mRNA_C-linearis_contig86.16222.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 703 bits (1814), Expect = 2.450e-216 Identity = 351/547 (64.17%), Postives = 414/547 (75.69%), Query Frame = 3
Query: 4485 HNPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRAT-TGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATET-LQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRD 6119
+NP +STL+ TTF NN G NGGG+AL G C+L +D + +S++ N+A V+GGAVFVS AGTG AF + +FVSNSAQ+GGAV+TFGSG SK V + EPP+PT FDRCRFVGNRAT TGGAID+AAGYD + TFEDNAAGTGGALRLAGTA I CSFVEN+S DGGGA +SNIG ++ I+F GNGF CP GMFL YN S D +E VCDGC FAEPLL P+C + + HS S GK TLEALSI+RGYWRAT TSE V+ACYH +ACLGG TGT+GYC +GY+GPYCA+CS G++AQ GF C +CS S G+VLAV G+G+VERVA YIPL SVKIV+VAWQ++TQFT +A +TYPD YQTFLDGL +FNFDL WILSA C+ D+DFHDRLLMSTIGPIIAV+ L CTY AA RIHRGAT+T LQNV KHV +VLLL+F VYSSVSS LF TFAC L GK+YLR DYRIECDS +H+GF+VYAG M++VYT+GIP Y LL++DRD
Sbjct: 710 YNPSESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRD 1256
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 708 bits (1828), Expect = 3.690e-215 Identity = 354/548 (64.60%), Postives = 412/548 (75.18%), Query Frame = 3
Query: 4488 NPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRAT-TGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFE 6128
N +S + I T+F NN G NGG + LLG C L V+P V + N+A VAGGAVFVSGAG GPAF++ TF SNSAQVGGAV+ FGSGNSK V++ EPP+PT F+RC FVGNRAT TGGAIDSAAG+D + TFEDNAAGTGGALRLAGTA I+ CSFVENFS+D GGA +SNIGT+ +ISF NGF CP+G FL YN S D +EAVC+GC AC GC FA+PLL P C++ + HS SS G+ TLE LSI+ GYWRAT + V+ACYH DACLGG TGTSGYC +GYEGPYCAICSEGY+AQ+ F C CS + G+ LA GRG+VERV RYIPL SVKIV+VAWQI+TQFT +A VTYP YQ FL+GL VFNFDLSW+LSA C+VD+DFHDRLLM+TIGPI A L L CTY AAVRIHRGATETL+NVRHKHV +VLLLTF VYSSVS+ LF TFAC L+ GK YL DYRIECDS KH+ F+VYAGFM+++YT GIPA Y+ LLF+DRDV +
Sbjct: 902 NLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLK 1449
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 640 bits (1652), Expect = 1.120e-194 Identity = 325/545 (59.63%), Postives = 397/545 (72.84%), Query Frame = 3
Query: 4500 STLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVE-VSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRAT-TGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFE 6128
STL + T F+NNT GANGG LALLG L V+ G E VS++GN+A VAGGAVFVSG G GP F+ A F+SNSAQVGGAVST GSGN K ++ PP+PT FD C F+ NRAT TGGAIDSAAG D+ + TF+ N AGTGG LRLAGTA +D CSFV+N S+D GGA +SNIG++ + +I+F GN F C GM+LDYN SG+PYEA C GC ACDGC F EP + P C++ + H S+GG TLE L +ERGYWRA+ +SE V ACY+ DACLGG TG +GYC KGYEGPYCA+CS+GYT ++ F C++CS + LA G+V R+ +YIPL SVKIVIVAWQILTQFT++A VTYPD Y+ FLDGL+VFNFDLSW+LSA CI DIDFHDRLL ST+ P+I +LFL TY AAV ++RG E+LQ + +KHVSLVLLLTF++YSSVS+ LF F C +L+ G +YLR DY I+CDS KH+ F+VYAGFM+VVY +GIPA YA LLF+DR V +
Sbjct: 553 STLVMNGTTAFVNNTCGANGGALALLG--GLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFF-EPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLK 1094
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 613 bits (1581), Expect = 2.700e-185 Identity = 334/550 (60.73%), Postives = 405/550 (73.64%), Query Frame = 3
Query: 4485 HNPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRAT-TGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGR--GLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQN-VRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDV 6122
+N R STL I T F+NNT G +GGGLA S+++D V++ GN+A VAGGAVFVSGAG G F AVS GSGN K + E P PT FDRC FVGN+A+ TGGA +SAAG D+ + F N AGTGGALR+AGTA ++ CSFV+N S+DG GA +SNIG I++++ I F N F CP+G FLD N SGDP+EAVC GC I CDGCVF + L+ P CSE +AHS S+GG TTL+ +SI+RGYWRAT+ SE V+ C+ DACLGG TGTSGYC +GYEGPYC+ICS GYT Q+GF C+KCS + AG ++ XXXXXXXXXXXXXXX G GLVER+AR+IPL SVKIVIV+WQILTQFT++A VTYPD YQ FLD ++VFNFDLSW+ S CI DIDFHDRLL+STI P++A+ FL CT A R +RG+ + LQN V KHVS+ LLLTF+VYS+VSS+LF +FAC +L GK+YLR DYRIECDS H+ F+VYAGFMIV+Y +GIPA YAGLLF+DRDV
Sbjct: 518 YNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDT-AGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVFEQGLVGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDV 1066
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 601 bits (1549), Expect = 3.590e-183 Identity = 314/553 (56.78%), Postives = 389/553 (70.34%), Query Frame = 3
Query: 4488 NPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRAT-TGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFES*AEG 6143
+P DSTL I T F+NNTSG NGG LALLG S+ V+ G E S+V NSA +AGGAV+VS GP FS F SNSAQVGGAVS+ GSGN K E + PT F RCRF NRAT TGGA+DSA+G D F N A TGGALRLAG A + CSFVEN S+DG GA +SN+G I+ +S+ +F GN F+C FL+Y SGD + C GC CDGCV +P + P+CS+ + HS S GG TLE LSI+ GYWRATN+S V+ACY+ DAC+GG TG + YC +GYEGPYCAICS+ Y+AQ+GF CSKC + G++LA G + + RY+PL ++KI++VAWQI+TQFT+ A VTYPD YQ FL+GL+VFNFD+SW+LSA C++D+DFHDRLL+STIGPI+A+LFL TY A RI+RG TLQ V +HVS+VLLL F+VYS VSS++F TFAC+QL+GG +YLR DYRIECDS KH+GF+VYAGFMI++Y +GIPAFY LL +DRDV E +G
Sbjct: 313 SPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTG-ETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKG-GENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNY-TSGDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDG 860
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 594 bits (1532), Expect = 7.830e-181 Identity = 307/547 (56.12%), Postives = 376/547 (68.74%), Query Frame = 3
Query: 4485 HNPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRA-TTGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDV 6122
+NP+ S L + LALLG S+ + V +VGN+A VAGGA+FVSG GP F + + VSNSAQVGGA+S GSG S + E P PT F++CRF NRA TGGA+D+AAG D + FE N AGTGGALRLAGTA ++ CSFVEN S+DGGGA +SNIG ++ +S++SF N + C GMFL+ SG YEA+CDGCP+ C+GC F EP L P CS+A+ HS SSGG TL+AL IE GYWRAT +SE V+ CY+ DACLGG TG+ YC +GYEGPYCA+CS GYTA++G CSKCS + L V RG+VER R++PL SVKIVIVAWQILTQFT++A + +P YQ FLD L +FNFDL W+LSA C+ D+DFHDRLL+STI PI+ +LFL Y AA R ++E LQ V HKHVSLVLLLTF+VY+SVS++LF TFAC +LD K+YLR DYRIECDSPKH F+VYAGFMIV+YT+GIPA Y G LF+D DV
Sbjct: 269 YNPQGSYLIVXXXXXXXXXXXXXXXXALALLGGLSVTIGTENTV-FVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNP-EDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDV 813
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 585 bits (1509), Expect = 9.660e-173 Identity = 309/554 (55.78%), Postives = 383/554 (69.13%), Query Frame = 3
Query: 4476 TPAHNPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRA-TTGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGR--GLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFE 6128
T A + +S L I T F +N++G NGGG+AL +L + V+VS++GNSA VAG A+FVS GP F+ +S FGSG +S PT FD C+F+GN+A +TGGAI+SAAG D++ FE N+AGTGGALRLAG A I CSF EN S++G GA +SNIG I+ +++ SFDGNGF CPAG F + S D +EA+C+GC CDGCVFAE L+PIC+E + HS S GG TL+ LSI+RG+WRA+ +S V+ACYH DACLGG TG SGYC +GYEGPYC ICS+GYT Q+ F CSKCS ++AG + GR G+VE V RYIPL S+KIVIV+WQILTQFT++A VTYPD YQ LD L+VFNFDLSW+LSA C+VD++FH RLL+STI PI+A+L L CTY AA RI+RG E L + +KHV++VLLLTF VYSSVSS LF FAC+ LD KDYLR DY IEC+S +HRG +VYAGFMIV+YT+GIPA YA LLFK RDV +
Sbjct: 803 TNALSTSNSILFINGTTIFSDNSAGGNGGGMALFVDVALNIGT-VDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDL-----PTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLK 1350
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 577 bits (1486), Expect = 1.890e-170 Identity = 303/556 (54.50%), Postives = 380/556 (68.35%), Query Frame = 3
Query: 4467 PSQTPAHNPRDSTLHIGAATTFMNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRATT-GGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGD-PYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFE 6128
PS +NP +S+L I TTF NNT G NGG LAL CSL+++ +VS+ GNSA AGGAVFVSGAG GP FS +F+SN AQVGGA S FGSGN + + P PT FDRCRF+ N ATT GGA+DSAAG D V+ F+ N+A GGALRLAG S GA +SNIG ++ +++ SF GNGF C +FL+Y+ + + +EAVCDGC +ACDGC F EP P CS+ + H S+GGK TLE LSI+ GYWRAT++S+ ++ CY+ DACLGG TGT+GYC + YEGPYC+ICS+GY + +G+ CSKC S + G+V AV ++ER+ Y+PL SVKIVIV+WQILTQF + A V YP YQ FLDGL VF FDL W++SA C++D+ FH RLL +TIGPI AVL L TY AA RI+R A E L+ + KHV + LLLTF+VYSSVSS LF TFAC++L+ GK+YLR DYRIECDS KH+ F+VYAGFMI++Y LGIP Y+ LLFKDR+V +
Sbjct: 713 PSYDSEYNPLESSLVINGTTTFFNNTCGENGGSLALFDACSLDINT-ADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGM--LSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLK 1265
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 585 bits (1509), Expect = 1.400e-168 Identity = 310/525 (59.05%), Postives = 371/525 (70.67%), Query Frame = 3
Query: 4566 LALLGTCSLEVDPGVE-VSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNRAT-TGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDYNVSGDPYEAVCDGCPIACD--GCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAGVVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFE 6128
LALLG L V+ G V + N+A VAGGAVFVSGA GP S F +N AQVGGAVST GSGN K + PP+PTIF RCRFV N+A TGGA+++AAG D + C F GTGGALRLAGTA ++ CSFVEN SEDGGGA +SNIG+I+++ +IS+ GN F C GMFLD+N SGDP EA CDGC CD GC F EP L PIC+ A+ H+ S+GG + L ++ G+WRAT + V+ CY+ +ACL G T +SG C GYEGPYC+ICS+GYTA + F CS+CS S G++LA RG VER+ RYIPL S KIV+V+WQILTQFTA+A VTYPD YQ FLDGL VFNFDLSW+LSA CIV +DFHDRLL+STIGPI+A+LFL TY AA RI+RGATETLQ + ++HVS+VLLLT VYSSVSS LF TFAC L G+ YLR DYRI CDS KH+ +VYAG M+VVYT+GIPA Y LLF+DRDV +
Sbjct: 1383 LALLGG-GLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-FEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLK 1905
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 7.510e-167 Identity = 296/525 (56.38%), Postives = 365/525 (69.52%), Query Frame = 3
Query: 4566 LALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGPAFSSATFVSNSAQVGGAVSTFGSGNSKSVSEAEPPDPTIFDRCRFVGNR-ATTGGAIDSAAGYDSVIACTFEDNAAGTGGALRLAGTALIDGCSFVENFSEDGGGAVISNIGTIARLSDISFDGNGFHCPAGMFLDY-NVSGDPYEAVCDGCPIACDGCVFAEPLLSPICSEAVAHSASSGGKTTLEALSIERGYWRATNTSETVIACYHDDACLGGETGTSGYCRKGYEGPYCAICSEGYTAQIGFVCSKCSSSTAG--VVLAVXXXXXXXXXXXXXXXXXXXXXXXXXGRGLVERVARYIPLHSVKIVIVAWQILTQFTALAFVTYPDAYQTFLDGLNVFNFDLSWILSAWCIVDIDFHDRLLMSTIGPIIAVLFLGCTYTAAVRIHRGATETLQNVRHKHVSLVLLLTFVVYSSVSSMLFSTFACNQLDGGKDYLRPDYRIECDSPKHRGFKVYAGFMIVVYTLGIPAFYAGLLFKDRDVFE 6128
+ L +L V++S+VGNSA VAGGA+F+SG TGP F+ F SN A++GGAVS FG G + + +PT FDRCRFV N+ A+TGGAI+SAAG D+ FE N+AGTGGALRLAG A CSFV N +++G GA +SNIG I+ + F GN F C + M+LD+ S DP+E +C GC + C+GCVF E LL P C+E + H+ S GG TLEALSI+ GYWRAT +SE V+ACYH +ACLGG T TSGYC +GYEGPYC++CS GY+ Q+GFVCSKC G V+L V G G +ERV RYIPL SVKIVI AWQILTQFT++A VTYPD Y+ FL L++FNFDL W LS C +D+DFHDRLL+STI PI A+LFL CTY A ++R +TL V+HKH S+VLLLTF VYSSVSS+LF +FAC +L K YLR DYRIECDS KH+GF+VYA FMI+VYT+GIPA YAGLLF+DRD+ +
Sbjct: 941 IVLFEDAALNTSFNVDISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCG----IEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLK 1461 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig86.16222.1 >prot_C-linearis_contig86.16222.1 ID=prot_C-linearis_contig86.16222.1|Name=mRNA_C-linearis_contig86.16222.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=534bp MNNTSGANGGGLALLGTCSLEVDPGVEVSYVGNSAVVAGGAVFVSGAGTGback to top mRNA from alignment at C-linearis_contig86:318086..328240- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig86.16222.1 ID=mRNA_C-linearis_contig86.16222.1|Name=mRNA_C-linearis_contig86.16222.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10155bp|location=Sequence derived from alignment at C-linearis_contig86:318086..328240- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig86:318086..328240- >mRNA_C-linearis_contig86.16222.1 ID=mRNA_C-linearis_contig86.16222.1|Name=mRNA_C-linearis_contig86.16222.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3204bp|location=Sequence derived from alignment at C-linearis_contig86:318086..328240- (Chordaria linearis ClinC8C monoicous)back to top |