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Homology
BLAST of mRNA_C-linearis_contig84.16098.1 vs. uniprot
Match: D8LMX4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX4_ECTSI) HSP 1 Score: 183 bits (464), Expect = 4.110e-43 Identity = 99/149 (66.44%), Postives = 111/149 (74.50%), Query Frame = 1
Query: 310 WAVKQRFSTLDAMRHALWKNRLPLPADARFPRKQAPLMHLVNKWQAPWTPATAMPANEMEGRRSGLEAYLSALSGLKESWRSVIVTAVLC-AEQEGTSAAVSPATDQVRDWDAKTSPGLPPPITKAVSWVDQQNPAAALTEVAAGPGTA 753
W VKQRFSTLDAMRH LWK RLPLP D FPRKQAPL+ V+KW AP T AMPA EME RR GL+AYLS LSGLK+SWRS +VT VLC AE + TSA+ SPA +Q + +S LPPP+TKAVSWVDQQ PA ALT+ AA P A
Sbjct: 18 WTVKQRFSTLDAMRHGLWKKRLPLP-DVPFPRKQAPLLMFVHKWHAPGT--LAMPAEEMEERREGLQAYLSELSGLKDSWRSDVVTEVLCLAEDDATSASASPAGNQANEAQPPSSSALPPPVTKAVSWVDQQTPATALTDFAARPDEA 163
BLAST of mRNA_C-linearis_contig84.16098.1 vs. uniprot
Match: A0A6H5KCA3_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA3_9PHAE) HSP 1 Score: 176 bits (446), Expect = 8.610e-41 Identity = 101/163 (61.96%), Postives = 114/163 (69.94%), Query Frame = 1
Query: 310 WAVKQRFSTLDAMRHALWKNRLPLPADARFPRKQAPLMHLVNKWQAPWTPATAMPANEMEGRRSGLEAYLSALSGLKESWRSVIVTAVLC-AEQEGTSAAVSPATDQVRDW---------DAKT--SPGLPPPITKAVSWVDQQNPAAALTEVAAGPGTAAQR 762
W VKQRFSTLDAMRH LWK RLPLP D FPRKQAPL+ V+KW AP TPA MPA EME RR GL+AYLS LSGLK+SWRS +VT VLC AE + TS + SPA DQV++ +A+T S PPP+T A SWVDQQ PA ALT+ AA P A R
Sbjct: 11 WTVKQRFSTLDAMRHGLWKKRLPLP-DVAFPRKQAPLLMFVHKWHAPGTPA--MPAEEMEERREGLQAYLSELSGLKDSWRSDVVTEVLCLAEDDATSPSASPAADQVQEESFARSCQANEAQTPSSSAPPPPVTNAASWVDQQTPATALTDFAATPDEAPHR 170
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Phox homologous domain |
| Ec32 ortholog | Ec-02_003980.1 |
| Exons | 5 |
| Model size | 3638 |
| Cds size | 3636 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930630.3711216-CDS-C-linearis_contig84:312255..312790 | 1622930630.3711216-CDS-C-linearis_contig84:312255..312790 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 312256..312790 - |
| 1690881168.2876573-CDS-C-linearis_contig84:312255..312790 | 1690881168.2876573-CDS-C-linearis_contig84:312255..312790 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 312256..312790 - |
| 1622930630.3943405-CDS-C-linearis_contig84:313396..315858 | 1622930630.3943405-CDS-C-linearis_contig84:313396..315858 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 313397..315858 - |
| 1690881168.2981951-CDS-C-linearis_contig84:313396..315858 | 1690881168.2981951-CDS-C-linearis_contig84:313396..315858 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 313397..315858 - |
| 1622930630.4184074-CDS-C-linearis_contig84:316317..316518 | 1622930630.4184074-CDS-C-linearis_contig84:316317..316518 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 316318..316518 - |
| 1690881168.30869-CDS-C-linearis_contig84:316317..316518 | 1690881168.30869-CDS-C-linearis_contig84:316317..316518 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 316318..316518 - |
| 1622930630.4449399-CDS-C-linearis_contig84:317134..317267 | 1622930630.4449399-CDS-C-linearis_contig84:317134..317267 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 317135..317267 - |
| 1690881168.3178303-CDS-C-linearis_contig84:317134..317267 | 1690881168.3178303-CDS-C-linearis_contig84:317134..317267 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 317135..317267 - |
| 1622930630.4679928-CDS-C-linearis_contig84:321650..321955 | 1622930630.4679928-CDS-C-linearis_contig84:321650..321955 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 321651..321955 - |
| 1690881168.3265407-CDS-C-linearis_contig84:321650..321955 | 1690881168.3265407-CDS-C-linearis_contig84:321650..321955 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig84 321651..321955 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig84.16098.1 >prot_C-linearis_contig84.16098.1 ID=prot_C-linearis_contig84.16098.1|Name=mRNA_C-linearis_contig84.16098.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1212bp
CSDTHTAASPPHTYIEEGRSSLLCLGLRECSKALFEVPGLRNERVISCLP
PAAEVRRQYQTRVGCERSLVCVENMLLLKVEVVPGTEAGPVFYEISHERD
GRTWAVKQRFSTLDAMRHALWKNRLPLPADARFPRKQAPLMHLVNKWQAP
WTPATAMPANEMEGRRSGLEAYLSALSGLKESWRSVIVTAVLCAEQEGTS
AAVSPATDQVRDWDAKTSPGLPPPITKAVSWVDQQNPAAALTEVAAGPGT
AAQRSALVSPPPPPPPVSAMRSSSPSVKRPADEDPAASSAEGTAPPSESG
SASDSTDARSVRRSKNDEAGADYGADHVGEKAAVTAATAAADRAAAVVAV
PEPELERSPPSAAPVVVSSEDDGPSSPLAPVAAAAADDDAPDVVEAGAPA
ATPAAAAALPAAVGEAVGEAVAPPSPPEADTGAAVSDLAARNAAAVTPDN
PPKPEQSHLPLLIRRLREREQMWRESGQANAQTTVTAAAAAAASDSTSAT
RRDVAATPPAAAAGDAVRPADDAIAIADSAASTPTIATTAANVVKAEVGP
GGTTPPPSYETLVLPSKAAADASDEIGFAEQQEEAPGVTGVALASGGDTT
APKEQEDTASAEQDAPATEGKASGPAKEEEGEEAAAPGLPDEGVAATQVD
EGAAASSPVGEVATFTSAPVEDVAARTPTDEGIAAPQADDEGEVAATVAP
VENGDASTPPSGSRDIIDQGNGKEEGESVRGREGASAVSELGSSSATEEG
AEKDDSGVRQEESGEQQEDESRAAGDDAIKAGNTAEVSTQAAESLLPSLL
LSEPTAAAKAAALLAAEIAAEKDAQTMDGGGRKDQAKAATSPAAASTATA
AAAAPVTIQPTAERVAEITIKQDEETDTPAPAAGLHIAAPFADRQAVPFP
AAAIGITPKQEKQLAATGPTLTLSSLAADAVAAAAAAEEEAGEDAGGRND
RGGASAVSALTLSSATDDSKEEAAPAAGSGVTPAVARGAAAATQQEAGVF
FANSAANAAESEDATSLPTPTAATPKRRTSFLGRAKRSLSSKKTGSGSKQ
KDSAAAASTSPAASDLTDEKAAAAAAAIAALPSLSAAAISSSTTAATPRT
VSRLESFRNKARSLTGRLSAGGGGGSGPLSARLGGGSGPTSGRRSVSGPL
SLSSARGKGEGFFSMTTRSPEEREIPARGGGGKFKGRREREAIAEGATVS
PDSLGSEGGSGS back to topmRNA from alignment at C-linearis_contig84:312254..321955- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig84.16098.1 ID=mRNA_C-linearis_contig84.16098.1|Name=mRNA_C-linearis_contig84.16098.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9702bp|location=Sequence derived from alignment at C-linearis_contig84:312254..321955- (Chordaria linearis ClinC8C monoicous)
TGTAGCGACACACACACAGCGGCTAGTCCTCCGCACACATACATCGAAGA
AGGGCGAAGTTCCCTCCTGTGCCTGGGTTTGCGAGAGTGTTCGAAGGCCT
TGTTCGAGGTGCCAGGACTGCGAAACGAGCGAGTTATTTCCTGCCTACCA
CCGGCAGCGGAGGTTCGGCGTCAATACCAGACCAGGGTTGGTTGTGAGAG
GTCATTAGTCTGCGTCGAAAATATGTTGCTGTTGAAGGTGGAGGTGGTGC
CAGGGACGGAGGCGGGACCCGTCTTCTACGAGATCAGTCACGAGCGCGAT
GGAAGGTGAGCAAGTGTGTGTGTGTGAGAGAGAGAGAGACCAGTTTCGAG
CTGCGAGGTATCTGATCTTTTCTTCTCTTCTCTGTTGTTTTGATGCGATT
CATCACCCACTTCAAAAATGGAGCTTTTGGTGGGCGTGCGAGATTTTCGG
AAGTATTTTGATGCCTTCCATCTTGATGCGAGACAGAGACAGAGACAGAG
ACAAACACACAGATGAGATGCACGGCATCCCGCTTCAGCGCACGCCACAC
AAAACAACGGGTTGGTTTATCTCTGCGTGCCTCACGGCCGTGCGATCAAT
CGCTAATAGTTCGTCCAGACCGATTGATATCGAGTTCGAATGGCTCTTTG
ATTCGGCGAAGGAGAGTAAGTGCGCCCCGAGAGAGAGGGGCGGCCAGGAA
AGGCCAAGGCTTGGCATTTCAAATCGGTGACCCTCCACAGCAGTATATGT
AACAGAGAGGTCGCAGGATAAAACGCTGCTACTACTAGCAGTAGCAGCGT
TTCATCCTGCAACATGGGTGACCTTTCGGGGGAGTGATGAACACAAGCAG
CGCGGCGGTCCTTTGGGTCTTCCTGTCTATTCAGACCATGCCCAAGCTTG
CAATAGGGCCCACCCGCTGGAACGTCGTTGGATCTGGTGTCTGATGGCCA
TCATTTTACTCGTGTAGCTACTTCCTGTAGCGGGTTCGTGCAGGGCAGTC
AAGCCGTTGAAGTGCAGTTTCACAGTTTATGTGTGGTGTCACCTTGTCTG
CCGCATGGGCATGGAGGATTCCTTTACCAATCCAAGATAGGCACGGCCAC
TGGTCCGACTAATTCCGATACGGTATGCAACAAGTCTTCGTTGTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTAAAAACCATCCCGGT
CCCGTCTCTATCCAGTACCTCCTTCTGTCTCAACCTCTCCGTACTAATCC
ATCACTTGACGCGGCCAATTTCCGTGGTCACAAGCTAACTTACCTAAAAA
GGTACAGTATACTGAAAAATGAAACGGACCCCAAGGGCCAGCAGAGCAAT
AATACGAGAAAAATAAAAGAATCAGGAAACAAATAGTCTGGAGCCTTCCG
CTCCCCTCTACACGCTATGTGAGGCAAAAATAAAAATAAAACAATAGTGG
AGCGCCAGCATCACCAACCAGGGGTATAACCTCCCGATTCTATCTTGCTA
CCCCTACGAAGCCGGGGTGTTCCGTCCCAGTTCCCCCGGCAAGGCAAATA
CATAGTCGGATCCCTCTCCACCGACTAAGGTGTATACTTCTATGTATATA
TATATGTGTTACAAGGGAAGCAGACAAGGAGACATGTCGACAAAAATAAA
ACATCCAACACGCAGAGGGACAGTCACACCCGGAATAAAAATCTAAACAC
GACATGATTCCCCGGGGGGGTAGTGTAATGGTGCAGCGAAAAAAAAAAAA
AAAAAAAAAAAAAAGGGGGGGGAGAGGGGAAAGTAAAAGGAAAAAATAGT
CACTAGGCTCAATCCGTCACATATCGCGCCACCCGGTCGGTCTCTTCTCG
CTTGCTTTCTTCCCTCGCCGTTTCTTTCCGCCCCCCTCCCGTCCCGTTGG
TTGGCGCCGTGTCTAAACTATTTCTGGGCCCGTCGTCTCCTCGCTTGGTG
GCGCGTTGTCGGCTCGCCTCCTCCTCGTCCTTGTGCCAAGAGGCCATAAA
CCTCTCGGCTCCCTGCAGCACCCCCGCGCCACGGTACTCCCCTTCACCTT
CGCCGCCTCCGCCCAAATTAATTTAGGGACTCCGAAGACACACGGTTCGT
CGGCCGTGGAGCCGTGCGTGGCCCCGAACGCCTTCAAATCGTCCTTGAGG
CATATCAGCCAGCTCTGCTCCGGGCTTCCCCTGCCCGGGTCCTCCCCTCC
CACCACCTCGCCGAACATCAGTCGCTTCGGGAGTCGCCCGTCCGGCTGCC
TTGCTACGGCCCCCGCGAAGAGCAGCCGCCGCTGACGGACAGTGGCTTCC
ACGCTCTGGCAGCCGACTTGCTTCAGCGCCTGGGCGTATGACAGCTGCCG
GTGGGTACCCCGCTTGCGTCGGTATCCGATGACTCGCAGGAGCAGCCGGT
GGTGTGTCGTCTGCAGCAGCCGGTAGTGCTCGCGACGCGGTGACCACGAC
ATGCAACCGTACAGTAGCGCCTCCATTGCCTCCGCCTTGAGTAGGCGAGT
CTTGAGCCGGAACGGTGCTCCCGGCCTGTCGAAGAGCTCCCGGGCATATC
TCCTTAAGCACGCCCAGGCTATTTTGCTCCTGTAGTTGATCTCTCGGGTG
AGGTCGCCGTGTTCGTTGACGAAGCCACCAAGTACCGGAACTCGGTCGTC
TGCGCGTACCTCTGCCCCGCTGCTTCGATGATCAGCGGCGGCGGCGGCGG
CGGTGGTGGCTGCTTCTCCTTCACGCGCATCAGGAGGGTCTCCGTCTTCT
TCTCCGATACCGTCAGCCCGAACTCCCGGAGTACCTCCACGATAACGGTC
ATCATCCTCGCCAGTCCGTCGGCTGATTTCGACACCACGCCGGCGTCGTC
GGCGTACAGCATCGCCCATACCGCCCGCCGCACTTGATCAAGCGGTGTCC
CCACCCCCGCTCCCGGCTCCTCCTTCAAGTGCAGCAGGTTCTGCATAATG
ACCTCATCCTCGCTGAATCGCACGGCAATGATCTCGATGGGCGCGGCGAA
GAACACGTTGAAAAGCAGTGGGGACATTGTACACCCTTGGCGCAGGCCCT
GCGTGACCGAAAACCAGTCCGATAGCTCTCCGTCGTCCATGCGCACCCGG
GCCCGCATCCCCACATGGAATTGGCGGATGACGGCGATCATCTCCGCGGG
AATCCCGGCCCGGGCCAGCACCTTCCACAGCAGCTCTCGGTCCACCGAGT
CGTAGGCCTTCTGCAGGTCGACGAAGCACATGTAGAGCGGTATCTTCCTC
CTCCGCCCTAACTCCTGGAGTCGGCGCACCACGAACAGCATGCATACCGT
GGATCGGCCAGGTCGGAACCCGCACTGCTCCTCCGGAAGGATGTCGTTGG
CTTCGCAGTATGCACTCAGGCGGTTGGTGATAGTCTTGGCGAGGACCTTG
CCTACGTGCGACAGCAACGAGATGCCCCTGAAGTTGTTGCAGTTGGCCCA
CTCCCCCTCTTGTACAGCACCTTGATGATTGCGTCCTTCCACTCCTGCGG
CATCTCTCCCCGTTCCACACTTCGACGAAGATGGCGTGTAGGTGCTCCAG
GACAATGGGTTCGTCGCCGTCGATCTTGAGCAACTCGGCATGGAGGGCGT
CATCGCCGGGCGCCTTCCAGTTCTGCAGACCTTTCGTCGCCCTCTCCACC
TCCTCGAGGTCCGGCGCTGTTCCCAGCCGTCGAGTGGCTCGGGTCGTTGG
TCGCTGTGTCACTTGCTCGACGACGCCCGGGTTCAGGGTGGGGGACTTGG
TGCTGAGGAGGGTGCCGAAGAATCTCTCCCACCGTTTGAGGATGTCTTCC
TTGCCCCGGAGCAGCACGCTCATAGCACAGCCACAGCAGTAGCGGCGGCG
GCACAACGTGTGGAAAGTCAAGGGCTTAGGGAGGGCCCGTGCGGTGATTT
TTCACGTACCCCAAAACAAAGCGACTCAATAAATCAGTCGGGCGTGCGTT
TTCACTGAGCCCCCAAATACCGAGAAAACACGGGGCCACGTGCGATGCCA
CATGCGCTACTGCTGTAAACGACAACATATCCTATTAACATACAGGGTTG
TCACCCTTTCGGGGTTATTAATCGCCCGCACCGCCTTGGAAACTCGCGGT
TGCAAAATGCAGCCCGCCCTTGTTTGCAAGAATACAGGAGCAGAAAAGAA
CAGAGCTATAGAGCACTTACTTCGGCTGGGGCCATCACGACGTATAAGAC
TCATCATATGTATTGTCTAATTTTCGTCGAGACAACTATCTACAAAAACA
ACACCTACATACATATCTACATTGACACACTCGGAGGTAAATACACATGT
AAATATAATAGCACCGCAGGAGGTAGGTGGAGACATCCCCTCCTGGGTGA
CCCCGGATGGTAGCCTAGCTAGTTGTAGTGAAGAAGAGGAGGCAGGCTAC
GAAAAAACGAGAAAATAAATAAATAAATAAAAATAAAAGTAAAAATAAAA
GTCTAAATAAATACTTCGAAGTAGTGGATTAACTCCGCGTTCACCGCTGT
GGGGTTTGACCCACGATGGTTCCTCCTCCACCTCTCGGCCGCCCGTTCGT
GGGTTGGAATACTTAAAATCAACGTGCTACATAGGTCAACCAGTATTCTT
GTCCTTTGTGTCGTGTGCGGCACCGAACTACAGCGATTGTCACTAACCTC
ACCCTAAAACTTTTAAAATTGTCGCCGTCATTTCCCAGGACATGGGCCGT
CAAGCAGCGTTTCAGCACGCTGGATGCCATGAGGCACGCTCTGTGGAAGA
ACAGGTTACCGCTCCCCGCGGACGCGCGCTTCCCCCGCAAGCAGGCACCC
CTCATGCATCTTGTCAACAAGGTATGTATAGCAGTACGTATGTTTCGCCC
TACAACAGGTAGCTCCTGTGGTTTTCTGCACCCTCGGCTGGACTTTGATT
TCAGGCTCTCCGACGGCGTAGACGCCTAAATTACGGCGGTTCGTAGACAG
GTTGGTTGTTTCAACACGCAGATCAACATGAATCTCGGTTGCCAGCTGTA
GACTAGTCTAGCCGGGCGACCCTAGTGTGTACCCACTTGTGCTCTCTACA
TCTGCGCCGCCCTCTTCGCCTGCGCCATCGCATGTCGCCGCTGTCCGTTT
TTGTCTCCGTTGCGAAAAAAAAACACCACCGCGTTTTCGTGGTTGTTGTG
TTTCATTTCTGGCGCCTGAGATCCACCCACGGCGAATCTAATCGAATAGC
CACAAACCGAGCCACACAACAGCGGCAGCGGCGAAAGGCCCACCGCGCTG
TCCATCGGCGTCGAAGGACCTCCAGCGTTGGCGCAGGCAAAAACGTGCGT
GTTCTCAGAGCAAGCACCCAACCAGCAGAACGAACCTCCTGCAAGAAACG
AAACGAAACGAAACGAAACGAAACGAGAACGAAACGACCGACGGCCGGAT
CAACAACGAAAACCAACAACGCTTCGTCCTGACACAGTGGCAGGCCCCGT
GGACGCCGGCGACGGCGATGCCCGCGAACGAGATGGAGGGCCGGCGAAGC
GGCCTCGAGGCGTACCTGTCCGCCCTATCGGGGCTGAAGGAGTCCTGGCG
TTCCGTCATCGTGACCGCCGTGCTCTGCGCGGAGCAGGAGGGAACCTCCG
CGGCCGTATCTCCCGCCACCGACCAGGTTAGGGATTGGGTGGCCTCGCTC
GGTTTTGTGTGATCTTTATGCGGCCCTTTGATGCGTTCCTTTTTGCGTTT
GGATCCAGCTACATACGTATCTTCCGTATATATCCAAAAAAACACCGGCT
TGGTTTCAACCCGGTTGCTATTCGTTTCGTCGAGGGATGCGCTAATTTTT
TCCTTCATAGATGGTTGGCAGGCGCTTTGCGCTTTCAATACAAGTACCTG
CCGCCGGCCGGCCGGCAAGGTGTCGTGATGCGTGATGCCTACGCAAGCCG
GGCGCTCTCGTTTGCAATCGTCACGGAGCCGTTTTTTTTATCTTTGTTGT
TGCCCTCGAGATCTCGAACTCCGCTGCGTCCCCGCACCTGACCGCGCCCC
CCCCCGCAAACCTCTTCTCCACCCCCCGCTCATTCGTTTTGCATGCCGTG
CCCCTTGTCCCCCGCCCTCGTTGACTCCAAAACGGCAGCCCGCCGAGGAC
GCGAAAACTAGCCCTGGGCTTCCTCCTCCGATCACCAAGGCCGTGTCGTG
GGTCGATCAGCAGAACCCGGCTGCGGCGCTGACGGAGGTCGCCGCCGGGC
CCGGCACGGCCGCGCAGCGCAGCGCCCTGGTCAGCCCGCCGCCGCCGCCC
CCCCCCGTCTCCGCCATGAGGTCGTCATCCCCGTCGGTCAAGCGTCCGGC
CGACGAAGACCCGGCCGCCTCTTCTGCGGAAGGCACGGCACCTCCGTCAG
AGTCGGGGTCGGCGTCTGACTCGACGGACGCACGCTCTGTGAGGAGATCA
AAGAACGACGAAGCAGGTGCCGATTATGGTGCTGATCATGTCGGCGAGAA
GGCGGCGGTGACGGCAGCTACGGCGGCTGCGGACCGGGCGGCGGCGGTGG
TGGCGGTGCCGGAGCCAGAGCTTGAGCGATCGCCGCCGTCGGCAGCCCCC
GTTGTTGTCTCGTCGGAGGACGACGGCCCGTCGAGCCCTCTTGCGCCCGT
CGCCGCCGCCGCCGCCGATGATGATGCGCCCGACGTCGTCGAGGCAGGTG
CTCCCGCTGCCACGCCGGCGGCGGCCGCGGCGTTGCCGGCTGCGGTCGGC
GAAGCGGTTGGCGAAGCGGTAGCACCCCCCTCTCCGCCGGAGGCAGACAC
GGGCGCTGCTGTCTCAGACCTTGCCGCACGCAATGCTGCTGCCGTCACCC
CCGACAACCCACCCAAGCCTGAGCAGTCTCATCTGCCGCTGCTGATCCGG
CGGCTGAGAGAGCGGGAGCAAATGTGGAGAGAATCGGGGCAAGCGAACGC
GCAGACGACAGTTACCGCCGCCGCCGCTGCTGCGGCTAGTGATTCGACTT
CGGCAACGCGTCGGGACGTCGCGGCGACTCCGCCGGCGGCTGCCGCCGGT
GACGCCGTTCGCCCGGCCGACGACGCGATTGCTATTGCCGATTCGGCAGC
TTCCACTCCGACCATCGCAACCACCGCCGCTAACGTTGTCAAGGCGGAGG
TGGGTCCGGGAGGGACGACGCCGCCGCCGTCGTACGAGACGTTGGTGCTG
CCTTCGAAGGCTGCAGCGGACGCTTCCGACGAGATCGGCTTCGCTGAACA
ACAGGAGGAGGCTCCTGGGGTGACTGGCGTCGCTCTTGCAAGTGGCGGTG
ACACCACCGCACCGAAAGAGCAGGAAGACACCGCTAGTGCCGAGCAGGAC
GCTCCTGCTACAGAGGGCAAGGCCTCTGGCCCCGCCAAGGAGGAGGAGGG
AGAGGAGGCAGCAGCACCGGGCCTTCCCGACGAGGGCGTGGCCGCAACAC
AGGTTGATGAAGGTGCTGCCGCCTCTTCCCCTGTTGGGGAAGTTGCTACC
TTCACCTCTGCCCCCGTTGAGGATGTCGCAGCACGGACCCCCACGGACGA
AGGCATAGCCGCACCGCAAGCCGATGATGAAGGTGAGGTTGCCGCCACCG
TTGCTCCCGTTGAGAATGGCGATGCCTCCACTCCTCCCTCCGGGAGCCGC
GACATCATCGACCAGGGCAACGGCAAAGAGGAAGGGGAGAGCGTCAGGGG
GCGCGAGGGAGCATCCGCGGTGTCGGAGCTCGGGTCATCGTCCGCCACGG
AGGAGGGCGCGGAGAAGGATGACAGCGGCGTGCGCCAGGAGGAGTCCGGG
GAGCAACAAGAGGATGAGTCGAGGGCTGCTGGTGATGATGCGATCAAGGC
GGGGAACACAGCCGAGGTGAGCACGCAAGCGGCCGAGAGCCTTCTGCCGT
CGCTGCTGCTGTCCGAGCCAACGGCGGCAGCGAAGGCGGCGGCGTTGCTC
GCGGCCGAGATCGCCGCGGAGAAAGACGCGCAGACGATGGACGGGGGGGG
GCGCAAGGACCAGGCCAAGGCGGCTACGTCTCCCGCTGCCGCTAGTACCG
CTACCGCTGCCGCTGCCGCGCCGGTTACAATCCAGCCGACAGCCGAACGC
GTCGCCGAGATCACCATAAAGCAGGACGAGGAAACCGACACACCAGCACC
GGCGGCTGGCCTTCACATCGCCGCGCCTTTCGCTGACAGGCAGGCGGTGC
CCTTTCCTGCGGCCGCCATTGGGATCACCCCGAAGCAAGAGAAGCAGCTC
GCCGCGACCGGCCCCACCCTCACCCTGAGCTCCCTCGCGGCCGACGCAGT
CGCTGCCGCCGCCGCGGCGGAGGAGGAGGCCGGCGAGGACGCGGGCGGGA
GGAACGACCGCGGGGGTGCGTCCGCGGTGTCGGCGCTCACGCTGTCCTCG
GCCACGGACGACTCCAAGGAGGAGGCAGCTCCTGCTGCCGGTAGTGGCGT
AACCCCTGCGGTGGCGCGAGGGGCTGCTGCTGCTACTCAGCAAGAAGCGG
GGGTGTTTTTTGCGAATTCTGCTGCGAATGCTGCCGAGTCCGAGGACGCG
ACGAGCCTGCCCACTCCGACCGCTGCCACACCCAAACGCCGGACTTCTTT
CCTAGGAAGGTATGTACGCACCGAGTGCCTGCCTGTGTTTTGGGTGGTGG
CTGTGTTCTGTTTTTTTCTTTTTGCCGTCTGTCGGCCTTTTCGCGGCACC
GCCCTCTGTGGAATGCTCGACCGCTCGTGTGGTTTTAATTTTCAACCATC
GGAGAGGAAACGGCTGCATGCAGTCGTGGAATCGGTGGCGTTGAAACGGT
GTATTGCCTGTAGGATACGCTGAGATGCCTTCTCCCCTTTGAGGCGAGGC
AGTATCTCCGTCCAAAAATTGGCGAGAAAAACGCTGTGACTAAGCTCGGC
ATGTATTTTCTGGGAGAAACACCTAGTCCCCGCTGTTTGAGCAATAAAAA
AGTATACGAAGCATGGTTTTTGGCGCGCATACTAGGCATACATAAGCTGC
CGATGAAGTGGTGTTGTTTGTGATACCTTGCCGAGCTCCAAGCCTTTGGG
CCATGACATAACCGTTGTTGGTTGTTGCTGGTGGTGTGTAGTTGTGACTT
CCGTATCCAAAATCTCGCCTGAGTGAGCTACCCCGCTGCCCAACTCCAAC
ACATGACAACCATACCCCCTCCCCCCCACCTTCTCATCACCTTTCCTCGA
CTCGCACAACGGCAGGGCAAAGCGCTCCCTCTCGAGCAAGAAGACGGGCA
GCGGCAGCAAGCAGAAGGATTCTGCCGCCGCCGCCTCCACTTCTCCCGCC
GCCAGTGACCTCACCGACGAAAAAGCCGCCGCCGCCGCCGCCGCCATCGC
CGCGTTGCCGTCTCTCTCGGCGGCCGCCATCTCGAGCTCCACCACCGCCG
CCACCCCGCGCACGGTGAGCAGACTCGAATCGTTCCGCAACAAGGCCCGC
AGCCTCACCGGCCGCCTGTCCGCCGGCGGCGGGGGCGGCAGCGGGCCCCT
GTCTGCGCGCTTAGGCGGCGGCAGCGGGCCGACCTCCGGACGCCGGAGCG
TCAGCGGACCTCTGTCTCTGAGCTCGGCCAGGGGCAAGGGAGAGGGATTC
TTCTCGATGACGACAAGGAGCCCGGAGGAACGGGAGATCCCGGCCAGAGG
CGGCGGCGGCAAGTTCAAGGGACGGAGGGAGCGGGAGGCGATCGCGGAGG
GCGCGACCGTTTCTCCCGACAGCCTCGGGTCTGAGGGCGGGAGCGGGAGC
GG back to topCoding sequence (CDS) from alignment at C-linearis_contig84:312254..321955- >mRNA_C-linearis_contig84.16098.1 ID=mRNA_C-linearis_contig84.16098.1|Name=mRNA_C-linearis_contig84.16098.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7272bp|location=Sequence derived from alignment at C-linearis_contig84:312254..321955- (Chordaria linearis ClinC8C monoicous)
TGTAGCGACACACACACAGCGGCTAGTCCTCCGCACACATACATCGAAGA
AGGGCGAAGTTCCCTCCTGTGCCTGGGTTTGCGAGAGTGTTCGAAGGCCT
TGTTCGAGGTGCCAGGACTGCGAAACGAGCGAGTTATTTCCTGCCTACCA
CCGGCAGCGGAGGTTCGGCGTCAATACCAGACCAGGGTTGGTTGTGAGAG
GTCATTAGTCTGCGTCGAAAATATGTTGCTGTTGAAGGTGGAGGTGGTGC
CAGGGACGGAGGCGGGACCCGTCTTCTACGAGATCAGTCACGAGCGCGAT
GGAAGTGTAGCGACACACACACAGCGGCTAGTCCTCCGCACACATACATC
GAAGAAGGGCGAAGTTCCCTCCTGTGCCTGGGTTTGCGAGAGTGTTCGAA
GGCCTTGTTCGAGGTGCCAGGACTGCGAAACGAGCGAGTTATTTCCTGCC
TACCACCGGCAGCGGAGGTTCGGCGTCAATACCAGACCAGGGTTGGTTGT
GAGAGGTCATTAGTCTGCGTCGAAAATATGTTGCTGTTGAAGGTGGAGGT
GGTGCCAGGGACGGAGGCGGGACCCGTCTTCTACGAGATCAGTCACGAGC
GCGATGGAAGGACATGGGCCGTCAAGCAGCGTTTCAGCACGCTGGATGCC
ATGAGGCACGCTCTGTGGAAGAACAGGTTACCGCTCCCCGCGGACGCGCG
CTTCCCCCGCAAGCAGGCACCCCTCATGCATCTTGTCAACAAGGACATGG
GCCGTCAAGCAGCGTTTCAGCACGCTGGATGCCATGAGGCACGCTCTGTG
GAAGAACAGGTTACCGCTCCCCGCGGACGCGCGCTTCCCCCGCAAGCAGG
CACCCCTCATGCATCTTGTCAACAAGTGGCAGGCCCCGTGGACGCCGGCG
ACGGCGATGCCCGCGAACGAGATGGAGGGCCGGCGAAGCGGCCTCGAGGC
GTACCTGTCCGCCCTATCGGGGCTGAAGGAGTCCTGGCGTTCCGTCATCG
TGACCGCCGTGCTCTGCGCGGAGCAGGAGGGAACCTCCGCGGCCGTATCT
CCCGCCACCGACCAGGTTAGGGATTGGTGGCAGGCCCCGTGGACGCCGGC
GACGGCGATGCCCGCGAACGAGATGGAGGGCCGGCGAAGCGGCCTCGAGG
CGTACCTGTCCGCCCTATCGGGGCTGAAGGAGTCCTGGCGTTCCGTCATC
GTGACCGCCGTGCTCTGCGCGGAGCAGGAGGGAACCTCCGCGGCCGTATC
TCCCGCCACCGACCAGGTTAGGGATTGGGACGCGAAAACTAGCCCTGGGC
TTCCTCCTCCGATCACCAAGGCCGTGTCGTGGGTCGATCAGCAGAACCCG
GCTGCGGCGCTGACGGAGGTCGCCGCCGGGCCCGGCACGGCCGCGCAGCG
CAGCGCCCTGGTCAGCCCGCCGCCGCCGCCCCCCCCCGTCTCCGCCATGA
GGTCGTCATCCCCGTCGGTCAAGCGTCCGGCCGACGAAGACCCGGCCGCC
TCTTCTGCGGAAGGCACGGCACCTCCGTCAGAGTCGGGGTCGGCGTCTGA
CTCGACGGACGCACGCTCTGTGAGGAGATCAAAGAACGACGAAGCAGGTG
CCGATTATGGTGCTGATCATGTCGGCGAGAAGGCGGCGGTGACGGCAGCT
ACGGCGGCTGCGGACCGGGCGGCGGCGGTGGTGGCGGTGCCGGAGCCAGA
GCTTGAGCGATCGCCGCCGTCGGCAGCCCCCGTTGTTGTCTCGTCGGAGG
ACGACGGCCCGTCGAGCCCTCTTGCGCCCGTCGCCGCCGCCGCCGCCGAT
GATGATGCGCCCGACGTCGTCGAGGCAGGTGCTCCCGCTGCCACGCCGGC
GGCGGCCGCGGCGTTGCCGGCTGCGGTCGGCGAAGCGGTTGGCGAAGCGG
TAGCACCCCCCTCTCCGCCGGAGGCAGACACGGGCGCTGCTGTCTCAGAC
CTTGCCGCACGCAATGCTGCTGCCGTCACCCCCGACAACCCACCCAAGCC
TGAGCAGTCTCATCTGCCGCTGCTGATCCGGCGGCTGAGAGAGCGGGAGC
AAATGTGGAGAGAATCGGGGCAAGCGAACGCGCAGACGACAGTTACCGCC
GCCGCCGCTGCTGCGGCTAGTGATTCGACTTCGGCAACGCGTCGGGACGT
CGCGGCGACTCCGCCGGCGGCTGCCGCCGGTGACGCCGTTCGCCCGGCCG
ACGACGCGATTGCTATTGCCGATTCGGCAGCTTCCACTCCGACCATCGCA
ACCACCGCCGCTAACGTTGTCAAGGCGGAGGTGGGTCCGGGAGGGACGAC
GCCGCCGCCGTCGTACGAGACGTTGGTGCTGCCTTCGAAGGCTGCAGCGG
ACGCTTCCGACGAGATCGGCTTCGCTGAACAACAGGAGGAGGCTCCTGGG
GTGACTGGCGTCGCTCTTGCAAGTGGCGGTGACACCACCGCACCGAAAGA
GCAGGAAGACACCGCTAGTGCCGAGCAGGACGCTCCTGCTACAGAGGGCA
AGGCCTCTGGCCCCGCCAAGGAGGAGGAGGGAGAGGAGGCAGCAGCACCG
GGCCTTCCCGACGAGGGCGTGGCCGCAACACAGGTTGATGAAGGTGCTGC
CGCCTCTTCCCCTGTTGGGGAAGTTGCTACCTTCACCTCTGCCCCCGTTG
AGGATGTCGCAGCACGGACCCCCACGGACGAAGGCATAGCCGCACCGCAA
GCCGATGATGAAGGTGAGGTTGCCGCCACCGTTGCTCCCGTTGAGAATGG
CGATGCCTCCACTCCTCCCTCCGGGAGCCGCGACATCATCGACCAGGGCA
ACGGCAAAGAGGAAGGGGAGAGCGTCAGGGGGCGCGAGGGAGCATCCGCG
GTGTCGGAGCTCGGGTCATCGTCCGCCACGGAGGAGGGCGCGGAGAAGGA
TGACAGCGGCGTGCGCCAGGAGGAGTCCGGGGAGCAACAAGAGGATGAGT
CGAGGGCTGCTGGTGATGATGCGATCAAGGCGGGGAACACAGCCGAGGTG
AGCACGCAAGCGGCCGAGAGCCTTCTGCCGTCGCTGCTGCTGTCCGAGCC
AACGGCGGCAGCGAAGGCGGCGGCGTTGCTCGCGGCCGAGATCGCCGCGG
AGAAAGACGCGCAGACGATGGACGGGGGGGGGCGCAAGGACCAGGCCAAG
GCGGCTACGTCTCCCGCTGCCGCTAGTACCGCTACCGCTGCCGCTGCCGC
GCCGGTTACAATCCAGCCGACAGCCGAACGCGTCGCCGAGATCACCATAA
AGCAGGACGAGGAAACCGACACACCAGCACCGGCGGCTGGCCTTCACATC
GCCGCGCCTTTCGCTGACAGGCAGGCGGTGCCCTTTCCTGCGGCCGCCAT
TGGGATCACCCCGAAGCAAGAGAAGCAGCTCGCCGCGACCGGCCCCACCC
TCACCCTGAGCTCCCTCGCGGCCGACGCAGTCGCTGCCGCCGCCGCGGCG
GAGGAGGAGGCCGGCGAGGACGCGGGCGGGAGGAACGACCGCGGGGGTGC
GTCCGCGGTGTCGGCGCTCACGCTGTCCTCGGCCACGGACGACTCCAAGG
AGGAGGCAGCTCCTGCTGCCGGTAGTGGCGTAACCCCTGCGGTGGCGCGA
GGGGCTGCTGCTGCTACTCAGCAAGAAGCGGGGGTGTTTTTTGCGAATTC
TGCTGCGAATGCTGCCGAGTCCGAGGACGCGACGAGCCTGCCCACTCCGA
CCGCTGCCACACCCAAACGCCGGACTTCTTTCCTAGGAAGGACGCGAAAA
CTAGCCCTGGGCTTCCTCCTCCGATCACCAAGGCCGTGTCGTGGGTCGAT
CAGCAGAACCCGGCTGCGGCGCTGACGGAGGTCGCCGCCGGGCCCGGCAC
GGCCGCGCAGCGCAGCGCCCTGGTCAGCCCGCCGCCGCCGCCCCCCCCCG
TCTCCGCCATGAGGTCGTCATCCCCGTCGGTCAAGCGTCCGGCCGACGAA
GACCCGGCCGCCTCTTCTGCGGAAGGCACGGCACCTCCGTCAGAGTCGGG
GTCGGCGTCTGACTCGACGGACGCACGCTCTGTGAGGAGATCAAAGAACG
ACGAAGCAGGTGCCGATTATGGTGCTGATCATGTCGGCGAGAAGGCGGCG
GTGACGGCAGCTACGGCGGCTGCGGACCGGGCGGCGGCGGTGGTGGCGGT
GCCGGAGCCAGAGCTTGAGCGATCGCCGCCGTCGGCAGCCCCCGTTGTTG
TCTCGTCGGAGGACGACGGCCCGTCGAGCCCTCTTGCGCCCGTCGCCGCC
GCCGCCGCCGATGATGATGCGCCCGACGTCGTCGAGGCAGGTGCTCCCGC
TGCCACGCCGGCGGCGGCCGCGGCGTTGCCGGCTGCGGTCGGCGAAGCGG
TTGGCGAAGCGGTAGCACCCCCCTCTCCGCCGGAGGCAGACACGGGCGCT
GCTGTCTCAGACCTTGCCGCACGCAATGCTGCTGCCGTCACCCCCGACAA
CCCACCCAAGCCTGAGCAGTCTCATCTGCCGCTGCTGATCCGGCGGCTGA
GAGAGCGGGAGCAAATGTGGAGAGAATCGGGGCAAGCGAACGCGCAGACG
ACAGTTACCGCCGCCGCCGCTGCTGCGGCTAGTGATTCGACTTCGGCAAC
GCGTCGGGACGTCGCGGCGACTCCGCCGGCGGCTGCCGCCGGTGACGCCG
TTCGCCCGGCCGACGACGCGATTGCTATTGCCGATTCGGCAGCTTCCACT
CCGACCATCGCAACCACCGCCGCTAACGTTGTCAAGGCGGAGGTGGGTCC
GGGAGGGACGACGCCGCCGCCGTCGTACGAGACGTTGGTGCTGCCTTCGA
AGGCTGCAGCGGACGCTTCCGACGAGATCGGCTTCGCTGAACAACAGGAG
GAGGCTCCTGGGGTGACTGGCGTCGCTCTTGCAAGTGGCGGTGACACCAC
CGCACCGAAAGAGCAGGAAGACACCGCTAGTGCCGAGCAGGACGCTCCTG
CTACAGAGGGCAAGGCCTCTGGCCCCGCCAAGGAGGAGGAGGGAGAGGAG
GCAGCAGCACCGGGCCTTCCCGACGAGGGCGTGGCCGCAACACAGGTTGA
TGAAGGTGCTGCCGCCTCTTCCCCTGTTGGGGAAGTTGCTACCTTCACCT
CTGCCCCCGTTGAGGATGTCGCAGCACGGACCCCCACGGACGAAGGCATA
GCCGCACCGCAAGCCGATGATGAAGGTGAGGTTGCCGCCACCGTTGCTCC
CGTTGAGAATGGCGATGCCTCCACTCCTCCCTCCGGGAGCCGCGACATCA
TCGACCAGGGCAACGGCAAAGAGGAAGGGGAGAGCGTCAGGGGGCGCGAG
GGAGCATCCGCGGTGTCGGAGCTCGGGTCATCGTCCGCCACGGAGGAGGG
CGCGGAGAAGGATGACAGCGGCGTGCGCCAGGAGGAGTCCGGGGAGCAAC
AAGAGGATGAGTCGAGGGCTGCTGGTGATGATGCGATCAAGGCGGGGAAC
ACAGCCGAGGTGAGCACGCAAGCGGCCGAGAGCCTTCTGCCGTCGCTGCT
GCTGTCCGAGCCAACGGCGGCAGCGAAGGCGGCGGCGTTGCTCGCGGCCG
AGATCGCCGCGGAGAAAGACGCGCAGACGATGGACGGGGGGGGGCGCAAG
GACCAGGCCAAGGCGGCTACGTCTCCCGCTGCCGCTAGTACCGCTACCGC
TGCCGCTGCCGCGCCGGTTACAATCCAGCCGACAGCCGAACGCGTCGCCG
AGATCACCATAAAGCAGGACGAGGAAACCGACACACCAGCACCGGCGGCT
GGCCTTCACATCGCCGCGCCTTTCGCTGACAGGCAGGCGGTGCCCTTTCC
TGCGGCCGCCATTGGGATCACCCCGAAGCAAGAGAAGCAGCTCGCCGCGA
CCGGCCCCACCCTCACCCTGAGCTCCCTCGCGGCCGACGCAGTCGCTGCC
GCCGCCGCGGCGGAGGAGGAGGCCGGCGAGGACGCGGGCGGGAGGAACGA
CCGCGGGGGTGCGTCCGCGGTGTCGGCGCTCACGCTGTCCTCGGCCACGG
ACGACTCCAAGGAGGAGGCAGCTCCTGCTGCCGGTAGTGGCGTAACCCCT
GCGGTGGCGCGAGGGGCTGCTGCTGCTACTCAGCAAGAAGCGGGGGTGTT
TTTTGCGAATTCTGCTGCGAATGCTGCCGAGTCCGAGGACGCGACGAGCC
TGCCCACTCCGACCGCTGCCACACCCAAACGCCGGACTTCTTTCCTAGGA
AGGGCAAAGCGCTCCCTCTCGAGCAAGAAGACGGGCAGCGGCAGCAAGCA
GAAGGATTCTGCCGCCGCCGCCTCCACTTCTCCCGCCGCCAGTGACCTCA
CCGACGAAAAAGCCGCCGCCGCCGCCGCCGCCATCGCCGCGTTGCCGTCT
CTCTCGGCGGCCGCCATCTCGAGCTCCACCACCGCCGCCACCCCGCGCAC
GGTGAGCAGACTCGAATCGTTCCGCAACAAGGCCCGCAGCCTCACCGGCC
GCCTGTCCGCCGGCGGCGGGGGCGGCAGCGGGCCCCTGTCTGCGCGCTTA
GGCGGCGGCAGCGGGCCGACCTCCGGACGCCGGAGCGTCAGCGGACCTCT
GTCTCTGAGCTCGGCCAGGGGCAAGGGAGAGGGATTCTTCTCGATGACGA
CAAGGAGCCCGGAGGAACGGGAGATCCCGGCCAGAGGCGGCGGCGGCAAG
TTCAAGGGACGGAGGGAGCGGGAGGCGATCGCGGAGGGCGCGACCGTTTC
TCCCGACAGCCTCGGGTCTGAGGGCGGGAGCGGGAGCGGCAAAGCGCTCC
CTCTCGAGCAAGAAGACGGGCAGCGGCAGCAAGCAGAAGGATTCTGCCGC
CGCCGCCTCCACTTCTCCCGCCGCCAGTGACCTCACCGACGAAAAAGCCG
CCGCCGCCGCCGCCGCCATCGCCGCGTTGCCGTCTCTCTCGGCGGCCGCC
ATCTCGAGCTCCACCACCGCCGCCACCCCGCGCACGGTGAGCAGACTCGA
ATCGTTCCGCAACAAGGCCCGCAGCCTCACCGGCCGCCTGTCCGCCGGCG
GCGGGGGCGGCAGCGGGCCCCTGTCTGCGCGCTTAGGCGGCGGCAGCGGG
CCGACCTCCGGACGCCGGAGCGTCAGCGGACCTCTGTCTCTGAGCTCGGC
CAGGGGCAAGGGAGAGGGATTCTTCTCGATGACGACAAGGAGCCCGGAGG
AACGGGAGATCCCGGCCAGAGGCGGCGGCGGCAAGTTCAAGGGACGGAGG
GAGCGGGAGGCGATCGCGGAGGGCGCGACCGTTTCTCCCGACAGCCTCGG
GTCTGAGGGCGGGAGCGGGAGC back to top
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