mRNA_C-linearis_contig84.16141.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: D8LMQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ6_ECTSI) HSP 1 Score: 210 bits (535), Expect = 9.850e-68 Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 2
Query: 107 MNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
MNRCASGIKGVLETLAN+LKQ EEEIKADEAGK EFER L+Q L EKK+EIE+RI+ N RWT+SFDQDLGPF KMY+AKT+EIASIYDDAK RH+EG+KVLVNEF+YHPEFFRP+D FHATPFVPK
Sbjct: 1 MNRCASGIKGVLETLANKLKQQEEEIKADEAGKLEFERRLSQ-LREKKREIESRIDANMRWTASFDQDLGPFAKMYKAKTKEIASIYDDAKARHREGVKVLVNEFNYHPEFFRPKDGFHATPFVPK 125
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A7S2V5K3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5K3_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.870e-40 Identity = 73/134 (54.48%), Postives = 91/134 (67.91%), Query Frame = 2
Query: 83 ITTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
IT K F MNR A+G+KGVL+ L NQLK LEEEIKADE GK EFER LA L +K+++ RI+ N W S++D D+GPF+ Y +I +Y AK+ HK+ I VL EF YHPEF RP D+F A+PF PK
Sbjct: 17 ITLKQFDLMNRTANGVKGVLDNLRNQLKVLEEEIKADEDGKAEFERQLAN-LQRRKEDLLKRIKENREWASTYDSDMGPFQSNYDNIAHDIGDLYSGAKKHHKQAIGVLKREFGYHPEFKRPTDTFSASPFRPK 149
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A2D4BM09_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM09_PYTIN) HSP 1 Score: 118 bits (295), Expect = 1.550e-30 Identity = 59/133 (44.36%), Postives = 90/133 (67.67%), Query Frame = 2
Query: 86 TTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+ K MNR SGI GVLETL ++ L+ EI+ADE+GKQ+++ L + LGE+++++++++ W ++F+ + P E Y A T+ + Y+DAK RH +GI+VL++EFDYHPEF R D+F A PF PK
Sbjct: 53 SAKDAHTMNRVTSGISGVLETLQMKIDLLDREIRADESGKQDYDDQLFR-LGERRRDLDSKLRQCRDWIATFESKIQPLEGKYDATTQLMQQQYEDAKLRHAQGIQVLIDEFDYHPEFKRYSDTFSAVPFRPK 184
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A1W0A799_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A799_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.790e-28 Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = 2
Query: 83 ITTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+ K MNR SGI GVLETL ++ L++EIKAD GK+++E L + L +K++I +++ RWT F + P E Y+A T E+++ YD AK +H +G++VL++ F+YHPE+ R D F A PF PK
Sbjct: 21 VNAKEAANMNRSTSGIAGVLETLQGKMDVLDKEIKADMKGKKDYEDELFK-LQTRKEDILVKLKECQRWTDLFASKIQPLENSYKATTVEMSNEYDQAKVKHAQGLQVLIDNFNYHPEYKRYNDEFSAVPFRPK 153
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A7S3DC27_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DC27_9EUKA) HSP 1 Score: 109 bits (273), Expect = 9.710e-28 Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 2
Query: 107 MNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+N AS I +LE ++QL EIKAD+ G +++ER L L +K+++E RIE NT+W +S+D ++GPF + Y T ++ +YD+AKE+H G+ +L EF+YHP F R D F A PF P+
Sbjct: 17 LNSNASNIANLLENAQTAVEQLNTEIKADDKGIEDWERQLGY-LTRRKRDLEKRIEANTKWATSYDGEIGPFTQKYDNFTSDLGKLYDNAKEKHAGGLDILKEEFEYHPAFKRWHDYFSAVPFKPE 141
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A8K1CM03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM03_PYTOL) HSP 1 Score: 110 bits (274), Expect = 1.040e-27 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 2
Query: 107 MNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
MNR SG+ GVLE+L ++ L+ EIKADE GKQ+++ L + L E++ + E ++ W +F+ + P E Y A T+ + Y DAK RH +GI+VL+++FDYHPEF R D+F A PF PK
Sbjct: 32 MNRVTSGVSGVLESLQMRIDMLDREIKADEKGKQDYDDQLFR-LNERRTDYENKLRQCRDWIETFESKIRPLEGKYDATTQLMQEQYGDAKLRHAQGIQVLIDQFDYHPEFKRYSDTFSAVPFRPK 156
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A662WQL8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQL8_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.440e-27 Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 2
Query: 86 TTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+TK R MNR SGI G LE + + QL EIKADE GKQ+++ L + L +++K++E ++ W++ F+ + P Y T + Y+DAK RH +GIKVL+ FDYHPEF R D+F A PF PK
Sbjct: 24 STKDARKMNRVTSGIGGALEGVQMTINQLNREIKADEKGKQDYDDQLFR-LNQRRKDMEAKLLECREWSALFESKIKPLAGKYTETTDNMQGQYEDAKLRHAQGIKVLIENFDYHPEFKRFSDTFSAVPFKPK 155
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: T0RR79_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RR79_SAPDV) HSP 1 Score: 109 bits (272), Expect = 1.980e-27 Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 2
Query: 83 ITTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+T K MNR SGI G L+TLA ++ LE EIKAD GK+++E L + + +K++I ++ RW F + P E Y A T E++ YD AK +H +G++VL++ F+YHPE+ R D F A PF PK
Sbjct: 22 VTAKEASNMNRSTSGIAGALDTLAGRMDMLEREIKADMKGKKDYEDELFK-INTRKEDIMRKLAECERWNGIFQSKIKPLENSYLATTVEMSEEYDQAKIKHAQGLQVLIDNFNYHPEYKRYNDDFSAVPFRPK 154
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A485L8Q1_9STRA (Aste57867_17265 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L8Q1_9STRA) HSP 1 Score: 108 bits (269), Expect = 5.590e-27 Identity = 56/134 (41.79%), Postives = 82/134 (61.19%), Query Frame = 2
Query: 83 ITTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+T K MNR SGI GVL++L ++ L+ EIKAD+ GK+++E L + L ++++I ++ RW F + P E Y A T E++ YD+AK +H G++VLV+ F+YHPEF R D F A PF PK
Sbjct: 22 VTPKESSNMNRSTSGIAGVLDSLKGKIDILDREIKADQKGKKDYEDELFK-LNTRREDITKKLNECQRWIDLFASKIQPLENSYSATTAEMSDEYDEAKIKHASGLQVLVDNFNYHPEFKRYNDDFTAVPFRPK 154
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Match: A0A6G0XHA4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHA4_9STRA) HSP 1 Score: 108 bits (269), Expect = 5.590e-27 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 2
Query: 83 ITTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERILAQQLGEKKKEIETRIETNTRWTSSFDQDLGPFEKMYQAKTREIASIYDDAKERHKEGIKVLVNEFDYHPEFFRPRDSFHATPFVPK 484
+T K MNR SGI GVL++L ++ L+ EIKAD GK+++E L + L +K++I ++ RW F + P E Y+A T E+++ Y++AK +H G++VL++ F+YHPEF R D F A PF PK
Sbjct: 22 VTPKEASNMNRSTSGIAGVLDSLKGKIDDLDAEIKADRKGKKDYEDELFK-LNTRKQDITAKLNECQRWIDLFASKIQPLENSYKATTGEMSNEYEEAKIKHANGLQVLIDNFNYHPEFKRYNDDFTAVPFRPK 154 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig84.16141.1 >prot_C-linearis_contig84.16141.1 ID=prot_C-linearis_contig84.16141.1|Name=mRNA_C-linearis_contig84.16141.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=138bp MAPITTKHFRGMNRCASGIKGVLETLANQLKQLEEEIKADEAGKQEFERIback to top mRNA from alignment at C-linearis_contig84:811884..813077- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig84.16141.1 ID=mRNA_C-linearis_contig84.16141.1|Name=mRNA_C-linearis_contig84.16141.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1194bp|location=Sequence derived from alignment at C-linearis_contig84:811884..813077- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig84:811884..813077- >mRNA_C-linearis_contig84.16141.1 ID=mRNA_C-linearis_contig84.16141.1|Name=mRNA_C-linearis_contig84.16141.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at C-linearis_contig84:811884..813077- (Chordaria linearis ClinC8C monoicous)back to top |