mRNA_C-linearis_contig85.16180.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D8LP53_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP53_ECTSI) HSP 1 Score: 389 bits (999), Expect = 5.460e-128 Identity = 253/485 (52.16%), Postives = 310/485 (63.92%), Query Frame = 2
Query: 56 CGPGSMQNTL-KQLERARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFG-----DTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDP--ATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGVDASDE--DSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAML--RERRKTKKEGCKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
PGSM NTL K+L+ AR D GYSPLH+AS+DGR EDV LL+SS+GK D+FQGGGKTALMLAAREGH VARELLNHGA I+KKS CE+ + D E+ L +A+GGHLRVV LV G+ + ++V LR GVEEGF AF +L GNL + G ++R FLQ L +AE GNL V++ALS + V+LDGT+ + +H D P ATALH AA + GHNDVV +LL N VRID V+G+ TPL+ +V NH V+ATLL+AGA S+ G ++ A SSVDMA LLR+GA V+ SS LH A N D N EA+ DLLLRWGADET++DS G TPM + D ++ + + K+ VR+LL NAPADR WRRRGWL ML RERRKT+K+GCKVAR E EG IVLGG+A WLLAV +EGV RTV+GFL
Sbjct: 2 AAPGSMNNTLAKKLKWARTDLGYSPLHIASEDGRTEDVVNLLVSSEGKGTDDFQGGGKTALMLAAREGHAHVARELLNHGADINKKSVKCEKXXXXXXXXXXXXXXXXXXXXXXXXXETWDSTSESALLLSAKGGHLRVVNTLVLRGASVCCDTVGLLRCGVEEGFHEAFNNVLDGNL---QDGLPDGYESRGHFLQTALLKAAESGNLPVVKALSTKGVDLDGTAEYH-PSHSDIIPGQATALHAAA-FGGHNDVVNFLLENSVRIDAVDGNMMTPLICSVSENHLCVSATLLEAGAAASAED-QTGTSSLSYAAASSSSVDMALLLLRYGADVNTRCYLFGSSVLHNACTNRD-NTEALVDLLLRWGADETVVDSSGRTPMNHLTE------DRFTRHSAETKDKVRKLLVNAPADRTWRRRGWLVMLCERERRKTEKKGCKVARTE-------EG-IVLGGMAAWLLAVTDEGVLRTVVGFL 465
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K) HSP 1 Score: 358 bits (918), Expect = 5.100e-115 Identity = 243/495 (49.09%), Postives = 290/495 (58.59%), Query Frame = 2
Query: 38 FFFPKPC-----GPGSMQNTLKQLERARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQ-TALHFAAGFGHNEVVDILVMLGADRDARDEKHET----PLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDP--ATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGVDASDE--DSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAML--RERRKTKKEGCKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
FFF C P SMQNTL++LE ARIDAGYSPLHVAS+DGR EDV +L+SS+GK D+FQGGGKTALMLAAREGH VARELL HGA IDK+S C++ T D + T + +++ RLRFG EE F AF + GN+ + +FLQ L +AE GNL V++ALS + V+LDGT+ + +H D P ATALH AA GHNDVV YLL N VRIDP + + TPLM + NH V+ATLL+AGA+ S+ + L SVDMA LLR+GA V+AS SSALH A+ N D N EAM DLLLRWGADET++D G TP+ VF Q T + KE VR+LL NAPADR WRRRGWL ML RERRKT KEGCK+AR E DIV+GGVATWL AV +EGV RTV+ FL
Sbjct: 50 FFFVSCCFQGSGNPVSMQNTLQKLEWARIDAGYSPLHVASEDGRTEDVVNMLVSSEGKGTDDFQGGGKTALMLAAREGHAHVARELLKHGADIDKRSDKCKRKTXXXXXXXXXXXXXXXXXXXXXXXXDCQMGDRSTGRXXXXXXXXXXXXXXXXXXXXXXXXIVYPDTIGRLRFGTEEEFRAAFNKVFDGNI--ESGHKSHGDFLQSALLYAAEYGNLPVVKALSTKGVDLDGTAEYY-PSHSDIVPGQATALHAAA-SGGHNDVVNYLLDNSVRIDPDDKNMMTPLMWSAMKNHLCVSATLLEAGANASAEDQMGE--SSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKNRD-NTEAMVDLLLRWGADETVVDDRGRTPLDVFTSGTRFQ------RTAETKERVRKLLVNAPADRTWRRRGWLVMLWERERRKTVKEGCKLAR--------TEEDIVVGGVATWLFAVTDEGVLRTVVAFL 523
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 122 bits (306), Expect = 7.990e-27 Identity = 131/399 (32.83%), Postives = 185/399 (46.37%), Query Frame = 2
Query: 329 TALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVC-KNHLDHDPATALHVAAWYVGHNDVVKYLLANG-VRIDPVNGDGGTPLMHAVEWNHPL-VAATLLDAGADTSSRSPHDGVWNMLEQAIVHS-----SVDMARPLLRHGAGVDASDE-DSSALHVAMVNCD-TNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRERRKTKKEG-------CKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
T L FAA G+N +V L+ D+D +D+ TPL KAAE GH+ V++ L+ G+ + + G + ++ L D+ + L ++ G+L V++ L D ++ + + +++ D TALH A GH VV LL+ G + ID V+ DG T L AV L + TLL AGAD R GV + + HS + + + L+ HGA V++ S+ LH A CD + +A+ LLL+ GADE L+ +G TP GVR+LL ADR WRRRGWL MLR R T K G + A++ G GG E L WL V EEGVFR V+ FL
Sbjct: 56 TTLGFAASEGNNHMVRCLLRW-KDKDEQDQFGYTPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFAT-AGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHA---CDYSQSDAVLRLLLQAGADENALNDDGDTP------------------------GVRELL----ADRAWRRRGWLVMLRLR--TLKAGGDGGAAGARSAKQRGGSGGGEE-SFNLSEAVEWL-GVVEEGVFRNVVSFL 417
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.320e-22 Identity = 123/426 (28.87%), Postives = 184/426 (43.19%), Query Frame = 2
Query: 116 GYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQ-GGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEAL--SGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRS-PHDGVWNMLEQAIVHSSVDMARPLLRHGAGV-DASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFD------------------KRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRER 1324
G + L A+ G + V LL S D + ++AL +A+ GH A++L+ GA +++ +LH A H ++VD+L++ GA ++R TPL AA G+ RVV L+ G+ + R GV L +++E G+ +EAL +G D+NL H TA+ VA GH V++ ++ NG + + G T L HA LLDAGAD ++++ P + L ++ +S + LL+ G V D + SALH+ + ++ M DLLLRWGA ET ++ GLTP + + + LT KE + R LL APADR WRRR WL MLR R
Sbjct: 69 GRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLL--GNAMTDVDALDSR-GVSP------------------------------LMVASEGGHCSTVEALLRAGADMNLRHAGG-------AHLGMTAMDVAV-SKGHVGVIEAIVENGGNVRATDTYGLTALHHA---RGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLT-KEIQRARVLLARAPADRTWRRRCWLVMLRAR 449
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 103 bits (256), Expect = 6.690e-20 Identity = 127/455 (27.91%), Postives = 193/455 (42.42%), Query Frame = 2
Query: 221 GKTALMLAAREGHPRVARELLNHGAKIDKK--SANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHET-PLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGV-DASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKE---KEGVRQLLRNAPADRRWRRRGWLAMLRER------------RKTKKEGC------------------KVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
G++ L AA G+ V LL G D +++ ++AL+ + H L++ GAD + D + PL A + G +V NL+ G+ + R FG A + LA + ++ + + +KV+ A +G D ++ D D +AL AA Y DV+K LL +GV ++ V D PL A ++N LLDAGAD + L A + + LLR GA V +D+ S+ALH+ + D+LLR GA E +D G P+ +F KR+ + + + E E +LL APADR WRRR WL MLRER RK KK G + R G G ++ L G+ + L+ + +GVFRT++G++
Sbjct: 67 GRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGA--NPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDK--------NGHVATVKVLLA-AGADTDI-----------RDLDSHSALVFAAQYE-RIDVMKALLEHGVDVN-VGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLF-KRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.910e-18 Identity = 117/421 (27.79%), Postives = 176/421 (41.81%), Query Frame = 2
Query: 290 GAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHE-TPLTKAAEGGHLRVVKNLVRVGS---FIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRK-FGDTREEFLQYTLCMSAELGNLKVIEAL--SGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAAT--LLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHGAGV----DASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRERRKTKKEGCKVARKEGAESG-----------GVEGDIV--LGGVATWLLAVAEEGVFRTVMGFL 1474
GA ++K + + ++AL+ A GH L++ G+D + RD + + L++A +G H + V +L+ G+ + +A L+ +G LL G T E L ++ G+L ++E L +G D +L + + +D + G T L A+ ++ A L+ A ADT +S G W L A H V+ LL++ A V DA+ + + LH A V + A DLLLRWGADET + G TP+ V + D + E + R LL AP DRRWRRRGWL +LR R C K ++SG G D+ GV L + E VFR+V+GFL
Sbjct: 94 GADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYET---PLMLAVRRGHLAIVETLLEAGADCSLRQLEDY------------SXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKSV--GGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGD--TPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDV----LGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRTIVVAHRC---AKGASDSGLSLCQARRNGKGARIDVAGNSSGVVELLTELEPEAVFRSVLGFL 488
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D8LP48_ECTSI (EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 4.710e-18 Identity = 129/485 (26.60%), Postives = 190/485 (39.18%), Query Frame = 2
Query: 128 LHVASDDGRHEDVRELLMSSKGK-DRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDAR---------DEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHE-----------SVARLRFGVEEGFDGAFQVLLAGNLCCRKFGDTREEFLQYTLCMSAELGNLKVIEAL--SGEDVN---LDGTSSWVCKNHLDHDPATALHVAAWYVGHNDVVKYLLANGVRIDPVNGDGGTPLMHAVEWNHPLVAAT----LLDAGADTSSRSPHDGVWNMLEQAIVHSSV-----DMARPLLRHGAGVD-ASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTPMAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLRERRKTKKEGCKVARKEGAESGGVEGDIVLGGVATWLLAVAEEGVFRTVMGFL 1474
LH AS+ G VR L+ S+ G+ + Q G+T L LA+REGH V EL+ GA ++ +S N + DA +TPL +A E GH VV+ L+ G+ + S+ + F G + LL+ GD FL++T+ ++ G+ V++ L +G DV D +C ++A +AT +++A D+ + + + +L + +S D LL+ GA V+ S + LH M N + + ++ DLLLRWGADETM D G TP + + L E VR LL NAP DR WRRRGWL MLR T G V E + GG G L ++L++ E+ VFR V+ FL
Sbjct: 9 LHSASEYGDVWKVRTLVKSADGRLALNSVQDAGRTPLQLASREGHVLVVEELVAAGADVNFRSPNDGXXXXXXXXXXXXXXXXXXXXXXXXEEDAGRGLSSTWTVGANLKTPLVEAIENGHFPVVQTLLSKGADATLDVGCSMRDLGDMSLRPIDFAALRGDNDIMTALLSDI-----DGDC---FLEFTIILACRRGHFAVVKTLLDNGCDVKTSQFDFDQPLICAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNAGAEREYDYSATKTKAVMEAILDSGAEPDEEELGYLLSVGVCKTSTLENMYDARLMLLQRGAPVNFCSYGGQTPLHHIM-NRGSCVPSVVDLLLRWGADETMKDERGKTPADYLGR--------IRNLDPAVAERVRHLLVNAPKDRAWRRRGWLVMLRAH--TLAAGEPVDIPEPKKRGGGGGVCPL----KFVLSLNEDAVFREVVAFL 470
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: UPI001EE553A4 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE553A4) HSP 1 Score: 95.9 bits (237), Expect = 2.590e-17 Identity = 99/361 (27.42%), Postives = 159/361 (44.04%), Query Frame = 2
Query: 101 ARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAGNLCCRKFGD--TREEFLQYTLCMSAELGNLKVIEALSGEDVNLDGTSSWVCKNHLDHDPATALHVAAWYVGHN-DVVKYLLA-NGVRIDPVNGDGGTPLMHAVEWNHPLVAATLLDAGADTSSRSPHDGVWNMLEQAIVHSSVDMARPLLRHG-AGVDASDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLT 1168
+R G++P+ +A+D GR E V +LL+ + D G T L +A+ +GH + R +L+ + +C +TA+ AA FGH +V D+LV G+D D L A GGH+ +VK +++ G FGD +R + + ++A G+++V E L G++ L D + LH A VG+N ++V +L N V ID +GDG TP+M A E+ H + L+D DT N+L + VD+ + +L G VD+ ++ + M+ + DLLL G D + LD +G T
Sbjct: 221 SRGKCGWTPVMIAADGGRQELV-DLLVRQRC-DLSLTDDDGNTILHVASIKGHWKTVRYILSKKTVDVNITGHCNRTAVMAAARFGHRKVFDLLVKNGSDLSTVDSDENNILHIACIGGHVEIVKYILKNG-----------------------------------FGDINSRGHNRRTPVMLAANSGHIQVFELLVGKECLL---------RTKDRNGTGILHFAC--VGNNVEIVDGILKRNIVSIDSKDGDGKTPVMLAAEFGHTDMFTFLVDNQCDTQVVCEKGN--NVLHTSCALGHVDIVKCILTQGPVNVDSCGQNQ--MTPVMLAAKNGHRDIFDLLLNNGCDTSQLDKDGNT 529
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 7.740e-17 Identity = 84/245 (34.29%), Postives = 125/245 (51.02%), Query Frame = 2
Query: 827 RIDPVNGDGGTPLMHAVEWNHPL----VAATLLDAGADTSSRSPHDGV-WNMLEQAIVH--SSVDMARPLLRHGAGVDA-SDEDSSALHVAMVNCDTNIEAMTDLLLRWGADETMLDSEGLTP---MAVFDKRIDVQIDDVSQLTEKEKEGVRQLLRNAPADRRWRRRGWLAMLR----------ERRKTKKEGC--KVARKEGAESGGVEGD------IVLGGVATWLLAVAEEGVFRTVMGFL 1474
+D + G T + AV + PL V LL+AG ++ + D + W L A+ +S+D LL GA +A D + LHVA ++ +N+ A+ +LLLRWGADET + G P + V+D R DV +DV + + +R++L APADR WRRRGWL + R + + + C KVAR G + GG E + + GG+ LL + +G+FR V+GFL
Sbjct: 268 EVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMH--SNVAAV-ELLLRWGADETCSNDNGDVPADVIGVYD-RGDVNDEDVKA----DHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Match: A0A6H5JIG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG3_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.480e-16 Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 2
Query: 134 VASDDGRHEDVRELLMSSKGKDRDEFQGGGKTALMLAAREGHPRVARELLNHGAKIDKKSANCEQTALHFAAGFGHNEVVDILVMLGADRDARDEKHETPLTKAAEGGHLRVVKNLVRVGSFIEHESVARLRFGVEEGFDGAFQVLLAG 580
V +DGR EDV ELL+S++GK D+FQGGGKTALML AREGH V ELLNHGA+I+K C ++ + + L G+ + V RL +GVEEGF LL G
Sbjct: 7 VDLEDGRAEDVVELLVSNEGKGTDDFQGGGKTALMLTAREGHKSVVCELLNHGAEINKNGEKCXXXXXXXXXXXXXXXXXXXXXXXXXXLESPHSRLKGALXXXXXXXXXXXXXXXXLGGATVSCGYVGRLLYGVEEGFGATLDNLLGG 155 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig85.16180.1 >prot_C-linearis_contig85.16180.1 ID=prot_C-linearis_contig85.16180.1|Name=mRNA_C-linearis_contig85.16180.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=469bp MQNTLKQLERARIDAGYSPLHVASDDGRHEDVRELLMSSKGKDRDEFQGGback to top mRNA from alignment at C-linearis_contig85:691840..693316+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig85.16180.1 ID=mRNA_C-linearis_contig85.16180.1|Name=mRNA_C-linearis_contig85.16180.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1477bp|location=Sequence derived from alignment at C-linearis_contig85:691840..693316+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig85:691840..693316+ >mRNA_C-linearis_contig85.16180.1 ID=mRNA_C-linearis_contig85.16180.1|Name=mRNA_C-linearis_contig85.16180.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2814bp|location=Sequence derived from alignment at C-linearis_contig85:691840..693316+ (Chordaria linearis ClinC8C monoicous)back to top |