mRNA_C-linearis_contig8.15719.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 1167 bits (3019), Expect = 0.000e+0 Identity = 640/757 (84.54%), Postives = 677/757 (89.43%), Query Frame = 2
Query: 98 MRTVAMNLPLAVLMGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRARAV-QPR-AALAARNMRIMSAAVDTETDADTAGATSAVE-------IPVAVEDTISPALEDDEDVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGS----DLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEGXXXXXXXXXXXXXXXXXXXGMDSAAFGREDFADTAQGXXXXXXXADWQQFLNNYFDDKE 2329
MRTV +NLPLAV++GLAGSSTAFLQSVRPTNFVVPAHKYNAAVSR RA QPR AA R MRIMSAAVD ET+ A A + +E + ISPA+EDD+D VSIALEDIVVG+EYEGV+NNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGD VRVRVLNVDGEARKLVLSMRQKPR++++EQG+V KYA+MLAEDPSQF+SAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHV+DVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGE R+APVAA KDVSHL+G+DP EFRKGTVSAVA+YGLFVNIEGVDGLLH+SKMS DRS+TSENIHS Y EGQEV+IRIMEVNTANNKMSLSMLP TEEADFGRYT++ EEWLEGTVVSIMNYGAFVRL+GDVDGMVHISQLDPHGERVDSVYN+VEIGQ VRVRILEADP +RKLRLTMREEGYEGATGG+ DRRG KK KSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQ+GQ+VQVRVIEVDVDNCRLGLSMREPRQ R G+RGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMA+GRVDSVEDVCE+GQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYG DEG XXXXX MDSAAFGREDFADT Q XXXXXXXADWQQFLNNYFDDKE
Sbjct: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVD-ETETTEAAAEATLEEXXXXXPVXXXXXXPISPAMEDDDDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPR---GARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYG-DEGFGAEGGRRGRGGGXXXXX--MDSAAFGREDFADTTQ-XXXXXXXADWQQFLNNYFDDKE 749
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 527 bits (1357), Expect = 6.810e-174 Identity = 331/753 (43.96%), Postives = 449/753 (59.63%), Query Frame = 2
Query: 98 MRTVAMNLPLAVLMGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRARAVQPRAALAARNMRIMSAAVDTETDADTAGATSAVEIPVAVEDTISPALEDDEDVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQ-GDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGE-RVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGY-EGATGGSDLGGGDR-RGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGN--IDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGG---GYGNDEGXXXXXXXXXXXXXXXXXXXGMDSAAFGREDFADTAQGXXXXXXXADWQQFLNNYFDDKE 2329
MR V++ L AVL+GL S AF + VV H+ N A+S R+ +S + T AD A ++A L D+VVG +YEGVV+NV++YGAFVDIG E NGLVHISQLAD FV+N + V EGD+V V+VL++D +KLVL+MR PRAA +Q D+S YAE+LA DP + + VE++V YGAF L +GCSGF+HISQ+ P E VS+VSDV+TVGQ V VR+R+VD+ L R+N+SLLP +A AA KDVS L+ AD A FR GTVSAV +YG FV ++GVDGLLHISK+ ++T + S GQEV +RI+ V+ A NK+SL+M+ E D + SPEEW+EG+VVS YGAFV L +DGMVHIS+L GE RVD+V + + +G AV+VR++E P ARK+RL+MRE G E A G+ GG R RG + K V + + EEW+ G+V S T FGAFVA+ DGLLH+S++A V +D L GQ+++VRVI+VD + R+GLS+R+ R+ + +D+SVL G D F+PG V S+V YG FV ++ I+GL+H+S+++ RV+ V DV G +VQVR+ +++ D VNLSM+P G+ DRS G G D + D+ D+A ADWQ++LN YF+ K+
Sbjct: 1 MRCVSVPLQTAVLLGLVSGSAAFAFAPN-AKVVVHQHRLNRAISNTRSR-------------LSVRMSTVAPADLADNSAAAS--------------------KTLLADLVVGQQYEGVVSNVLSYGAFVDIGAEANGLVHISQLADAFVSNPTEIVAEGDSVSVKVLSIDQAEKKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGATSA-----AATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARR--------APVSRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRSRNARRGTGEDGAADDASDPFGTGERRKSPRPRFN-------DYEDSA--LNVGGGEADWQKYLNQYFEKKD 694
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 446 bits (1148), Expect = 4.350e-142 Identity = 285/711 (40.08%), Postives = 403/711 (56.68%), Query Frame = 2
Query: 98 MRTVAMNLPLAVLMGLAGSSTAF--LQSVRPTNFVVPAHKYNAAVSRARAVQPRAALAARNMRIMSAAVDTETDADTAGATSAVEIPVAVEDTISPALEDDEDVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPR--AATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDG------------CSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQG--------GGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIE--GNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEG 2152
MR ++LP AVL+GL S F L S R + VPA +++AAVS +R + R A+ M I S T AV +PVA E P L D+ +G Y+G+VNNVV YG FVDIG VNGLVH SQL++ FV N + V +GD+V VRV+ +D +AR+L LSMR R A DV+ YA LA DP++FI V+ ++ GAF L G GF+H SQ+ P E V D D L+ GQ V VRIREVD +L RI++SLLP +G ++ +A +DVS + GADPAEFR GTV ++ EYG+FV ++GVDGLLH S++ R ++ + + ++ GQ+V +R+ V+TA N++SLSM+P D R+ ++ P+ W++G V + +GAFV + VDG+VHISQL + +V + V +G AVRVR++E DP R R + VK V +++ PE W+ G VA++ FGAFV +D DGL+H SQI ED L GQ V+VRV+ D + RL LSM +P + G R SGS +DVSVL G DPD F+ G V S++P+G FV ++ G + GL+H+SE++ GRV+ V +V G ++VR+ +++T ++LSM+ G+ DR+ G G+D G
Sbjct: 1 MRCPRVSLPSAVLLGLVLRSHGFVVLSSTRQ-HIHVPARQHSAAVSCSRCSRNRRAVL---MYISS--------------TEAVSLPVAEE---RPE--------KTKLSDLQLGVMYQGIVNNVVDYGVFVDIGASVNGLVHKSQLSNTFVTNPEKIVSQGDSVTVRVIGIDVDARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPERRXXXXXXXXXXXXXXXXXXXXXXXXXR--RGVKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGSDGG 678
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A2N1PT36_9BACT (Uncharacterized protein n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PT36_9BACT) HSP 1 Score: 216 bits (550), Expect = 1.750e-55 Identity = 151/462 (32.68%), Postives = 244/462 (52.81%), Query Frame = 2
Query: 431 VGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLA-DEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 1810
VG E EGVV N+V YGAFV+I + GLVH S ++ V N D VK G+ VRVRVL +D + +K+ L M+Q T + D K + + K+ N+VSYGAF LE G G VH+S MS T + V +++ G+ VDVRI E+D +I+ + + A A P + I D E G V+ + +G+FV +E G++GL+H+S +S + + N + G EV ++++++ + K+SL + + + T E GTV ++ N+GAFV L+ V+G+VHIS + E++D ++ +RV++LE + +K+ L +++ D + + K E + + G V IT FGAFV ++D +GL+HISQ+++ HV VED + +G ++V++IE+ D +L LS+R+
Sbjct: 339 VGTEVEGVVRNIVNYGAFVEIEPGLEGLVHHSDMSWTRRVNNPKDFVKSGEEVRVRVLEIDLDQKKISLGMKQ----LTPDPWDDIK----IRYKVDDVVKGKITNVVSYGAFVELEPGLEGLVHVSDMSWT-KRVKHPDEIVRAGEDVDVRILEIDVDKRKISFGI------KQATADPWSIIG-----KSYDIGEIYTGKVTNITNFGIFVELEEGIEGLVHVSDISWTQKIV--NPAGVCAIGDEVKVKVLDIKPGDKKISLGIKQVSADPWSSVETEFKVGETYTGTVKNLTNFGAFVELKDGVEGLVHISDMS-WTEKIDHPSQILKSSDKIRVKVLEINTSDKKISLGLKQLVL------------DPWAVFEEKYHEGMI-------VDGEVLRITSFGAFVRIEDGIEGLVHISQLSDKHVEKVEDVVAIGDRIRVKIIEIKDDERKLRLSLRD 758
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A1V5US35_9BACT (30S ribosomal protein S1 n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5US35_9BACT) HSP 1 Score: 199 bits (506), Expect = 4.420e-50 Identity = 141/546 (25.82%), Postives = 271/546 (49.63%), Query Frame = 2
Query: 434 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKE-GDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDI 2062
G G V + YGAF+DIG ++GL+HI+ ++ V+N D V G + +VL +D + +K+ L ++Q + E GD K E+ V+NI YG F LE G G +H+S +S +G + +D + GQ + ++ +V+ ++ +I + + + + +++ G + ++ YG+FV +E G++G +HIS +S + + + G +++++++++ K++L + + + E+ +EG V ++ +GAFV LE ++G++HIS L +R++ ++ G V+V+I+E +P +K+ L+ Y+ T +E + + G++ FGAFV V++ +GLLH S +A S+ + L+ G+ ++V V+ +D DN ++ L +++ Q ++ D E + G+V SI YGAF+ + I+GL+HIS++A RVD VE+V + GQ+V+V++ ++
Sbjct: 213 GSTVAGTVKSFTEYGAFIDIGG-IDGLLHITDMSYGHVSNPADVVSSIGSQITCKVLKLDRKTKKISLGLKQLSKNPWEEVGDKYKVGEIY--------ECTVKNIADYGVFATLEPGVDGLIHVSDLSWSGR--TRPNDFKS-GQKIKAKVIDVNLEIKKIKLGIKQVTKDPWEKVTETYPENTITN-----------GKIKSILNYGVFVELEDGIEGFIHISNISWTKKINHPS--ELLKVGDSIEVKVLKLDLETKKINLGIKQTHVDPWTMVESKFKVEQIVEGKVTNVKKFGAFVELEEGIEGLIHISDLS-WTKRLNHANEMLKTGDPVKVKIIEINPAEKKIALS-----YKHLT------------KDPWSDIETRFPIGAT--VEGKITHFASFGAFVEVEEGVEGLLHTSDLAWNKKYSDPSEVLKEGETIKVLVLNIDKDNRKMSLGVKQLAQ-----------DPLIAYKEKMDSGEMLDGKVKSIQEYGAFIEFDDGIEGLIHISQLADERVDKVENVVKAGQQVKVKVIEV 702
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A2V9LYV5_9BACT (30S ribosomal protein S1 (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LYV5_9BACT) HSP 1 Score: 195 bits (495), Expect = 6.440e-49 Identity = 152/566 (26.86%), Postives = 273/566 (48.23%), Query Frame = 2
Query: 434 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDP----------SQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSM 2095
G EGVV N+ YGAF+D+G V+GL+HI+ ++ V + + GD ++V+V+ + E ++ L +Q L+EDP + + KV ++ YGAF LE G G +HIS+M+ + V S +++V ++VDV I ++D + RI++ L + P ++ S P G V V ++G+FV +E G+DGL+HI+ MS R + + G ++ +++++ N + ++SL +E+ ++G VVS+ +YGAFV LE ++G++HIS++ +RV V + + V V IL+ D AR++ L +++ + ++S +P I+G+V ++T FG FV V++ DGL+H+S ++ V + + + G +VQ ++ +D N +L L +++ + + + + G VV I +GAFV + I+GL H+SE+ VD + GQEV+++I +N + LS+
Sbjct: 166 GKVMEGVVKNITDYGAFIDLGG-VDGLLHITDMSWGRVNHPSELFNVGDKIKVKVIKFNREDGRVSLGYKQ------------------LSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEMT-WNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGL------KQTEPNPWDVME-----SRYTPGTVITGKVRNVTDFGVFVEVEDGIDGLVHITDMSWGRVNHPSELFNV---GDKIKVKVIKFNREDGRVSLGYKQLSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEMT-WNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGLKQT--------------EPNPWDVMES-----RYTPGTVITGKVRNVTDFGVFVEVEEGIDGLVHVSDMSWTKRVKHPSELFKKGDEVQAVILSIDAANQKLSLGIKQLEP-----------DRWEDWFSRHNVGDVVRGNVVRITNFGAFVELADGIEGLCHVSELDEKHVDKPAEFLAAGQEVEMKIIKLNLQEKKIGLSL 666
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A847LEK2_9BACT (Cytidylate kinase n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847LEK2_9BACT) HSP 1 Score: 192 bits (489), Expect = 2.110e-47 Identity = 137/466 (29.40%), Postives = 244/466 (52.36%), Query Frame = 2
Query: 434 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSL---LPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNI-EGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMR---EEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 1810
GD +GVV+ +V YGAF+D+G V GL+H + L+ +AN + V+ G + ++L +D E K+ L ++QK G V + E+ ++ KV+N++ +GAF LE+G G VHIS +S +V D++ G+V+ V ++E+D+ RI++S LP+ + + KG V+ + ++G FV I EG++GLLHIS M + + +GQEV+++I+ +++ N ++SL + T + + L G V ++++YGAFV+LE ++G++HIS+ + D +++G V V + E D +K+ L++R ++ ++G +RR V SV+Q G++ S+ + GA V + ++ G +HISQIA+ V + + ++ G V V+V+E+D N +L LS++E
Sbjct: 447 GDTIKGVVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVIANPREVVQPGQEIEAKILKIDNEKGKIALGLKQKKEDPW---GTVDQRYEV-----NRKYQGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPQDIVKSGEVITVLVKEIDKTKKRISLSYKDTLPHPWDNIEHKYKIG--------------DLVKGKVNNLTDFGAFVEISEGIEGLLHISDMDWVKKINHPK--EVLEKGQEVEVKILNIDSHNRRLSLGLKQTTSDPWGDLEKMFKIGDVLTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-EVLKVGDQVTVAVYELDKHKQKIGLSLRRVSDDPWKGI---------ERR--FPVNSVQQ-----------GKIVSVENSGAEVELAENVRGFIHISQIAQVRVQHPSEAVKEGDVVNVKVLELDRKNRKLKLSIKE 864
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A367ZTI6_9BACT (Cytidylate kinase n=1 Tax=Candidatus Ozemobacter sibiricus TaxID=2268124 RepID=A0A367ZTI6_9BACT) HSP 1 Score: 190 bits (482), Expect = 1.640e-46 Identity = 136/466 (29.18%), Postives = 244/466 (52.36%), Query Frame = 2
Query: 434 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQK---PRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNI-EGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKK---VKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 1810
GD +GVV+ +V YGAFVD+G V GL+H + L+ + N + V+ G + ++L +D E K+ L ++QK P ++ +V + + KV+N++ +GAF LE+G G VHIS +S +V SD++ G + V ++E+D+ RI++S + + P I+ + + KG V+ + ++G FV I EG++GLLHIS M + V +GQEV+++I+ +++ N ++SL + T + + + G V ++++YGAFV+LE ++G++HIS+ + D + +++G V V I E D +K+ L++R G + +G++K V S++Q G+V I + GA V + ++ G +H+SQIA++ V + + ++ G V V+V+E+D N +L LS++E
Sbjct: 446 GDLIKGVVSRLVEYGAFVDLGDGVEGLIHRNDLSWSVITNPREVVQPGQEIEAKILKIDHEKGKISLGLKQKKEDPWVTVDQRYEVGRKYQ-----------GKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPSDIVKSGDTITVLVKEIDKAKKRISLSY------KETQPHPWENIEQRFKVG-----DLVKGRVNNLTDFGAFVEIAEGIEGLLHISDMDWVKKVNHPK--EILEKGQEVEVKILNIDSHNRRLSLGLKQTTNDPWTDLDKLFKVGDIVTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-DVLKVGDQVTVAIYELDKYKQKIGLSLRRVGED-----------PWKGIEKRFPVNSLQQ-----------GKVIHIENSGAEVELAENVRGFIHVSQIAQERVQHPSEAVKEGDIVTVKVLEIDRKNRKLKLSIKE 863
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A847HL75_9BACT (S1 RNA-binding domain-containing protein n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847HL75_9BACT) HSP 1 Score: 184 bits (466), Expect = 3.860e-46 Identity = 131/467 (28.05%), Postives = 237/467 (50.75%), Query Frame = 2
Query: 431 VGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQK---PRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMS---LLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 1810
V D +G V+ +V YGAFVD+G V GL+H + L+ ++N + V+ G+TV R+L +D E K+ L ++QK P + V K +V+N++ +GAF LE+G G VHIS +S ++ S+V+ G +D+ ++E+D++ RI++S +LP+ E + + G V+ + ++G F+ I+ G++GLLH+S M + + +GQEV ++I+ +++AN+++SL + T + + + + G V +I+NYGAFV+LE ++G++H+S+ E V++ A+++G V V + E D +K+ L++R R + VE+ + G++ ++ G V V + G +HISQ+A V+ + ++ G V +V+E+D N RL LS++E
Sbjct: 84 VDDMIKGTVSRIVEYGAFVDLGDGVEGLIHRNDLSWSVISNPREVVQPGETVEARILKMDVEKGKISLGLKQKKDNPWETVDGRYQVGKK-----------YHGRVKNLMDFGAFVELEEGIEGLVHISDLS-WARNIKHPSEVVASGAEIDIVVKEIDKEKKRISLSYKEVLPHPWDEVTSKYKIGDVVT--------------GKVNNMTDFGAFIEIQQGIEGLLHVSDMDWVKKINHPK--EVLEKGQEVKVKILNIDSANHRLSLGLKQTTTDPWETVENTYKVGDQVTGVVKNIVNYGAFVQLESGLEGLLHVSEFSWQNE-VENPAEALKVGDQVTVMVYEIDRNKQKIGLSLR-----------------RLQDDPWRDVER--KFGKDSVHQGKITNLLENGVEVEVTEGITGFVHISQLAAQRVNTPSEVVKAGDVVTYKVLELDRKNRRLKLSIKE 502
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A1V6A8G2_9BACT (Cytidylate kinase n=1 Tax=bacterium ADurb.Bin157 TaxID=1866935 RepID=A0A1V6A8G2_9BACT) HSP 1 Score: 188 bits (477), Expect = 6.920e-46 Identity = 137/464 (29.53%), Postives = 235/464 (50.65%), Query Frame = 2
Query: 431 VGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMS---LLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNI-EGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 1810
V D +G V+ +V YGAF+D+G V GL+H + L+ ++N + V+ GD V ++L +D E K+ L ++QK K Q KV+N++ +GAF LE+G G VHIS +S ++ + V+ G +DV ++E+D++ RI++S +LP+ + A + I G V+ + ++G F+ I EGV+GLLHIS M + V +GQEV ++I+ ++ AN+++SL + T + E + G V +I++YGAFV+L ++G++H+S+L + V++ A+++G V V + E D +K+ L++R D D + S+ Q G ++++ GA + V D G +H+SQ+A V+N + ++VG V +V+E+D N RL LS+RE
Sbjct: 440 VDDVIKGTVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVISNPREVVQPGDEVEAKILKMDAEKGKISLGLKQKKENPWETVDTRYKVG--------QKYHGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNIDHPNQVVNTGDEIDVIVKEIDKEKKRISLSYKEVLPHPWEQVASQYTIGDIVT--------------GKVNNMTDFGAFIGIAEGVEGLLHISDMDWVKKVNHPK--EILEKGQEVSVKILNIDVANHRLSLGLKQTTVDPWERIEYEYKIGEQVTGVVKNIVSYGAFVQLANGIEGLLHVSELSWQND-VENPEQALKVGDQVTVIVYEIDKNKQKIGLSLRRL--------QDDPWKDVESRFRRDSIHQ-----------GTISNLLDNGAEIEVADGVIGFVHVSQLAAQRVNNPSEIVKVGDTVTYKVLELDRKNRRLKLSIRE 858 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15719.1 >prot_C-linearis_contig8.15719.1 ID=prot_C-linearis_contig8.15719.1|Name=mRNA_C-linearis_contig8.15719.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=745bp MRTVAMNLPLAVLMGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRARAVQback to top mRNA from alignment at C-linearis_contig8:2881053..2889796- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15719.1 ID=mRNA_C-linearis_contig8.15719.1|Name=mRNA_C-linearis_contig8.15719.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8744bp|location=Sequence derived from alignment at C-linearis_contig8:2881053..2889796- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:2881053..2889796- >mRNA_C-linearis_contig8.15719.1 ID=mRNA_C-linearis_contig8.15719.1|Name=mRNA_C-linearis_contig8.15719.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4470bp|location=Sequence derived from alignment at C-linearis_contig8:2881053..2889796- (Chordaria linearis ClinC8C monoicous)back to top |