mRNA_C-linearis_contig8.15619.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15619.1
Unique NamemRNA_C-linearis_contig8.15619.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: A0A6H5KEX7_9PHAE (Ribosomal_S13_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX7_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.270e-89
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH+ GKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRL+RYYRTNRKLAANWKYES+SASALVA
Sbjct:   38 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 188
[Close]
BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: A0A6H5KYF2_9PHAE (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF2_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 2.120e-85
Identity = 144/160 (90.00%), Postives = 150/160 (93.75%), Query Frame = 1 
Query:  874 LHCIRVVK*MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            LH   V K MGRMH+ GKGISKSSLPY+R  P WLK+SAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQV AITG+KILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRL+RYYRTNRKLAANWKY+SASASALVA
Sbjct:   13 LHAHYVFK-MGRMHSGGKGISKSSLPYRRRVPLWLKVSAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 171
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BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: D7FP13_ECTSI (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP13_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.900e-82
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1 
Query:  916 TAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            + GKGISKSSLPY+RS PSWLK+SAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQV AITG+KILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRL+RYYRTNRKLAANWKY+SASASALVA
Sbjct:   24 SGGKGISKSSLPYRRSAPSWLKVSAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 169
[Close]
BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: A0A7S2V1V2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1V2_9STRA)

HSP 1 Score: 258 bits (660), Expect = 3.490e-80
Identity = 128/151 (84.77%), Postives = 145/151 (96.03%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH+ GKG++ S+LPYKR+PPSWLKISA++V +HVCKLAKKGL+PSQIGVILRDSNGIAQVR++TGSK+LR+LK NGLA EIPEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRL+RYYRTNRKLA NWKYES++ASALVA
Sbjct:    1 MGRMHSRGKGMASSALPYKRTPPSWLKISAKDVEDHVCKLAKKGLSPSQIGVILRDSNGIAQVRSVTGSKVLRLLKKNGLAPEIPEDLYMLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTNRKLAPNWKYESSTASALVA 151
[Close]
BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: A0A6V1RUJ0_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUJ0_HETAK)

HSP 1 Score: 253 bits (647), Expect = 2.990e-78
Identity = 126/151 (83.44%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMHT+GKG+SKSS PYKRSPPSWLKI+A++V  H+CKLAKKGLTPSQIGV+LRDSNGIAQV+++TGSKILR+LK NGLA EIPEDLYMLIKKAV VRKHLERNR+D D+KFRLILIESRIHRL+RYYR NRKLA+NWKYES +ASALVA
Sbjct:    1 MGRMHTSGKGMSKSSRPYKRSPPSWLKITARDVETHICKLAKKGLTPSQIGVMLRDSNGIAQVKSVTGSKILRILKKNGLAPEIPEDLYMLIKKAVQVRKHLERNRKDHDAKFRLILIESRIHRLARYYRLNRKLASNWKYESDTASALVA 151
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BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: H3G9F0_PHYRM (Ribosomal_S13_N domain-containing protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G9F0_PHYRM)

HSP 1 Score: 249 bits (636), Expect = 1.290e-76
Identity = 121/151 (80.13%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH+ GKG+SKS+ PYKRSPPSWLK+++++V +H+CK AKKGLTPSQIGVILRDS+GIAQV+++TGSK+LR+LK NGLA E+PEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRL+RYYR NRKL+ NWKYESA+AS LVA
Sbjct:    1 MGRMHSHGKGMSKSARPYKRSPPSWLKVTSEDVEDHICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRLLKKNGLAPELPEDLYMLIKKAVAVRKHLERNRQDKDSKFRLILIESRIHRLARYYRKNRKLSPNWKYESATASTLVA 151
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BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: A0A6U5KTU7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KTU7_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.980e-75
Identity = 120/151 (79.47%), Postives = 138/151 (91.39%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH  GKGISKS+LPYKRSPPSWLKI++ +V EH+CKLAKKGLTPSQIGV+LRD +GIAQVR++TGSKI+R+LK  GLA EIPEDLYMLIKKAV+VRKHLE+NR+DKDSKFRLILIESRIHRL+RYYRT RKL  NW+Y SA+AS +VA
Sbjct:    1 MGRMHAPGKGISKSALPYKRSPPSWLKITSSDVEEHICKLAKKGLTPSQIGVVLRDQHGIAQVRSVTGSKIVRILKVQGLAPEIPEDLYMLIKKAVSVRKHLEKNRKDKDSKFRLILIESRIHRLARYYRTTRKLPPNWRYASATASTMVA 151
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BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: B7FNY4_PHATC (Predicted protein n=3 Tax=Naviculales TaxID=38748 RepID=B7FNY4_PHATC)

HSP 1 Score: 244 bits (622), Expect = 1.540e-74
Identity = 119/151 (78.81%), Postives = 138/151 (91.39%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH  GKGIS+ +LP+KR+PPSWLK+S+ +V + VCKLAKKGLTPSQIGVILRDSNGIAQV+ +TG K++R+LKANGLA EIPEDLYMLIKKAV VRKHLERNR+DKDSKFRLILIESRIHRL+RYYRT RKL +NWKYESA+AS +V+
Sbjct:    1 MGRMHAPGKGISRRALPFKRTPPSWLKVSSADVEDQVCKLAKKGLTPSQIGVILRDSNGIAQVKFVTGQKVVRILKANGLAPEIPEDLYMLIKKAVQVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTTRKLPSNWKYESATASTIVS 151
[Close]
BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: K0TMJ2_THAOC (Ribosomal_S13_N domain-containing protein n=14 Tax=Bacillariophyta TaxID=2836 RepID=K0TMJ2_THAOC)

HSP 1 Score: 242 bits (617), Expect = 8.470e-74
Identity = 122/151 (80.79%), Postives = 133/151 (88.08%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH  GKGISKS+ PYKR+PP W K SA +V EHVCKLAKKGLTPSQIGVILRDS+GI QV  +TG KI+R+LKA GLA EIPEDLYMLIKKAV VRKHLERNR+DKDSKFRLILIESRIHRL+RYYRT RKL ANWKYESA+AS +VA
Sbjct:    1 MGRMHAPGKGISKSARPYKRTPPGWCKQSAADVEEHVCKLAKKGLTPSQIGVILRDSHGIPQVHTVTGQKIVRILKAKGLAPEIPEDLYMLIKKAVQVRKHLERNRQDKDSKFRLILIESRIHRLARYYRTTRKLPANWKYESATASTMVA 151
[Close]
BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Match: A0A7S0SUB1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUB1_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.190e-73
Identity = 123/151 (81.46%), Postives = 138/151 (91.39%), Query Frame = 1 
Query:  901 MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALVA 1353
            MGRMH+ GKGISKSSLPYKRSPPSWLKISA +V + V KLAKKGLTPSQIGVILRD +G+AQV+++TG+K +R+LK  GLA  IPEDLYMLIKKAVAVRKHLERN++DKDSKFRLILIESRIHRL+RYYRT RKL ANWKYESA+ASALVA
Sbjct:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAAQVEDLVIKLAKKGLTPSQIGVILRDQHGVAQVKSVTGNKTVRILKKAGLAPTIPEDLYMLIKKAVAVRKHLERNKKDKDSKFRLILIESRIHRLARYYRTARKLEANWKYESATASALVA 151
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEX7_9PHAE1.270e-8997.35Ribosomal_S13_N domain-containing protein n=2 Tax=... [more]
A0A6H5KYF2_9PHAE2.120e-8590.00Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
D7FP13_ECTSI1.900e-8293.84Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
A0A7S2V1V2_9STRA3.490e-8084.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1RUJ0_HETAK2.990e-7883.44Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
H3G9F0_PHYRM1.290e-7680.13Ribosomal_S13_N domain-containing protein n=30 Tax... [more]
A0A6U5KTU7_9STRA1.980e-7579.47Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B7FNY4_PHATC1.540e-7478.81Predicted protein n=3 Tax=Naviculales TaxID=38748 ... [more]
K0TMJ2_THAOC8.470e-7480.79Ribosomal_S13_N domain-containing protein n=14 Tax... [more]
A0A7S0SUB1_9STRA1.190e-7381.46Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1938718..1941323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.8
Seed ortholog evalue1.2e-74
Seed eggNOG ortholog2880.D7FJH0
Preferred nameRPS13
KEGG koko:K02953
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033119,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042274,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070013,GO:0070181,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904,GO:1990932
EggNOG free text desc.small ribosomal subunit rRNA binding
EggNOG OGsCOG0184@1,KOG0400@2759
Ec32 ortholog descriptionRibosomal protein S15
Ec32 orthologEc-14_006330.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons3
Model size1825
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15619.1prot_C-linearis_contig8.15619.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 1939187..1940423 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930538.0819888-UTR-C-linearis_contig8:1938717..19391861622930538.0819888-UTR-C-linearis_contig8:1938717..1939186Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1938718..1939186 -
1690881121.0742478-UTR-C-linearis_contig8:1938717..19391861690881121.0742478-UTR-C-linearis_contig8:1938717..1939186Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1938718..1939186 -
1622930538.180103-UTR-C-linearis_contig8:1940423..19413231622930538.180103-UTR-C-linearis_contig8:1940423..1941323Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1940424..1941323 -
1690881121.1277497-UTR-C-linearis_contig8:1940423..19413231690881121.1277497-UTR-C-linearis_contig8:1940423..1941323Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1940424..1941323 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930538.1045868-CDS-C-linearis_contig8:1939186..19394071622930538.1045868-CDS-C-linearis_contig8:1939186..1939407Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1939187..1939407 -
1690881121.0891747-CDS-C-linearis_contig8:1939186..19394071690881121.0891747-CDS-C-linearis_contig8:1939186..1939407Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1939187..1939407 -
1622930538.1218402-CDS-C-linearis_contig8:1939634..19397221622930538.1218402-CDS-C-linearis_contig8:1939634..1939722Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1939635..1939722 -
1690881121.1065917-CDS-C-linearis_contig8:1939634..19397221690881121.1065917-CDS-C-linearis_contig8:1939634..1939722Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1939635..1939722 -
1622930538.1386-CDS-C-linearis_contig8:1940276..19404231622930538.1386-CDS-C-linearis_contig8:1940276..1940423Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1940277..1940423 -
1690881121.115538-CDS-C-linearis_contig8:1940276..19404231690881121.115538-CDS-C-linearis_contig8:1940276..1940423Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1940277..1940423 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15619.1

>prot_C-linearis_contig8.15619.1 ID=prot_C-linearis_contig8.15619.1|Name=mRNA_C-linearis_contig8.15619.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=152bp
MGRMHTAGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQI
GVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRK
HLERNRRDKDSKFRLILIESRIHRLSRYYRTNRKLAANWKYESASASALV
A*
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mRNA from alignment at C-linearis_contig8:1938718..1941323-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15619.1 ID=mRNA_C-linearis_contig8.15619.1|Name=mRNA_C-linearis_contig8.15619.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2606bp|location=Sequence derived from alignment at C-linearis_contig8:1938718..1941323- (Chordaria linearis ClinC8C monoicous)
GCTTCGCCTGATCCTTCGTGTTTCCCGACACACCTCCTCGTCAAGGTGGG
TACCGTGCGAAGCCCTAGGCCGCCATCCGCGGCAAAGGTGGCACGATGTG
TCGCCTCTCCAAGCTCTCTTTGCGTTTGGTTCGAAAACGTCCACCCTGTG
CATCTGCAGGATGGGTGGAGTTGAGAGAGCTACAGAGCAGCAGCGCGGAG
TGTCTGGCTCTCGTCTGTTTTGGCGGGGCAAGCACACCGTACCACTGTTG
ATTTTGTGGTGACGGGCCTGTGCCCTTGTGGGCGCGTAGTTCCCTCTGGA
GTTAAGGCAGTGTTAAAATTTGCTCCCGCTGCCAGTTTTTTTTTGCCGTC
AGGCGGTGTGAGCCACTATCTTCCCCGCGGCGAGAGGTTACATCTCGCCC
GGCGTGGATGAGTACTTTCCACTAGCAGCAATCGGCAAGATGCAGGGTGC
AGTAGCTTCGGCGAGGGCAGAAGACCTTGCAAGGTTTCCCATCCTCATGC
TGTAGTCTACGCAGAGGCGGCGTTGGAGGCTGCAGGGTAGCTAGGGGGGG
TGTTGTCTTGTGTTGCAAGACGGTGTGCCCTCCCCGCCCCCGTGTTTCCT
GCGCCAGCACAAGCGAGCGATCGGGAAAATGAAATGCAATGCCGCGCACA
GGGACCCGTCCGGTCTAGGCTGACGGGTGCCCTGGTTAACCCCCGCTGTT
GAAGTCCCCCCCCCTCTCTTTGCTTTCCGGTCGTCTCTTCCTCCTCATGT
CTCCGGTTGGTGGTGGTGGTCCATATTTCAAAACCCAACCGAATGGGGTG
TGGGGTGGGTGGTGGTGTCCGCGTTGGTCCCAATCGACGGCCTTTATCGG
CGGGGTTCATCGGGGGTATATTTTTGCACTGCATACGCGTTGTCAAGTAG
ATGGGTCGCATGCACACGGCCGGAAAGGGTATCTCCAAGTCGTCCCTCCC
CTACAAGAGGAGCCCGCCCTCGTGGCTCAAGATCTCCGCCCAGGAGGTGA
CCGAGCACGTGTGCAAGCTGGCCAAGAAGGGCCTCACGCCTTCGCAGGTG
AGCTCAACAGGGGGAGGGGGAGGAGGCGCAGCGCTTATGTTGCGCGGCCC
GCCCAATTCACCAAAGCGCGGCTTTTGTCCGGGACCAGCAGCTTTTGTCA
AAACGTGCGGCGGTGCCTGAGCTTTATTCATTCCACCCGGAGTAAACGTG
TAGACTAGCATCACAAATACCGAAGATGTTGTGTACTCTGCTGGACCCAG
AATTCACGGGGAGTAACCACAAAAAGATTTGCGGAGTAGGAGTGTAACCG
CAGTTGTAGCTGCACCTCTAGTGGGGTGCGTGTGTTGGCGCCTGGCCTAT
CTCACCAGGATGACGTGACGAAATGGTAGGTTACCATATACCAACCAGCT
TCTCTAGGATTTGTGCACGGCGAGTTGTGAAACAGGGCACGAAACATTTG
TTTCATCTCGCGGGGGTGGGGGTGTTTGTTGAAGTAAAGTTTGGAGGTGT
CGTTTGTCTTCCCTCCCCGACGGCGGCAGTGGTGTTTCTTCCCTTCTCTA
TGGTGACCGTACTACTGCTGTGATGTCCCTCCTCGTTGTTTGTTTGTGCA
GATCGGTGTGATCCTGCGTGACTCCAACGGCATCGCCCAGGTCCGCGCCA
TCACCGGCTCCAAGATCCTCCGCGTGCTCAAGGCCAACGGTAAGCAAAGA
TACGACAAGCCTTTGTTAATTAGCATGTCATGCGGGGCGACTACACCCAT
CGAAAGGCCACGGGAAAGCGCACGTTTCTGGTATACATGCGGCTGTCAAA
CGCACTGGCCTGACTTGTGACTCGAAGGCTTGGCAAACAACCGAGTATTG
ACACCTCATTCCCCCACCCCACCCCCGCTATCGCGTCCGCATCCGCATCG
CATCGCGTCTCACCAGGCCTCGCCGCCGAGATCCCCGAGGACCTTTACAT
GCTCATCAAGAAGGCTGTGGCCGTGCGCAAGCACCTGGAGCGCAACCGCC
GCGACAAGGACTCCAAGTTCCGCCTGATTCTGATCGAGTCTCGCATCCAC
CGCCTCTCCCGGTACTACCGCACCAACCGCAAGCTGGCCGCCAACTGGAA
GTACGAGTCCGCCTCGGCCTCCGCCCTGGTTGCCTAAGCCTAGTAGGCGT
GTGTCTTTGTACGGCAGGAGGGGTGTTGTCACGTAACGTCGTGGTGTCGA
TGCTTTTTATTGGTCGAGTTGAGTTGCACCGTTTCTTGCGGCACGCGACT
ACGCTAGGTTATTCCTTCCGGTATAAGGCGTTGTGACTTTGAGTCCAGTC
CCGCAAGCCGGGGTGGAAAGGCGAAGTAAATAAAAAGAAACGAAAATAAT
GTTGAGGGACCTGCAAAACAATCGAAACAGCACATCCTCGAGTGAGAGGG
GCGCCGGCGCCGTCGTTGCCACACGCGGTCGAGCAGCCGTAGTTTTTCGT
TCGCCTGGCACATTTCCCACCAAGACAAGACGGTCTTGTCCTGCTGTATT
TGGAGCAGAGAGGGAACTTTCCGATAGGAGTGCCACACGGGCGATAACTT
CATTCCTTATGCGATCGCGCCAAGGTTACGTCTACCGTCTCAAACACGAA
ACCTGC
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Coding sequence (CDS) from alignment at C-linearis_contig8:1938718..1941323-

>mRNA_C-linearis_contig8.15619.1 ID=mRNA_C-linearis_contig8.15619.1|Name=mRNA_C-linearis_contig8.15619.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at C-linearis_contig8:1938718..1941323- (Chordaria linearis ClinC8C monoicous)
ATGGGTCGCATGCACACGGCCGGAAAGGGTATCTCCAAGTCGTCCCTCCC
CTACAAGAGGAGCCCGCCCTCGTGGCTCAAGATCTCCGCCCAGGAGGTGA
CCGAGCACGTGTGCAAGCTGGCCAAGAAGGGCCTCACGCCTTCGCAGATG
GGTCGCATGCACACGGCCGGAAAGGGTATCTCCAAGTCGTCCCTCCCCTA
CAAGAGGAGCCCGCCCTCGTGGCTCAAGATCTCCGCCCAGGAGGTGACCG
AGCACGTGTGCAAGCTGGCCAAGAAGGGCCTCACGCCTTCGCAGATCGGT
GTGATCCTGCGTGACTCCAACGGCATCGCCCAGGTCCGCGCCATCACCGG
CTCCAAGATCCTCCGCGTGCTCAAGGCCAACGATCGGTGTGATCCTGCGT
GACTCCAACGGCATCGCCCAGGTCCGCGCCATCACCGGCTCCAAGATCCT
CCGCGTGCTCAAGGCCAACGGCCTCGCCGCCGAGATCCCCGAGGACCTTT
ACATGCTCATCAAGAAGGCTGTGGCCGTGCGCAAGCACCTGGAGCGCAAC
CGCCGCGACAAGGACTCCAAGTTCCGCCTGATTCTGATCGAGTCTCGCAT
CCACCGCCTCTCCCGGTACTACCGCACCAACCGCAAGCTGGCCGCCAACT
GGAAGTACGAGTCCGCCTCGGCCTCCGCCCTGGTTGCCTAAGCCTCGCCG
CCGAGATCCCCGAGGACCTTTACATGCTCATCAAGAAGGCTGTGGCCGTG
CGCAAGCACCTGGAGCGCAACCGCCGCGACAAGGACTCCAAGTTCCGCCT
GATTCTGATCGAGTCTCGCATCCACCGCCTCTCCCGGTACTACCGCACCA
ACCGCAAGCTGGCCGCCAACTGGAAGTACGAGTCCGCCTCGGCCTCCGCC
CTGGTTGCCTAA
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