mRNA_C-linearis_contig87.16286.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: D8LHL4_ECTSI (DUF3342 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL4_ECTSI) HSP 1 Score: 594 bits (1532), Expect = 2.520e-191 Identity = 413/678 (60.91%), Postives = 454/678 (66.96%), Query Frame = 1
Query: 4 RVGKLMSRGDGQGKPGAAAAGAAAAVADSLSIRGTGHTAGRCVSPVHGSSPG--YLAGGGGRNCSHTKGTTSTNAHGNSGTNNSSRSAHHRGAEGSRGSGGVEASTSRYRPRTNSNFGSVASNXXXXXXXXXXXXXXNKNGVGRASAAGGSLRPSTARQGQRQGRALSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGGDVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVG-----ADTDENDXXXXXXXXXXXXXXXXXKAWSAER-----------ERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDRSPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVCHSHPQQEEACFPREGG---------------GNRGGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDHYFRDEDEDPRVLRVLRLQRHSISYKDWRVAVREETTAAVKSVTAANGGDG 1938
RVGKL SRG+G A +ADSLSIRGTGH G SP+HGSSP Y G R +T ++++ SR +HRG+ GS R R + S+ + ++ XXXXXXXXXX G LRP TA QRQ + SPR XXXXXXXXXXX XXXXXXXXXXXXXXXXXXX GD+VKIHVCDE RGITRDFPCER LLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSS+G T+ + G A+ D+N XXXXXXXXX R D AG PPLEVPLAVSILISSDFLQMQRLV ECL FVGEHLTEIVKLPIDLSCL +KMVLQLAKI++L+QLAVAKDRKDKLLSRVHKKRIE+DFRDRSPHSDNAIHCCR+CAGLFSEKV DV +CRAAPPTV FRG+L+RRHE LSPWSLTRTVTSLHR+GMSWTAVYWFLWGLTQPLYCV CREVFLAGDIG C SHPQQ A FP + G RGG+G G DGYYPCC+ RF+L+P PLGCV+ DH RD DEDP VLRVL+LQR +ISY+DWR AV EET A VKS G DG
Sbjct: 77 RVGKLASRGEGXXXXXXXXA-----IADSLSIRGTGHATGSFRSPIHGSSPSPSYPMAVGSR-------STKSSSY--------SRPVYHRGSGGSGSXXXXXXXADRQRNNSASSADEIGAHKAKGXXXXXXXXXXXX----------GKLRPWTAGHRQRQQPSTSPRLTGSRXXXXXXXXXXXGGSEPGSDEVDGXXXXXXXXXXXXXXXXXXX--------------GDIVKIHVCDEGRGITRDFPCERRLLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSDGKTTSRSNRSRGSHDNDAEHDDNHGDTSKRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPDMAGPPPLEVPLAVSILISSDFLQMQRLVAECLGFVGEHLTEIVKLPIDLSCLNDKMVLQLAKIVTLDQLAVAKDRKDKLLSRVHKKRIEIDFRDRSPHSDNAIHCCRYCAGLFSEKVRDVMSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCREVFLAGDIGHCRSHPQQ--AFFPGDSGCGSSTTXXXXXXISGEERGGVGV--GAADGYYPCCQSPVNRFSLEPPPLGCVSLDHVVRDADEDPLVLRVLQLQRANISYQDWRDAVNEETRAVVKSAVGP-GSDG 705
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: A0A835YQX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX4_9STRA) HSP 1 Score: 315 bits (806), Expect = 5.650e-88 Identity = 197/470 (41.91%), Postives = 246/470 (52.34%), Query Frame = 1
Query: 694 DVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPP-LEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDRSPHSDNAIHCCRHCAGLFSEK-----------------------------VLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDI-----GVCHSH---PQQEEACF-------------------------PREGGGNR---GGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDHY-FRDEDEDPRVLRVLRLQRHSISYKDWRVAVREETTAA 1902
D V IHVCD+ R +TRDF C R LLL+EM+YFQ YL ++ P+DE+DILVHCDVRIFEWLF+YIH+ T R+ XX XXXX PP LEV VS+LISSDFL+M LV ECL FV + +E+V+LPIDL+CL + MV +A++M+L +LA A+DR+DKLLSRV KKR+E+++RDRS D A+ CCRHCA L++E+ TC APP V RG LVRRH PWSLT V +LH RGM+WT VYW LWG T+ L C C E F A + H P+ A F PR+ GG R G G +G + CC+ +A RF+LD A GC DH D E L +L LQR SI+ + WR A+ EE A
Sbjct: 106 DAVTIHVCDDGRSVTRDFQCNRALLLQEMQYFQGYLSASAGPFDEVDILVHCDVRIFEWLFRYIHAPRQTADATPRSXXXXXXXXXXXXTCSAAAPYQAGXXXXXXXXXXXXXXXXXXXPPQLEVANVVSVLISSDFLKMAALVAECLAFVARNFSEVVRLPIDLACLTDAMVGAVARLMTLRELAAARDRRDKLLSRVFKKRLEVEYRDRS--GDRAVRCCRHCAALYTERPHGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXALTCARAPPLVDARGRLVRRHAPARPWSLTALVAALHARGMTWTEVYWLLWGATRTLRCRRCGEAFTASERKSNAESRLRPHAFTPESSYAVFETAASCRLASPSIASLTRARALPIAPRQIGGCRHHPGRAAYAAGACEGRWSCCRAAAARFSLDTAAPGCAVTDHVPEEDAPESAEALALLPLQRRSITAEGWREAIAEEAVRA 573
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: A0A7S2SHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHR3_9STRA) HSP 1 Score: 251 bits (642), Expect = 3.380e-66 Identity = 143/373 (38.34%), Postives = 194/373 (52.01%), Query Frame = 1
Query: 694 DVVKIHVCDESRGITRDFPCERELLLREMKYFQSYL--VGAS-SPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRD-----RSPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVCHSHPQQEEACFPREGGGNRGGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDH 1788
D + IHVCDE++G+ RDF C+R LL EMKYF SYL VG S D+IDI VHCDV IFEWL +YI D P LE VSILISSDFL+M++LV CLR++ L EIVK+P+DLSC+ EK+V +L++++ L KD+KDKL+S+++K+R+E+DFR+ + + I CCR C LF +D+ C AP V FRG ++ RH L WSLT V+ LH+ GMSW +YW LWG++ YC E R F+A ++ HP++ A L +YPCC + A F + +GC +H
Sbjct: 165 DTIVIHVCDEAKGVNRDFQCKRAKLLSEMKYFSSYLQLVGDDPSKEDDIDISVHCDVHIFEWLMRYIE-------------------------------------------------DPLSPPKLEPATVVSILISSDFLEMEKLVTHCLRYMSRRLPEIVKMPLDLSCISEKLVQRLSELVDASLLVGLKDKKDKLMSKLYKRRLEIDFRNPPLDSKKRQGYSKICCCRWCGRLFHFGAMDILDCPRAPSAVDFRGAVISRHMPLEIWSLTECVSRLHKNGMSWEEIYWLLWGVSHIFYCSESRRNFMALELSHRRHHPEKPSAGLDVR----NPSL---------HYPCCSEPALLFNVADVCIGCCYMEH 475
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: A0A7S3ZMG3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMG3_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.770e-65 Identity = 150/405 (37.04%), Postives = 194/405 (47.90%), Query Frame = 1
Query: 694 DVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDRSPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSP-WSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVCHSHPQQEEACFPREGGGNRGGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDHYFR--DEDEDPRVLRVLRLQRHSISYKDWRVAVREETTA 1899
D++ IHVCDE+R ++RDF C+R +LLREM+YF+SYL G ++IDI VHCDV IFEWL Q+IHS N PPL+ VSILISS+FL+M LVE CL+F+ H+ EI+++PIDL+C+ + +V +LA + E L D KDKLL +++K+R+ELDFR S + I CRHC L+ +C APP + RG L RHE + WSLT V LH GM W VYW +W T C C E F A D+ C HP +E L G Y CC RFA GC A H D P+ L +L +DW V +E A
Sbjct: 119 DLIVIHVCDEARKVSRDFACDRVVLLREMRYFRSYL-GGGDACEDIDISVHCDVHIFEWLVQWIHSPNK-------------------------------------------------PPPLDASSVVSILISSEFLEMANLVEHCLKFMAAHVGEILEMPIDLACVSDALVQRLAALCPAEVLCDLTDAKDKLLPKLYKRRLELDFRHSSKANKRDILKCRHCDRLYPAWAQTKLSCAKAPPRIDRRGHLCLRHEPVEERWSLTEYVGELHAAGMPWEEVYWTMWAATHIFRCTACDEWFGAADMENCRHHPGPQEFTDDHA-------L-------RGKYACCGAECLRFAAGAVAKGCAARRHAVSSIDGSASPQTLALLEK-------RDWARTVEQEEPA 452
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: A0A6H5K1Y3_9PHAE (DUF3342 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Y3_9PHAE) HSP 1 Score: 237 bits (605), Expect = 6.430e-65 Identity = 150/224 (66.96%), Postives = 162/224 (72.32%), Query Frame = 1
Query: 802 VGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGT------------------PPLEV-----------PLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDRSPHSDNAIHCCRHCAGLFSEK 1386
+ ASSPYDEIDILVHCDVRIFEWLFQYIHSS+G T R+ +D+ +ND XXXXXXXXXXXXXX PPLEV PLAVSILISSDFLQMQRLV ECL FVGEHLTEIVKLPIDLSCL +KMVLQLAKIM+L+QLAVAKDRKDKLLSRVHKKRIE+DF DRSPHSD+A+HCCRHC GLFSEK
Sbjct: 206 IHASSPYDEIDILVHCDVRIFEWLFQYIHSSDG--KTAGRSNRSSDSHDNDAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPLEVGDVCSAALPSVPLAVSILISSDFLQMQRLVAECLGFVGEHLTEIVKLPIDLSCLSDKMVLQLAKIMTLDQLAVAKDRKDKLLSRVHKKRIEIDFCDRSPHSDSAVHCCRHCGGLFSEK 427
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: A0A7S1XVF4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVF4_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.080e-60 Identity = 124/312 (39.74%), Postives = 176/312 (56.41%), Query Frame = 1
Query: 691 GDVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDRSPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFL-AGDIGVCHS 1623
G+++ IHVCDE RG+ RDF C RELLL M+YF+S+ + +S D++DI VHCDV IFEWL +Y+HS N P L+ +SILISSDFLQM L E CL+++ HL+E++++PID+ C+ ++++++LA + E LA +D++DKLLS+++KKRIE+DFR+R ++I CR+C F+ K C AAP +V F G LV RH WSLT+ V LH +G+SW +YW+LWGLT C C F AG +C +
Sbjct: 310 GELIVIHVCDEDRGLKRDFHCRRELLLEHMRYFRSF-IDENSSQDDVDISVHCDVHIFEWLMEYVHSVNS-------------------------------------------------PPKLDPSCVISILISSDFLQMDPLTELCLKYITAHLSEVIRVPIDMGCIKDELLVRLAALTEPEVLAYTRDKRDKLLSKLYKKRIEMDFRERQKGVPHSISACRYCLQPFATKSEAQLRCPAAPISVDFAGGLVARHAPAGGWSLTKFVGGLHNKGISWERIYWYLWGLTHHFNCSACGLTFNGAGAANLCQA 571
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: F0YN17_AURAN (DUF3342 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN17_AURAN) HSP 1 Score: 223 bits (568), Expect = 1.860e-57 Identity = 155/459 (33.77%), Postives = 204/459 (44.44%), Query Frame = 1
Query: 694 DVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDR--------------------------------SPHS--------DNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHE-ALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVCHSHPQQEEAC--FPREGGGNRGGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDHYF--RDEDEDPRVLRVLRLQRHSISYKDWRVAVREETTAAVKSVTAANGGD 1935
+++ IHVCDE+R I RDF C+R +LL EMKYFQSYL G S +D+IDI VHCDV IFEWL Q+IHS PPL+ VSILISS+FL+M+RLVE CLR + PIDL+C+ EK+VL+LA++ + E LA D+KDKLL +++K+R+E+DFR R +P S I CRHCA L+ C AP V RG L RH L WSLT V +LH GM+W VYW +WG+T C C + F A D+G C H ++ F G Y CC RF+ GC +H R P LR+L+ Q I++ R +R + +A +G +
Sbjct: 18 ELIIIHVCDEARQINRDFACDRSVLLEEMKYFQSYLGGDSGSFDDIDISVHCDVHIFEWLVQWIHSP-------------------------------------------------LRPPPLDSSSVVSILISSEFLEMERLVEHCLRHM----------PIDLACVSEKLVLRLAELCTAEVLASLSDKKDKLLPKLYKRRLEIDFRHRHAEARKDRDAKEPDKKPGAKRDGDEKKDGDLRAPASGGPSEKPVSREILRCRHCAKLYPAWAQKWLPCADAPFLVDGRGALASRHAPVLERWSLTEHVGALHALGMTWEEVYWLMWGVTHVFRCSACAKWFGADDLGRCLYHEERPHFADDFRMHG----------------AYGCCGAPCLRFSAYADVAGCRCREHRIDPRRGSAKPSTLRLLQRQGKLIAHAAKRAGLRSPGPTGEPASSANSGAE 401
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: A0A7S4HC00_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HC00_GUITH) HSP 1 Score: 219 bits (557), Expect = 6.180e-56 Identity = 134/391 (34.27%), Postives = 195/391 (49.87%), Query Frame = 1
Query: 694 DVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDRSPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVCHSHPQQEEACFPREGGGNRGGLGQEGGGGDGYYPCCKKSAYRFALD---PAPLGCVAHDHYFRDED-EDPRVLRVLRLQRHSI 1854
+++ IHVCDE+RGI +DF C +++LL EM YFQSYL G+ + D+IDI VHCD++IF+WL +Y++ N PPL+ +SILISS FL+MQ+LVE CL+FV + EI+K+PIDL+CL ++++ +L+ ++ E+L DR+DKLLSR++ K+IE F+ DN I C C LF+ K C A + F G ++ H + W + + + SL R +SW +YW +WG+ + C C F A ++ C PQQ F R G G YPCC A RF GC A H +E+ ED L L ++RH++
Sbjct: 206 ELIVIHVCDENRGINKDFTCRKDVLLSEMAYFQSYLNGSEAS-DDIDISVHCDIQIFQWLIKYLNEPNS-------------------------------------------------PPPLDTTNVISILISSQFLKMQKLVELCLQFVCRNANEILKMPIDLNCLNQELLTKLSAYLTPEELEDLNDRRDKLLSRLYMKKIEALFQS----DDNMISRCAFCGKLFALKNRSKMACSKAKIFIDFNGSVIAEHAPVPNWDVNKYLLSLRARKLSWREIYWKIWGMIATMRCKVCGNYFTASELEHCAFCPQQP--LF-------RPGQNM------GMYPCCNTPAIRFDTSNFTKTRRGCCAKSHVIDEENAEDASTLTQL-MKRHAL 526
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: S4RH33_PETMA (DUF3342 domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RH33_PETMA) HSP 1 Score: 215 bits (547), Expect = 8.100e-56 Identity = 131/380 (34.47%), Postives = 185/380 (48.68%), Query Frame = 1
Query: 682 DSGGDVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDR-----SPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVC--HSHP----QQEEACFPREGGGNRGGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDH 1788
+S G + IHVCDE+RG+ RDF C R+LL++EM+YF YL + ++E+DI VHCD IF+WL +Y+ KRN AD E P LE +SILISS+FL+M LVEEC+R+ H+ ++V P +++C+GE++V+++A + + Q KDRKDK S++ K+IE F SP S +++ CR C L ++ C + + GE++ RH S W L +++LH+ SW VYW LWG L C C +VFL D+ C H+HP EA P G G YPCCK+ RF GC DH
Sbjct: 132 ESQGPTMVIHVCDEARGVKRDFSCPRQLLVQEMRYFSEYLSMEAQRWEEVDISVHCDAHIFDWLMRYV----------KRNTRLADRGEQ---------------------------------PQLEPNNVISILISSEFLKMDSLVEECVRYCHAHMADVVSAPSNMNCIGEELVMRIADLFTHSQAEELKDRKDKFRSKIFCKKIERLFDAEHKNLDSPSSAASLYRCRLCRRLLTKDTQSKLPCVRSQMLIDHHGEILYRHVRESGWDLYVYLSALHKELKSWRNVYWRLWGTVNYLTCSRCNQVFLCKDLSHCLYHTHPALYGDDWEAGAPT---------------GLGIYPCCKQRTIRFDPLQRSKGCKVRDH 453
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Match: UPI001403F5C7 (uncharacterized protein KIAA1841 homolog isoform X1 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403F5C7) HSP 1 Score: 217 bits (553), Expect = 2.210e-55 Identity = 141/425 (33.18%), Postives = 200/425 (47.06%), Query Frame = 1
Query: 682 DSGGDVVKIHVCDESRGITRDFPCERELLLREMKYFQSYLVGASSPYDEIDILVHCDVRIFEWLFQYIHSSNGGETTTKRNAVGADTDENDXXXXXXXXXXXXXXXXXKAWSAERERIDGAGTPPLEVPLAVSILISSDFLQMQRLVEECLRFVGEHLTEIVKLPIDLSCLGEKMVLQLAKIMSLEQLAVAKDRKDKLLSRVHKKRIELDFRDR-----SPHSDNAIHCCRHCAGLFSEKVLDVTTCRAAPPTVGFRGELVRRHEALSPWSLTRTVTSLHRRGMSWTAVYWFLWGLTQPLYCVECREVFLAGDIGVC--HSHP----QQEEACFPREGGGNRGGLGQEGGGGDGYYPCCKKSAYRFALDPAPLGCVAHDHYFR----DEDEDPRVLRVLRLQRHSI-------SYKDWRVAVREE 1890
+S G + IHVCDE+RG+ RDF C R+LL++EM+YF YL + ++E+DI VHCD IF+WL +Y+ KRN AD E P LE +SILISS+FL+M LVEEC+R+ H+ ++V P +++C+GE++V+++A + + Q KDRKDK S++ K+IE F SP S +++ CR C L ++ C + + GE++ RH S W L +++LH+ SW VYW LWG L C C +VFL D+ C H+HP EA P G G YPCCK+ RF GC DH + RV + L L R ++ + DW AV E
Sbjct: 167 ESQGPTMVIHVCDEARGVKRDFSCPRQLLVQEMRYFSEYLSMEAQRWEEVDISVHCDAHIFDWLMRYV----------KRNTRLADRGEQ---------------------------------PQLEPNNVISILISSEFLKMDSLVEECVRYCHAHMADVVSAPSNMNCIGEELVMRIADLFTHSQAEELKDRKDKFRSKIFCKKIERLFDAEHKNLDSPSSAASLYRCRLCRRLLTKDTQSKLPCVRSQMLIDRHGEILYRHVRESGWDLYVYLSALHKELKSWRNVYWRLWGTVNYLTCSRCNQVFLCKDLSHCLYHTHPALYGDDWEAGAPT---------------GLGIYPCCKQRTIRFDPLQRSKGCKVRDHVVSRASGEAGPSARVHQDLLLHRDAVCVPFTPSASSDWTAAVATE 533 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig87.16286.1 >prot_C-linearis_contig87.16286.1 ID=prot_C-linearis_contig87.16286.1|Name=mRNA_C-linearis_contig87.16286.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=931bp MSRGDGQGKPGAAAAGAAAAVADSLSIRGTGHTAGRCVSPVHGSSPGYLAback to top mRNA from alignment at C-linearis_contig87:216680..228112- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig87.16286.1 ID=mRNA_C-linearis_contig87.16286.1|Name=mRNA_C-linearis_contig87.16286.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11433bp|location=Sequence derived from alignment at C-linearis_contig87:216680..228112- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig87:216680..228112- >mRNA_C-linearis_contig87.16286.1 ID=mRNA_C-linearis_contig87.16286.1|Name=mRNA_C-linearis_contig87.16286.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5586bp|location=Sequence derived from alignment at C-linearis_contig87:216680..228112- (Chordaria linearis ClinC8C monoicous)back to top |