mRNA_C-linearis_contig83.16053.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: D7G7J9_ECTSI (Apt1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J9_ECTSI) HSP 1 Score: 666 bits (1718), Expect = 1.050e-211 Identity = 540/1012 (53.36%), Postives = 594/1012 (58.70%), Query Frame = 1
Query: 2752 MAGVELPDSPLFVGSAVTGGRDGS----------GXXXXXXGFWGLAENSSGVFGGESPSRAKERAARNSLMREAGSSDIASVFSG--TAAAAGSAPFGAGPSGIXXXXXXXXXXXXXXXXXXXXXAMPGPLRRGSLLSGQRAVFKPVVERIDSLELQVLAHHGAVENNVVKVDLPVIQAALNSLQLKLVATVVSEVLASPLPPM-LALFKPPARGGSGGDGDRAPDYYPATQIPGVLVSRKGSNTNDXXXXXXXDAVTDGVAAGAXXXXXXXXXXXXXXXLFPALTVASSWAQQRQADWETLELRR-LRHCIDGAWHGLGAAVPSPPGGPAVXXXXXXXXXXXXTGLARGGKPRPCSLPALRSRANADRLLASPTSPXXXXXXXXXXXXXXXXXXXXDGGAFLSEWATVVD-EEAIASSHRSVSASKLVRKAVRLLKQKLQQRPNTHIVLHLKRLKLELWRDESSTPFLRAEVRRVTADVMVYDDSSGSLDLQVGSMWASQVRGCGYNSAAAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSLFALEVVKPLMRQDLERLSDQGNLRGWSPREITVHVQAQLGSPIGDMTLVRHFEASVFPLVLHLRRSLFADLAAFSSEAVAALSAAGAGADSGATQREEQIKASFLTSRKTXXXXXXXXXXXGKLSRS----SRLRRSWIGKGPSSGAGSCVSAAPPPARDGSTSSIGGPT---AFAGPSTTWDSASDAGESSLLLXXXXXXXXXXXXXXXXXXXXXQEDASGRETDGALAGVMAKPLAVKHLRLGEVNVFLTYLGDRYLELEDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFLNTRALKSGAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNPQPASSFSTTAHAPGAGKKTTTLGRAFSPEFLSGTLGA-VSRSVSPSVRFKRSLSLKGRKLV 5718
MA VELPDSPL + SAVT G G G G+W + + G ESPSRAKERAAR SLMREA + IASVFSG TA + S G G G XXXXXX PLRR SLLSG+RAVFKPVV RI SLELQVLAHHGAVENNVVKVDLPVIQAALNSLQL+LVATVVSEVLASPLPP+ LA+ K A G S T G G ++ + + D A + P TVASSWA QRQADWETLE +R ++ I + R + P AL S +P + W + A RS+ AS+L+RKAVRLLKQKLQQRPNTH+ LHLKRLKLELWRDES+ PFLRAEVRRVTADVMVYDDSSGS+DLQVGS+WASQVRGCGYN A A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +L ALEVVKPLMRQDLERLSDQGNLRGWSPREITVHVQ QLGSPIG++TLVRHFEA+VFPLVLHLRRSLF DL+AFSSEAVAALS+AGA DSGATQREEQIKASFLTSRK K RS SRLRRSW GK SS A S V+ PP A S GG + G + T DSASD G++ + +EDAS R+ D A GVMAKP+AVKHLRLGEVNVFLTY+GDRYLELEDVDNVHLKLHPLVYTNKTWTPRKLL R+RRDVILDVLSQVSRNFNNLGNFLNTR LKSGAAT AG S + + AG KT+ G + P+ LS T G SRS+S S R RSLSLKGRKL+
Sbjct: 1 MAAVELPDSPLSLASAVTSGSGGGREVVGGGVTGGRDSGVGGYWSV-DGPGGRLVEESPSRAKERAARRSLMREADTLGIASVFSGEATARSLSSGTVG-GVDGAAADGIDGGSLGGIAAXXXXXXXXHHPLRRSSLLSGERAVFKPVVNRIGSLELQVLAHHGAVENNVVKVDLPVIQAALNSLQLRLVATVVSEVLASPLPPVVLAMLK--ATGSS-------------TGATGNQDWGSGRRSSAADGGGVAEGMEDDPVAPGSSHGRNWRGMRARAFMRPPPTVASSWATQRQADWETLEGKRWVKERI----------------------------------VPRAARLLPFLCFAL-----------SAMTPVFVR----------------------TRWCALCHLRRARVLCCRSMLASELLRKAVRLLKQKLQQRPNTHLALHLKRLKLELWRDESNAPFLRAEVRRVTADVMVYDDSSGSVDLQVGSLWASQVRGCGYNPAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERGASDWWRAGEGGPADAARAGQ---------QTLMALEVVKPLMRQDLERLSDQGNLRGWSPREITVHVQIQLGSPIGEVTLVRHFEAAVFPLVLHLRRSLFTDLSAFSSEAVAALSSAGA-VDSGATQREEQIKASFLTSRKAKT----------KQGRSGLGRSRLRRSWKGK--SSSATSSVTPGPPAAASAVGSGRGGRARSGSVGGYTATVDSASDVGDAGVDDLLESGRVSQHGSTAAAAVPGAKEDASTRDADEA--GVMAKPMAVKHLRLGEVNVFLTYMGDRYLELEDVDNVHLKLHPLVYTNKTWTPRKLLFRMRRDVILDVLSQVSRNFNNLGNFLNTRVLKSGAATNTSSSTLMGTSAACRRPSSGGGAG--------AGISGLGKSNKQASPSAAAGGKTSGTGTVYLPDLLSETSGGGASRSMSLSPRPGRSLSLKGRKLL 896
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: A0A6H5KUC4_9PHAE (Apt1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC4_9PHAE) HSP 1 Score: 678 bits (1749), Expect = 1.500e-208 Identity = 681/1531 (44.48%), Postives = 750/1531 (48.99%), Query Frame = 1
Query: 1888 LEQGVVQGWVGLDPAEEESVAARLKQGDVVESCRLQCLAQRLLSTFREAVTVGLEGAMLSAAPTDVDVDAGVQWLPDSAFSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFQQDSPSSPTGGXXXXXXXXXXXXXXXMGLGVGGVNAAPKPLEEIAGDSVTGAAAAAAASPHPEATPSTDPAVAVG-GGEPDFTTHRRTPHAHSHVRRPVTV--------PFFGSGEWAAGAFPGHPSPAAAGAAXXXXXXXXXXXXXXXXX-------------ARFGMAGVELPDSPLFVGSAVTGGRDGS----------GXXXXXXGFWGLAENSSGVFGGESPSRAKERAARNSLMREAGSSDIASVFSGTAAAAGSAPFGAGPSGIXXXXXXXXXXXXXXXXXXXXXAMPGPLRRGSLLSGQRAVFKPVVERIDSLELQVLAHHGAVENNVVKVDLPVIQAALNSLQLKLVATVVSEVLASPLPPMLALFKPPARGGSGGDGDRAPDYYPATQIPGVLVSRKGSNTNDXXXXXXXDAVTDGVAAGAXXXXXXXXXXXXXXXLFPALTVASSWAQQRQADWETLELRRLRHCIDGA---------WHGLGAAVPSPPGGPAVXXXXXXXXXXXXTGLARGG-------------------------------------------KPRP---------------------------------------------------CS-------------LPALRSRANADRLL----------------------------ASPTS---------------------------------------------PXXXXXXXXXXXXXXXXXXXXDGGA-FLSEWATVVDEEAIASSHRSVSASKLVRKAVRLLKQKLQQRPNTHIVLHLKRLKLELWRDESSTPFLRAEVRRVTADVMVYDDSSGSLDLQVGSMWASQVRGCGYNSAAAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSLFALEVVKPLMRQDLERLSDQGNLRGWSPREITVHVQAQLGSPIG------DMTLVRHFEASVFPLVLHLRRSLFADLAAFSSEAVAALSAAGAGADSGATQREEQIKASFLTSRKTXXXXXXXXXXXGKLSRSSRLRRSWIGKGPSSGAGSCVSAAPPPARDGSTSSIGGPTAFAGPSTTWDSASDAGESSLLLXXXXXXXXXXXXXXXXXXXXXQEDASGRETDGALAGVMAKPLAVKHLRLGEVNVFLTYLGDRYLELEDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFLNTRALKSGAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNPQPASSFSTTAHAPGAGKKTTTLGRAFSPEFLSGTLGA-VSRSVSPSVRFKRSLSLKGRKLV-RTSAAV----RAETSAGAGGEKGG 5778
+EQGV+QGWVGLDP EE +AA KQGDVVESCRLQCLAQRLL+TFREAVTVGLEG MLSAAPTDVDVDAGVQWLPDSA +P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QD GVG +GD + AAA AAA P A ST PA A+ GE + P +H+RR T PFFGSGEWAAG FP HP P+A A XXXXX ARFGMA VELPDSPL + SAVT G G G G+W + SG ESPSRAKERAAR SLMREA S IASVFS A+AGS +G G A PLRR SLLSG RAVFKPVV RI SLELQVLAHHGAVENNV+KVDLPVIQAALNSLQL+LVATVVSEVLASPLPP++ R +G G+ D+ G ++ + + D A + P TVASSWA QRQADWETLE + C A + + VP + G R G K P CS + +LRS +A +L PT XXXXXXXXXXXXXX DGGA FLSEW VDEEA+ASS RS+ AS+L+RKAVRLLKQKLQQRPNTH+VLHLKRLKLELWRDESSTPFLRAEVRRVTADVMVYDDSSGS+DLQVGS+WASQVRGCGY+ A A XXXXXXXXXX XX +L ALEVVKPL+RQDLERLSDQ S R ++ + G +MTLVRHFEA+VFPLVLHLRRSLF DL+AFSSEAVAALS+AG DSGATQREEQIKASFLTSRKT K RS + DAG LL +EDAS R+ D A GVMAKP+AVKHLRLGEVNVFLTY+GDRYLELEDVDNVHLK+HPLVYTNKTWTPRKLL R+RRDVILDVLSQVSRNFNNLGNFLNTR LKSGAAT XXXXXXXXXXXXXXX XX AG P + + + AG KT G F P+ S T G SRS+S S R SLSLKGRKL+ R S+A A AG GG+ GG
Sbjct: 1 MEQGVIQGWVGLDPVEEGVIAASPKQGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSALAPPHLPASSSSHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------------------QDK-------------------------GVG------------SGDDGSVAAAVAAARLPPSAV-STQPAPALAPSGE------EKAPR-QTHLRRSATTKTTTAAGDPFFGSGEWAAGGFPDHPLPSATAGAPAGPANVESPAAXXXXXXXXXXXXXXXASPARFGMAAVELPDSPLSLSSAVTSGSGGGREVVGGGGTGGRDTGVGGYW-RVDGPSGRLVEESPSRAKERAARRSLMREADSPGIASVFS-IEASAGS--LSSGTVGGVDGAVADGIDGGSLGGIAAAAAAHHPLRRSSLLSGDRAVFKPVVNRIGSLELQVLAHHGAVENNVIKVDLPVIQAALNSLQLRLVATVVSEVLASPLPPVVLAMLKATRSSAGATGNT--DWG------------SGRRSSAADGGGVAEGMEDDPVAPGSSHGRNWRGMGARAFMRPPTTVASSWATQRQADWETLE---MTECTKSAVMLEEELSKFFEIEQGVPQGCTLSSTLFQVFINDLSDVVGTVRKGVKVGDTETSVSGMLFADDLSKFTDKWRLSANVKKSAVMVCNENKEEPVEHRRKWEFEEIAVVDQYTNIGVEIAKDCSKYKVVKELEAAQMKAVKIILGCSKRPSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEESGQNTKRGTQPTEWVKVVEDVWKGFDIDEDETLETEASARGAAEGEGVLWSSSXXXXXXXXXXXXXXXXXXXXGDANGGDGGASFLSEWVNAVDEEALASSRRSMLASELLRKAVRLLKQKLQQRPNTHLVLHLKRLKLELWRDESSTPFLRAEVRRVTADVMVYDDSSGSVDLQVGSLWASQVRGCGYSPAEAAXXXXXXXXXXXXGXXSTPLSPTQTGRQGKKTRGLAAAATKEEGEERGASDWWRAGEWGPADAARAGQ-------QTLMALEVVKPLLRQDLERLSDQARE---SARLVSSRNHCARANKTGVSYRRVEMTLVRHFEAAVFPLVLHLRRSLFTDLSAFSSEAVAALSSAGT-VDSGATQREEQIKASFLTSRKTKT----------KQGRSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXNVGDAGVDDLL--ESGRVSQHGSTAVAAATPGTKEDASTRDADEA--GVMAKPMAVKHLRLGEVNVFLTYMGDRYLELEDVDNVHLKIHPLVYTNKTWTPRKLLFRMRRDVILDVLSQVSRNFNNLGNFLNTRVLKSGAATSXXXXXXXXXXXXXXXPSSGXXAG--------AGISGPGKTNKQASPSAAAGGKTGGTGPVFLPDHFSETPGGGSSRSISLSPRPAPSLSLKGRKLLARNSSATPPRATARAEAGRGGKAGG 1409
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 1.240e-118 Identity = 350/661 (52.95%), Postives = 376/661 (56.88%), Query Frame = 1
Query: 172 AAGGGLASSLPWHQAHGSSGXXXXXXXALSSFDTDGIDLSLSYG------------------ACXXXXXXXXXXXXGPSAEKPLVRTRSARSIWASRGGVPPCLELLPNISHSHDGVLASVGESSGDEGGVESAGGDSLVDGEKKS--ASMPKMGELAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAANSRAGSGRWDEHLLAITRAAWLGSKQASSRGFNSNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSKTVANEQMQKLPSKSSGSLXXXXXXXXXGGFVDRCRAGGGGTAAPVLPPRPRSPVSSATPAXXXXXXXXXXXXXXXXXXXXXXXXGVNAGSVPVSYSA--GAEDGVGEXXXXXXXXXXXXXADGRVAGSGFLYRVVFDGLNVLITLKLRDSLLLLVQSGLDVALATLPGLSKPSGALLAKEREGEVLRGEPHRRTSLDLKQFIDKPLALPGRRRDSGSL---TPFSRPERQSEDSVSVDSFAGGXXXXXXXXXXXXXXXXXTVEGGGVAGPAMHKMFSIELRRTQIQLLGSEAAGATLLFSLEQGVVQGWVGLDPAEEESVAARLKQGDVVESCRLQCLAQRLLSTFREAVTVGLEGAMLSAAPT 2079
A GGGL SS AH ++ LSSFDTDGIDL++ Y XXXXXXXXXX GP +KPLVR RSAR WASRGGVPP LELLP+ SH HDG LA V ESS DEG + DS +KS AS P + E A XXXXXXXXXXXXXX +AAA+ + GSGRWDEHL A+TRAAWLGSKQASSRGFNSNASS XXXXX ANE+ P S G DR R G A P PPR P ++A+P GV+ P S G DG AD RVAGSGFLYRVVFDGLNVLITLKLRDS+LLLVQSGL+VALA LPGL KPS ALLAKEREGEVL GE RRTSLDLKQF DKPLALPGR+RDSGSL TPFS+ ERQSEDS S G XXXXXX GG GPAMHK+FSIELRRTQIQLLGSE A ATLLFS+EQGV+QGWVGLDP EE VAARLKQGDV ES RLQCLAQRLL+TFREAVTVGLEG MLSAAPT
Sbjct: 2720 ARGGGLQSSSLQAHAHAAAAA------GLSSFDTDGIDLAVGYADTAAAIDSRSGNPAXXXXXXXXXXXXXXXXRGGP--KKPLVRGRSARRFWASRGGVPPRLELLPSHSHGHDGALADVDESSADEGTAAAGRHDSPSVRRRKSGDASSPGVEERA------GTRASGDCTASEAPEAGAVAAAAEPGVAADITXXXXXXXXXXXXXXDGDENASAAAHRQVGSGRWDEHLQAVTRAAWLGSKQASSRGFNSNASSVSAASTSNDPTTRIAXXXXXGAAQLSARGAGG---------ANERF--FPRGGRDSCHSARSSRDLGDN-DR-REGAPAGALPTSPPRSPPPAAAASP------------------DTDLGGDGVSRAGTPGGSSRPEGGRDG-------RTTRVAAAAADERVAGSGFLYRVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKEREGEVLPGELRRRTSLDLKQFTDKPLALPGRKRDSGSLGSATPFSKAERQSEDSAY--SLTAGAXXXXXXTRVGAGAPASPSIRGGEGGPAMHKLFSIELRRTQIQLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLKQGDVAESYRLQCLAQRLLTTFREAVTVGLEGTMLSAAPT 3326
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: A0A6H5KJB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB8_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.750e-35 Identity = 193/459 (42.05%), Postives = 212/459 (46.19%), Query Frame = 1
Query: 115 GFIGGGHADSSGYMSNPYYAAGGGLASSLPWHQAHGSSGXXXXXXXALSSFDTDGIDLSLSYG-------------ACXXXXXXXXXXXXGPSAEKPLVRTRSARSIWASRGGVPPCLELLPNISHSHDGVLASVGESSGDEGGVESAGGDSLVDGEKKSASMPKMGELAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAANSRAGSGRWDEHLLAITRAAWLGSKQASSRGFNSNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSKTVANEQMQKLPSKSSGSLXXXXXXXXXG-GFVDRCRAGGGGTAAPVL-PPRPRSPVSSATPAXXXXXXXXXXXXXXXXXXXXXXXXGVNAGSVPVSYSA--GAEDGVGEXXXXXXXXXXXXXADGRVAGSGFLYRVVFDGLNVLITLKLR 1440
GFI GG AD+ YYA GGGL SS AH ++ LSSFDTDGIDL++ Y A GP +KPLVR RSAR WASRGGVPP LELLP+ SH HDG LA V ESS DEG + DS ++K G A +AAA+ + GSGRWDEHL A+TRAAWLGSKQASSRGFNSNASS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + P KS G G VD R G A P+ PP P ++A P GV P S G DG AD RVAGSGFLYRVVFDGLN+LITLKLR
Sbjct: 259 GFIDGGFADN-----GSYYAGGGGLQSSSLQAHAHAAAAVAAG---GLSSFDTDGIDLAVGYADTAAAIDSRSGNPAAAAAAAGCDDHRGGP--KKPLVRGRSARRFWASRGGVPPRLELLPSHSHGHDGALADVDESSADEGTAAAGRHDSPSVRKRKGGYASSRGMEEPASTRASGDGTASEAPKAGAAVAAAEPGVAADITTAAATAGVDGGGDEDGDEN----ASAAAHRQVGSGRWDEHLQAVTRAAWLGSKQASSRGFNSNASSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXSKRFFPPHKSGGGDSCYSARSSRDLGDVDG-REGAPAGALPISSPPSPLPAAAAALP------------------DADVGGDGVTGAGTPGGSSRPEGGSDG------RKTRATAAATADERVAGSGFLYRVVFDGLNLLITLKLR 675
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: A0A835Z2Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Z4_9STRA) HSP 1 Score: 142 bits (357), Expect = 8.310e-30 Identity = 106/318 (33.33%), Postives = 142/318 (44.65%), Query Frame = 1
Query: 1366 RVAGSGFLYRVVFDGLNVLITLKLRDSLLLLVQSGLDVALATLPGLSKPSGALLAKE-----------------------------------------------REGEVLRGEPHRRTSLDLKQFIDKPLALPGRRRDSGSLTPFSRPERQSEDSVSVDSFAGGXXXXXXXXXXXXXXXXXTVEGGG----------------VAGPAMHKMFSIELRRTQIQLLGSEAAGATLLFSLEQGVVQGWVGLDPAEEESVAARLKQGDVVESCRLQCLAQRLLSTFREAVTVGLEGAMLSAAPTDVDVDAGVQWLPDSAFS 2130
RV GS FLYRVV D + +L+T + RD L+LL S D A+A +P L P ALL ++ L G+ R +SLD+ + + + R + +P P + +S GG GGG V GP HK+FSIEL + Q+QLL + + ++++FSLE G VQGWVGLDP A D RLQCLAQRLL+TF E +T+ ++G M+SAAPTDVDV AGV WLP+SA +
Sbjct: 1227 RVDGSTFLYRVVIDRVCILVTPEQRDRLILLGMSAYDRAVAAIPELQHPPAALLVPSPWETAAGAGTGGAGGTVGVPDALSASAXXXXXXXXXXXXXXXXASLAQQEAALWGK--RNSSLDMYEALSSAATVAWRADQAPESSPL--PSAYAAYGAESESGGGGSAPLSPRQGGVSSAFLLPARGGGGQGEGDEAAAAGSDDGVNGPN-HKLFSIELHQLQMQLLDEDVSKSSVIFSLEHGAVQGWVGLDPGAPPCAA------DAQRRRRLQCLAQRLLTTFEETITIAVQGVMISAAPTDVDVGAGVTWLPESALT 1533
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: A0A7S1U1N3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1N3_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.040e-16 Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 5167 LAVKHLRLGEVNVFLTYLGDRYLELEDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFLNTR---ALKSGAA 5427
+ +K LR GE+N+FL+Y GD +LE +++HLK+HPLVY+ +T T KLL +IR D+I+D+L QV RNFNN+G ++ R L +GAA
Sbjct: 134 ITIKRLRFGELNLFLSYKGDTKSDLETFESLHLKVHPLVYSKRTCTLDKLLFQIRNDLIMDLLGQVHRNFNNIGTLISQRLGFGLTAGAA 223
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: I2CQJ8_NANGC (Apt1 domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQJ8_NANGC) HSP 1 Score: 85.1 bits (209), Expect = 4.580e-16 Identity = 41/79 (51.90%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 5191 GEVNVFLTYLGDRYLELEDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFLNTRALKSGAA 5427
GE+N+F +Y G + LED++++HLK+HP++YTNKT + R+LL+R+R+DV+LD+L QV+RNF NLG +L +L G A
Sbjct: 1 GEINIFFSYSG-KGGNLEDLEHLHLKVHPIIYTNKTLSARELLARLRKDVVLDLLKQVNRNFANLGAWLRV-SLAGGQA 77
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: A0A5D6XXY0_9STRA (Apt1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXY0_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.970e-15 Identity = 95/291 (32.65%), Postives = 142/291 (48.80%), Query Frame = 1
Query: 4555 WSPREITVHVQAQLGSPIGDMTLVRHFEASVFPLVLHLRRSLFADLAAFSSEAVAALSAAGAGADSGATQREEQIKASFLTSRKTXXXXXXXXXXXGKLSRSSRLRRS-----WIGKGPSSGAGSCVSAAPPPARDGSTSSIGGPTAFAGPSTTWDSASDAGESSLLLXXXXXXXXXXXXXXXXXXXXXQEDASGRETDGALAGVMAKPLAVKHLRLGEVNVFLTYLGDRYLE-----LEDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFL 5397
W + V V +++ +P+G +T+V+HFE +V PL + + + + L AF A+ SA +R ++++++FL +R L R++++ GK GAGS A R S S+ P+ S+ + + A E+ LL XXXXXXXXX + + RE GA G + KH+R+G V V +TY + + LED+ +K+H LVY +KT + L RIRRDVILDVLSQV RNF N+ NFL
Sbjct: 1958 WGGGDAIVWVDSEIAAPVGGVTVVKHFEVNVHPLQVCITQEVVLHLVAFFGPPAASRSA---------QERHDEVRSTFLQARHAGAASDGLVGSA--LKRAAKVAEKAAHPLGFGKSHRDGAGSARGAR----RTRSFSTTHDPS-----SSLASAVTHANETQLLXXXXXXXXXXAPPSFL-------DAFADREASGA-KGRATPTILFKHIRIGTVEVVVTYKNKKSHQHNQQPLEDMRGFEIKVHALVYCDKTCSMLDLALRIRRDVILDVLSQVGRNFTNIANFL 2220
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: H3GL85_PHYRM (Apt1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GL85_PHYRM) HSP 1 Score: 82.0 bits (201), Expect = 5.420e-12 Identity = 81/307 (26.38%), Postives = 125/307 (40.72%), Query Frame = 1
Query: 4549 RGWSPREITVHVQAQLGSPIGDMTLVRHFEASVFPLVLHLRRSLFADLAAFSSEAVAALSAAGAGADSGATQREEQIKASFLTSRKTXXXXXXXXXXXGKLSRSSRLRRSWIGKGPSSGAGSCVSAAPPPARDGSTSSIGGPTAFAGPS------TTWDSASDAGESSLLLXXXXXXXXXXXXXXXXXXXXXQEDASGRETDGALAGVMAKPLAVKHLRLGEVNVFLTYLGDR---------YLEL---------EDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFL 5397
R W ++ + V A++ P+G +T+V+HFE +V P+ + + + + L F S + A +S ++ E++++ FL +R T SS +G AA P G T I F S + D + L Q +++ RE + + K +RLG V V LTY + +L L ED+ +K H LVY++KT +P LL R+RRD++LDVLSQV RNF N+GNFL
Sbjct: 122 RSWEGDDMFLRVDAEIAKPVGGITVVQHFEVNVHPIQVCITQEVIMQLVTFFSPSDRA--------NSTKEEQREEVRSQFLQARTT----------------SSSTSDGRVGSAIIKAVKVAGKAAAHPLSLGRTHRIDSDEEFLPSSRKARGGALHNIPEDPSQWMAKLANLSEQNELHLFASASEGEQHQTESTERELS-EMKDRAKNSILFKRIRLGAVEVVLTYKNKKSNAGSSSTPHLHLPHATQPQALEDMRGFEVKTHALVYSDKTCSPMDLLLRMRRDILLDVLSQVGRNFTNIGNFL 403
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Match: A0A485LBR3_9STRA (Aste57867_19007 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBR3_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.150e-12 Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 5167 LAVKHLRLGEVNVFLTYLGDRYL----ELEDVDNVHLKLHPLVYTNKTWTPRKLLSRIRRDVILDVLSQVSRNFNNLGNFLNTR 5406
+ KH+RLG V V LTY + LE++ LKLH LVYT+KT T LL R+RRD++LD+LSQV RNFNN+G FL R
Sbjct: 2099 MTFKHIRLGTVLVLLTYKSGKSAVTPQHLEEMRGFELKLHSLVYTDKTCTVSDLLLRVRRDILLDILSQVGRNFNNIGVFLKER 2182 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig83.16053.1 >prot_C-linearis_contig83.16053.1 ID=prot_C-linearis_contig83.16053.1|Name=mRNA_C-linearis_contig83.16053.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1949bp GGGGGFDLGGGHGGVVISDSSSSGGSDDSDGDSDGSRFGFIGGGHADSSGback to top mRNA from alignment at C-linearis_contig83:353719..378247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig83.16053.1 ID=mRNA_C-linearis_contig83.16053.1|Name=mRNA_C-linearis_contig83.16053.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=24529bp|location=Sequence derived from alignment at C-linearis_contig83:353719..378247- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig83:353719..378247- >mRNA_C-linearis_contig83.16053.1 ID=mRNA_C-linearis_contig83.16053.1|Name=mRNA_C-linearis_contig83.16053.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=11694bp|location=Sequence derived from alignment at C-linearis_contig83:353719..378247- (Chordaria linearis ClinC8C monoicous)back to top |