mRNA_C-linearis_contig8.15509.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig8.15509.1
Unique Name	mRNA_C-linearis_contig8.15509.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.010e-42
Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 1

Query:  613 AGFVSQQQTAGSHGGVASAVGGLCEHATIAFRHMALRLLKKTKVVGVGIESGNYAAVKEAVATARSGGHLGDDEHNDVMAMVEGAERRGVWPVVETESNQYVVLDTRTRTSEHDWACVKFNQ---GGGARRMTPGRSFMCRVSLQNDA 1047
            AGFVSQQ+T GSHGGVASAVGGLC+HA +A  HMA + +K+   V  G+ S +YAA KE V  A+ G HL  +E NDVM++VEGAER GVWPVVE E +QY+VLD R+RT+E DW  VKF+Q   G  +RRM+  R FMC+V L +DA
Sbjct:   96 AGFVSQQRTVGSHGGVASAVGGLCQHAALALEHMAAKTMKRATSVLGGVASTDYAAAKELVTAAKLGSHLTAEECNDVMSIVEGAERSGVWPVVEVERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMSSSRHFMCKVFLDSDA 243

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BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot
Match: D7FR12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR12_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 9.380e-42
Identity = 87/149 (58.39%), Postives = 106/149 (71.14%), Query Frame = 1

Query:  610 RAGFVSQQQTAGSHGGVASAVGGLCEHATIAFRHMALRLLKKTKVV-GVGIESGNYAAVKEAVATARSGGHLGDDEHNDVMAMVEGAERRGVWPVVETESNQYVVLDTRTRTSEHDWACVKFNQ---GGGARRMTPGRSFMCRVSLQND 1044
            RAG V+QQQTAGSHGGVASA+GGLC+HA  A  HM  + +K  + V G G +   + A KE VATA+S GHL   EH  +M MVE AE  GVWPV ETE N +VV D RTRTSEHD+ACVK++    G  +RR+TP ++FMCRVSL+ D
Sbjct:  110 RAGLVAQQQTAGSHGGVASAIGGLCKHAKAALEHMRKKTVKDAREVKGDGWD---WDAAKEHVATAKSDGHLSVVEHTVIMTMVERAEGSGVWPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCRVSLRID 255

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BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot
Match: D8LSV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV9_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.380e-39
Identity = 83/143 (58.04%), Postives = 101/143 (70.63%), Query Frame = 1

Query:  610 RAGFVSQQQTAGSHGGVASAVGGLCEHATIAFRHMALRLLKKTKVV-GVGIESGNYAAVKEAVATARSGGHLGDDEHNDVMAMVEGAERRGVWPVVETESNQYVVLDTRTRTSEHDWACVKFNQ---GGGARRMTPGRSFMCR 1026
            RAG V+QQQTAGSHGGVASA+GGLC+HA  A  HM  + +K  + V G G +   + A KE VATA+S GHL   EH  +M MVE AE  GVWPV ETE N +VV D RTRTSEHD+ACVK++    G  +RR+TP ++FMCR
Sbjct:  146 RAGLVAQQQTAGSHGGVASAIGGLCKHAKAALEHMRKKTVKDAREVKGDGWD---WDAAKEHVATAKSDGHLSVVEHTAIMTMVERAEGSGVWPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 285

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BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot
Match: D7G2H3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H3_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.760e-26
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 1

Query:  712 MALRLLKKTKVVGVGIESGNYAAVKEAVATARSGGHLGDDEHNDVMAMVEGAERRGVWPVVETESNQYVVLDTRTRTSEHDWACVKFNQ---GGGARRMTPGRSFMCR 1026
            MA   +K+   V  G+ S +YAA KE V  A+ G HL  +E NDVM++VEGAER GVWPVVETE +QY+VLD R+RT+E DW  VKF+Q   G  +RRMT  R FMC+
Sbjct:    1 MAANTMKRATSVLGGVSSRDYAAAKELVTAAKLGSHLTAEECNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMTSSRHFMCK 108

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BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot
Match: D7FR86_ECTSI (Autophagy protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR86_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 8.150e-17
Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 1

Query:  847 MAMVEGAERRGVWPVVETESNQYVVLDTRTRTSEHDWACVKFNQ---GGGARRMTPGRSFMCRVSLQNDA 1047
            M++VEGAER GVWPVVETE +QY+VLD R+RT+E DW  VKF+Q   G G+RRMT  R FMC+V L +DA
Sbjct:    1 MSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKFDQVSEGEGSRRMTSSRHFMCKVFLDSDA 70

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5KPP3_9PHAE	1.010e-42	59.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FR12_ECTSI	9.380e-42	58.39	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LSV9_ECTSI	3.380e-39	58.04	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D7G2H3_ECTSI	1.760e-26	55.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FR86_ECTSI	8.150e-17	64.29	Autophagy protein 5 n=1 Tax=Ectocarpus siliculosus...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:890030..892441 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	94.4
Seed ortholog evalue	5.4e-17
Seed eggNOG ortholog	2880.D7FR86
Preferred name	ATG5
KEGG rclass	RC00055,RC00523
KEGG ko	ko:K01880,ko:K08339
KEGG Reaction	R03654
KEGG Pathway	ko00970,ko04136,ko04137,ko04138,ko04140,ko04211,ko04213,ko04216,ko04621,ko04622,ko05131,map00970,map04136,map04137,map04138,map04140,map04211,map04213,map04216,map04621,map04622,map05131
KEGG Module	M00359,M00360
Hectar predicted targeting category	mitochondrion
GOs	GO:0000045,GO:0000272,GO:0000407,GO:0000422,GO:0000423,GO:0001101,GO:0001775,GO:0001817,GO:0001974,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002697,GO:0002700,GO:0002718,GO:0002739,GO:0002791,GO:0003008,GO:0003013,GO:0003015,GO:0003018,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006464,GO:0006497,GO:0006501,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006995,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007423,GO:0007507,GO:0007552,GO:0007568,GO:0008015,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009251,GO:0009267,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009653,GO:0009791,GO:0009886,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0010040,GO:0010150,GO:0010522,GO:0010605,GO:0010623,GO:0010639,GO:0010941,GO:0010959,GO:0012501,GO:0012506,GO:0014706,GO:0015980,GO:0016020,GO:0016032,GO:0016043,GO:0016052,GO:0016236,GO:0016237,GO:0018410,GO:0019058,GO:0019079,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019883,GO:0022411,GO:0022607,GO:0030097,GO:0030098,GO:0030100,GO:0030139,GO:0030154,GO:0030217,GO:0030234,GO:0030424,GO:0030435,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0031056,GO:0031057,GO:0031090,GO:0031288,GO:0031323,GO:0031324,GO:0031344,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032258,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033077,GO:0033365,GO:0033554,GO:0034045,GO:0034274,GO:0034613,GO:0034645,GO:0034727,GO:0034762,GO:0034765,GO:0035051,GO:0035065,GO:0035067,GO:0035069,GO:0035096,GO:0035150,GO:0035296,GO:0035973,GO:0036211,GO:0039689,GO:0039694,GO:0042110,GO:0042157,GO:0042158,GO:0042221,GO:0042311,GO:0042493,GO:0042592,GO:0042594,GO:0042692,GO:0042742,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043383,GO:0043412,GO:0043562,GO:0043583,GO:0043687,GO:0043934,GO:0044042,GO:0044085,GO:0044087,GO:0044093,GO:0044232,GO:0044233,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044804,GO:0044805,GO:0045058,GO:0045060,GO:0045061,GO:0045321,GO:0045335,GO:0045806,GO:0046649,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048646,GO:0048707,GO:0048731,GO:0048738,GO:0048771,GO:0048827,GO:0048839,GO:0048840,GO:0048856,GO:0048869,GO:0050707,GO:0050708,GO:0050764,GO:0050765,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050832,GO:0050878,GO:0050880,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051279,GO:0051282,GO:0051409,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051924,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055012,GO:0055013,GO:0055015,GO:0055114,GO:0060033,GO:0060047,GO:0060255,GO:0060341,GO:0060491,GO:0060537,GO:0060548,GO:0060627,GO:0061061,GO:0061709,GO:0061723,GO:0061726,GO:0061739,GO:0061912,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070255,GO:0070257,GO:0070727,GO:0070925,GO:0071496,GO:0071500,GO:0071704,GO:0071840,GO:0072359,GO:0072665,GO:0075044,GO:0075071,GO:0080090,GO:0090066,GO:0090087,GO:0090239,GO:0090241,GO:0090693,GO:0090702,GO:0097014,GO:0097458,GO:0097708,GO:0097746,GO:0097755,GO:0098542,GO:0098588,GO:0098772,GO:0098805,GO:0099120,GO:0099402,GO:0099568,GO:0120025,GO:0120032,GO:0120035,GO:0120038,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901983,GO:1901984,GO:1902017,GO:1902115,GO:1902275,GO:1902494,GO:1902617,GO:1903008,GO:1903169,GO:1903320,GO:1903321,GO:1903530,GO:1904062,GO:1905037,GO:1905268,GO:1990234,GO:2000377,GO:2000378,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2001251
EggNOG free text desc.	process utilizing autophagic mechanism
EggNOG OGs	KOG2976@1,KOG2976@2759
EC	6.1.1.14
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko04131
Exons	3
Model size	1365
Cds size	492
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15509.1	prot_C-linearis_contig8.15509.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig8 891638..892129 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930517.9141402-UTR-C-linearis_contig8:890029..890171	1622930517.9141402-UTR-C-linearis_contig8:890029..890171	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 890030..890171 +
1690881110.4777305-UTR-C-linearis_contig8:890029..890171	1690881110.4777305-UTR-C-linearis_contig8:890029..890171	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 890030..890171 +
1622930517.9309664-UTR-C-linearis_contig8:890733..891024	1622930517.9309664-UTR-C-linearis_contig8:890733..891024	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 890734..891024 +
1690881110.4943469-UTR-C-linearis_contig8:890733..891024	1690881110.4943469-UTR-C-linearis_contig8:890733..891024	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 890734..891024 +
1622930517.9465463-UTR-C-linearis_contig8:891509..891637	1622930517.9465463-UTR-C-linearis_contig8:891509..891637	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 891510..891637 +
1690881110.503142-UTR-C-linearis_contig8:891509..891637	1690881110.503142-UTR-C-linearis_contig8:891509..891637	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 891510..891637 +
1622930517.981601-UTR-C-linearis_contig8:892129..892441	1622930517.981601-UTR-C-linearis_contig8:892129..892441	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 892130..892441 +
1690881110.5257702-UTR-C-linearis_contig8:892129..892441	1690881110.5257702-UTR-C-linearis_contig8:892129..892441	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig8 892130..892441 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930517.9633372-CDS-C-linearis_contig8:891637..892129	1622930517.9633372-CDS-C-linearis_contig8:891637..892129	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig8 891638..892129 +
1690881110.5153213-CDS-C-linearis_contig8:891637..892129	1690881110.5153213-CDS-C-linearis_contig8:891637..892129	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig8 891638..892129 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig8:890030..892441+
coding sequence from alignment at C-linearis_contig8:890030..892441+

protein sequence of mRNA_C-linearis_contig8.15509.1

>prot_C-linearis_contig8.15509.1 ID=prot_C-linearis_contig8.15509.1|Name=mRNA_C-linearis_contig8.15509.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=164bp
MKFVLLFCMFRSYRRRRAGFVSQQQTAGSHGGVASAVGGLCEHATIAFRH
MALRLLKKTKVVGVGIESGNYAAVKEAVATARSGGHLGDDEHNDVMAMVE
GAERRGVWPVVETESNQYVVLDTRTRTSEHDWACVKFNQGGGARRMTPGR
SFMCRVSLQNDAL*

mRNA from alignment at C-linearis_contig8:890030..892441+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig8.15509.1 ID=mRNA_C-linearis_contig8.15509.1|Name=mRNA_C-linearis_contig8.15509.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2412bp|location=Sequence derived from alignment at C-linearis_contig8:890030..892441+ (Chordaria linearis ClinC8C monoicous)
GCGAGGAGAGGCCTGACTGCAAGAGATGGGTCTACAAGTCGAGGGATCGC
AACTGCTGGGCCGATTTCAACACAACCGAAGCCTCATCGGAAAGGTGTTG
CAAACACCACGACAACTTGAGGAGCAAGTGCGGCTGCTTCGCGTAAGTGT
CGTCCTTAGAGACCCCGCTGTTCGCGTTGCTGTGTATTGTCGATTGGTCA
TGCAATGCGAACCTCATGCCACAATTGAGAAAATAATAAAAATAAACCTC
GAGGCCAAGTCGAGGCAATCATATTTTTCAATTAGAAAAATGAGAAAAAC
AGGCATGTGCTCTGTACCCGAACATGAACATTTCAACATTTCGAATCTGT
CCAGAAACTTACATGTAGTTGCAATCTCTACGGCGCTGCTGTGAGCATCA
TTTTTGTTGTCGACTAGATAGTGGAAACTTTTTTGCGCACGGCCAGCCTG
GAGGTGGCAGGCGAACCCTTTTGATCTGGTGAGAAAGAAGCGCAACGGAT
TCGGCTTGTGGCGTCCAATTTCTTTGAAATGGATGCGTGCATGCGTGCAT
GCGTGCATGCGTGCATGCGTGCATGCGTGCAGGAAACCGCGCCGATATGT
GTGCCATGGAAGTCCTTCAGTCCAAGTCGGCCCGTTGTCTCGGTACCCTT
GCTTCTCCCTCTCGTCGTCGATTTTTTTTTGCTTCACCCGATGGATCGAT
GCAGGTGTGGTAACAGGCGCAAGGCTGTCCAGGCAGGGGGGCGTGGAGGC
GCGGGACGAGGGCATGGGCAAGGACGAGGACACGCATCTCGGAATGGGCG
AGGACGAGGACGCACAGCGCGCGCCGGTGGGAGGAGGGCGGCTAGGCCGG
TGGGGACAGTCTTCGAATTACCGCGCTGCGAAGGCGATGAGAGCGCTACA
GTTGTTGTGCGAACCGGGAATGCTGACAAGTGGGTAGTGACATCCGTGAA
CCGGCGCCTCCAAACTTCCAGCTGCTCGAGGACAAGTTGTCAAGGGTGAG
GCTCATGACAACAAAATTTAGCCGCGAAAGTGGTTCTAGTCCGTGGCCTC
GCTTTGCGACCGTCCTGTGACGGTCCCTATGAATGGGGGTCTCACACACC
CACGACAATGTTGGCATCATCAACCCAAACACGGCGACACTGCTCGCTCG
GCCCAGAAGCAAAGGTGCTAGGCTGTACGCTCCATGCCTAGCAACTTTTC
GTGATAACCATCAGCTATGGCCTGAGATAGCACGGGCGTTGAGGGGGGGT
GTAGGTGACTTCAACAATTTGTCGGGGTTTGATCCCTTCTGCTGCGGGCG
GGGGCGCGCGCCAGACCAAAATCCGTGTCATATTGCCGAAAGACCCATTG
GTCCTCAGGCGAAGGGTCGTCCTGTTTAGATGCGTCGATGTGAACATGGT
TGCCTGCTCTATTGTATAAGAAGCGTGTTTTGCGGCCACCCCGCGGGTGT
CATGTTCCCACCCATTGAATGTGGCGCCAGGCTCGAGACATGTGGTGTCA
TCTTCGGAGTGCAGACCTTGCGTGGCCTGGCATCGAGGAACAAGCTAAAC
TAGTGTCAGCGAAGACTAGTCCAAATTTTTCGTCAAGAGCAGCTTCCATA
TCACGTGCATGAAATTCGTTTTATTATTTTGTATGTTTCGGTCATATCGC
AGGAGAAGGGCCGGGTTCGTATCACAGCAACAGACGGCAGGGAGTCACGG
CGGGGTGGCTAGCGCCGTTGGAGGCCTGTGCGAGCACGCCACCATAGCGT
TCAGGCATATGGCGTTGAGGTTGTTGAAGAAAACGAAGGTGGTCGGAGTT
GGGATTGAAAGTGGGAACTACGCCGCCGTGAAGGAGGCCGTGGCAACGGC
GAGGTCGGGTGGTCACTTGGGGGACGACGAGCACAACGATGTGATGGCCA
TGGTGGAGGGAGCAGAGCGTCGCGGCGTGTGGCCGGTGGTCGAAACAGAA
AGCAACCAATATGTGGTTCTTGACACCCGGACTCGAACGTCGGAGCACGA
CTGGGCGTGCGTCAAGTTCAACCAGGGGGGGGGGGCTCGAAGGATGACAC
CTGGGAGGAGCTTCATGTGCAGGGTAAGCTTACAAAATGATGCGTTGTAG
CTGATGTTATTGCAATTGTTGGCGAAACTATGGTACTCACGAGTTTTCTC
TCCCGAGCTTGGGCGACTCAGCAAGTATTGCCGTGACACGCATGAGGGGA
AGCTTTGGTGTTTGGCGACTCTGCAAACACAAGCAGGAGATTTGGAAGAC
GAATGCAGAGCACGTCTGGGTAGCATTTTTCTTCGAGATGTTCTACGAAT
GCTGTGTCAGTATGTTCACCATAGGCGAACGACCACGACGCGAGGCATGC
AGCCGAGGCCGAGCTACAACTGCTGCAAGAACAAGTAAGAGTAAGGGATA
AGGAGTTGGCCG

Coding sequence (CDS) from alignment at C-linearis_contig8:890030..892441+

>mRNA_C-linearis_contig8.15509.1 ID=mRNA_C-linearis_contig8.15509.1|Name=mRNA_C-linearis_contig8.15509.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at C-linearis_contig8:890030..892441+ (Chordaria linearis ClinC8C monoicous)
ATGAAATTCGTTTTATTATTTTGTATGTTTCGGTCATATCGCAGGAGAAG
GGCCGGGTTCGTATCACAGCAACAGACGGCAGGGAGTCACGGCGGGGTGG
CTAGCGCCGTTGGAGGCCTGTGCGAGCACGCCACCATAGCGTTCAGGCAT
ATGGCGTTGAGGTTGTTGAAGAAAACGAAGGTGGTCGGAGTTGGGATTGA
AAGTGGGAACTACGCCGCCGTGAAGGAGGCCGTGGCAACGGCGAGGTCGG
GTGGTCACTTGGGGGACGACGAGCACAACGATGTGATGGCCATGGTGGAG
GGAGCAGAGCGTCGCGGCGTGTGGCCGGTGGTCGAAACAGAAAGCAACCA
ATATGTGGTTCTTGACACCCGGACTCGAACGTCGGAGCACGACTGGGCGT
GCGTCAAGTTCAACCAGGGGGGGGGGGCTCGAAGGATGACACCTGGGAGG
AGCTTCATGTGCAGGGTAAGCTTACAAAATGATGCGTTGTAGATGAAATT
CGTTTTATTATTTTGTATGTTTCGGTCATATCGCAGGAGAAGGGCCGGGT
TCGTATCACAGCAACAGACGGCAGGGAGTCACGGCGGGGTGGCTAGCGCC
GTTGGAGGCCTGTGCGAGCACGCCACCATAGCGTTCAGGCATATGGCGTT
GAGGTTGTTGAAGAAAACGAAGGTGGTCGGAGTTGGGATTGAAAGTGGGA
ACTACGCCGCCGTGAAGGAGGCCGTGGCAACGGCGAGGTCGGGTGGTCAC
TTGGGGGACGACGAGCACAACGATGTGATGGCCATGGTGGAGGGAGCAGA
GCGTCGCGGCGTGTGGCCGGTGGTCGAAACAGAAAGCAACCAATATGTGG
TTCTTGACACCCGGACTCGAACGTCGGAGCACGACTGGGCGTGCGTCAAG
TTCAACCAGGGGGGGGGGGCTCGAAGGATGACACCTGGGAGGAGCTTCAT
GTGCAGGGTAAGCTTACAAAATGATGCGTTGTAG