mRNA_C-linearis_contig82.16028.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig82.16028.1
Unique NamemRNA_C-linearis_contig82.16028.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 8.980e-143
Identity = 233/325 (71.69%), Postives = 264/325 (81.23%), Query Frame = 2 
Query:  137 RGNVS---VHVVLLLVCCVQSSNGFVAFARSGRVSP-LSRGCLHKTLACTADDLHKREGRGGWRHAGLVRRRSGYP---LRATEEGG-TEEEEDTLELTKGFYSEIAARLGKTPGETAKIEVEEDSQQADTDTDKDDSGSQIDKAIYDELRARRDFGFEQDLGLELEKRNITKEAEVTKIVDAGLDQMPGVSSSTTFLPTPELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEL 1087
            +GN++   +HV+LLL CCVQ S+GF+A      VSP   RGC  +TL+ T +DLHKRE RG  RH  L+RRRSG P   L+A E GG  EEE+DTLELTKGFYSEIAARLGKT     +     DSQ+   D   +DSGS       DELRARRDFGFEQDLGLELEKRNITKEAE  KI+DAGL+QMPGV+SS TFLP+ ELTPREVVTSVLEALKNND PYHNHGVEVF+RFL+PSSAM+GVEM+GVARYLAENRNRAFM W+ +A+PRPLT+SGGAKQNKAFQP+KL+DTMTGAWHSVSVYLTLDARSNCWLIESCIVKGE+
Sbjct:    4 QGNLAAGGLHVLLLLCCCVQWSHGFIA------VSPCFRRGCSQQTLSST-NDLHKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQ-----DSQETAKD---EDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313
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BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.370e-12
Identity = 67/248 (27.02%), Postives = 118/248 (47.58%), Query Frame = 2 
Query:  413 GFYSEIAARLGKTPGETAKIEVEEDSQQADTDTDKDDSGSQI--DKAIYDELRARRDFGFEQDLGL----ELEKRNITKEAEVTKIV--------------DAGLDQMPGVSSSTTFLPTPELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARY---LAENRNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTLDARSN----CWLIESCIV 1075
            G    +AA  G +         + D  +   ++ K+  G Q+  +K IY+ LR R  FG E++        +E +N+T + + ++ +              +A   Q+P +   T+  P P LTP  VV S+L+A++ ND PY NHG+EV  RF S +S+    +     +Y   + ++     ++WDAI + +PL  +G     KA Q ++L+   +  W  V+V   L  R+      WL++S ++
Sbjct:   30 GLRLRLAASAGPSEARNGTDSADSDFTREFFESVKEREGGQLTEEKDIYNALRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTS--PDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLI 268
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BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S3WL80_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL80_EMIHU)

HSP 1 Score: 65.9 bits (159), Expect = 3.860e-9
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 2 
Query:  695 TTFLPTPELTPREVVTSVLEAL--KNNDHPYHNHGVEVFMRFLSPSSA--MYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLT-LSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTL 1033
            T   P+  L+PREV+TSV+E+L   N D P   +G EV MRFL+P+ A  +   +  G +RYL +     F++W+   +   +  L+G     +AFQ + L+ + T  W S   +L L
Sbjct:   25 TNLKPSAALSPREVITSVMESLHRSNWDRPTECYGFEVAMRFLAPTHAAKLKKAKPTGFSRYLRQQHRIRFVKWNEYRFEGDVARLTGDDGVEEAFQMISLRSSPTAEWCSARFHLVL 142
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BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S2A8Z1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z1_TRICV)

HSP 1 Score: 55.5 bits (132), Expect = 1.350e-5
Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 2 
Query:  713 PELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMY------GVEMAGVARYLAENRNRA-FMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTLDARSN----CWLIESCIVKGEL*REHR 1102
            PELT  EVVT+V+ ALKNN+ P  N+GV+V   + SP SA+       G+     A +L ++  +  F   D +      +      + KAF   +L+    G    VSV   L    N    CWL++S +++ E  R  R
Sbjct:    1 PELTAGEVVTTVVAALKNNNDPSPNYGVQVLFGYSSPGSAVMSAVRDEGMTPEEYADFLEDSEYKVLFEHEDCVIDKGDYSFD----RKKAFYNARLR-VGPGPLDFVSVNFILSTNGNEEDDCWLVDSMLIRPEKMRRRR 136
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BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.130e-5
Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 2 
Query:  704 LPTPELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLTLSGGAKQNK--AFQPLKLKDTMTGAWHSVSVYLTLDARSNCWLIESCIVK 1078
            +P  ELT  EVVT VLEAL+NND+P  N GVE+   + S +S +  +E A       E    +  +   + +   L       Q+K  AF  ++L D M     SV+  L+  +  +CWLI+S +V+
Sbjct:  243 VPDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVLFDKADYSQDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368
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BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S2IBG5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IBG5_9EUKA)

HSP 1 Score: 54.7 bits (130), Expect = 5.310e-5
Identity = 37/129 (28.68%), Postives = 65/129 (50.39%), Query Frame = 2 
Query:  707 PTPELTPREVVTSVLEAL--KNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVS---VYLTLDARSNCWLIESCIVK 1078
            P+P L PREV++++L AL   N DHP    G EV +RFL+PS+          A YL++   +  + W    +   +TL G   +++A+Q + ++      W +V    V +     ++ W+I +  V+
Sbjct:   52 PSPALQPREVISTMLNALHRSNFDHPRSRFGCEVALRFLAPSNPASRATPQLFATYLSQTWYQPLLDWAEYRWEGDITLLG---ESEAYQQIGVRSAPDEPWVAVRWILVRVPFYGTTDQWMIGAVFVE 177
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FII9_ECTSI8.980e-14371.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YD20_9STRA1.370e-1227.02Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3WL80_EMIHU3.860e-934.75Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S2A8Z1_TRICV1.350e-531.91Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0K9M8_9STRA3.130e-533.86Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2IBG5_9EUKA5.310e-528.68Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:760221..766536 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-28_000440.1
Exons7
Model size1789
Cds size960
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930618.1231115-UTR-C-linearis_contig82:760220..7603501622930618.1231115-UTR-C-linearis_contig82:760220..760350Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 760221..760350 +
1690881162.1398141-UTR-C-linearis_contig82:760220..7603501690881162.1398141-UTR-C-linearis_contig82:760220..760350Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 760221..760350 +
1622930618.2696996-UTR-C-linearis_contig82:765837..7665361622930618.2696996-UTR-C-linearis_contig82:765837..766536Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 765838..766536 +
1690881162.2290695-UTR-C-linearis_contig82:765837..7665361690881162.2290695-UTR-C-linearis_contig82:765837..766536Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 765838..766536 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930618.1375608-CDS-C-linearis_contig82:760350..7604631622930618.1375608-CDS-C-linearis_contig82:760350..760463Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 760351..760463 +
1690881162.1527712-CDS-C-linearis_contig82:760350..7604631690881162.1527712-CDS-C-linearis_contig82:760350..760463Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 760351..760463 +
1622930618.1600702-CDS-C-linearis_contig82:762457..7626411622930618.1600702-CDS-C-linearis_contig82:762457..762641Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 762458..762641 +
1690881162.1699326-CDS-C-linearis_contig82:762457..7626411690881162.1699326-CDS-C-linearis_contig82:762457..762641Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 762458..762641 +
1622930618.1859024-CDS-C-linearis_contig82:763038..7633441622930618.1859024-CDS-C-linearis_contig82:763038..763344Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 763039..763344 +
1690881162.1814566-CDS-C-linearis_contig82:763038..7633441690881162.1814566-CDS-C-linearis_contig82:763038..763344Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 763039..763344 +
1622930618.20236-CDS-C-linearis_contig82:763638..7637041622930618.20236-CDS-C-linearis_contig82:763638..763704Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 763639..763704 +
1690881162.1902325-CDS-C-linearis_contig82:763638..7637041690881162.1902325-CDS-C-linearis_contig82:763638..763704Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 763639..763704 +
1622930618.2280047-CDS-C-linearis_contig82:764646..7647711622930618.2280047-CDS-C-linearis_contig82:764646..764771Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 764647..764771 +
1690881162.1992736-CDS-C-linearis_contig82:764646..7647711690881162.1992736-CDS-C-linearis_contig82:764646..764771Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 764647..764771 +
1622930618.2436302-CDS-C-linearis_contig82:765122..7651881622930618.2436302-CDS-C-linearis_contig82:765122..765188Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 765123..765188 +
1690881162.2090647-CDS-C-linearis_contig82:765122..7651881690881162.2090647-CDS-C-linearis_contig82:765122..765188Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 765123..765188 +
1622930618.2551215-CDS-C-linearis_contig82:765737..7658371622930618.2551215-CDS-C-linearis_contig82:765737..765837Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 765738..765837 +
1690881162.2200859-CDS-C-linearis_contig82:765737..7658371690881162.2200859-CDS-C-linearis_contig82:765737..765837Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 765738..765837 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16028.1prot_C-linearis_contig82.16028.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig82 760351..765837 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig82.16028.1

>prot_C-linearis_contig82.16028.1 ID=prot_C-linearis_contig82.16028.1|Name=mRNA_C-linearis_contig82.16028.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=320bp
MLRGNVSVHVVLLLVCCVQSSNGFVAFARSGRVSPLSRGCLHKTLACTAD
DLHKREGRGGWRHAGLVRRRSGYPLRATEEGGTEEEEDTLELTKGFYSEI
AARLGKTPGETAKIEVEEDSQQADTDTDKDDSGSQIDKAIYDELRARRDF
GFEQDLGLELEKRNITKEAEVTKIVDAGLDQMPGVSSSTTFLPTPELTPR
EVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAEN
RNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLT
LDARSNCWLIESCIVKGEL*
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mRNA from alignment at C-linearis_contig82:760221..766536+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig82.16028.1 ID=mRNA_C-linearis_contig82.16028.1|Name=mRNA_C-linearis_contig82.16028.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6316bp|location=Sequence derived from alignment at C-linearis_contig82:760221..766536+ (Chordaria linearis ClinC8C monoicous)
AGTGAATTGCACCGTGCGTAGAAACGAGCAAGAGAGCGTACAGGAGTGGT
GGGCGAACTTGGCGGCGGCTAGTCCCTCTAGTCTTTCACAGGAAGCCAAG
AACTGCTGCGGGAGCGGTCTAATTTGCAACATGCTGCGAGGAAATGTTAG
TGTTCATGTTGTGCTTCTCCTCGTCTGCTGTGTGCAGTCGAGCAACGGGT
TTGTCGCCTTCGCCCGGAGTGGCCGCGTATCACCACTTTCAAGGTGAGAC
AGAGAGTGCCAGACACAAGCATTTCGCTGGTCAGAGTACCGATGGCTTAC
TGATTTTGTGCTGTGTGGATGAATTTAGTTTGGTGTAAGGGGACCGCCGT
GGGACCCTCAACCCCCCGCCCTCGTTCTGCACTTCAAGCGTTTGTGTCTC
TACCCGCACCCGTCGCCAGCACTCGCGCCCCCCATCAGTAGGCAGTGCTG
TTGTCGTATCTTTGGGGAAAGTTGCAAGTGGGGTGCATCAGATCGATGCC
GGCCTTTCTTGCGAGACTCGAAACTTGCGGGCTGTAAGGGAGAGCCAGCG
CGCTTCAGATCACTACATACAATGAAAGCAGCATACCTGGTACAGAGTAG
ACTACGATGTACATGAGAGCAGCAAGCTCTCTAGCCGCCGCCGGACATCA
CAGACATATGTACCACCGGTAGCAGGACAGGTCGTAGCCACATGTTTTTC
CTCTCGAGGTTGTGGAGATTGCGTGTGTGGGCAGCATAGGAGGTGACCGA
AGAAGGCGTGTCCCTGAACGCGTGTCCAACCACGTGTCAACAGAGTCAGG
CTTGTTCTTTTCTATAAATCGATACGGCATCAAAGAAAAAACGAAAGAAC
CTCCCCTCAAAGAGACAAATCCCTAAGTGGTGGATTAGCAGTTCAATACA
GCAGTGACGTAATATGGGATAGGTGGGGAAGAAAAACAACTAAAATTGGG
AAAACGTCATAGACCTCCCCTGCAACGCTCTGCCGGATCAACAGCAAATA
TGTCGGGGAGAAACCCACCGTAAAGCTGTGGTATTATAACCAATTTCTCG
GAGATACATTAGGAACATATCGCAGGGGTTAACATCGTCAAGTTGCTAGT
TTAGTGATAAGAGCTGCTGTGGTGAACTATTGGCGAGTGAACAAGACTTC
GGGTGGAGGGAGACTGCCAGATATTTTCAAGGGGGGGGGTGGTACCTAAC
GTCATTAGTTAGAGGTGGCAAAAAATATATTTTATAAATCAAAACGGAGA
TCTTTGTTTGAGAAACATCAACTTTGGGTTGGCCACCTTTCCATGTGTGT
GTGAGTAGAAACCGAGGAGGGAACGAAAGGTGCAGTCAAGGGATAAGGGT
TCAGGTGTTGTGTGGAAGAGAGCGTAAGTGCCCTAGGATAAGTGTAGAGG
TCATCATGTCGAACAGCAGTAGCGATCAGCAGCTGCTGTAGGTGTTATGC
ACGCAAGTTTGAGAACAGCAGTTCGAGTGGAGTCAGAAGAGGACGGGCGT
GGAAAAGAGCGAAGTAGGTGCAAAACCTAAGCCACACGATCCACCCCAAA
GGCACAAAGGGAGCTCGCTAAGGTCTACCACAATGGCAGGTACCCAAGCC
AGACGCTCAATACAGAAGGGGGGAGGACCAGAGCAGCAATGGACACCACA
ATCGCAATTTTCAAAAACGGGGGGATAACCATGATGATATCCGGGGGAGT
GATGCCGATGAAGGTGTGGAAACCTGAAGCGGGACGTTTCTCGCAGAATG
TTTTCGAAGATTGGTCGGAGTAGACCTGTATCCGAGCCAATCCCTCCACG
GGAGGTTAGTTGAGACATGTCAAGCTTGTTGTCTCGAAGTGCAGGGTTTG
TAGAAGGTGTACTGCTGCTAGGTGAAGTTTCGAGCCATTTGAATTAGACA
ATTTGCTTTTGCAGTTTTACAAGGGACACATAGAGATGGTGTTCCCCCTT
CCTTTCATTTCGAATAGCCTTGCCTTCATGCTGTGCATGTAGCAGACTAC
TCCGACTTGGAAATCAATGACGATTTCCAGGTCACGAATATAGGGAAGAC
AGAGGAGTGAGTGACTTTGAATTGAGCAAGGACAAGATCTTCTAGTACAG
CCGTTTCCTACTGAATTTTCAACTTGTTTTTTTCGCACATGGTGCTCTCT
TGCGTTTGTGTGCTCGCACTCGAAGCAGACGTGTTTTTTTCGTGCTGCTC
ATGTCTGCTTTGTACCGTGCGCGAAACCCCGCGGCAGGGGTTGCTTGCAC
AAGACGCTTGCGTGCACTGCCGACGACTTGCACAAGAGAGAGGGCCGCGG
GGGCTGGAGACACGCCGGGCTCGTCCGGCGGCGGTCCGGCTATCCTCTCC
GGGCAACCGAGGAAGGGGGCACGGAGGAGGAAGAGGACACGCTAGAGCTA
ACTAAGGGTTTCTACAGCGAGGTGAGGGGCGGGCAGGGCAGGCACATGTT
TCCTACGGACTTTGTTTCGTTCTCAAAATACTCCTCCGGGTTTCAGGCGG
GTTTCGTCTTTTCGCCTTGCTGTCGCGCTAGAGCTCGCTCACTCCGCTAC
AGCAGTAGTTATGCTCCCACCGTTTGCGTCTTTGATACCACGTGCCGAAC
ACTTCGGCATGAACGCAGGATCAGATACCAGGTATGTGGTTTCACCGGAT
GCAGCAAAAAAGCTGTTTGCGTGCCACTACTGCTGTGTGCTTGTACCTCA
GCTGCTACGCACGCCCATACACTTGCATTTTCTGTCGTTTGAGAGCAAAT
CGAGTGTCGCTCTGGAACATCGTCGTAACCGCTCAGTTTATGTGCAAACC
ACACCGCCGTTGCAACAGATCGCGGCGCGCCTCGGCAAGACTCCCGGGGA
AACAGCAAAGATCGAGGTCGAGGAGGATAGCCAACAAGCCGACACAGACA
CAGACAAAGACGATAGCGGTAGCCAGATCGACAAGGCGATCTACGACGAG
CTGCGAGCAAGGCGAGACTTCGGCTTCGAGCAGGACCTGGGACTGGAGCT
GGAGAAGCGCAACATCACGAAGGAGGCGGAGGTGACGAAGATCGTCGACG
CCGGCTTGGACCAGATGCCCGGGGTCTCGAGCTCTACCACGTTCCTGCCG
ACCCCCGAGCTCACGCCGCGAGAGGTGAGGGGTAAGGGGACGCCGGCCGC
ATGGCATGGGTCCGCGTTTTGGTGTTGGTGTTGGTGCTGGTGTTGGTGTG
GTGGTGGCATGCCTCCGTTCGTTCAACCGCTGCGTTCTTTTCGAGAGCCT
GGCTGTACTCGAGGAGGGCGAGGGCTTGTTTTGTTTCGGTCGAAGAGATG
CGGTAATTTCGTAATTTCCAGGTAATTGCCAGGCACGCGCTAATCTACTT
TTGTTTTTTTCGTTCGGCTGGCTGACTGAGGTTGACGTTTTGTTTTTATT
TTTCTTGCCTGCTTTCAGGTGGTGACCTCGGTGCTAGAGGCGTTGAAGAA
CAACGATCACCCGTACCACAACCACGGCGTCGAGGTGAGGTTACATAGCA
GCCAAATGCACGTCTTTAACCGAAGCCGTCGACATGGAAGCCGCGCACAT
CTGCGACAGCGAAACCGCTCCAACCAAGCAGCCGATGCCTAGTACAAGCT
GGGTCGACCAAGGCACACATACACAAAATGGCGGGATGCGATTTCCCACG
CGGTTTTTTCGACTGGGAAATAGAGATATTCTCACACTTGCTCAGTAACT
TGTGTTGGAATCTTTACAAGGCCATAAATCTGGACAGAAGATGACCTGGG
CTACAAAAGTTCTTTCCAACCTCTCGTGATGCTCCCAGGTGCGCACACAC
CAACTTTCAGATCGATTCGTGACACTTTTTTTGGTATCAATTTCAGCATA
CTAGACACTTCACAACCACGCCGCCAATTGATCCATTGTTTCGCAAATCA
AATCGGACACGAAAAATTCCGGCACGGGCACCTCCACTTATTGTCGAAAG
AAAAGCAGGCACCAAGTTTCAAGCCTAAACCCGTGAAAAAACGGCAGAGC
TAGACCCGAACGAACGAAAGTGAGCTGCTAGGTCACTCCAGCTTGTAGGT
TCTGCGAGGGGATGTGCTCTGTCGGGCGGCCGTCCTTCGTCAAGCACGGG
AATAATGCACTGGCACGTGCTTGCTCGGTTGGCGGTAGGGAGCAGCGCGG
TAGAACTGACGTGGGCCCCGTGTAACTGCTGCGGGCCCGAAGGGCCCCAT
GGCATGGTGATCGATTATTTTCTGCATGCATACAGCAGTAGTGTGGCTGT
TCTGTTTAGTCGCGATCCCGGTTCACCCTCAAACCTCCAAGGGCATGCAA
GTATGACCCATTTCGTCGAGAACCCAGCAGTAGACCACGGCGGTGAACCA
CAAGGTCGTTTCGCCTGCCAGTATTTGTTGCATGACGATGTCCCCCGCTC
GATCTCCTGCGTTGCACCACCGACAGGTTTTCATGAGGTTCTTGTCTCCC
TCTAGCGCGATGTACGGGGTGGAGATGGCAGGCGTGGCGAGATACCTGGC
GGAGAACCGGAACCGTGCCTTCATGCGCTGGGACGCCATCGCCTACCCCA
GGTCGGTTTCGAGTCTGCGTTTTTTTTTTTTCTTCATCTTCTTTTTCTTC
GTTTGTTTGTGCTACAGTAAACGCGTTTGTTTTCCCACGAGAAGTGAGCG
CGGCTGGAAACCCTGAGACAATTTTCGCGTACGGAACGGGTGCCTCTGGC
CCATCCACTGCAGAAAATTTTGTTTATTGTCAAGGGGCAGCTTGCCTGAA
CGTCACGTCTCGCGTATAGTGGAGCCGCAACAGCGGGGTCGAATCCGTGT
TGTAGTGTGGCAACCTGACACTTTTTGCCCCCTACGGCCGCCCGTGCTCG
TTTGTGCGTCTGTGTCCCGTCTGCCCCGGTGTTCGCGATCTTTCACTCGC
AGACCGCTGACGCTGTCTGGAGGAGCGAAGCAAAACAAGGCCTTCCAGCC
TCTCAAGCTCAAAGACACGTGAGTTTCCGCGATCTACGGCGCCAGACGCG
TACCCGCCTGACCTTCTCTGTATGCTTTGCCGCGGGAGTTCTCCTTTGGC
GCTGTTGTGGTATGTTGTAACCGTCCGGTCGGGGGTCATGCCAACGTCAG
TAAGGGGATTTAGCGTCGCGTAGGGGCCACGAACGATCCCGGGGTCGAGT
TTTGGCGGTCGTAAACCTTCTTGCTCGGTCACAGCTGCCGCTTTGCGAAC
TACACTTTTCCTCACCCACGACATGTTACCTGGCCCGCACGTGCAAGCAA
AAATTCCAGGAGGACGGGGGCGAAAAGCCTGGACGGCTCGCACGGCATGA
GGTGTCCGTCCGTCCCTTACGTCAATCGTTTTTGTGGCCTAGGAAAAAAC
ACGGCAGTCAGTGAACCATCTCCCTTCGTGAATGAGACGCCAGGGAGCGG
ACCCCCCCCCCCCCTCTGAAAACAAACCCGATCGAAGGTGTGCGTGCATG
CACCTCGTGTGTAACTCTCTAACCAACGAAACTGCCTGCCTTTTGCGTCG
CGCTCATCGTTCTACAGCATGACGGGCGCTTGGCATTCGGTGAGCGTCTA
CCTCACTCTCGACGCACGGAGCAACTGCTGGCTCATCGAATCTTGCATTG
TCAAGGGCGAATTGTGAAGGGAGCACCGCGCCAACCACACACACGCGTCC
TCCTTGGCTCTTTGTGGGGATCAGATGTGCGCTGGTTTCGGAAAAAAATG
GACGCGACATTTACTTCAATGTTGTACCTTTGAAAGGTAGCAACGCTGGG
CGCCCAGGAGGGCAAATAAGGTCATCGCCGTGGAATGGGGGAATGGTTGC
TTTGGGCACAGGAGGGACTCGTACTTGTCGTTCAGAAGCAATGGGGCGCA
CGCAGTGATTCGAGTCGGTATTTCCAGGGGGGGGGCGAGGCGGAAGACGT
TTCGTTATTTGTTTTAGGGTGAGCGGTCGATTTGCGCGGTGGTGCAACCG
TCTTGACTGTTGACGTAGAACAGCCTTTGCGCGGCTCTGTCGTGTTGGGC
TGGGGACGATGTTATTACCCCGACCTGACACGAATGGAGATGCTCTTGTA
CATACAATGAAACAGTAGTAGGGCGTGCGTAGAAGCGCGTTCGTTCCAAG
TCGTGTACTTCTATGTTTTCGCGGTTGCCATGCGTGGCTGGCAACATATC
GCATCATATCACGAGCGACAGAAGGGGTCTACATGCAGCTCCAGGACGAA
CCATCTCTCGCGCAGCGGGAAAAAGTGCTGACATGTTCTTGGGACGCCGC
TAAATTTAACAGGCATACTTGAAGTATTGAGCCAGCGGCGGACGAATGTG
CGCGATCTCTCTCTCT
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Coding sequence (CDS) from alignment at C-linearis_contig82:760221..766536+

>mRNA_C-linearis_contig82.16028.1 ID=mRNA_C-linearis_contig82.16028.1|Name=mRNA_C-linearis_contig82.16028.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at C-linearis_contig82:760221..766536+ (Chordaria linearis ClinC8C monoicous)
ATGCTGCGAGGAAATGTTAGTGTTCATGTTGTGCTTCTCCTCGTCTGCTG
TGTGCAGTCGAGCAACGGGTTTGTCGCCTTCGCCCGGAGTGGCCGCGTAT
CACCACTTTCAAGATGCTGCGAGGAAATGTTAGTGTTCATGTTGTGCTTC
TCCTCGTCTGCTGTGTGCAGTCGAGCAACGGGTTTGTCGCCTTCGCCCGG
AGTGGCCGCGTATCACCACTTTCAAGGGGTTGCTTGCACAAGACGCTTGC
GTGCACTGCCGACGACTTGCACAAGAGAGAGGGCCGCGGGGGCTGGAGAC
ACGCCGGGCTCGTCCGGCGGCGGTCCGGCTATCCTCTCCGGGCAACCGAG
GAAGGGGGCACGGAGGAGGAAGAGGACACGCTAGAGCTAACTAAGGGTTT
CTACAGCGAGGGGTTGCTTGCACAAGACGCTTGCGTGCACTGCCGACGAC
TTGCACAAGAGAGAGGGCCGCGGGGGCTGGAGACACGCCGGGCTCGTCCG
GCGGCGGTCCGGCTATCCTCTCCGGGCAACCGAGGAAGGGGGCACGGAGG
AGGAAGAGGACACGCTAGAGCTAACTAAGGGTTTCTACAGCGAGATCGCG
GCGCGCCTCGGCAAGACTCCCGGGGAAACAGCAAAGATCGAGGTCGAGGA
GGATAGCCAACAAGCCGACACAGACACAGACAAAGACGATAGCGGTAGCC
AGATCGACAAGGCGATCTACGACGAGCTGCGAGCAAGGCGAGACTTCGGC
TTCGAGCAGGACCTGGGACTGGAGCTGGAGAAGCGCAACATCACGAAGGA
GGCGGAGGTGACGAAGATCGTCGACGCCGGCTTGGACCAGATGCCCGGGG
TCTCGAGCTCTACCACGTTCCTGCCGACCCCCGAGCTCACGCCGCGAGAG
ATCGCGGCGCGCCTCGGCAAGACTCCCGGGGAAACAGCAAAGATCGAGGT
CGAGGAGGATAGCCAACAAGCCGACACAGACACAGACAAAGACGATAGCG
GTAGCCAGATCGACAAGGCGATCTACGACGAGCTGCGAGCAAGGCGAGAC
TTCGGCTTCGAGCAGGACCTGGGACTGGAGCTGGAGAAGCGCAACATCAC
GAAGGAGGCGGAGGTGACGAAGATCGTCGACGCCGGCTTGGACCAGATGC
CCGGGGTCTCGAGCTCTACCACGTTCCTGCCGACCCCCGAGCTCACGCCG
CGAGAGGTGGTGACCTCGGTGCTAGAGGCGTTGAAGAACAACGATCACCC
GTACCACAACCACGGCGTCGAGGTGGTGACCTCGGTGCTAGAGGCGTTGA
AGAACAACGATCACCCGTACCACAACCACGGCGTCGAGGTTTTCATGAGG
TTCTTGTCTCCCTCTAGCGCGATGTACGGGGTGGAGATGGCAGGCGTGGC
GAGATACCTGGCGGAGAACCGGAACCGTGCCTTCATGCGCTGGGACGCCA
TCGCCTACCCCAGGTTTTCATGAGGTTCTTGTCTCCCTCTAGCGCGATGT
ACGGGGTGGAGATGGCAGGCGTGGCGAGATACCTGGCGGAGAACCGGAAC
CGTGCCTTCATGCGCTGGGACGCCATCGCCTACCCCAGACCGCTGACGCT
GTCTGGAGGAGCGAAGCAAAACAAGGCCTTCCAGCCTCTCAAGCTCAAAG
ACACACCGCTGACGCTGTCTGGAGGAGCGAAGCAAAACAAGGCCTTCCAG
CCTCTCAAGCTCAAAGACACCATGACGGGCGCTTGGCATTCGGTGAGCGT
CTACCTCACTCTCGACGCACGGAGCAACTGCTGGCTCATCGAATCTTGCA
TTGTCAAGGGCGAATTGTGACATGACGGGCGCTTGGCATTCGGTGAGCGT
CTACCTCACTCTCGACGCACGGAGCAACTGCTGGCTCATCGAATCTTGCA
TTGTCAAGGGCGAATTGTGA
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