mRNA_C-linearis_contig85.16180.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig85.16180.1
Unique NamemRNA_C-linearis_contig85.16180.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D8LP53_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP53_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 5.460e-128
Identity = 253/485 (52.16%), Postives = 310/485 (63.92%), Query Frame = 2
Query:   56 CGPGSMQNTL-KQLERARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFG-----DTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDP--ATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGVDASDE--DSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAML--RERRKTKKEGCKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
              PGSM NTL K+L+ AR D GYSPLH+AS+DGR EDV  LL+SS+GK  D+FQGGGKTALMLAAREGH  VARELLNHGA I+KKS  CE+                         +  D   E+ L  +A+GGHLRVV  LV  G+ +  ++V  LR GVEEGF  AF  +L GNL   + G     ++R  FLQ  L  +AE GNL V++ALS + V+LDGT+ +   +H D  P  ATALH AA + GHNDVV +LL N VRID V+G+  TPL+ +V  NH  V+ATLL+AGA  S+     G  ++   A   SSVDMA  LLR+GA V+       SS LH A  N D N EA+ DLLLRWGADET++DS G TPM    +      D  ++ + + K+ VR+LL NAPADR WRRRGWL ML  RERRKT+K+GCKVAR E       EG IVLGG+A WLLAV +EGV RTV+GFL
Sbjct:    2 AAPGSMNNTLAKKLKWARTDLGYSPLHIASEDGRTEDVVNLLVSSEGKGTDDFQGGGKTALMLAAREGHAHVARELLNHGADINKKSVKCEKXXXXXXXXXXXXXXXXXXXXXXXXXETWDSTSESALLLSAKGGHLRVVNTLVLRGASVCCDTVGLLRCGVEEGFHEAFNNVLDGNL---QDGLPDGYESRGHFLQTALLKAAESGNLPVVKALSTKGVDLDGTAEYH-PSHSDIIPGQATALHAAA-FGGHNDVVNFLLENSVRIDAVDGNMMTPLICSVSENHLCVSATLLEAGAAASAED-QTGTSSLSYAAASSSSVDMALLLLRYGADVNTRCYLFGSSVLHNACTNRD-NTEALVDLLLRWGADETVVDSSGRTPMNHLTE------DRFTRHSAETKDKVRKLLVNAPADRTWRRRGWLVMLCERERRKTEKKGCKVARTE-------EG-IVLGGMAAWLLAVTDEGVLRTVVGFL 465          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K)

HSP 1 Score: 358 bits (918), Expect = 5.100e-115
Identity = 243/495 (49.09%), Postives = 290/495 (58.59%), Query Frame = 2
Query:   38 FFFPKPC-----GPGSMQNTLKQLERARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQ-TALHFAAGFGHNEVVDILVMLGADRDARDEKHET----PLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDP--ATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGVDASDE--DSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAML--RERRKTKKEGCKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
            FFF   C      P SMQNTL++LE ARIDAGYSPLHVAS+DGR EDV  +L+SS+GK  D+FQGGGKTALMLAAREGH  VARELL HGA IDK+S  C++ T                        D +     T                           +  +++ RLRFG EE F  AF  +  GN+       +  +FLQ  L  +AE GNL V++ALS + V+LDGT+ +   +H D  P  ATALH AA   GHNDVV YLL N VRIDP + +  TPLM +   NH  V+ATLL+AGA+ S+        + L       SVDMA  LLR+GA V+AS     SSALH A+ N D N EAM DLLLRWGADET++D  G TP+ VF      Q       T + KE VR+LL NAPADR WRRRGWL ML  RERRKT KEGCK+AR         E DIV+GGVATWL AV +EGV RTV+ FL
Sbjct:   50 FFFVSCCFQGSGNPVSMQNTLQKLEWARIDAGYSPLHVASEDGRTEDVVNMLVSSEGKGTDDFQGGGKTALMLAAREGHAHVARELLKHGADIDKRSDKCKRKTXXXXXXXXXXXXXXXXXXXXXXXXDCQMGDRSTGRXXXXXXXXXXXXXXXXXXXXXXXXIVYPDTIGRLRFGTEEEFRAAFNKVFDGNI--ESGHKSHGDFLQSALLYAAEYGNLPVVKALSTKGVDLDGTAEYY-PSHSDIVPGQATALHAAA-SGGHNDVVNYLLDNSVRIDPDDKNMMTPLMWSAMKNHLCVSATLLEAGANASAEDQMGE--SSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKNRD-NTEAMVDLLLRWGADETVVDDRGRTPLDVFTSGTRFQ------RTAETKERVRKLLVNAPADRTWRRRGWLVMLWERERRKTVKEGCKLAR--------TEEDIVVGGVATWLFAVTDEGVLRTVVAFL 523          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 7.990e-27
Identity = 131/399 (32.83%), Postives = 185/399 (46.37%), Query Frame = 2
Query:  329 TALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVC-KNHLDHDPATALHVAAWYVGHNDVVKYLLANG-VRIDPVNGDGGTPLMHAVEWNHPL-VAATLLDAGADTSSRSPHDGVWNMLEQAIVHS-----SVDMARPLLRHGAGVDASDE-DSSALHVAMVNCD-TNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRERRKTKKEG-------CKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
            T L FAA  G+N +V  L+    D+D +D+   TPL KAAE GH+ V++ L+  G+      +      +     G +  ++   L      D+     +  L  ++  G+L V++ L   D ++   +  +  +++   D  TALH A    GH  VV  LL+ G + ID V+ DG T L  AV     L +  TLL AGAD   R    GV +   +   HS     +  + + L+ HGA V++     S+ LH A   CD +  +A+  LLL+ GADE  L+ +G TP                        GVR+LL    ADR WRRRGWL MLR R  T K G        + A++ G   GG E    L     WL  V EEGVFR V+ FL
Sbjct:   56 TTLGFAASEGNNHMVRCLLRW-KDKDEQDQFGYTPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFAT-AGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHA---CDYSQSDAVLRLLLQAGADENALNDDGDTP------------------------GVRELL----ADRAWRRRGWLVMLRLR--TLKAGGDGGAAGARSAKQRGGSGGGEE-SFNLSEAVEWL-GVVEEGVFRNVVSFL 417          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.320e-22
Identity = 123/426 (28.87%), Postives = 184/426 (43.19%), Query Frame = 2
Query:  116 GYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQ-GGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEAL--SGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRS-PHDGVWNMLEQAIVHSSVDMARPLLRHGAGV-DASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFD------------------KRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRER 1324
            G + L  A+  G  + V  LL S    D +       ++AL +A+  GH   A++L+  GA +++        +LH A    H ++VD+L++ GA  ++R     TPL  AA  G+ RVV  L+  G+ +        R GV                                L +++E G+   +EAL  +G D+NL             H   TA+ VA    GH  V++ ++ NG  +   +  G T L HA           LLDAGAD ++++ P    +  L   ++ +S +    LL+ G  V D +    SALH+   +    ++ M DLLLRWGA ET ++  GLTP  +                    + +         LT KE +  R LL  APADR WRRR WL MLR R
Sbjct:   69 GRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLL--GNAMTDVDALDSR-GVSP------------------------------LMVASEGGHCSTVEALLRAGADMNLRHAGG-------AHLGMTAMDVAV-SKGHVGVIEAIVENGGNVRATDTYGLTALHHA---RGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLT-KEIQRARVLLARAPADRTWRRRCWLVMLRAR 449          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.690e-20
Identity = 127/455 (27.91%), Postives = 193/455 (42.42%), Query Frame = 2
Query:  221 GKTALMLAAREGHPRVARELLNHGAKIDKK--SANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHET-PLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGV-DASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKE---KEGVRQLLRNAPADRRWRRRGWLAMLRER------------RKTKKEGC------------------KVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
            G++ L  AA  G+  V   LL  G   D    +++  ++AL+ +    H      L++ GAD +  D   +  PL  A + G   +V NL+  G+      + R  FG       A +  LA          + ++        +  +  +KV+ A +G D ++            D D  +AL  AA Y    DV+K LL +GV ++ V  D   PL  A ++N       LLDAGAD   +         L  A    + +    LLR GA V   +D+ S+ALH+         +   D+LLR GA E  +D  G  P+ +F KR+  +      + + E    E   +LL  APADR WRRR WL MLRER            RK KK G                   +  R  G   G    ++ L G+ + L+ +  +GVFRT++G++
Sbjct:   67 GRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGA--NPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDK--------NGHVATVKVLLA-AGADTDI-----------RDLDSHSALVFAAQYE-RIDVMKALLEHGVDVN-VGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLF-KRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.910e-18
Identity = 117/421 (27.79%), Postives = 176/421 (41.81%), Query Frame = 2
Query:  290 GAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHE-TPLTKAAEGGHLRVVKNLVRVGS---FIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRK-FGDTREEFLQYTLCMSAELGNLKVIEAL--SGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAAT--LLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGV----DASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRERRKTKKEGCKVARKEGAESG-----------GVEGDIV--LGGVATWLLAVAEEGVFRTVMGFL 1474
            GA ++K + +  ++AL+ A   GH      L++ G+D + RD   + + L++A +G H + V +L+  G+     +   +A L+       +G    LL          G T  E     L ++   G+L ++E L  +G D +L     +            +                       +D  +  G T L  A+ ++     A   L+ A ADT  +S   G W  L  A  H  V+    LL++ A V    DA+ +  + LH A V     + A  DLLLRWGADET  +  G TP+ V    +     D    +  E +  R LL  AP DRRWRRRGWL +LR R       C    K  ++SG           G   D+     GV   L  +  E VFR+V+GFL
Sbjct:   94 GADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYET---PLMLAVRRGHLAIVETLLEAGADCSLRQLEDY------------SXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKSV--GGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGD--TPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDV----LGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRTIVVAHRC---AKGASDSGLSLCQARRNGKGARIDVAGNSSGVVELLTELEPEAVFRSVLGFL 488          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D8LP48_ECTSI (EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 4.710e-18
Identity = 129/485 (26.60%), Postives = 190/485 (39.18%), Query Frame = 2
Query:  128 LHVASDDGRHEDVRELLMSSKGK-DRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDAR---------DEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHE-----------SVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEAL--SGEDVN---LDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAAT----LLDAGADTSSRSPHDGVWNMLEQAIVHSSV-----DMARPLLRHGAGVD-ASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRERRKTKKEGCKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
            LH AS+ G    VR L+ S+ G+   +  Q  G+T L LA+REGH  V  EL+  GA ++ +S N                          + DA              +TPL +A E GH  VV+ L+  G+    +           S+  + F    G +     LL+        GD    FL++T+ ++   G+  V++ L  +G DV     D     +C                                              ++A        +AT    +++A  D+ +    + +  +L   +  +S      D    LL+ GA V+  S    + LH  M N  + + ++ DLLLRWGADETM D  G TP     +        +  L     E VR LL NAP DR WRRRGWL MLR    T   G  V   E  + GG  G   L     ++L++ E+ VFR V+ FL
Sbjct:    9 LHSASEYGDVWKVRTLVKSADGRLALNSVQDAGRTPLQLASREGHVLVVEELVAAGADVNFRSPNDGXXXXXXXXXXXXXXXXXXXXXXXXEEDAGRGLSSTWTVGANLKTPLVEAIENGHFPVVQTLLSKGADATLDVGCSMRDLGDMSLRPIDFAALRGDNDIMTALLSDI-----DGDC---FLEFTIILACRRGHFAVVKTLLDNGCDVKTSQFDFDQPLICAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNAGAEREYDYSATKTKAVMEAILDSGAEPDEEELGYLLSVGVCKTSTLENMYDARLMLLQRGAPVNFCSYGGQTPLHHIM-NRGSCVPSVVDLLLRWGADETMKDERGKTPADYLGR--------IRNLDPAVAERVRHLLVNAPKDRAWRRRGWLVMLRAH--TLAAGEPVDIPEPKKRGGGGGVCPL----KFVLSLNEDAVFREVVAFL 470          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: UPI001EE553A4 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE553A4)

HSP 1 Score: 95.9 bits (237), Expect = 2.590e-17
Identity = 99/361 (27.42%), Postives = 159/361 (44.04%), Query Frame = 2
Query:  101 ARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGD--TREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHN-DVVKYLLA-NGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHG-AGVDASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLT 1168
            +R   G++P+ +A+D GR E V +LL+  +  D       G T L +A+ +GH +  R +L+        + +C +TA+  AA FGH +V D+LV  G+D    D      L  A  GGH+ +VK +++ G                                   FGD  +R    +  + ++A  G+++V E L G++  L            D +    LH A   VG+N ++V  +L  N V ID  +GDG TP+M A E+ H  +   L+D   DT          N+L  +     VD+ + +L  G   VD+  ++   +   M+        + DLLL  G D + LD +G T
Sbjct:  221 SRGKCGWTPVMIAADGGRQELV-DLLVRQRC-DLSLTDDDGNTILHVASIKGHWKTVRYILSKKTVDVNITGHCNRTAVMAAARFGHRKVFDLLVKNGSDLSTVDSDENNILHIACIGGHVEIVKYILKNG-----------------------------------FGDINSRGHNRRTPVMLAANSGHIQVFELLVGKECLL---------RTKDRNGTGILHFAC--VGNNVEIVDGILKRNIVSIDSKDGDGKTPVMLAAEFGHTDMFTFLVDNQCDTQVVCEKGN--NVLHTSCALGHVDIVKCILTQGPVNVDSCGQNQ--MTPVMLAAKNGHRDIFDLLLNNGCDTSQLDKDGNT 529          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 7.740e-17
Identity = 84/245 (34.29%), Postives = 125/245 (51.02%), Query Frame = 2
Query:  827 RIDPVNGDGGTPLMHAVEWNHPL----VAATLLDAGADTSSRSPHDGV-WNMLEQAIVH--SSVDMARPLLRHGAGVDA-SDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTP---MAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLR----------ERRKTKKEGC--KVARKEGAESGGVEGD------IVLGGVATWLLAVAEEGVFRTVMGFL 1474
             +D  +  G T +  AV  + PL    V   LL+AG   ++ +  D + W  L  A+    +S+D    LL  GA  +A  D   + LHVA ++  +N+ A+ +LLLRWGADET  +  G  P   + V+D R DV  +DV      + + +R++L  APADR WRRRGWL + R          +  +  +  C  KVAR  G + GG E +      +  GG+   LL +  +G+FR V+GFL
Sbjct:  268 EVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMH--SNVAAV-ELLLRWGADETCSNDNGDVPADVIGVYD-RGDVNDEDVKA----DHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504          
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: A0A6H5JIG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG3_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.480e-16
Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 2
Query:  134 VASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAG 580
            V  +DGR EDV ELL+S++GK  D+FQGGGKTALML AREGH  V  ELLNHGA+I+K    C                           ++   + +  L                  G+ +    V RL +GVEEGF      LL G
Sbjct:    7 VDLEDGRAEDVVELLVSNEGKGTDDFQGGGKTALMLTAREGHKSVVCELLNHGAEINKNGEKCXXXXXXXXXXXXXXXXXXXXXXXXXXLESPHSRLKGALXXXXXXXXXXXXXXXXLGGATVSCGYVGRLLYGVEEGFGATLDNLLGG 155          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP53_ECTSI5.460e-12852.16EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Q8QNP0_ESV1K5.100e-11549.09EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D7FVI9_ECTSI7.990e-2732.83Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K1F4_9PHAE1.320e-2228.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI6.690e-2027.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLL7_ECTSI2.910e-1827.79Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LP48_ECTSI4.710e-1826.60EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI[more]
UPI001EE553A42.590e-1727.42serine/threonine-protein phosphatase 6 regulatory ... [more]
D8LB27_ECTSI7.740e-1734.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIG3_9PHAE2.480e-1636.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:691840..693316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.0
Seed ortholog evalue2.6e-104
Seed eggNOG ortholog2880.D8LP53
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1477
Cds size1407
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930648.6801558-UTR-C-linearis_contig85:691839..6919091622930648.6801558-UTR-C-linearis_contig85:691839..691909Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 691840..691909 +
1690881177.870152-UTR-C-linearis_contig85:691839..6919091690881177.870152-UTR-C-linearis_contig85:691839..691909Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 691840..691909 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930648.6995583-CDS-C-linearis_contig85:691909..6933161622930648.6995583-CDS-C-linearis_contig85:691909..693316Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 691910..693316 +
1690881177.8852537-CDS-C-linearis_contig85:691909..6933161690881177.8852537-CDS-C-linearis_contig85:691909..693316Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 691910..693316 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16180.1prot_C-linearis_contig85.16180.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig85 691910..693316 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig85.16180.1

>prot_C-linearis_contig85.16180.1 ID=prot_C-linearis_contig85.16180.1|Name=mRNA_C-linearis_contig85.16180.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=469bp
MQNTLKQLERARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGG
GKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEV
VDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVA
RLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKV
IEALSGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLAN
GVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNML
EQAIVHSSVDMARPLLRHGAGVDASDEDSSALHVAMVNCDTNIEAMTDLL
LRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNA
PADRRWRRRGWLAMLRERRKTKKEGCKVARKEGAESGGVEGDIVLGGVAT
WLLAVAEEGVFRTVMGFL*
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mRNA from alignment at C-linearis_contig85:691840..693316+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig85.16180.1 ID=mRNA_C-linearis_contig85.16180.1|Name=mRNA_C-linearis_contig85.16180.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1477bp|location=Sequence derived from alignment at C-linearis_contig85:691840..693316+ (Chordaria linearis ClinC8C monoicous)
ATGACCATTTCCAATTTTTGTTCATTTTTCTTTCTGGTTCTTTTTCCCTA AGCCGTGTGGACCAGGGTCCATGCAGAACACACTGAAACAGCTCGAGAGG GCGCGAATCGATGCCGGATACTCTCCTCTTCACGTAGCTTCGGATGACGG GCGACACGAGGACGTGCGGGAGCTATTGATGTCGAGCAAGGGAAAGGATA GGGATGAGTTCCAGGGTGGGGGGAAAACAGCGCTGATGCTTGCAGCCCGC GAAGGCCATCCACGTGTCGCCCGAGAGCTGCTGAACCATGGCGCCAAAAT CGACAAAAAAAGCGCCAATTGCGAACAGACTGCTCTCCATTTTGCTGCCG GCTTTGGGCACAACGAGGTAGTGGATATTCTCGTGATGCTCGGTGCGGAC AGAGATGCTCGTGACGAAAAGCATGAAACCCCGCTGACGAAGGCAGCCGA AGGAGGACATCTGCGTGTCGTGAAGAACCTGGTCAGGGTTGGCAGTTTTA TTGAACACGAGTCTGTCGCACGCCTCCGTTTTGGCGTAGAAGAGGGGTTT GATGGAGCGTTTCAGGTCCTCTTGGCAGGGAACTTGTGTTGCAGAAAGTT CGGTGATACGCGTGAAGAATTTCTACAATACACCCTGTGCATGTCAGCAG AACTCGGCAATCTCAAAGTTATCGAGGCCTTGTCGGGCGAGGACGTCAAT CTCGACGGTACGTCTTCGTGGGTGTGTAAGAACCACCTGGATCATGATCC GGCGACTGCTCTACATGTTGCTGCATGGTACGTAGGACACAACGATGTGG TAAAGTATCTTCTGGCGAACGGGGTTCGTATCGACCCAGTGAACGGTGAC GGGGGTACACCACTGATGCATGCCGTGGAGTGGAATCACCCGCTTGTCGC AGCTACCCTCCTGGACGCCGGGGCCGACACCAGCAGCCGTAGCCCTCACG ACGGCGTTTGGAACATGCTTGAACAAGCCATCGTACACAGCTCGGTTGAC ATGGCGCGGCCTCTCCTCCGCCACGGGGCAGGCGTCGATGCTAGCGACGA AGACTCGTCCGCCCTGCACGTGGCGATGGTGAACTGTGACACGAACATTG AAGCGATGACGGATCTTCTACTACGGTGGGGCGCGGATGAAACGATGCTG GACAGCGAAGGACTAACTCCCATGGCTGTCTTCGATAAACGCATTGACGT GCAAATCGATGATGTCTCCCAACTGACGGAAAAGGAAAAAGAGGGCGTGC GCCAGCTTCTGCGCAACGCCCCCGCCGACAGGAGGTGGCGTCGCCGGGGC TGGCTGGCGATGCTTCGTGAGCGTCGCAAGACAAAGAAGGAAGGTTGCAA GGTGGCGAGGAAGGAGGGGGCGGAGAGCGGTGGTGTCGAAGGAGACATCG TGTTGGGCGGCGTGGCGACGTGGCTACTTGCAGTTGCGGAGGAGGGAGTG TTCCGCACGGTGATGGGCTTTCTATAA
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Coding sequence (CDS) from alignment at C-linearis_contig85:691840..693316+

>mRNA_C-linearis_contig85.16180.1 ID=mRNA_C-linearis_contig85.16180.1|Name=mRNA_C-linearis_contig85.16180.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2814bp|location=Sequence derived from alignment at C-linearis_contig85:691840..693316+ (Chordaria linearis ClinC8C monoicous)
ATGCAGAACACACTGAAACAGCTCGAGAGGGCGCGAATCGATGCCGGATA
CTCTCCTCTTCACGTAGCTTCGGATGACGGGCGACACGAGGACGTGCGGG
AGCTATTGATGTCGAGCAAGGGAAAGGATAGGGATGAGTTCCAGGGTGGG
GGGAAAACAGCGCTGATGCTTGCAGCCCGCGAAGGCCATCCACGTGTCGC
CCGAGAGCTGCTGAACCATGGCGCCAAAATCGACAAAAAAAGCGCCAATT
GCGAACAGACTGCTCTCCATTTTGCTGCCGGCTTTGGGCACAACGAGGTA
GTGGATATTCTCGTGATGCTCGGTGCGGACAGAGATGCTCGTGACGAAAA
GCATGAAACCCCGCTGACGAAGGCAGCCGAAGGAGGACATCTGCGTGTCG
TGAAGAACCTGGTCAGGGTTGGCAGTTTTATTGAACACGAGTCTGTCGCA
CGCCTCCGTTTTGGCGTAGAAGAGGGGTTTGATGGAGCGTTTCAGGTCCT
CTTGGCAGGGAACTTGTGTTGCAGAAAGTTCGGTGATACGCGTGAAGAAT
TTCTACAATACACCCTGTGCATGTCAGCAGAACTCGGCAATCTCAAAGTT
ATCGAGGCCTTGTCGGGCGAGGACGTCAATCTCGACGGTACGTCTTCGTG
GGTGTGTAAGAACCACCTGGATCATGATCCGGCGACTGCTCTACATGTTG
CTGCATGGTACGTAGGACACAACGATGTGGTAAAGTATCTTCTGGCGAAC
GGGGTTCGTATCGACCCAGTGAACGGTGACGGGGGTACACCACTGATGCA
TGCCGTGGAGTGGAATCACCCGCTTGTCGCAGCTACCCTCCTGGACGCCG
GGGCCGACACCAGCAGCCGTAGCCCTCACGACGGCGTTTGGAACATGCTT
GAACAAGCCATCGTACACAGCTCGGTTGACATGGCGCGGCCTCTCCTCCG
CCACGGGGCAGGCGTCGATGCTAGCGACGAAGACTCGTCCGCCCTGCACG
TGGCGATGGTGAACTGTGACACGAACATTGAAGCGATGACGGATCTTCTA
CTACGGTGGGGCGCGGATGAAACGATGCTGGACAGCGAAGGACTAACTCC
CATGGCTGTCTTCGATAAACGCATTGACGTGCAAATCGATGATGTCTCCC
AACTGACGGAAAAGGAAAAAGAGGGCGTGCGCCAGCTTCTGCGCAACGCC
CCCGCCGACAGGAGGTGGCGTCGCCGGGGCTGGCTGGCGATGCTTCGTGA
GCGTCGCAAGACAAAGAAGGAAGGTTGCAAGGTGGCGAGGAAGGAGGGGG
CGGAGAGCGGTGGTGTCGAAGGAGACATCGTGTTGGGCGGCGTGGCGACG
TGGCTACTTGCAGTTGCGGAGGAGGGAGTGTTCCGCACGGTGATGGGCTT
TCTATAAATGCAGAACACACTGAAACAGCTCGAGAGGGCGCGAATCGATG
CCGGATACTCTCCTCTTCACGTAGCTTCGGATGACGGGCGACACGAGGAC
GTGCGGGAGCTATTGATGTCGAGCAAGGGAAAGGATAGGGATGAGTTCCA
GGGTGGGGGGAAAACAGCGCTGATGCTTGCAGCCCGCGAAGGCCATCCAC
GTGTCGCCCGAGAGCTGCTGAACCATGGCGCCAAAATCGACAAAAAAAGC
GCCAATTGCGAACAGACTGCTCTCCATTTTGCTGCCGGCTTTGGGCACAA
CGAGGTAGTGGATATTCTCGTGATGCTCGGTGCGGACAGAGATGCTCGTG
ACGAAAAGCATGAAACCCCGCTGACGAAGGCAGCCGAAGGAGGACATCTG
CGTGTCGTGAAGAACCTGGTCAGGGTTGGCAGTTTTATTGAACACGAGTC
TGTCGCACGCCTCCGTTTTGGCGTAGAAGAGGGGTTTGATGGAGCGTTTC
AGGTCCTCTTGGCAGGGAACTTGTGTTGCAGAAAGTTCGGTGATACGCGT
GAAGAATTTCTACAATACACCCTGTGCATGTCAGCAGAACTCGGCAATCT
CAAAGTTATCGAGGCCTTGTCGGGCGAGGACGTCAATCTCGACGGTACGT
CTTCGTGGGTGTGTAAGAACCACCTGGATCATGATCCGGCGACTGCTCTA
CATGTTGCTGCATGGTACGTAGGACACAACGATGTGGTAAAGTATCTTCT
GGCGAACGGGGTTCGTATCGACCCAGTGAACGGTGACGGGGGTACACCAC
TGATGCATGCCGTGGAGTGGAATCACCCGCTTGTCGCAGCTACCCTCCTG
GACGCCGGGGCCGACACCAGCAGCCGTAGCCCTCACGACGGCGTTTGGAA
CATGCTTGAACAAGCCATCGTACACAGCTCGGTTGACATGGCGCGGCCTC
TCCTCCGCCACGGGGCAGGCGTCGATGCTAGCGACGAAGACTCGTCCGCC
CTGCACGTGGCGATGGTGAACTGTGACACGAACATTGAAGCGATGACGGA
TCTTCTACTACGGTGGGGCGCGGATGAAACGATGCTGGACAGCGAAGGAC
TAACTCCCATGGCTGTCTTCGATAAACGCATTGACGTGCAAATCGATGAT
GTCTCCCAACTGACGGAAAAGGAAAAAGAGGGCGTGCGCCAGCTTCTGCG
CAACGCCCCCGCCGACAGGAGGTGGCGTCGCCGGGGCTGGCTGGCGATGC
TTCGTGAGCGTCGCAAGACAAAGAAGGAAGGTTGCAAGGTGGCGAGGAAG
GAGGGGGCGGAGAGCGGTGGTGTCGAAGGAGACATCGTGTTGGGCGGCGT
GGCGACGTGGCTACTTGCAGTTGCGGAGGAGGGAGTGTTCCGCACGGTGA
TGGGCTTTCTATAA
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