSKSVGTKELTKSFGWDTYDSFTQQDVQELNRVLCDHLEDKMKGTPVEGTIQRLFEGSIRSYIQCVDVDFTSAREETYYDIQLDVKGCKDIHESFAKYVEEEVLDGDNKYDAGEEHGRQVAKKGVRFLKFPPVLNVHLKRFEYEMSTGTMVKVNDRYSFPREMDIDQ----YLGEEAERDPQRPNRYILHSVLVHSGDVHGGHYFAYIRPDGRVNGGQWCKFNDDVVTQVDESEAIEGSYGGGPDVLEEKLRDPQTFFPRDVDEKSTGIRGWAVGGDNTSAYMLVYVRECDLPKTMLDLTNQEDNGLPRRLRERFEKEEEEHQRRITEKNEAHLYFTLRVARDRDLK---GLRILMAEEFVRWDDAITVRVKKKAPAEDLSKLVGRALGIRTDRCRLWVCCSRENKTVRPESAFQGPFHAGETAESV 2109
N ++H V G++WR++I P+GN+ D HLS++++ + L G+SR + F L V+Q S ++ +H FN R +D+G+ + + D YL N V + + V+ S++SKKETG VGLKNQGATCYMNSLLQTLYH+ R+AVY MPT E T S+ LALQ +FY+LQ + SV TKELTKSFGWDTYDSF Q DVQELNRVLC+ LEDKMKGT VEGTIQ+LFEG +YI+C++VD+ S R+E++YD+QLDVKGC+D++ SF KYVE E L+GDNKY A EEHG Q AKKGV F+ FPPVL + LKRFEY+ TMVK+NDRY FP ++D+D+ YL EA+R + N Y LHSVLVHSG VHGGHY+A+IRP QW KF+D+ VT+ D A+E YGG EE+L F + K T ++AYMLVY+RECD K + N ++ + LR R +KE+EE + + K +AHLY ++VARD DLK G I + V D R++K+ P + V + G+ R W+ R+N T RP P E A+SV
Sbjct: 65 NTKKHYSDVFIVGGYKWRILIFPKGNNVD---HLSMYLDVADSATLPY---GWSRYAQ--FSLAVVNQIHNKYS---IKKDTQHQFNGRESDWGFTSFMPLSDLYDPSRG--YLVNDIVVVEAEV-AVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHA-EEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVR--NLYTLHSVLVHSGGVHGGHYYAFIRP---TLSDQWFKFDDERVTKEDMKRALEEQYGG-----EEELPQTNPGF-NNAPFKFTKY---------SNAYMLVYIRECDKDKI---ICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGRDIYF--DLVDHDKVRNFRIQKQTPFSHFKEEVTKEFGVPVQFQRFWIWAKRQNHTYRPNR----PLTPQEEAQSV 649 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig87.16288.1 >prot_C-linearis_contig87.16288.1 ID=prot_C-linearis_contig87.16288.1|Name=mRNA_C-linearis_contig87.16288.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1640bp MIMPQGNSPDSYGHLSVFVEHVNKDHLKETEPGFSREMRLGFVLLPVDQSback to top mRNA from alignment at C-linearis_contig87:260031..286646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig87.16288.1 ID=mRNA_C-linearis_contig87.16288.1|Name=mRNA_C-linearis_contig87.16288.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=26616bp|location=Sequence derived from alignment at C-linearis_contig87:260031..286646- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig87:260031..286646- >mRNA_C-linearis_contig87.16288.1 ID=mRNA_C-linearis_contig87.16288.1|Name=mRNA_C-linearis_contig87.16288.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9840bp|location=Sequence derived from alignment at C-linearis_contig87:260031..286646- (Chordaria linearis ClinC8C monoicous)back to top |