mRNA_C-linearis_contig86.16218.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: D8LSD0_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD0_ECTSI) HSP 1 Score: 993 bits (2566), Expect = 0.000e+0 Identity = 924/1888 (48.94%), Postives = 1045/1888 (55.35%), Query Frame = 2
Query: 119 MSSSSVPPADAL-EVLAFARLCPLADGHADN-----QSIEYEILRDADVDDEEEPEEEILQLSIPEEHRNTVGGKETVLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRD-KPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXX---------RSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQ-NPGAHVPYRESTLTSVLRSSLG-RECRPVFVVTLSVDADDLAETVASCRFAQSCRKAVCQQ-PD----ADDRLEPGEELRILRREAEGLKAALATKDDLLGKLAEEITEKDGDLVAVTERLEALEAAHVFHTTRSPSEEDKGACAVLAQALADGSDEAEEALE---ELDRVSALQCCRKLQEIVVVEVKQLHEQVQAFEEEERLAQKARP-------------PALPEDGSRSGSGRSIRHRKNASTA------EASHVSGNND--GGGIDIFLDXXXXXXXXXXXXXXXXXXXXXXXXXSSDLAEDQPAAKVGHRGGNATEHSFGEALDDDT---SGRRNDNADVNDRGSSGEDXXXXXXXXXXXXXXXXXDDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDP--------------------------------APEAAPRKGSALGVTPANPKGTSQVQGNXXXXXXXXXXXXXXXXXXXXXXXXSSRASIGSSARSQRRRNEADSTNXXXXXXXXXXXSGKSNSAASAREPGDCD-------------------------DGHSSLAGGAGEEQGTSRGSDEPKGPPISNSAQPPRTAGLQRGLGTRDVAASARDEADKG----DAQPADRLSSPSHRRNLARNLGNRGFGTRDFGTSPDF--------GRGAAGDGSESLDEGRPPPLSVVMDDDMIRGRDGKPVL--HRTTHGAGGXXXXXXXSGALGSENTASVAYDDGRQRPLLNGGGFFVMHGRFGSPQMRFVWMSRDLGFIFWRCCGHTAVKGSAKTTMFDFVHLGLHKKTAASA-KTTASSTGKALKQIVLTGGAGRNRLVLELDGGNTEAEADLVQTWFEAFNYAVNFANTEVITKMLQPSGRR-PTLTQSAATRRASLSATLPAPRTQTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKSRPLASLWSVPPSPPPRSGMPTDDLSSGSFGSAGGXXXXXXXXSSAVMRTAGSGGGFHGS----QASLLVRPPPIDTSSLVGARGPASPPPRGQYTGPSIPSSPRRETYGGRPD------------HRDESE-----ECKEKKRFMKALATEAAAVITMGTLNPTNLHSSTRXXXXXXXXXXXXXXXXXXXXXXXNSSFRSDSA--SRNKALSLPFRQLIAQHAPSVADRHPSGRLASPQARVGAVRRGSGCNGMPLTGIRRRGSGTGVGAENIRLFVADDHRPAGRPSSPRARAGAERRGSGCDGVPLTGVRRRGSGSGTSAEIAVDGARWARGKHLNGVRRGSQSGSGXXXXXXXXXXXXXXXGSIRWADGKSLTGVLRRGS-GAGD-ETDAVADDGIRWASSKPSIKPRSSGMRRADSYRGGPG-----IPKAIASGGLAVQHEDVSDGTRRFSSTNSHHNAARQSSFIATGHAVEQGRERTASPTRALARATARRLSALGAKAVGGMGLGGTNIS 5323
M SSSV PA+ + + LAFARLCPL +G D+ Q +EYE+LRDA+ D EP+EEILQLSIPEE+R+TVGG ET LY+F GVLRDDATQE+VF ALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGE FE+RGLAPRAIG+LFRE+RNAETS S Y VRASYLEVYEDR+YDLLDVSNRD KP+E+WATVT + DGEGNQV KGLT F+VD EED+LNLFFMGNSHR+MGETPAN SSRSH VFTL+ +S TRT+VS+CELT VDLAGCERMYKND GYS GLD A V+L D S + AR+AAREREGKKIN LQKLE VMRALQ NPGAHVPYRESTLTSVLR LG ECR VFVVTLS+D +DLAETVA+CRF QSCRKA+C PD D RLEP EELRILRREA +KA+L K+DLL +LAEEI EKDGD+ E+LEA+E AH FHTTRSP+EEDKGACAVLA+ALADGS++AEEALE ELDRVSALQCCR LQ+I++ EV QL EQVQAFEEEE+LA+K A P D RSGS +S ++ + + E+ ++ +ND GG I XXXXXXXXXXX D ++ + G AT L++D SG + +N D RG E XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P K SA G TPA KG S+V N S S A S+R XXXXXXXXXXX G N A +E DG S G E G R D+ + +P R A L+RGLGTR A AR EA D P P HRR+L RN+G G+ DGS+ + GRPPPLSV+ DD+ G P L + GAGG S S + + YD R R LL GGFFVMHGRFG+PQMRFVWMS DLG I WRCCGHTAVKGSAKTT+FDFVHLG HK A+A K A++ G A+ QIVLTGGA RN+LVLELDGGN + +A++VQTWF+AFN+AVNFANTEVI++MLQ SGRR TLTQ+ SL++ LP P Q +S XXXXXXX KSRPLA+L P S P XXXXXXXX GS Q + VRPPPIDTS+ G GPASP PRGQ P PR Y D HRD + E +E+K F+K+LATEAA VI TL TN R XXXXXXXXX SRNKALSLPFRQLIA HAPSVA H P RP+SPRAR GA RRGSGCDG+ G XXXXG RWA GK L+G RRGS G GD +T V DG+RWASSKP+I RS A YR G +P AIAS G A + E S AR + + Q R SPTR ARATARRLSALGAKAVGG+GL GT S
Sbjct: 1 MPSSSVLPAEEVAQTLAFARLCPLVEGEQDDVDDCRQRVEYEVLRDAEDDXXXEPDEEILQLSIPEEYRDTVGGTETALYAFTGVLRDDATQEEVFHVAALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGESFEDRGLAPRAIGYLFREIRNAETSGLSTRYAVRASYLEVYEDRIYDLLDVSNRDDKPMEEWATVTSMTDGEGNQVFKGLTTFDVDNEEDTLNLFFMGNSHRIMGETPANPGSSRSHTVFTLSISSETEEEISTAHGDRDDDGDEIVRDGGDGEKSVTRTVVSECELTLVDLAGCERMYKNDRHGYSAGLDGATDVELS-----DPSAVPEQEARRAAREREGKKINSDLQKLEKVMRALQTNPGAHVPYRESTLTSVLRKPLGGAECRTVFVVTLSLDLEDLAETVATCRFGQSCRKAICGSIPDLPEVGDARLEPSEELRILRREAADMKASLGAKEDLLRELAEEIREKDGDIAEAMEKLEAVEEAHAFHTTRSPTEEDKGACAVLAKALADGSNDAEEALEAPKELDRVSALQCCRNLQKIMMAEVGQLQEQVQAFEEEEKLAKKLGGRLADREVTVTRAIDAAPSDDPRSGSEQSGGGSRSETCSCDDGDLESLPIADDNDDRAGGPTISASETEAXXXXXXXXXXXGLAEVLQQEGGGDGGDESGSTYGSVEGMEATA-----VLENDGKGGSGGQKNNFDA--RGEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYHDDLGSTTESHIQKVARGPSIPQGKTSAFGTTPAQRKGGSRVGAN----------------------------SGSSCASSRRXXXXXXXXXXXXXXXXXXXXEGTQNEAWEEQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDGQS----GWDESSGLMRDKDDATANGPKGAVKPSR-AHLERGLGTR--AFRARGEAAGSTNIRDGDPP----IPQHRRSLTRNVGTXXXXXXXXXXXXXXXXXXXLGDAAGSEDDGSDVVG-GRPPPLSVIADDEAEGAAIG-PFLPSYGNGFGAGGRGSG---SNVFSSGSAGTAPYDSERHRALLTKGGFFVMHGRFGNPQMRFVWMSHDLGTILWRCCGHTAVKGSAKTTLFDFVHLGFHKGALATANKPAAAAAGNAMNQIVLTGGARRNKLVLELDGGNADTDAEVVQTWFQAFNFAVNFANTEVISRMLQSSGRRRSTLTQAXXXXXXSLNSALPVPHAQASSTXXXXXXXGREATTYSAAADDALVPSTPAEARGGGAGVAPLRTKSRPLAALRPAPSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDLAGSTTTSQGASFVRPPPIDTSNPAGFVGPASPSPRGQPARTLSPP-PRMGAYDADGDADFDREEHLGSGHRDYTRDGKDVETRERKEFLKSLATEAATVINNRTLTKTNFDLRPRYDEGETSSPSSSNAXXXXXXXXXXXXXXXXXXXESRNKALSLPFRQLIAHHAPSVASHHAL------------------------------------------------ETPTRRPASPRARVGAVRRGSGCDGLGFGGXX------------------------------------------------XXXXGGARWAIGKPLSGTGRRGSAGTGDSDTGKVLADGVRWASSKPAINTRSITTAPAQPYRERAGSADGRVPIAIASDGQAEESESGXXXXPPPRSRAEAFTTARSARSL-------QERGGATSPTRGFARATARRLSALGAKAVGGIGLAGTGSS 1728
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: A0A6H5L078_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L078_9PHAE) HSP 1 Score: 832 bits (2149), Expect = 3.860e-261 Identity = 860/2014 (42.70%), Postives = 987/2014 (49.01%), Query Frame = 2
Query: 272 EILQLSIPEEHRNTVGGKETVLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEV------------------------RASYLEVYEDRVYDLLDVSNRD-KPVEDWATVTPLDDGEGNQVLKGLTMFEVDTE--------------------------------EDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXX---------RSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQ-NPGAHVPYRESTLTSVLRSSLGR-ECRPVFVVTLSVDADDLAETVASCRFAQSCRKAVCQQ-PD----ADDRLEPGEELRILRREAEGLKAALATKDDLLGKLAEEITEKDGDLVAVTERLEALEAAHVFHTTRSPSEEDKGACAVLAQALADGSDEAEEALEELDR-------------------------------------------------------------------------------------------------------------------------VSALQCCRK------------------LQE--IVVVEVKQLHEQVQAFEEEERLAQKARP-------------PALPEDGSRSGSGRSIRHRKNASTA------EASHVSGNND--GGGIDIFLDXXXXXXXXXXXXXXXXXXXXXXXXXSSDLAEDQPAAKVGHRGGNATEHSFG--EALD-------DDTSGRRNDNADVNDRGSSGEDXXXXXXXXXXXXXXXXX-------------------------------DDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDPAPEAA------PRKGSALGVTPANPKGTSQVQGNXXXXXXXXXXXXXXXXXXXXXXXXSSRASIGSSARSQRRRNEADSTNXXXXXXXXXXXSGKSNSAASAREPGDCDDGHSSLAGGAGEEQGTSRGSDEPKGPPISNS---AQPPRTAGLQRGLGTRDVAASARDEADKG--DAQPADRLSSPSHRRNLARNLGNRGFGTRDFGTSPDF--------GRGAAGDGSESLDEGRPPPLSVVMDDDMIRGRDGKPV-LHRTTHGAGGXXXXXXXSGALGSENTASVAYDDGRQRPLLNGGGFFVMHGRFGSPQMRFVWMSRDLGFIFWRCCGHTAVKGSAKTTMFDFVHLGLHKKTAASA-KTTASSTGKALKQIVLTGGAGRNRLVLELDGGNTEAEADLVQTWFEAFNYAVNFANTEVITKMLQPSGRR-PTLTQSAATRRASLSATLPAPRTQTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKSRPLASLWSVPPS--PPPRSGM--PTDDLSSGSFGSAGGXXXXXXXXSSAVMRTAGSGGGFHGSQASLLVRPPPIDTSSLVGARGPASPPPRGQYTGPSIPSSPR---------------RETYGGRPDHRD-----ESEECKEKKRFMKALATEAAAVITMGTLNPTNLHSSTRXXXXXXXXXXXXXXXXXXXXXXXNSSFRS--DSASRNKALSLPFRQLIAQHAPSVADRHPSGRLASPQARVGAVRRGSGCNGMPLTGIRRRGSGTGVGAENIRLFVADDHRPAGRPSSPRARAGAERRGSGCDGVPLTGVRRRGSGSGTSAEIAVDGARWARGKHLNGVRRGSQSGSGXXXXXXXXXXXXXXXGSIRWADGKSLTGVLRRGSGAGDETDA--VADDGIRWASSKPSIKPRSSGMRRADSYRGGPG-----IPKAIASGGLAVQHEDVSDGTRRFSSTNSHHNAARQSSFIATGHAVEQGRERTASPTRALARATARRLSALGAKAVGGMGLGGTNIS 5323
EILQLSIPEE R+TVGG ET LY+F GVLRDDATQE+VF ALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGE FE+RGLAPRAIG+LFRE+RNAETS S Y V RASYLEVYEDR+YDLLDVSNRD KP+E+WATVT + DGEGNQV KGLT F VD E ED+LNLFFMGNSHR+MGETPAN SSRSH VFTL+ XXXX + ETRT+V++CELT VDLAG ERMYKND G+S GLDDA AV+L D S + A +AAREREGKKIN LQKLE VMRALQ NP AHVPYRESTLTSVLR LGR CR VFVVTLS+D +DLAETVA+CRF QSCRKAVC PD D RLEP EELRILRREA +KA+LA K+DLL +LAEEI EKDGD+ E LEA+EAAH FHTTRSP+EEDKGACA+LA+ALADGS++AEEALEE + Q R LQE + EV+QL +QVQAF+EEE+LA+K A D R+GS +S ++ + + E+ +S ND GG I S+ LAE + G GN + ++G E ++ D G +++ RG E XXXX XXXXXXXXXX ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX + + + A K A G TPA KG S+V N SSR + + S R R ++D N G N A S G K +N A A L+RGLGTR + A D P P HRR+L RN+G G+ DGS+ + GRPPPLS + DD+ +G + L+R GAGG S S + + YD R R LL GGFFVMHGRFG+PQMRFVWMS DLG I WRCCGHTAVKGSAKTT+FDFVHLG HK A+A K A++ G A+ QIVLTGGA RN+LVLELDGGN + +A++VQTWFEAFN+AVNFANTEVI++MLQ SGRR TLTQ L++ L P Q +S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K RPLA+L P S PPP +G P DD S XXXXXXXX + G SQ + VRPPPIDTS+L G GPASPPPRGQ P+ SP RE + G HRD + E +EKK +K+LAT+AA I T TN R S RS +S SRNKALSLPFRQLIA HAPSV H P RP+SPRAR GA RRGSGCDG+ G G GA RWA GK L G RRGSG D++D V DG+RWASSKP+I RS+ A YR G +P AIAS G A + S AR + + Q R ASPTR ARATARRLSALGAKAVGG+GL GT S
Sbjct: 20 EILQLSIPEEFRDTVGGTETALYAFTGVLRDDATQEEVFHAAALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGESFEDRGLAPRAIGYLFREIRNAETSGLSTRYAVLLLSTLIISRPLTLSFFAKKKTVVRASYLEVYEDRIYDLLDVSNRDDKPMEEWATVTSMTDGEGNQVFKGLTTFYVDNEGEKTTMQQLSIACVRNAHRSFCRPGKMSCYGLEDTLNLFFMGNSHRIMGETPANSGSSRSHTVFTLSISSETEEXXXXAHGDRDDDGDDIVRGGGDGEKCETRTVVNECELTLVDLAGYERMYKNDRHGFSAGLDDATAVELS-----DPSAVPEQEAIRAAREREGKKINSDLQKLEKVMRALQTNPAAHVPYRESTLTSVLRKPLGRIGCRTVFVVTLSLDLEDLAETVATCRFGQSCRKAVCDSIPDLPEVGDARLEPFEELRILRREAAEMKASLAAKEDLLRELAEEIREKDGDIAEAMEELEAVEAAHAFHTTRSPTEEDKGACAMLAKALADGSNDAEEALEEKQKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQRDQEQEQHXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAHRTKDDGEGVSDETKELLTITLQENAALAAEVRQLQDQVQAFKEEEKLAKKLGGRLADREVTVTRAIDAARSDDPRNGSAQSGGGSRSETCSCDDGDLESLPISDGNDDRAGGPTISA-------------------GEAAAAVSAGLAE-VLQQEAGGDDGNESGSTYGSVEGMEATAAPENDGKGGGGGKKTNIDARGEEEEXXXXXGQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXVEEGYHDDLGSTTENHSQKVARGSSKPQSKTYAFGTTPAQRKGGSRVGANSGSNCA------------------SSRRITSAGSNSSRCRADSDQNNKE----------GTQNEAWEEHXXXXXXXXXXXXXADRQSRWDGSSGLIRDKDDATANGPKCAVKTSRAHLERGLGTRAIRAGGEGVGSTTIRDGDPP----IPQHRRSLTRNVGTXXXXXXXXXXXXXXXXXXXXXXAAGSEDDGSDVVG-GRPPPLSAIADDEAEGAANGPFLPLYRNGFGAGGRGRG---SNVCSSGSAGTAPYDSERHRALLTKGGFFVMHGRFGNPQMRFVWMSPDLGTILWRCCGHTAVKGSAKTTLFDFVHLGFHKGALATANKPAAAAAGNAMNQIVLTGGARRNKLVLELDGGNADTDAEVVQTWFEAFNFAVNFANTEVISRMLQSSGRRRSTLTQXXXXXXXXLNSALSVPLAQASSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVTPLRTKFRPLAALRPAPSSLMPPPSAGRRAPVDDASPXXXX----XXXXXXXXXXXXRKHTAWAGSTTSSQGASFVRPPPIDTSNLAGFVGPASPPPRGQ---PARTLSPPLSMGACDADGDADFDREEHMGN-GHRDYTGDGKDVETREKKEVLKSLATKAATAINNRTPTKTNFDLRPRDDLGETSSHLSSKAHASTATGGSAGSSRSRRESESRNKALSLPFRQLIAHHAPSVVSHHAL------------------------------------------------ETPTRRPASPRARVGAVRRGSGCDGL----------GFGDXXXXXXGGA--------------------------------------RWAIGKPLGGTGRRGSGGTDDSDTGKVFADGVRWASSKPAINTRSTTTAPAQPYRERAGSADGRVPIAIASDGQAEESGXXXXXXXXXRSRAEAFTTARSARSL-------QERGGAASPTRGFARATARRLSALGAKAVGGIGLVGTGSS 1861
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: A0A0P1AWJ0_PLAHL (Kinesin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWJ0_PLAHL) HSP 1 Score: 235 bits (600), Expect = 9.830e-60 Identity = 154/422 (36.49%), Postives = 220/422 (52.13%), Query Frame = 2
Query: 167 FARLCPLADGHADNQSIEYEILRDADVDDEEEPEEEILQLSIPE--EHRNTVGGKETVLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQNP------GAHVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRL 1393
+ARL P GH D + + E + D + + I+ P+ E R + ++ V + F V +QE +F V LD V S L GF+GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E P + Y SYLE+Y + VYDLLD S+ D P+EDW VT +DD EG+ + L +FE +EE++LNL F+GN +R+ +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK +G + S EGK IN +L LE V+ +L++ H+PYR S LTSVLR SLG C+ VF+ TL+ + D L ET+++CRF Q C + AV + DA+ RL
Sbjct: 9 YARLRPPRRGH-DCATFDLEKIDDG------QKSKTIIAFPPPDDDEFRMHLKQRDGVEFQFHNVFDPTISQEQIFNEVCLDIVHSALHGFNGTILAYGQTGSGKTYTITGGEHYADRGIIPRTLSTIFEEFEK----RPDMRYSCYISYLEIYNENVYDLLDRSHTDTPIEDWTKVTLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRITSDTPMNQASSRSHSIFSVMIES-------------------RPIDSDVIVTSKLHLVDLAGSERVYKREG-----------TQRMRS---------------------EGKHINLSLHHLEKVILSLRSKRNTASRAQHIPYRNSMLTSVLRGSLGGNCKSVFIATLNYEKDFLDETISTCRFMQRCSEVAVDVAVNTEVDAEKRL 368
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: V9DV94_PHYPR (Kinesin-like protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9DV94_PHYPR) HSP 1 Score: 230 bits (587), Expect = 6.950e-59 Identity = 144/387 (37.21%), Postives = 207/387 (53.49%), Query Frame = 2
Query: 275 ILQLSIPEEHRNTVGGKET--VLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQNPGA------HVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRLE 1396
++ P++ ++ + K+ V + F+ V +QE VF V LD V S L G++GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E P++ Y SYLE+Y + VYDLLD S+ D+P+EDW V +DD EG+ + L +FE +EE++LNL F+GN +RV +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK DG + S EGK IN +L LE V+ +L+ HVPYR S LTSVLR SLG C+ VF+ TL+ + D L E++++CRF Q C + AV + D + RLE
Sbjct: 38 VIAFPPPDDDQSRIHLKQRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEK----RPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIES-------------------RPTDSDLIVTSKLHLVDLAGSERVYKRDG-----------TQRMRS---------------------EGKHINLSLHHLEQVILSLRTKKNAVSRTYHVPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLE 369
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: A0A6G0PCU2_9STRA (Kinesin-like protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PCU2_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.200e-58 Identity = 140/369 (37.94%), Postives = 201/369 (54.47%), Query Frame = 2
Query: 338 YSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQNPGA------HVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRLEPGEEL 1411
+ F+ V +QE VF V LD V S L G++GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E P++ Y SYLE+Y + VYDLLD S+ D+P+E+W + +DD EG+ + L +FE +EE++LNL F+GN +RV +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK DG + S EGK+IN +L LE V+ +L++ H+PYR S LTSVLR SLG C+ VF+ TL+ + D L E++++CRF Q C + AV + D + RLE E+L
Sbjct: 61 FHFNDVFDPSISQEQVFNEVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEK----RPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEEWTKILLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVIIES-------------------RPVDSDMIVTSKLHLVDLAGSERVYKRDG-----------TQRMRS---------------------EGKRINLSLHHLEQVILSLRSKRNTVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLEAVEKL 374
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: H3HBY1_PHYRM (Kinesin-like protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBY1_PHYRM) HSP 1 Score: 230 bits (587), Expect = 2.090e-58 Identity = 139/369 (37.67%), Postives = 200/369 (54.20%), Query Frame = 2
Query: 338 YSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQNP------GAHVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRLEPGEEL 1411
+ F+ V +QE VF V LD V+S L G++GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E P++ Y SYLE+Y + VYDLLD S+ D+P+E+W V +DD EG+ + L +FE +EE++LNL F+GN +RV +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK DG + S EGK IN +L LE V+ +L++ H+PYR S LTSVLR SLG C+ VF+ L+ + D + E++++CRF Q C + AV + D + RLE E+L
Sbjct: 157 FHFNDVFDSSVSQEQVFNEVCLDIVNSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEK----RPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEEWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIES-------------------RPVDSDVIVTSKLHLVDLAGSERVYKRDG-----------TQRMRS---------------------EGKHINLSLHHLEQVILSLRSKRNAVAKAYHIPYRNSMLTSVLRGSLGGNCKSVFIAALNPENDFVDESISTCRFMQRCSEVAVDVAVNSEVDTEKRLEAVEKL 470
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: G4ZHF4_PHYSP (Kinesin-like protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZHF4_PHYSP) HSP 1 Score: 229 bits (583), Expect = 6.430e-58 Identity = 140/369 (37.94%), Postives = 200/369 (54.20%), Query Frame = 2
Query: 338 YSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQNPGA------HVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRLEPGEEL 1411
+ F+ V +QE VF V LD V S L G++GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E P++ Y SYLE+Y + VYDLLD S+ D+P+E+W V +DD EG+ + L +FE +EE++LNL F+GN +RV +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK DG + S EGK IN +L LE V+ +L++ H+PYR S LTSVLR SLG C+ VF+ TL+ + D + E++++CRF Q C + AV + D + RLE E+L
Sbjct: 61 FHFNDVFDPSISQEQVFNEVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEK----RPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEEWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIES-------------------RPVDSDMIVTSKLHLVDLAGSERVYKRDG-----------TQRMRS---------------------EGKHINLSLHHLEQVILSLRSKRNTVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFIDESISTCRFMQRCSEVAVDIAVNSEVDTEKRLEAVEKL 374
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: A0A8K1CHG3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHG3_PYTOL) HSP 1 Score: 228 bits (580), Expect = 9.810e-58 Identity = 139/389 (35.73%), Postives = 208/389 (53.47%), Query Frame = 2
Query: 281 QLSIP----EEHRNTVGGKETVLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENV---MRALQNPGA-----HVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRLE 1396
Q++ P ++ R + ++ V + F+ + +Q+++FQTV LD V+S L G++GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E ++ Y SYLE+Y + VYDLLD S+ D+P+E+W V LDD EG + L ++E +EE++LNL F+GN +RV +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK +G EGK IN +L LE V +RA + A HVPYR S LTSVLR SLG C+ VF+ TL+ + + E++++CRF Q C + A+ + DA+ RL+
Sbjct: 82 QITFPPPDEDDERMHLKQRDAVQFQFNNIFDPSVSQDEIFQTVCLDIVNSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFER----RSNMRYSCFVSYLEIYNESVYDLLDRSHTDRPIEEWTKVLLLDDNEGEMHFRNLGVYEAISEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIEA-------------------RPIDSEVIVTSKLHLVDLAGSERVYKREGT--------------------------------QRMRTEGKHINLSLHHLEQVILSLRASKRNSAVSKTYHVPYRNSMLTSVLRGSLGGNCKSVFIATLNPEVEFADESISTCRFMQRCSEVTVDIAINTEIDAEKRLQ 415
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: A0A024G309_9STRA (Kinesin-like protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G309_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.190e-57 Identity = 141/389 (36.25%), Postives = 212/389 (54.50%), Query Frame = 2
Query: 323 KETVLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQ-----NPGAHVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRKAVC-----QQPDADDRLEPGEELRI-LRREAEGLKAALA 1456
++++ + FD V + +Q+++F T+ D V S L G++ TILAYGQT SGKT+T+TGG+ + ERG+ RAI +F+E+ +P + Y SY+E+Y + VYDLLD S+ + P+E+W V +DD E + L+++E +EE +L L FMGN +R+ ETP N++SSRSHAVF + RS +++ +L VDLAG ER+YK+ REG IN +L LENV+ +L+ AH+PYR S LTSVLR+SLG C+ VF+ TL+ +A+ + E++++CRF Q C + V Q+ DA R+ E+LR L E E L+A ++
Sbjct: 57 RDSLQFPFDNVYGPETSQQEIFDTICNDLVVSVLGGYNATILAYGQTGSGKTYTMTGGDHYRERGILARAISRVFQEIDR----QPRIEYTCYISYMEIYNESVYDLLDSSHANLPIEEWNKVLLMDDDERELHFRNLSVYETKSEEQALKLMFMGNMNRITSETPMNQASSRSHAVFCIMVKA-------------------RSLDSDVLTTSKLHLVDLAGSERVYKHQNS--------------------------------QRMRREGTYINLSLHHLENVIVSLRAQKKTQKAAHIPYRNSMLTSVLRASLGGNCKSVFIATLNPEAEYMDESISTCRFMQRCSEIVVNLMVNQEIDAHKRVVALEKLRTKLEAEREKLRARIS 390
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Match: A0A225WZU4_9STRA (Kinesin-like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZU4_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.250e-57 Identity = 179/556 (32.19%), Postives = 276/556 (49.64%), Query Frame = 2
Query: 155 EVLAFARLCPLADGHADNQSIEYEILRDADVDDEEEPEEEILQLSIPE--EHRNTVGGKETVLYSFDGVLRDDATQEDVFQTVALDTVDSCLRGFSGTILAYGQTNSGKTWTVTGGEGFEERGLAPRAIGHLFREMRNAETSEPSVSYEVRASYLEVYEDRVYDLLDVSNRDKPVEDWATVTPLDDGEGNQVLKGLTMFEVDTEEDSLNLFFMGNSHRVMGETPANRSSSRSHAVFTLTXXXXXXXXXXXXXXXXXXXXXXRSETRTIVSQCELTFVDLAGCERMYKNDGQGYSVGLDDAAAVDLLSATGGDASELEAHGARKAAREREGKKINFALQKLENVMRALQNP------GAHVPYRESTLTSVLRSSLGRECRPVFVVTLSVDADDLAETVASCRFAQSCRK-----AVCQQPDADDRLEPGEELRI--------LRREAEGLKAALATKDDLLGKLAEE-----ITEKDGDLVAVTERLEALEAAHVFHTTRSPSEEDKGACAVLAQALADGSDEAEEALEELDRVSALQCC---RKLQEIVVVEVKQ 1735
++ +ARL P GH D+ + E E + D + ++ P+ E R + ++ + + F+ V +QE VF V L + L G++GTILAYGQT SGKT+T+TGGE + +RG+ PR + +F E +P++ Y SYLE+Y + VYDLLD S+ D+P+E+W V +DD EG+ + L +FE +EE++LNL F+GN +RV +TP N++SSRSH++F++ R ++ +L VDLAG ER+YK DG + S EGK IN +L LE V+ +L+N H+PYR S LTSVLR SLG C+ VF+ TL+ + D + E++++CRF Q C + AV + D + RL+ E+L L++ A L+ L T+D K ++ I ++ VA++ A E A+ T ++ + D C + + L D EELD+ S+ C R L E V E+++
Sbjct: 5 QIGTYARLRPARRGH-DSANFELERVDDGRFN------RTVIAFPPPDDVESRINLKQRDGLDFHFNDVFASSISQEQVFNEVCLAS-SYALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEK----KPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEEWTKVVLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIES-------------------RPTDSDMIVTSKLHLVDLAGSERVYKRDG-----------TQRMRS---------------------EGKHINLSLHHLEQVILSLRNKKNTVSKAYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFVDESISTCRFMQRCSEVSVDIAVNTEVDIEKRLDAVEKLNAELETTNSDLQQRAVQLQNDLKTQDLHFAKQEQQWERRLIQAQEETQVALSAAKNAREKAN--QTVQTGKKVDWMQCEEIVERLLITGDLPR---EELDKTSSTDECEEARLLYEAVAQEIRE 492 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig86.16218.1 >prot_C-linearis_contig86.16218.1 ID=prot_C-linearis_contig86.16218.1|Name=mRNA_C-linearis_contig86.16218.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1816bp MSSSSVPPADALEVLAFARLCPLADGHADNQSIEYEILRDADVDDEEEPEback to top mRNA from alignment at C-linearis_contig86:256384..268075+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig86.16218.1 ID=mRNA_C-linearis_contig86.16218.1|Name=mRNA_C-linearis_contig86.16218.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11692bp|location=Sequence derived from alignment at C-linearis_contig86:256384..268075+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig86:256384..268075+ >mRNA_C-linearis_contig86.16218.1 ID=mRNA_C-linearis_contig86.16218.1|Name=mRNA_C-linearis_contig86.16218.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=10896bp|location=Sequence derived from alignment at C-linearis_contig86:256384..268075+ (Chordaria linearis ClinC8C monoicous)back to top |