mRNA_C-linearis_contig8.15590.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15590.1
Unique NamemRNA_C-linearis_contig8.15590.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: D7G098_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G098_ECTSI)

HSP 1 Score: 1150 bits (2974), Expect = 0.000e+0
Identity = 570/634 (89.91%), Postives = 583/634 (91.96%), Query Frame = 1
Query:    1 MNLVAGYGSSDGGDSSXXXXXXXXXXXXXXXXXXXXAARPKATFRAPRVNAAPNVLISGAMAQASDSLMSSPLGTLGLKSTSKSGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREKTDFEAGRMTAEQAKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            MNLVAGYGSSD  +SS                    AARPKATFRAPRVNAAPNVL+SGAMAQA+DSLMSSPLG LGLK +SK+GGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVD+RGDTVGNLSEHSKRQGDTVLSA+ G LRR KR       XXXXXXXX           DLGDSD DGVWAPE  REKTDFEAG MTAEQ KFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESK ARSTFHGKAQHDYQGRSWMAPPAGARSVE+EG+DVHKCFTPKKCIHRYTGHTKGVQAI+FFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRD+QFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDAR+GSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPL+PSWVATAGWDGVIKLWD
Sbjct:    1 MNLVAGYGSSDDANSSDGGGGSGPASK---------AARPKATFRAPRVNAAPNVLVSGAMAQATDSLMSSPLGRLGLKPSSKTGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDSRGDTVGNLSEHSKRQGDTVLSAEVGGLRRNKRKKQAGAGXXXXXXXXGEGKGEERGG-DLGDSDNDGVWAPEVPREKTDFEAGTMTAEQTKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKTARSTFHGKAQHDYQGRSWMAPPAGARSVEDEGEDVHKCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDIQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARNGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLEPSWVATAGWDGVIKLWD 624          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: A0A7S2Y0E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E0_9STRA)

HSP 1 Score: 619 bits (1595), Expect = 3.790e-208
Identity = 313/584 (53.60%), Postives = 392/584 (67.12%), Query Frame = 1
Query:  259 QIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLS-----------------EHSKRQG-------DTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAARE------------KTDFEAGRMTAEQAKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            Q ++ NPKA    AP  GPAHP+++++ +PA GR   TG V+E A +E+W+F +QYHTF  FGYA D +G  VGN S                 E +K+QG       D  +SA  G  ++ +R                          D GD + +G  A EA  E            +TDFE G +T EQ KFR+ WEA Q  KH+EY+M+EDHDRRDERKISHL+PPRH+R T +  + + FHG+ + DYQGRSW+ PP G ++    GD  HK F PK+CIHR+TGHTKGV  I FFPG+GHLLLS SMD  +KIWDV   R  +RTYQGHS  VRDV+F+ DG QF             TETGQ + TFTNRK+PYC +YYPVD N+FL G S N+VVQ+DAR+ +EIVQEYNHHLGPVNTVLF +DN+RFVSTSDDKK+LIWEYNIPVPIKYI+EP MHSMP TTLHP+G FF GQS++N+I  + ARD+F+ M+KK FKGHVNAGYA R++FSPNGK++  GD +GK ++WDWGS ++Y+K   H++ P     WHP++ SWVAT GWDGVIKLWD
Sbjct:   74 QKLVINPKAAAITAPTYGPAHPYKQEMALPAHGREMPTG-VLEPAGVEDWAFQQQYHTFANFGYAHDDQGKVVGNESGPWRVHSALQAAVKGKKEDTKKQGGGEEVLPDAQMSAFTGSDKQLRRQLKKRRKRERALQEIKKRAREAAE--DHGDGE-EGGGASEAKGEGKTIEEELYGGPQTDFEKGTITEEQLKFRQEWEAAQKLKHKEYDMDEDHDRRDERKISHLMPPRHDRHTTAPDSSTKFHGRQEVDYQGRSWVKPPRGHKA----GDGTHKAFPPKRCIHRWTGHTKGVNHIEFFPGHGHLLLSCSMDAKIKIWDVLEDRQVKRTYQGHSMGVRDVRFNADGSQFXXXXXXXXXXXXXTETGQVLGTFTNRKVPYCVRYYPVDENIFLVGSSCNKVVQWDARA-NEIVQEYNHHLGPVNTVLFAEDNRRFVSTSDDKKILIWEYNIPVPIKYISEPSMHSMPTTTLHPSGNFFAGQSMNNEIHVYAARDRFKFMRKKLFKGHVNAGYANRISFSPNGKYICCGDAEGKFFVWDWGSRRIYKKFLAHENNPVTSCDWHPVESSWVATCGWDGVIKLWD 648          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: A0A836CBI0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI0_9STRA)

HSP 1 Score: 605 bits (1559), Expect = 2.380e-203
Identity = 338/637 (53.06%), Postives = 410/637 (64.36%), Query Frame = 1
Query:    1 MNLVAGYGSSDGGDSSXXXXXXXXXXXXXXXXXXXXAARPKATFRAPRVNAAPNVLISGAMAQASDSLMSSPLGTLGLKSTSKSGGQIMIHNPKAEHFLAPVQGPAHPHRRD-LPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEA--AREKTDFEAGRMTAEQAKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            M+L+ GY S  G D S                      +P+   RA  V AAP V+ +   A++  + +S+  G +G   T+++ GQ+M++NPKA+  LAPV GPAHP R   + VP GG  TG G V+E+AS+E+WSF EQYHTF Q  Y +   GD VG++++        +    AG  +R   XXXXXXXXXXXXXX            D+GD  T G+WAP+    R   D EAG MT  QA FREA+ AE+AKK REYNMEEDHDRRDERK+ HLLPPRH+RDT +  A++TFHGK + DY+G+SW+ PP G R+    G   H+ F PKKCIHR+TGHTKGVQAI FFPG+GHL+LS SMDG  K+WDV G R  RRTY GHSAAVRDV+FSNDG++FLSAGYDRF+R WDTETGQC+ TFTNRKMPY   +YP                                                             EY IPVPIKYI+EP MHSMPA  LHP+G ++VGQSLDN+I+ W ARDKFRQ +KK FKGH NAGYACRM FSPNGK+LASGDG+G++++WDWGSTKVYRKL  H DGPCIDV WHP + SWVATAGWDG+IKLWD
Sbjct:    1 MDLLQGYASGSGADESGSEAQEEQPMVSVNL-------KPQLQTRA--VVAAPTVIRAPEHAKSVVNPLSAAAGPVGQLQTARAPGQMMMYNPKADLLLAPVLGPAHPFRASKMEVPVGGSHTGAG-VVERASIEDWSFQEQYHTFQQHKYTIGVSGDMVGDVAKG-------LAVEQAGPPQREXXXXXXXXXXXXXXXXTGIT--------DVGDEVTTGIWAPQEDETRVVPDAEAGTMTEAQAAFREAYLAEKAKKQREYNMEEDHDRRDERKMGHLLPPRHDRDTTAAEAKTTFHGKKEADYKGKSWVEPPGGHRA----GVGDHQAFPPKKCIHRWTGHTKGVQAIEFFPGFGHLILSGSMDGKCKVWDVLGDRQARRTYSGHSAAVRDVKFSNDGRRFLSAGYDRFVRLWDTETGQCVRTFTNRKMPYTVTFYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGIPVPIKYISEPHMHSMPAVALHPSGNYWVGQSLDNQILAWGARDKFRQNRKKIFKGHTNAGYACRMDFSPNGKYLASGDGEGRLFVWDWGSTKVYRKLAAHTDGPCIDVKWHPTEASWVATAGWDGIIKLWD 607          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: W7TQP6_9STRA (Pre-mrna-processing factor 17 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP6_9STRA)

HSP 1 Score: 577 bits (1488), Expect = 1.270e-192
Identity = 291/547 (53.20%), Postives = 368/547 (67.28%), Query Frame = 1
Query:  274 NPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVD-ARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREK---TDFEAGRMTAEQAKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            N KA   LAP+QGP HP RR++    GG    TGG  E A +E+W+FHEQ+HTFH  GYA D   G  +GN+  + +++G   L   AG                                 DLG+ + DG WAP  A+E+   T  EAG +T EQ + R      +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT +    + FHGK + DYQGRSW+ PP G R VE +    H C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DG+ K+W V   R  RRTY GH+AAVR + FS DG +FLS G+DRF+R WDTETGQCI+T TNRK+PY AK+YP ++N+F+   SDNR+  YD  SG E+VQEYNHHL  VNTV F D+N RF STSDDKK+L+WE++I VPIKYIAEP MHSMPA T  P G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+   K + HD+GPCI + WHP++ S VA+ GWDG+IKLW+
Sbjct:   78 NVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEG---LRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEE-DGPWAP--AKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETD----HACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSG-EMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: K8Z4U6_NANGC (Pre-mRNA-processing factor 17 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4U6_NANGC)

HSP 1 Score: 570 bits (1470), Expect = 2.060e-187
Identity = 290/550 (52.73%), Postives = 370/550 (67.27%), Query Frame = 1
Query:  274 NPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVD-ARGDTVGNLSEHSKRQ------GDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREK---TDFEAGRMTAEQAKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIK 1893
            N KA   LAP+QGP HP RR++    GG    TGG  E A +E+W+FHEQ+HTFH  GYA D   G  +GN+  + +++      G T ++A  G + +P                            DLG+ + DG WAP  A+E+   T  EAG +T EQ + R      +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT +    + FHGK + DYQGRSW+ PP G R VE +    H C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DG+ K+W V   R  RRTY GH+AAVR + FS DG +FLS G+DRF+R WDTETGQCI+T TNRK+PY AK+YP ++N+F+   SDNR+  YD  SG E+VQEYNHHL  VNTV F D+N RF STSDDKK+L+WE++I VPIKYIAEP MHSMPA T  P G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+   K + HD+GPCI + WHP++ S VA+ GWDG+IK
Sbjct:   78 NVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKECLRDPAGPTAINA--GRVTKPS-------GSTALEPVSRRKRKGVEEDEDLGEEE-DGPWAP--AKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETD----HACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSG-EMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIK 609          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: F0Y5V9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5V9_AURAN)

HSP 1 Score: 554 bits (1427), Expect = 2.390e-185
Identity = 279/512 (54.49%), Postives = 342/512 (66.80%), Query Frame = 1
Query:  373 GGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREKTDFEAGR-MTAEQAKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFT-NRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            GG +E+A++EEWSF EQYHTF  FGYA DA G          K  GD      A D  RP+                            LG  D  GVWAPE   E  D +A   + A +A+  EA  A+     R Y+  ED DRRDERKISHLLP RH+RDT +  A+  FHG A  DYQGRSW  P  G   +  + DD H CF PK+C+H++TGH KGVQ I   P YGHL+LSASMDGS KIWDV   R    TY GH+ AVRD  FS+DG  F + G+DRF R WDTETG  + T T NRKM YC  +YP D+ + L G SDNR+ Q+D R+  EIVQEYNHHL PVN++ F+DD++RFVST+DDKK+ IWE+NIPVP+KYI+EP M+++P   LHP+  F+ GQSLDN IVT+ ARDK +QM+KK FKGH+N+GY+C + FSPNGKF+ASGDG+GK++ WD+ +T+VYRKLQ HD GPCI  AWHPL+PSWV T GWDG+IKLWD
Sbjct:   11 GGSVERAAIEEWSFDEQYHTFQSFGYAQDAAGG--------QKLVGDGA----AADAPRPRAKRKRGGDAP------------------LGTEDEHGVWAPEP--EHIDEDAPEDLAARKAEIAEAV-AKPKSATRAYDQNEDFDRRDERKISHLLPARHDRDTTAIEAKHAFHGDAMRDYQGRSWTRPNLG--ELRPKVDDDHDCFIPKRCVHKFTGHGKGVQCIKLHPTYGHLMLSASMDGSAKIWDVYNDRRCLMTYAGHAEAVRDATFSHDGSTFATCGFDRFTRVWDTETGAALHTLTPNRKMCYCVDFYPRDDKILLAGASDNRIYQWDLRANEEIVQEYNHHLQPVNSITFIDDDRRFVSTADDKKIFIWEHNIPVPMKYISEPHMNAVPVVELHPSTNFWCGQSLDNTIVTYGARDKLKQMRKKTFKGHLNSGYSCGITFSPNGKFIASGDGEGKLFFWDFKTTRVYRKLQAHDSGPCIGCAWHPLEPSWVFTCGWDGLIKLWD 487          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: A0A7S2WI16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI16_9STRA)

HSP 1 Score: 555 bits (1431), Expect = 4.530e-184
Identity = 270/558 (48.39%), Postives = 361/558 (64.70%), Query Frame = 1
Query:  247 KSGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRP-KRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREKTDFEAGRMTAEQAKFREAWEAEQAKKHR---EYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGK--AQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            K   + + +N K E  +AP  GP HP R    +P  G A    G I   ++++W+F EQ+HT++ +GYA+D RG  VG+   +  +QGD+V +      +R  K+                           LG     G WA     E  D +A  +   +AK     E    KK +   E+++  D DRRDERK SHLLP RH+++T++   +S FHGK   + DYQGRSW+ PP G R +  EGD++H  F PKKCIHR+TGH KGVQAI +FP  GHLLLSAS DG+VKIWDV+  R  RRTY GHS  VRDV F+NDG+ F++A +DR++R WDTETGQC++TF NRK+PY  K++P++ + FL                   VQEYNHH+  VN+VL  DD +RFVST+DDKK+L+WE+ IPVP+KYI +P MH++P T LHP G  F  QS++N+I  + ARD+FR+M+KK F+GHVNAGYAC++ +SPNGK++ASGDG+G++++WDW STK  R+ + HDDGPCID  WHPL+PSWVAT GWDG IKLWD
Sbjct:   66 KKAAKGLRYNAKKEVLMAPSAGPKHPFRTQAFMPHLGAAAHANGYIAPTNVDQWAFEEQFHTYNSYGYAMDTRGQVVGDSGAYRDQQGDSVSTMKPAKRKRSGKKAEDPILKAARAEAAREFDLGSGGGSGGLGG----GPWA-----EHRDEDAELLEEIEAKNHARMEEAAEKKKKAEDEFDVNADLDRRDERKFSHLLPARHDKNTKAMEPKSVFHGKKGTEVDYQGRSWVEPPLGVRPLSSEGDEIHDSFVPKKCIHRFTGHKKGVQAIRWFPDTGHLLLSASYDGTVKIWDVHNSRSVRRTYTGHSEGVRDVNFTNDGRHFITASFDRYMRYWDTETGQCVSTFCNRKVPYQVKFHPIEQDQFLXXXXXXXXXXXXXXXXXX-VQEYNHHIQSVNSVLICDDGKRFVSTADDKKILVWEWGIPVPMKYITDPTMHAVPTTALHPWGQHFTAQSMENEIHVYGARDRFRRMRKKVFRGHVNAGYACQITYSPNGKYMASGDGEGRLFVWDWKSTKQIRRFRAHDDGPCIDAQWHPLEPSWVATCGWDGTIKLWD 613          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: K3WD12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD12_GLOUD)

HSP 1 Score: 546 bits (1407), Expect = 1.180e-180
Identity = 277/555 (49.91%), Postives = 372/555 (67.03%), Query Frame = 1
Query:  259 QIMIHNPKAEHFLAPVQGPAHPHRRDL---PVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREK-TDFEAGRMTAEQAKFREAWEA---EQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            Q+ ++ P  E  LAP  GPA+ + R+    P   G       G++E+ ++E+++F  QYHT++Q    +     +    S+ S    D ++S +  ++   +                           + GD   DG+WAP   +   TD EAG MTAEQ   R+A  A   ++A++  +++ E D DR  E+K++HLLP R     E+  A++ F    ++DYQGRSW+ PP G R   +EG D H+ F PK+C+H++TGHTKGVQAI  FP YGHLLLS SMD +V+IWDV   +  +R Y+GHS AVR + FSNDGKQFLS G+DRFI+ WDTETGQ I +FTNR++PYC K+YP DNN F+ G S+N +VQ+DARSG EIVQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVP+KYI+EP MHSMPA TLHP+G FF GQSL+N+I  +TARDKF+  +KK FKGH NAGYAC++ FSPNG+++ SGD +G++  WDW STK+Y+KL+ HD GPC+   WHP++PS V + GWDG+IK WD
Sbjct:   65 QLSVNLP-VESTLAPYVGPANAYARNAQLDPAYVGSGKEIVTGIVEKTNMEDFNFDAQYHTYNQSHTGMYLNKRSAPETSQTS----DAIVSHNEENVFTTRNVKKRKNHTVAKEKAAAE---------EFGDDSVDGIWAPYMEKSVVTDAEAGTMTAEQEAIRDAHIAAKKQKAERSTQFDEEMDFDRMIEKKMAHLLPARLKAGQEAMVAKTQFLDTQEYDYQGRSWIEPPRGLRP--DEGGD-HQVFLPKRCVHKWTGHTKGVQAIELFPSYGHLLLSGSMDHTVRIWDVYNEKKCKRVYEGHSGAVRGINFSNDGKQFLSCGFDRFIQLWDTETGQSIKSFTNRRVPYCVKFYPGDNNNFVIGDSNNMIVQFDARSG-EIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPVKYISEPSMHSMPAVTLHPSGAFFAGQSLNNQIDVYTARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYIMSGDAEGRLCFWDWKSTKMYKKLRAHDRGPCMGALWHPIEPSKVVSCGWDGLIKYWD 601          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: A0A5D6XJI7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI7_9STRA)

HSP 1 Score: 536 bits (1381), Expect = 7.480e-177
Identity = 300/599 (50.08%), Postives = 380/599 (63.44%), Query Frame = 1
Query:  139 PRVNAAPNVLISGAMAQASDSLMSSPLGTLGLKSTSKSGGQIMIHNPKAEHFLAPVQGPAHPHRR--DLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDARGDTVGNLSEHSKR----QGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREK-TDFEAGRMTAEQAKFREAW-EAEQAKKHREYNMEE--DHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQ-HDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            P VN+AP+V  + +      SL S+    L L +  K   Q+ ++ P A   LAPV GP     R  D      GR   TG V+E ASL++ SF  QYHT++Q           V      +      + D+V +A     RR                              LGD   DGVWAP A +   T  EAG MTAEQA  REA  EA++ K  R   ++E  D DR  E+K +HLLP R     E+ AA S F    Q +DYQGR+W+ PP G   ++ + D  H+ F PK+C+H++ GHTKGVQAI  FP +GHLLLS S+D +V+IWDV   R  +R Y+GHS AVR + FSNDG+QFLSAG+DRFI+ WDTETGQ I  FTNR++PYC K+ P DN+ F+ G S+N VVQ+DARSG E+VQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVPIKYI+EP MHSMPA TLHP+GGFF GQSL+N+I  + ARDKF+  +KK FKGH NAGYAC++ FSPNG+++ SGD  G++  WDW STK+Y+KL+ HD GPC+   WHPL+PS V + GWDG+IK WD
Sbjct:   29 PSVNSAPSVSFTAS------SLSSTSSAALALVAAGK---QLSVNLPVAA-TLAPVLGPHAGTGRSSDALTRGTGREIVTG-VVENASLDDLSFDAQYHTYNQRHGGARLNRRAVSGAEAPTDAIVALEADSVFTARNAKKRR-----------------NAALAREKAAAEQLGDESVDGVWAPFADKSVLTAAEAGTMTAEQAALREAHLEAKRQKAERASQVDEEMDFDRMIEKKTAHLLPARLKAGQEAMAATSAFLDAGQEYDYQGRAWVEPPRG---LKPDPDGEHQVFLPKRCVHKWAGHTKGVQAIELFPTFGHLLLSGSLDHTVRIWDVYNERKCKRVYEGHSGAVRAIHFSNDGRQFLSAGFDRFIQLWDTETGQSIKAFTNRRVPYCVKFSPADNSQFVIGDSNNMVVQFDARSG-EVVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYAARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYVMSGDADGRLVFWDWKSTKLYKKLRAHDRGPCMGAVWHPLEPSKVVSCGWDGLIKYWD 595          
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Match: A0A2D4CLB3_PYTIN (Putative pre-mRNA splicing factor n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CLB3_PYTIN)

HSP 1 Score: 536 bits (1380), Expect = 1.090e-176
Identity = 282/572 (49.30%), Postives = 374/572 (65.38%), Query Frame = 1
Query:  232 LKSTSKSGGQIMIHNPKAEHFLAPVQGPAHPHRR---DLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQ--FGYAVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRXXXXXXXXXXXXXXXXXXXXXXXXXXDLGDSDTDGVWAPEAAREK---TDFEAGRMTAEQAKFREAWEAEQAKKHR-------EYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKAQHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIAFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD 1902
            L + S S  Q +  N   +  LAP  GP + + R     P   G       GV+E+  ++ +SF  QYHT++Q   G +++    +    S  ++R   T+         +PK                           + G  DTDG+WAP   +EK   TD EAG ++ EQA+ R+  E  +AKK +       E++ + D DR  E+K +HLLP R     ++  AR+ F    ++DYQGR+W+ PP   R+++ + D  H  + PK+CIH++ GHTKGVQAI  FP YGHLLLS S+D +V+IWDV   R  +R Y+GHS AVR + FSNDG+QFL+ G+DRFI+ WDTETGQ I +FTNR++PYC +Y+P DN  F+ G S+N VVQ+D RSG EIVQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVPIKYI+EP MHSMPA TLHP+GGFF GQSL+N+I  +TARDKF+  +KK FKGH +AGYAC++ FSPNG++L SGDG+GK+  WDW STK+Y+KL+ HD GPC+ VAWHP++PS V T GWDG+IKLWD
Sbjct:   59 LAAASTSSSQQLTVNLPVDSTLAPHYGPENAYARASASNPALVGSGKEIVTGVVERTDMDGFSFDSQYHTYNQQHSGLSLNKAPMSTDGDSVFTQR---TIAKKSKRRPAQPKTFAE-----------------------EFGSHDTDGIWAP--YKEKGVLTDAEAGTLSEEQARIRQ--ERLEAKKRKAEERSNTEFDEDMDFDRMVEKKTAHLLPARLKPGQKAMEARTEFLDTQEYDYQGRAWVEPP---RTLKPDEDAEHAVYLPKRCIHKWAGHTKGVQAIELFPKYGHLLLSGSLDNTVRIWDVYNERKCKRLYEGHSGAVRGLNFSNDGRQFLTCGFDRFIQLWDTETGQAIKSFTNRRVPYCIRYHPEDNTNFVIGDSNNMVVQFDTRSG-EIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKLCRKKVFKGHSSAGYACQIGFSPNGQYLTSGDGEGKLCFWDWKSTKMYKKLRAHDRGPCMGVAWHPIEPSQVVTCGWDGLIKLWD 596          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G098_ECTSI0.000e+089.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y0E0_9STRA3.790e-20853.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CBI0_9STRA2.380e-20353.06WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
W7TQP6_9STRA1.270e-19253.20Pre-mrna-processing factor 17 n=2 Tax=Monodopsidac... [more]
K8Z4U6_NANGC2.060e-18752.73Pre-mRNA-processing factor 17 n=1 Tax=Nannochlorop... [more]
F0Y5V9_AURAN2.390e-18554.49Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2WI16_9STRA4.530e-18448.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3WD12_GLOUD1.180e-18049.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XJI7_9STRA7.480e-17750.08Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4CLB3_PYTIN1.090e-17649.30Putative pre-mRNA splicing factor n=2 Tax=Pythium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1622752..1626864 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1159.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G098
Preferred nameCDC40
KEGG koko:K12816
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000348,GO:0000350,GO:0000375,GO:0000377,GO:0000389,GO:0000393,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031123,GO:0031124,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045292,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071007,GO:0071013,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG0282@1,KOG0282@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_005040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons3
Model size2958
Cds size1905
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15590.1prot_C-linearis_contig8.15590.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 1622752..1625811 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930532.1451492-CDS-C-linearis_contig8:1622751..16242361622930532.1451492-CDS-C-linearis_contig8:1622751..1624236Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1622752..1624236 +
1690881117.776754-CDS-C-linearis_contig8:1622751..16242361690881117.776754-CDS-C-linearis_contig8:1622751..1624236Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1622752..1624236 +
1622930532.1577199-CDS-C-linearis_contig8:1624635..16249531622930532.1577199-CDS-C-linearis_contig8:1624635..1624953Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1624636..1624953 +
1690881117.7947862-CDS-C-linearis_contig8:1624635..16249531690881117.7947862-CDS-C-linearis_contig8:1624635..1624953Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1624636..1624953 +
1622930532.175118-CDS-C-linearis_contig8:1625709..16258111622930532.175118-CDS-C-linearis_contig8:1625709..1625811Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1625710..1625811 +
1690881117.8073256-CDS-C-linearis_contig8:1625709..16258111690881117.8073256-CDS-C-linearis_contig8:1625709..1625811Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1625710..1625811 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930532.1948736-UTR-C-linearis_contig8:1625811..16268641622930532.1948736-UTR-C-linearis_contig8:1625811..1626864Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1625812..1626864 +
1690881117.8181794-UTR-C-linearis_contig8:1625811..16268641690881117.8181794-UTR-C-linearis_contig8:1625811..1626864Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1625812..1626864 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15590.1

>prot_C-linearis_contig8.15590.1 ID=prot_C-linearis_contig8.15590.1|Name=mRNA_C-linearis_contig8.15590.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=635bp
MNLVAGYGSSDGGDSSDGGGGAGTGGGSGSKPAAAAAARPKATFRAPRVN
AAPNVLISGAMAQASDSLMSSPLGTLGLKSTSKSGGQIMIHNPKAEHFLA
PVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGY
AVDARGDTVGNLSEHSKRQGDTVLSADAGDLRRPKRKKKSGAAAAAAGAA
AAAANDGKEEEEDLGDSDTDGVWAPEAAREKTDFEAGRMTAEQAKFREAW
EAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKAARSTFHGKA
QHDYQGRSWMAPPAGARSVEEEGDDVHKCFTPKKCIHRYTGHTKGVQAIA
FFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDVQFSNDGK
QFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSD
NRVVQYDARSGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWE
YNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQ
MKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKL
QCHDDGPCIDVAWHPLQPSWVATAGWDGVIKLWD*
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mRNA from alignment at C-linearis_contig8:1622752..1626864+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15590.1 ID=mRNA_C-linearis_contig8.15590.1|Name=mRNA_C-linearis_contig8.15590.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4113bp|location=Sequence derived from alignment at C-linearis_contig8:1622752..1626864+ (Chordaria linearis ClinC8C monoicous)
ATGAACCTCGTTGCTGGGTACGGGAGCAGTGACGGCGGCGACTCCTCCGA CGGTGGCGGCGGGGCAGGCACAGGCGGTGGGTCGGGATCGAAACCAGCGG CTGCTGCTGCTGCAAGACCGAAGGCGACTTTCCGCGCACCGCGCGTCAAC GCCGCTCCCAATGTCCTCATCTCCGGGGCCATGGCCCAGGCGTCAGACTC CCTCATGTCCTCTCCGCTCGGGACGCTGGGGCTCAAATCCACCAGCAAGA GCGGGGGGCAGATCATGATCCACAACCCGAAGGCCGAGCACTTCCTCGCC CCGGTGCAGGGCCCGGCCCACCCCCACCGGAGGGATCTGCCCGTCCCCGC GGGGGGGCGAGCCACCGGCACGGGCGGCGTGATTGAGCAGGCCTCCCTGG AGGAGTGGTCCTTCCACGAACAGTATCACACCTTCCACCAGTTCGGCTAC GCGGTGGACGCCCGCGGGGACACCGTGGGCAACCTCTCCGAGCACTCCAA GCGGCAAGGGGACACCGTGCTGTCGGCGGACGCGGGAGACCTCCGACGCC CCAAGCGCAAGAAGAAGTCGGGGGCAGCAGCAGCAGCAGCAGGAGCAGCA GCAGCAGCAGCAAATGATGGAAAGGAGGAGGAGGAGGATCTGGGTGACTC GGACACGGACGGGGTCTGGGCGCCGGAGGCGGCCCGGGAAAAGACCGACT TCGAGGCCGGCAGGATGACGGCGGAGCAGGCCAAGTTCCGCGAGGCGTGG GAAGCGGAGCAGGCCAAGAAGCACCGCGAGTACAACATGGAAGAGGACCA CGACCGGAGGGATGAGCGGAAGATTTCGCACCTCCTCCCGCCGCGGCACA ACCGCGACACCGAGTCCAAGGCAGCGCGGTCCACCTTCCACGGCAAGGCC CAGCACGACTACCAGGGCCGCTCTTGGATGGCGCCGCCCGCGGGGGCGAG GAGCGTCGAGGAGGAGGGCGACGACGTCCACAAGTGCTTCACGCCCAAGA AGTGCATACACCGGTACACGGGGCACACCAAGGGGGTGCAGGCCATCGCC TTCTTCCCGGGCTACGGCCACCTCTTGCTGTCGGCGAGCATGGACGGGTC GGTGAAGATCTGGGACGTGAACGGGGGCCGGGGGCAGCGGCGGACGTACC AGGGGCACTCCGCCGCCGTCCGGGACGTGCAGTTCTCGAACGACGGGAAG CAGTTCCTGAGCGCGGGGTACGACCGCTTCATCCGGCAGTGGGACACCGA GACGGGGCAGTGCATCGCCACCTTCACCAACCGCAAGATGCCCTACTGCG CCAAGTACTACCCGGTGGACAACAACATGTTCCTCTGCGGGTGCTCGGAC AACCGGGTGGTGCAGTACGACGCGCGCTCGGGGTCAGAGATCGTGCAGGA GTACAACCACCACCTGGGCCCCGTGAACACGGTGCTGTTCGTGGACGACA ACCAGCGGTTCGTCAGCACCTCCGACGACAAGAAGGTGTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTATTGTTGTTGTTGATTTTTGGCGTGTTTGCGTGC CAGTCGATACAGCATTACAGCATTTAGGCATACAACAGCAGAAGCTTGTG GTTGCGATTGTTGCACAGCGTACTTTTCGTTCCTGAACAACACCGCTTGC ACTTTACGCACGTCGTTCCATTCACCTCTACCCACCAATTCTTGCGACAA TTGAGGTGGCCGTTCCAGCAAAATCTCGCCCACCGACCCACCCACCCACC CACCCGCACGATTACCCAAATAAAAAAATGCTTGAAAAAAATACTGACAA ACAAAACAAACAAAAAACATGAAACAAAAAACAGGTCTTGATCTGGGAGT ACAACATCCCGGTGCCCATCAAGTACATCGCGGAGCCGGACATGCACTCG ATGCCCGCCACGACGCTACACCCCACGGGGGGCTTCTTCGTGGGGCAGTC CCTCGACAACAAGATCGTGACCTGGACGGCCCGCGACAAGTTCCGGCAGA TGAAGAAGAAGGAGTTCAAGGGGCACGTGAACGCGGGGTACGCGTGCCGG ATGGCGTTCAGCCCGAATGGCAAGTTCCTTGCCTCGGGGGACGGGCAGGG GAAGATGTACATCTGGGACTGGGGGAGCACCAAGGTCTATCGCAAGCTGC AGGTGTGTGTGCGTGCGTGCGTCGTGCGTGCGTGCGTGCATGTGTGTGTG GCGTTTTGGCTTGCGCGTGGGGTGGGTGTTTTGTTTTTGTGCGCGGGAGC AGCTTTTCGTGGTGTCTTGCTTTGTACCGCGACTGCGACGAAGTATCGCG CACGCGATTGTGTTGGAACATCGTGGAAAAAGCTAGGTTGCCGAATCGTC GCTGTTTAATGTGAGATCCGTGTGAGGTGTTTTCGTTGCGGCCCAAAGGG GAGCGGGTCACTTTTTGTCCAGTCATGAGGGTGATCGCGATCTGGGCCGC TGTGTTGGGATGGATGAACACGACCACGCCGGCAAGCAAGATGCGTCGAC CGCATTGGATGAACCTCGTGTAGAGCACGGACTGTTTGTACGGGCTCCAC AGATCGGAGGTCGAAGTGAACGCAAGCAGTGCTCTTTACACGACGTGACC ACCTCAGTGTAATCGGGCGCTCGCTCACGTGCCCACGTTCTCCTCGCCGA TTGCGCCGGGGGCAGTCAGATGCACCAGATGAATAACGTGACACGCTACG TAGAGAGCTTACCTTGTCCCCTCCTTCTTCCCTGCCTCCCTTCCCCTTCT CGCTCCTCGCTCCTTCCCTAAATACCAAGTATCATACATATGTACACTCG TATCACTCACCCCTTTTTTTCGTCACCGTCGCGTACTGTTTGGTGTCCCG CCCTCGCCCTGTCTTGTCTTGCCTTGCCTTGTCTTGTGTCGTGTTTTCGT TTTCGAAGTGCCACGACGACGGCCCTTGCATCGACGTCGCATGGCACCCG CTACAGCCGAGCTGGGTGGCCACGGCCGGGTGGGACGGAGTCATCAAGCT TTGGGATTAGATATCATAGAGTTACTTCATGGACGCGCTGCTGCCTTGGC GAGCTGGAAATGGGCCGGGGCGGGGGGCGCGGCGGGGTGTAAGTGGAAGA CCGCTGCTGGTGCGTAGCTGGTGCCTGGCCCACTATGTACTTCTGTGCTT GCCCTGTCCAGGGTGGTACAATGAATGGCCATCGCTTTGTGAGCCGAGGG AGGGCGATTTGGTGCGATCCGACGGCGTAAGTGTAGTCGTTTTTTCCCCA ACGTGCCGAAAGATTGTCTCCTTGCTCTCAGACCAACTGCGTATGCCTTG CACCCCGGCTTTCGCCGCGGACGGCATTGGGAGTCAGTCGCGCATTTGTT TGGGGATGAAGGACGGGTGGGTTGGTCTCCCTGTCTCGGAAGAAAAAACG CAGGAGAGGGTTGAATGACGCGCATTCTTGCTGGTGTAGGAGGAGGTAAA CGTTCGCTGCGAAATCGACGCGAAAATTTGCACCGCTCTCTTGCTGGCTG TTGTTTCGAGATAACATATTTCTTGGGAGGCTCGCTTCCCTGGTTTTCGG AACACTTTTTGTTTTTGTGCTGCCCCGGCCGGAGATACACGGCAAGCGTG TGGCCATCGGCGTACTCGACCTTTAGTTGTTAGCTGCCCCCCCCCTTGGC TCGCTTGGGCGGACGTGTGTGTTACTGTACGTTTTTCGTTCCCTACCAAA GCAAGGCCAGAGAAGTGCGCTGAGTCAGCCTGGTGTGTGTGTTTGGCATG GAGTTTAAGCTACCCGTGAGGTTGCCTTGTGCTGCCTTCAGAATTCAAGA CGCTTAAGGCTTGGTTGAACATAAGAGACTCGGAAGTATTTGCGGCCCGG CCCGTTTTGTTGGGGTTCGCTTGTGTAGCGTTTCTTATCCCTGCGGAAAG CGGCAGTCGTCGTGCTTGCGTAGGCGACCAGACGGAGATTCGGGAGGTTC CGAAAGAGAAAGGAGAAAAGAGACAGAAAGAGCCCCAAGGAAACGACCCT CTGGCGCTTACAATATTCTACCCAGAGCTCTAGTCTAGTCTTGTGCTCTC CGGTGCACCTGGC
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Coding sequence (CDS) from alignment at C-linearis_contig8:1622752..1626864+

>mRNA_C-linearis_contig8.15590.1 ID=mRNA_C-linearis_contig8.15590.1|Name=mRNA_C-linearis_contig8.15590.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3810bp|location=Sequence derived from alignment at C-linearis_contig8:1622752..1626864+ (Chordaria linearis ClinC8C monoicous)
ATGAACCTCGTTGCTGGGTACGGGAGCAGTGACGGCGGCGACTCCTCCGA
CGGTGGCGGCGGGGCAGGCACAGGCGGTGGGTCGGGATCGAAACCAGCGG
CTGCTGCTGCTGCAAGACCGAAGGCGACTTTCCGCGCACCGCGCGTCAAC
GCCGCTCCCAATGTCCTCATCTCCGGGGCCATGGCCCAGGCGTCAGACTC
CCTCATGTCCTCTCCGCTCGGGACGCTGGGGCTCAAATCCACCAGCAAGA
GCGGGGGGCAGATCATGATCCACAACCCGAAGGCCGAGCACTTCCTCGCC
CCGGTGCAGGGCCCGGCCCACCCCCACCGGAGGGATCTGCCCGTCCCCGC
GGGGGGGCGAGCCACCGGCACGGGCGGCGTGATTGAGCAGGCCTCCCTGG
AGGAGTGGTCCTTCCACGAACAGTATCACACCTTCCACCAGTTCGGCTAC
GCGGTGGACGCCCGCGGGGACACCGTGGGCAACCTCTCCGAGCACTCCAA
GCGGCAAGGGGACACCGTGCTGTCGGCGGACGCGGGAGACCTCCGACGCC
CCAAGCGCAAGAAGAAGTCGGGGGCAGCAGCAGCAGCAGCAGGAGCAGCA
GCAGCAGCAGCAAATGATGGAAAGGAGGAGGAGGAGGATCTGGGTGACTC
GGACACGGACGGGGTCTGGGCGCCGGAGGCGGCCCGGGAAAAGACCGACT
TCGAGGCCGGCAGGATGACGGCGGAGCAGGCCAAGTTCCGCGAGGCGTGG
GAAGCGGAGCAGGCCAAGAAGCACCGCGAGTACAACATGGAAGAGGACCA
CGACCGGAGGGATGAGCGGAAGATTTCGCACCTCCTCCCGCCGCGGCACA
ACCGCGACACCGAGTCCAAGGCAGCGCGGTCCACCTTCCACGGCAAGGCC
CAGCACGACTACCAGGGCCGCTCTTGGATGGCGCCGCCCGCGGGGGCGAG
GAGCGTCGAGGAGGAGGGCGACGACGTCCACAAGTGCTTCACGCCCAAGA
AGTGCATACACCGGTACACGGGGCACACCAAGGGGGTGCAGGCCATCGCC
TTCTTCCCGGGCTACGGCCACCTCTTGCTGTCGGCGAGCATGGACGGGTC
GGTGAAGATCTGGGACGTGAACGGGGGCCGGGGGCAGCGGCGGACGTACC
AGGGGCACTCCGCCGCCGTCCGGGACGTGCAGTTCTCGAACGACGGGAAG
CAGTTCCTGAGCGCGGGGTACGACCGCTTCATCCGGCAGTGGGACACCGA
GACGGGGCAGTGCATCGCCACCTTCACCAACCGCAAGATGCCCTACTGCG
CCAAGTACTACCCGGTGGACAACAACATGTTCCTCTGCGGGTGCTCGGAC
AACCGGGTGGTGCAGTACGACGCGCGCTCGGGGTCAGAGATCGTGCAGGA
GTACAACCACCACCTGGGCCCCGTGAACACGGTGCTGTTCGTGGACGACA
ACCAGCGGTTCGTCAGCACCTCCGACGACAAGAAGATGAACCTCGTTGCT
GGGTACGGGAGCAGTGACGGCGGCGACTCCTCCGACGGTGGCGGCGGGGC
AGGCACAGGCGGTGGGTCGGGATCGAAACCAGCGGCTGCTGCTGCTGCAA
GACCGAAGGCGACTTTCCGCGCACCGCGCGTCAACGCCGCTCCCAATGTC
CTCATCTCCGGGGCCATGGCCCAGGCGTCAGACTCCCTCATGTCCTCTCC
GCTCGGGACGCTGGGGCTCAAATCCACCAGCAAGAGCGGGGGGCAGATCA
TGATCCACAACCCGAAGGCCGAGCACTTCCTCGCCCCGGTGCAGGGCCCG
GCCCACCCCCACCGGAGGGATCTGCCCGTCCCCGCGGGGGGGCGAGCCAC
CGGCACGGGCGGCGTGATTGAGCAGGCCTCCCTGGAGGAGTGGTCCTTCC
ACGAACAGTATCACACCTTCCACCAGTTCGGCTACGCGGTGGACGCCCGC
GGGGACACCGTGGGCAACCTCTCCGAGCACTCCAAGCGGCAAGGGGACAC
CGTGCTGTCGGCGGACGCGGGAGACCTCCGACGCCCCAAGCGCAAGAAGA
AGTCGGGGGCAGCAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAAAT
GATGGAAAGGAGGAGGAGGAGGATCTGGGTGACTCGGACACGGACGGGGT
CTGGGCGCCGGAGGCGGCCCGGGAAAAGACCGACTTCGAGGCCGGCAGGA
TGACGGCGGAGCAGGCCAAGTTCCGCGAGGCGTGGGAAGCGGAGCAGGCC
AAGAAGCACCGCGAGTACAACATGGAAGAGGACCACGACCGGAGGGATGA
GCGGAAGATTTCGCACCTCCTCCCGCCGCGGCACAACCGCGACACCGAGT
CCAAGGCAGCGCGGTCCACCTTCCACGGCAAGGCCCAGCACGACTACCAG
GGCCGCTCTTGGATGGCGCCGCCCGCGGGGGCGAGGAGCGTCGAGGAGGA
GGGCGACGACGTCCACAAGTGCTTCACGCCCAAGAAGTGCATACACCGGT
ACACGGGGCACACCAAGGGGGTGCAGGCCATCGCCTTCTTCCCGGGCTAC
GGCCACCTCTTGCTGTCGGCGAGCATGGACGGGTCGGTGAAGATCTGGGA
CGTGAACGGGGGCCGGGGGCAGCGGCGGACGTACCAGGGGCACTCCGCCG
CCGTCCGGGACGTGCAGTTCTCGAACGACGGGAAGCAGTTCCTGAGCGCG
GGGTACGACCGCTTCATCCGGCAGTGGGACACCGAGACGGGGCAGTGCAT
CGCCACCTTCACCAACCGCAAGATGCCCTACTGCGCCAAGTACTACCCGG
TGGACAACAACATGTTCCTCTGCGGGTGCTCGGACAACCGGGTGGTGCAG
TACGACGCGCGCTCGGGGTCAGAGATCGTGCAGGAGTACAACCACCACCT
GGGCCCCGTGAACACGGTGCTGTTCGTGGACGACAACCAGCGGTTCGTCA
GCACCTCCGACGACAAGAAGGTCTTGATCTGGGAGTACAACATCCCGGTG
CCCATCAAGTACATCGCGGAGCCGGACATGCACTCGATGCCCGCCACGAC
GCTACACCCCACGGGGGGCTTCTTCGTGGGGCAGTCCCTCGACAACAAGA
TCGTGACCTGGACGGCCCGCGACAAGTTCCGGCAGATGAAGAAGAAGGAG
TTCAAGGGGCACGTGAACGCGGGGTACGCGTGCCGGATGGCGTTCAGCCC
GAATGGCAAGTTCCTTGCCTCGGGGGACGGGCAGGGGAAGATGTACATCT
GGGACTGGGGGAGCACCAAGGTCTATCGCAAGCTGCAGGTCTTGATCTGG
GAGTACAACATCCCGGTGCCCATCAAGTACATCGCGGAGCCGGACATGCA
CTCGATGCCCGCCACGACGCTACACCCCACGGGGGGCTTCTTCGTGGGGC
AGTCCCTCGACAACAAGATCGTGACCTGGACGGCCCGCGACAAGTTCCGG
CAGATGAAGAAGAAGGAGTTCAAGGGGCACGTGAACGCGGGGTACGCGTG
CCGGATGGCGTTCAGCCCGAATGGCAAGTTCCTTGCCTCGGGGGACGGGC
AGGGGAAGATGTACATCTGGGACTGGGGGAGCACCAAGGTCTATCGCAAG
CTGCAGTGCCACGACGACGGCCCTTGCATCGACGTCGCATGGCACCCGCT
ACAGCCGAGCTGGGTGGCCACGGCCGGGTGGGACGGAGTCATCAAGCTTT
GGGATTAGTGCCACGACGACGGCCCTTGCATCGACGTCGCATGGCACCCG
CTACAGCCGAGCTGGGTGGCCACGGCCGGGTGGGACGGAGTCATCAAGCT
TTGGGATTAG
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