mRNA_C-linearis_contig86.16219.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: D8LSD1_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD1_ECTSI) HSP 1 Score: 488 bits (1256), Expect = 8.970e-166 Identity = 303/506 (59.88%), Postives = 339/506 (67.00%), Query Frame = 3
Query: 54 SKLDEIRAAVAECNVLEDGGTPEVRQRENAQRLRVFRQLDSYAAELTASAAAAAESSEEIATREALQRELEVLASTLVMRPIQPKSWPLFEAIDLVWRVPAVMLFLLFMGFVVSIPLIMLTLVEQQLFLARSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGLASLLIRLDCAWLLLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAAEIKSRDGLSRRLREEMLEALENDPSPDAGTALDPSRRAAGVAAAGVTYWAATSTTSALVRFSLREGVSTWALVLGALAYVFLSTVFVFYVYARKCFSKPATAR-HGSGGXXXRGRAVENGDSGVALVG 1568
+KL++IRAAVAEC+V +DG T E RQ+ENA+R+RVF++LD+YA +L AAAA S+E+ + E TLV +Q P V GFVVSIPLIMLT+VEQQ+FLA + +GGL+S+LIRLDCAWLLLLMGI RAE + E SLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELL VPVLGWIMASRGAIPINR HRASAVQALAEAAERARELQMFVAMAPEGTR+KTGQLGPFKKGA HMQEQL WPVIPVTI GAYELFPLKWNVNQ GKVVVKYH+PIEAAEIKSR+GLS+RLR+E+LEAL+ D P+AG ALDPSRRAA +AA TY AA ALV FS REGV+ WALV GA+AYVFLSTVFVFYVYARKCFS P G GG + D GVA+ G
Sbjct: 4 TKLEDIRAAVAECHVGKDGSTHEARQQENARRIRVFKKLDAYAQDLVQQLAAAAASNEDTSRIE----------GTLVPACLQRAGPPTGAGCPGVDTG----------GFVVSIPLIMLTMVEQQIFLALN---------------------------------------------------------GGSNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFMGE-SLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKGAFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSREGLSQRLRQEILEALDQDDVPEAGAALDPSRRAASLAATAFTYLAAARAVKALVSFSRREGVAVWALVAGAVAYVFLSTVFVFYVYARKCFSAPRRVGVRGGGGAGTVSGGLGLTDDGVAVNG 431
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A6H5L1M9_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M9_9PHAE) HSP 1 Score: 437 bits (1125), Expect = 1.340e-146 Identity = 292/550 (53.09%), Postives = 328/550 (59.64%), Query Frame = 3
Query: 54 SKLDEIRAAVAECNVLEDGGTPEVRQRENAQRLRVFRQLDSYAAELTASAAAAAESSEEIATREALQRELEVLASTLVMRPIQPKSWPLFEAIDLVWRVPAVMLFLLFMGFVVSIPLIMLTLVEQQLFLARSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGLASLLIRLDCAWLLLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAAEIKSRDGLSRRLREEMLEALENDPSPDAGTALDPSRRAAGVAAAGVTYWAATSTTSALVRFSLREGVSTWALVLGALAYVFLSTVFVFYVYARKCFSKPATAR-HGSGGXXXRGRAVENGDSGVALVGGAREGVGGKSDAEAVGTTEFSRLLGGDASSQE-----VDQMKDR 1685
+KL+EIRAAVAEC+V +DG T E RQ+ENA+R+RVF++LD+YA +L AAAA S+E+ + EA QREL+ LASTLV+RP+QPK PL EA+DL+WRVPAVMLFLLFMGFVVSIPLIMLT+VEQQ+FLA + +GGL+S+LIRLDCAWLLLLMGI RAE + E SLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELL VPVLGWIMASRGAIPINR HRASAVQ GA HMQEQL WPVIPVTI GAYELFPLKWNVNQ GK E+LEAL+ P+AG ALDPSRRAA +AA TY AA ALV FS REGV+ WALV GA+AYVFLSTVFVFYVYARKCFS P G GG + D GVA+ GG GV GT E SR GG+ +E DQMK R
Sbjct: 4 TKLEEIRAAVAECHVGKDGSTHEARQQENARRIRVFKKLDAYAQDLVQQIAAAA-SNEDTSRIEACQRELDALASTLVVRPVQPKCRPLLEALDLIWRVPAVMLFLLFMGFVVSIPLIMLTMVEQQIFLALN---------------------------------------------------------GGSNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFMGE-SLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQ-----------------------------------GAFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGK--------------------------EILEALDQANVPEAGAALDPSRRAASLAATAFTYLAAARAGKALVSFSRREGVAVWALVAGAVAYVFLSTVFVFYVYARKCFSAPRRVGVRGGGGAGTVSGGLGLTDDGVAVNGGEGRGV---------GTAELSR--GGEGRRREGESDVTDQMKGR 422
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A835YU14_9STRA (PlsC domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU14_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.870e-32 Identity = 71/180 (39.44%), Postives = 109/180 (60.56%), Query Frame = 3
Query: 675 RLDCAWLLLLMGIHARAEGLN---ERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWN-----VNQPGKVVVKYHKPIEAAE 1190
R+ W+LL+ G+ R EG + +PA+++FTH S LD +++L P A+VK + VP LGW+ + G +PI+R R +AV ++ A E + + +A++PEGTR++TGQL PFKKGA H+ +QL WP++P+TI GA+ L+P + +PG V V+YH I E
Sbjct: 35 RILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRVGE 214
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A2A4Z296_9FLAO (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A4Z296_9FLAO) HSP 1 Score: 118 bits (296), Expect = 9.910e-27 Identity = 66/162 (40.74%), Postives = 97/162 (59.88%), Query Frame = 3
Query: 702 LMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAA 1187
++GI + G+ +P + + H S LD +V+ +LP L + K+EL VP++GW M G I I+R ++ AV++L +AA + + + V M PEGTRTKTG LGPFKKGA H+ G ++P+ I G Y ++P K PG VVV+ KPIEA+
Sbjct: 49 IVGIKLKVHGVENVPTDKPVIFVANHCSHLDIIVLCRSLPVNLHFIGKKELAWVPIVGWYMFIAGHIFIDRSNKRKAVESLKKAAVKIKNGKRVV-MYPEGTRTKTGALGPFKKGAFHLALDAGVSIVPIHIDGTYNVWPAKSRTITPGDVVVRIGKPIEAS 209
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A5C6RRA9_9FLAO (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Vicingus serpentipes TaxID=1926625 RepID=A0A5C6RRA9_9FLAO) HSP 1 Score: 113 bits (283), Expect = 5.810e-25 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 3
Query: 693 LLLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAA 1187
LL + GI G L RP + + H S LD + +LP L + K+EL VP++GW M G I I+R ++ A+++L A+++ + + V M PEGTR+K G+LG FKKGA H+ Q G P++PV+I+G Y ++P N PG V V+ KPIE++
Sbjct: 45 LLWIAGIKLEVNGKENVPLDRPVIFIANHCSHLDIGTLCRSLPVNLHFIGKKELAWVPIVGWYMWVAGHIFIDRSNKKKAIKSLEVASQKIKSGKSVV-MYPEGTRSKNGKLGNFKKGAFHLAMQSGVPIVPVSIKGTYNVWPANSNKITPGNVSVEIGKPIESS 208
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A4D9D1W3_9STRA (PlsC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1W3_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.650e-24 Identity = 85/272 (31.25%), Postives = 140/272 (51.47%), Query Frame = 3
Query: 696 LLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAAEI-----KSRDGLSRRLREEMLEALEN--DPSPDAGTALDPS-------RRAAGVAAAGVTYWAATSTTSALVRFSLREGVSTWALVLGALAYVFLSTVFVFYVYARK 1469
L L G+ EG + P ++LF H S LD + L + P+ ++ K+++ +P +GW+ +PI+RRHR A++ L A RA VA++PEGTR+KTGQL FKKG ++Q + + PV I+G +EL+P K+ PG+V + Y PI+ + K+++ LSR +R +M +A+E+ + G +PS +RA V + + +W + S GVS AL L+Y T ++ +Y ++
Sbjct: 202 LYLAGVFYTEEGKAKGGYRTPLVVLFQHGSNLDGFLFLDSFPQFFKSIGKDDIYLMPYVGWLAYVIATLPIDRRHRNEAIKQLGRAT-RACASGTAVALSPEGTRSKTGQLMRFKKGPFYVQAESRASIAPVVIQGTFELWPPKYFFTCPGQVCMNYLPPIDPDSLPAKVGKNKEELSRFVRRQMFDAIEDLTAEASSGGKGRNPSAAPLTWFQRALNVVSICLFWWVVRIVWLLVTSVSDARGVSRAALAGAFLSYTITVTASLYILYCKR 472
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A3P3Y9V1_PLABS (1-acyl-sn-glycerol-3-phosphate acyltransferase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y9V1_PLABS) HSP 1 Score: 116 bits (290), Expect = 1.670e-24 Identity = 69/186 (37.10%), Postives = 103/186 (55.38%), Query Frame = 3
Query: 690 WLLLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAAEIKSRDGLSRRLREEMLEAL 1247
W L +G+ R G E+ RP + +F+H S LD + + P L + K L VP++GW+ A G IPI+R+ R A+++L A + +APEGTR+ TG L FKKG HM + PV+PV I AY+L P + + +PG V V+ PI ++ + +GLSR +R+ +L AL
Sbjct: 171 WAALCLGLQVRVIG-TEKLPCRPYLFMFSHGSMLDPIALGAISPVPLRFIGKRVLFMVPIIGWLFALYGHIPIDRQSRTDAIESLKAGARLMVRSGASIGIAPEGTRSLTGHLQSFKKGPFHMAIRTRMPVVPVIIEDAYQLLPPRRWLPRPGCVTVRALSPIAVSDQDTVEGLSRTVRQAILAAL 355
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A2A5BAJ8_9FLAO (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A5BAJ8_9FLAO) HSP 1 Score: 108 bits (271), Expect = 2.550e-23 Identity = 63/164 (38.41%), Postives = 95/164 (57.93%), Query Frame = 3
Query: 693 LLLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEA 1184
L+ + G+ + G+ +P + + H S +D V+ P L + K+EL+ VP++GW M G I I+R +R AV++L +AA + + + VAM PEGTR+K G+LG FKKGA H+ G +IPV I+G Y L+P N PG V V+ KPI++
Sbjct: 46 LIWIAGVKLKTYGVENVPTDQPLIFIANHCSYIDIGVLCRIAPVNLHFIGKKELMWVPIIGWYMVVAGHIFIDRSNRKKAVESLKKAALKIKNGKC-VAMYPEGTRSKAGELGEFKKGAFHLALDAGVCIIPVHIKGTYSLWPATSNTITPGDVTVRIGKPIDS 208
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A0L0GAF0_9EUKA (PlsC domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAF0_9EUKA) HSP 1 Score: 112 bits (279), Expect = 7.760e-23 Identity = 75/210 (35.71%), Postives = 107/210 (50.95%), Query Frame = 3
Query: 663 SLLIRLDCAWLLLLMGIHARAEGLNERSLS--RPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMA-SRGAIPINRRHRASAVQALAEAAERARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAAEIKSRDGLSRRLREEMLEALENDPSPDAGTAL 1283
LL+ + L+ G +GL R +P + +F H S LD +V+L T P V K+ L +PV+GW + G+IP++R R AV L + + + +APEGTR GQL PFKKGA H+Q LG PV PV G +EL+P +N PG V ++Y + + + + R++R MLE D DAGT L
Sbjct: 149 DLLVTVVANGLVRCSGAVPTVQGLETREYPPPQPYLTMFAHPSNLDPMVLLRTSPVIHKGVGKQSLFMIPVIGWAFRFAMGSIPLDRGSRKRAVAQLDRLKASMQRWRRCLTIAPEGTRQPQGQLQPFKKGAFHLQHDLGCPVAPVVHFGPFELWPRNRMMNAPGHVTIRYMPLVYPDKGADHNQVRRQVRRLMLEESCKDVPKDAGTTL 358
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Match: A0A2N3A908_9BACT (1-acyl-sn-glycerol-3-phosphate acyltransferase n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A2N3A908_9BACT) HSP 1 Score: 106 bits (265), Expect = 1.660e-22 Identity = 67/190 (35.26%), Postives = 108/190 (56.84%), Query Frame = 3
Query: 693 LLLLMGIHARAEGLNERSLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLGVPVLGWIMASRGAIPINRRHRASAVQALAEAAER---ARELQMFVAMAPEGTRTKTGQLGPFKKGALHMQEQLGWPVIPVTIRGAYELFPLKWNVNQPGKVVVKYHKPIEAAEIKSRDGLSRRLREEMLEALEN 1253
L+ + G+ +G + P + + H S LD V+ G+LP L + K+EL+ PV+GW M G I ++R +R A+ ++A+AA++ + L +F PEGTR+K+G++G FKKGA H+ Q +IPVTI G Y+++ + PGKV V KPI+ + S++ +S + E + LEN
Sbjct: 46 LMRIAGVKLTVKGKENVPQNEPVIFIANHCSHLDIGVLCGSLPVNLHFLGKKELMWTPVVGWYMFVAGHIFVDRSNRKKAIVSIAKAADKISKGKSLMIF----PEGTRSKSGKIGVFKKGAFHLALQANVKIIPVTINGTYKVWKPDSSQINPGKVTVFIGKPIDQTQY-SKENISAFVNEGVNRILEN 230 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig86.16219.1 >prot_C-linearis_contig86.16219.1 ID=prot_C-linearis_contig86.16219.1|Name=mRNA_C-linearis_contig86.16219.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=546bp MSKLDEIRAAVAECNVLEDGGTPEVRQRENAQRLRVFRQLDSYAAELTASback to top mRNA from alignment at C-linearis_contig86:269874..275970- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig86.16219.1 ID=mRNA_C-linearis_contig86.16219.1|Name=mRNA_C-linearis_contig86.16219.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6097bp|location=Sequence derived from alignment at C-linearis_contig86:269874..275970- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig86:269874..275970- >mRNA_C-linearis_contig86.16219.1 ID=mRNA_C-linearis_contig86.16219.1|Name=mRNA_C-linearis_contig86.16219.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3276bp|location=Sequence derived from alignment at C-linearis_contig86:269874..275970- (Chordaria linearis ClinC8C monoicous)back to top |