mRNA_C-linearis_contig75.15067.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig75.15067.1
Unique NamemRNA_C-linearis_contig75.15067.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: D7FQ82_ECTSI (3-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ82_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 7.600e-153
Identity = 253/301 (84.05%), Postives = 274/301 (91.03%), Query Frame = 2 
Query:   41 MKLAAVSTVSMACMAGFASSFVLPSSSLSSRVARPVSRTSLASSTGGGSRSYASPRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIGA 943
            MKLA   T+S+ACMAG+A +FV+P ++ SS  A+P +R  L+++  GGS     PRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEE +K+IQEAGGKAAAVKADVSK DEV  LF ++A AFP+E IEVVVNNAGITRDTL MRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRI+NISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFA RGVTVNAVCPGFIESDMTA+LDQDAIKKMIPLGRLGKP+EIAGMVKFIATEDSAAYITGQ+FTVDGGMAIGA
Sbjct:    1 MKLA---TLSIACMAGYARAFVVPPAARSS-FAQPAARAGLSTAAVGGS-----PRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 292
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: A0A835YXE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE5_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.840e-104
Identity = 170/244 (69.67%), Postives = 202/244 (82.79%), Query Frame = 2 
Query:  209 MSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIG 940
            M IA+VTG+SRG+GAAIA  LA  GC V++NYAASSGAA+  +  I+  GG+A A++AD SKL +V A+FK + EAFP +N+EV+VNNAGITRDTL +RMKPDQWQ VIDLNL+GVFY SQAA K MLK+R GRIVNISS+VG IGNPGQANYAAAK GVI MT +M +EFA RGVTVNAVCPGFIESDMTA+L  DAIK MIP+ RLGK  E+AG+V ++AT+ SA YITG +F VDGG+AIG
Sbjct:    1 MKIAVVTGSSRGIGAAIAASLAEKGCKVVINYAASSGAADAVVADIKAKGGEAVAIQADCSKLADVEAMFKGAVEAFPGDNVEVLVNNAGITRDTLVLRMKPDQWQDVIDLNLTGVFYCSQAAAKTMLKKRAGRIVNISSVVGQIGNPGQANYAAAKGGVIAMTRTMGKEFASRGVTVNAVCPGFIESDMTADLQLDAIKAMIPMARLGKASEVAGLVTYLATDPSADYITGHTFNVDGGIAIG 244
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: A0A2V3ICR5_9FLOR (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICR5_9FLOR)

HSP 1 Score: 301 bits (772), Expect = 1.230e-93
Identity = 163/256 (63.67%), Postives = 203/256 (79.30%), Query Frame = 2 
Query:  188 RSYASPRMS----IAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIGA 943
            R  ++P MS    +A+VTG+SRG+G AIA +L   GC+V+VNY +S+ AAEE +  I+ +GG A AVK +VSK D+V ALFK + + F    I+VVVNNAGITRDTL +RMK DQWQ VIDLNL+GVF  +QAA KLMLKQR GRIVNI+S+VGLIGNPGQ NY AAKAGVIG+TMS A+E A RG+TVNAV PGFI SDMTA L  D IKKMIP+ R G+PEE+AG+V+++A + S+AYITG +F+VDGG+AIG+
Sbjct:   50 RPISTPSMSADGKVALVTGSSRGIGKAIALELGKHGCNVVVNYTSSADAAEEVVTTIKSSGGDAIAVKGNVSKSDQVDALFKAAKDHFG--RIDVVVNNAGITRDTLMLRMKQDQWQDVIDLNLTGVFLCTQAAAKLMLKQRSGRIVNITSVVGLIGNPGQVNYGAAKAGVIGLTMSAAKECASRGITVNAVAPGFINSDMTANLPVDDIKKMIPMNRFGEPEEVAGLVRYLALDPSSAYITGHTFSVDGGIAIGS 303
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: F0Y3V7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3V7_AURAN)

HSP 1 Score: 298 bits (762), Expect = 6.810e-93
Identity = 158/244 (64.75%), Postives = 198/244 (81.15%), Query Frame = 2 
Query:  221 IVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKM---IPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIGA 943
            +VTGASRG+G AIA DL   GC+V+VNYAAS G A E ++AI+ +GG A AVKAD++ +DE+ ALFKE+A+ F     +V+VNNAGIT+D LAMRMKP QWQ+VID+NLSGVFY SQAA   M K+R GRI+N+SS+VGL GNPGQANYAAAK GV G+TMS A+EFAGRGVTVNAVCPGFI ++M  EL +D + K+   IPLGRLG+ +E+AG+V+++A + SAAYITG S T+DGG+AIGA
Sbjct:    9 VVTGASRGIGRAIALDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAVAVKADMASVDEIKALFKETADHFG--GCDVLVNNAGITKDGLAMRMKPAQWQAVIDVNLSGVFYCSQAAFTQMAKKRAGRIINMSSVVGLFGNPGQANYAAAKGGVCGLTMSNAKEFAGRGVTVNAVCPGFIGTEMANELGEDMLNKVKEAIPLGRLGEADEVAGLVRYLALDKSAAYITGHSMTIDGGIAIGA 250
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: B4VS33_9CYAN (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VS33_9CYAN)

HSP 1 Score: 296 bits (759), Expect = 1.960e-92
Identity = 155/241 (64.32%), Postives = 195/241 (80.91%), Query Frame = 2 
Query:  215 IAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAI 937
            +AI+TGASRG+G A+A  LA  G  V+VNYA+SSGAA+E +  I EAGG A A++ADVSKLDEV  L KE+ + F    ++V+VNNAGITRDTL MRMKPD WQ+VIDLNL+GVF+ ++AA K+MLKQ+ GRI+NI+S+ G +GNPGQANY+AAKAGVIG T ++A+E A RG+TVNAV PGFIE+DMT ++  + I K IPLGR GKPEEIAGMV+F+A + +AAYITGQ F VDGGM +
Sbjct:   14 VAIITGASRGIGRAVAFALAAEGAKVVVNYASSSGAADEVVAKITEAGGDAIALQADVSKLDEVETLVKETKDKFG--RLDVLVNNAGITRDTLLMRMKPDDWQAVIDLNLTGVFFCTRAASKIMLKQKSGRIINIASVAGQMGNPGQANYSAAKAGVIGFTKTVAKELASRGITVNAVAPGFIETDMTKDIKSEDIIKYIPLGRYGKPEEIAGMVRFLAADPAAAYITGQVFNVDGGMVM 252
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: Q00GM6_KARBR (Plastid beta-ketoacyl-ACP reductase protein n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GM6_KARBR)

HSP 1 Score: 298 bits (762), Expect = 9.390e-92
Identity = 164/255 (64.31%), Postives = 196/255 (76.86%), Query Frame = 2 
Query:  185 SRSYASPRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIG 940
            S S A     + IVTG SRGLG AIA DLA  GC +IVNYAAS+ AAEE ++ I++ GG   AV+AD+S  + V  LFK +AEAF +E + V+VNNAGITRD L MRMKP QW  VI+ NL+GVF+ +QAA K+MLK+RKGRI+NI+S+VG IGNPGQANYAAAK GVI MTMSMAREF  RG+TVNAV PGFIESDMTAEL Q+ +    K IPLGR GKPEE+AG+VK++A + SA YITG    VDGG+AIG
Sbjct:   76 SPSMADAEKPVVIVTGGSRGLGKAIALDLAKEGCKIIVNYAASAAAAEEVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAF-DEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVKYLALDPSALYITGHCLNVDGGIAIG 329
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BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: UPI001882A5CA (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001882A5CA)

HSP 1 Score: 294 bits (752), Expect = 2.220e-91
Identity = 155/241 (64.32%), Postives = 196/241 (81.33%), Query Frame = 2 
Query:  215 IAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAI 937
            +AIVTGASRG+G AIA  LA  G  V+VNYA+SSGAAE+ + AI +AGG A A +ADVSKL++V AL  ++ E F    I+V+VNNAGITRDTL +RMKP+ WQ+VIDLNL+GVF  ++AA K+MLKQ+ GRI+NI+S+ G +GNPGQANY+AAKAGVIG T ++A+E A RG+TVNAV PGFIE+DMT++L  D I K IPLGR GKPE+IAGMV+F+A +++AAYITGQ F VDGGM +
Sbjct:   15 VAIVTGASRGIGRAIALALAAEGAKVVVNYASSSGAAEQVVAAITDAGGNAIASQADVSKLEQVEALVNQTLEHFG--RIDVLVNNAGITRDTLLLRMKPEDWQAVIDLNLTGVFLCTRAASKVMLKQKSGRIINIASVAGQMGNPGQANYSAAKAGVIGFTKTVAKELASRGITVNAVAPGFIETDMTSDLKSDDIVKYIPLGRYGKPEDIAGMVRFLAADEAAAYITGQVFNVDGGMVM 253
[Close]
BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: X5CV96_9EUKA (FabG n=2 Tax=Eukaryota TaxID=2759 RepID=X5CV96_9EUKA)

HSP 1 Score: 295 bits (755), Expect = 3.250e-91
Identity = 157/245 (64.08%), Postives = 196/245 (80.00%), Query Frame = 2 
Query:  215 IAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIG 940
            + IVTG SRGLG AIA  L   GC V+VNYAAS+ AAE+ ++ I+  GG   AV+AD+S ++ ++ALF+ +A+AFP+  +EV+VNNAGITRDTL +RMKP+QW+ VI+ NL+GVFY SQAA K+MLK+RKGRI+NI+S+VG IGNPGQANYAAAK GVI MTM+MA+EFA RGVTVNAV PGFI SDMT EL  D I+   K IP+GR GKPEE+AG+VK++A + SA YITG    VDGG+AIG
Sbjct:   51 VCIVTGGSRGLGRAIALKLGSEGCRVVVNYAASAEAAEKVVEEIKGLGGDGVAVQADMSSIEGISALFEATAKAFPDP-VEVLVNNAGITRDTLVLRMKPNQWEDVINTNLNGVFYASQAAAKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMTMAKEFASRGVTVNAVAPGFISSDMTDELPADIIEQVTKSIPVGRFGKPEEVAGLVKYLALDPSADYITGHCINVDGGIAIG 294
[Close]
BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: A0A8J2WZY6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZY6_9STRA)

HSP 1 Score: 294 bits (753), Expect = 4.320e-91
Identity = 154/244 (63.11%), Postives = 197/244 (80.74%), Query Frame = 2 
Query:  221 IVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKM---IPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIGA 943
            +VTGASRG+GAAIAKDL   GC+V+VNYAAS G A E ++AI+ +GG A A+KA++++LD++ A+FK+ A  F     +V+VNNAGIT+D LAMRMKP QWQ VID+NLSGVFY SQ A   M K+RKGRI+N+SS+VGL GNPGQANYA+AK GV G+TMS A+EFA RGVTVNAVCPGFI ++M  EL +D ++K+   IPLGRLG  EE+AG+V+++A ++SA YITG S T+DGG+AIGA
Sbjct:   41 VVTGASRGIGAAIAKDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAIAIKANMAELDDIKAMFKQVASEFG--GCDVLVNNAGITKDGLAMRMKPTQWQDVIDVNLSGVFYCSQQAFNQMAKKRKGRIINMSSVVGLFGNPGQANYASAKGGVCGLTMSNAKEFAARGVTVNAVCPGFIGTEMANELGEDMLEKVKSAIPLGRLGAAEEVAGLVRYLALDESAGYITGHSLTIDGGIAIGA 282
[Close]
BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Match: A0A0V7ZG77_9CYAN (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZG77_9CYAN)

HSP 1 Score: 293 bits (750), Expect = 5.390e-91
Identity = 153/244 (62.70%), Postives = 197/244 (80.74%), Query Frame = 2 
Query:  206 RMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMKAIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRDTLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAI 937
            R  +A+VTGASRG+G AIA +LA  G +V VNYA+SSGAAEE ++AI +AGG A A++ADVSK ++V AL K   E F  + ++++VNNAGITRDTL +RMKP+ WQ+VIDLNL+GVF  ++A  K+MLKQR GRI+NI+S+ G +GNPGQANY+AAKAGVIG+T ++A+EFA R +TVNAV PGFI +DMT +L  D I K IPLGR GKPEE+AGMV+F+A++ +AAYITGQ F VDGGM +
Sbjct:   18 RSQVAVVTGASRGIGRAIALELAKMGATVAVNYASSSGAAEELVEAITKAGGSAIALQADVSKAEQVDALIKAVMEKF--KRVDILVNNAGITRDTLLLRMKPEDWQAVIDLNLTGVFLCTRATSKIMLKQRSGRIINIASVAGQMGNPGQANYSAAKAGVIGLTKTLAKEFAAREITVNAVAPGFIATDMTNDLKNDEILKYIPLGRFGKPEEVAGMVRFLASDPAAAYITGQVFNVDGGMVM 259
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig75.15067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ82_ECTSI7.600e-15384.053-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxo... [more]
A0A835YXE5_9STRA1.840e-10469.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V3ICR5_9FLOR1.230e-9363.673-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
F0Y3V7_AURAN6.810e-9364.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
B4VS33_9CYAN1.960e-9264.323-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
Q00GM6_KARBR9.390e-9264.31Plastid beta-ketoacyl-ACP reductase protein n=1 Ta... [more]
UPI001882A5CA2.220e-9164.323-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
X5CV96_9EUKA3.250e-9164.08FabG n=2 Tax=Eukaryota TaxID=2759 RepID=X5CV96_9EU... [more]
A0A8J2WZY6_9STRA4.320e-9163.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0V7ZG77_9CYAN5.390e-9162.703-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig75contigC-linearis_contig75:27341..32621 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.1
Seed ortholog evalue1.3e-125
Seed eggNOG ortholog2880.D7FQ82
KEGG rclassRC00029,RC00117
KEGG koko:K00059
KEGG ReactionR04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0031967,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0055114
EggNOG free text desc.3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity
EggNOG OGsCOG1028@1,KOG1200@2759
Ec32 ortholog description3-ketoacyl-(acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase.
Ec32 orthologEc-01_007100.1
EC1.1.1.100
COG Functional cat.IQ
BiGG ReactioniRC1080.CRv4_Au5_s3_g10590_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons7
Model size2098
Cds size906
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930424.560089-UTR-C-linearis_contig75:27340..284921622930424.560089-UTR-C-linearis_contig75:27340..28492Chordaria linearis ClinC8C monoicousUTRC-linearis_contig75 27341..28492 -
1690881062.6140692-UTR-C-linearis_contig75:27340..284921690881062.6140692-UTR-C-linearis_contig75:27340..28492Chordaria linearis ClinC8C monoicousUTRC-linearis_contig75 27341..28492 -
1622930424.701333-UTR-C-linearis_contig75:32581..326211622930424.701333-UTR-C-linearis_contig75:32581..32621Chordaria linearis ClinC8C monoicousUTRC-linearis_contig75 32582..32621 -
1690881062.7213712-UTR-C-linearis_contig75:32581..326211690881062.7213712-UTR-C-linearis_contig75:32581..32621Chordaria linearis ClinC8C monoicousUTRC-linearis_contig75 32582..32621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930424.5765712-CDS-C-linearis_contig75:28492..285741622930424.5765712-CDS-C-linearis_contig75:28492..28574Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 28493..28574 -
1690881062.626043-CDS-C-linearis_contig75:28492..285741690881062.626043-CDS-C-linearis_contig75:28492..28574Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 28493..28574 -
1622930424.5985892-CDS-C-linearis_contig75:29186..293711622930424.5985892-CDS-C-linearis_contig75:29186..29371Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 29187..29371 -
1690881062.6366842-CDS-C-linearis_contig75:29186..293711690881062.6366842-CDS-C-linearis_contig75:29186..29371Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 29187..29371 -
1622930424.6163437-CDS-C-linearis_contig75:29762..299121622930424.6163437-CDS-C-linearis_contig75:29762..29912Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 29763..29912 -
1690881062.6492486-CDS-C-linearis_contig75:29762..299121690881062.6492486-CDS-C-linearis_contig75:29762..29912Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 29763..29912 -
1622930424.6349914-CDS-C-linearis_contig75:30255..303271622930424.6349914-CDS-C-linearis_contig75:30255..30327Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 30256..30327 -
1690881062.6626062-CDS-C-linearis_contig75:30255..303271690881062.6626062-CDS-C-linearis_contig75:30255..30327Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 30256..30327 -
1622930424.6498165-CDS-C-linearis_contig75:30845..309671622930424.6498165-CDS-C-linearis_contig75:30845..30967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 30846..30967 -
1690881062.676475-CDS-C-linearis_contig75:30845..309671690881062.676475-CDS-C-linearis_contig75:30845..30967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 30846..30967 -
1622930424.6671042-CDS-C-linearis_contig75:31143..312491622930424.6671042-CDS-C-linearis_contig75:31143..31249Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 31144..31249 -
1690881062.6926959-CDS-C-linearis_contig75:31143..312491690881062.6926959-CDS-C-linearis_contig75:31143..31249Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 31144..31249 -
1622930424.685138-CDS-C-linearis_contig75:32392..325811622930424.685138-CDS-C-linearis_contig75:32392..32581Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 32393..32581 -
1690881062.7052195-CDS-C-linearis_contig75:32392..325811690881062.7052195-CDS-C-linearis_contig75:32392..32581Chordaria linearis ClinC8C monoicousCDSC-linearis_contig75 32393..32581 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig75.15067.1prot_C-linearis_contig75.15067.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig75 28493..32581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig75.15067.1

>prot_C-linearis_contig75.15067.1 ID=prot_C-linearis_contig75.15067.1|Name=mRNA_C-linearis_contig75.15067.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=302bp
MKLAAVSTVSMACMAGFASSFVLPSSSLSSRVARPVSRTSLASSTGGGSR
SYASPRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEAMK
AIQEAGGKAAAVKADVSKLDEVTALFKESAEAFPEENIEVVVNNAGITRD
TLAMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIVNISSIVGL
IGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAEL
DQDAIKKMIPLGRLGKPEEIAGMVKFIATEDSAAYITGQSFTVDGGMAIG
A*
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mRNA from alignment at C-linearis_contig75:27341..32621-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig75.15067.1 ID=mRNA_C-linearis_contig75.15067.1|Name=mRNA_C-linearis_contig75.15067.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5281bp|location=Sequence derived from alignment at C-linearis_contig75:27341..32621- (Chordaria linearis ClinC8C monoicous)
CAACCACTTTTGTCTTCGGCTCACCCCAACATCCACCGAGATGAAGCTGG
CCGCCGTCTCCACCGTCTCCATGGCCTGTATGGCTGGCTTCGCCAGCTCG
TTCGTGTTGCCTTCTTCGTCCTTGAGCAGCAGAGTTGCGCGGCCCGTTTC
GCGCACTTCCCTTGCCAGCAGCACCGGCGGCGGCAGCCGTTCCTACGCCT
CTCCGCGGATGAGCATTGCTATTGTCACGGTGAGGATCATTGCGCACGCA
AGGCTTGAGTGGGTTTGATCTGTCGTGGGAGTCGTTGCGCGTTTTGAGGC
GTATTTCGAAACATGCCAGGAGGATGATCCCGAGTTTTTTTGCGGCTGTT
GTGCGCACACATCTTGCGTCACACCCGAGGCTCCGAAACCGCAGAACAAT
CGCGCTTGTGGGGAGTAGTGGGGCATGTTTTGGCAGGGAAGCAAGCCGTG
TGTATGTGCTACCCGTGACCTCAACACATTTTGTACCACGAAAGACATAC
CATGCATACATGTTCGTGTTTGGAGTACACACGTGAGCACACCAGACCAC
ATGGCGACAGACAAGACGAGACTCCACGTTCCTTGAATTGACAGCTGGGG
CTACGTGCCCACCTAGTGCTGAATACATACAACCTTGCCAGGGGCCACCT
CAAAGCAATAGCTACACGCAAGCGGCTTGTAAACGTGTGTAAGCACGCCG
TTTCTTGCAAAAGGGGCGTTGTCACGAACACAAGAAAGATGTCAGACCCA
CACGACACCAAAAACCGACACTTGCCTGTATTCTCGGCCGTTGGTCCGGC
TATCCGGCGGGCCGCGTGTCGTGCGTCTATGTACATGTTTCCCGTACTTG
ATCGCTTCAGCTACTAGACTACGCACGTTGTGCACCCCTTCGCGGTGAAA
CCTGTGCTGCTGCAGCATGGCAGGTTGCTCGTTGCTCTCGAACAGCCAAC
CCTCAGCTTCCGCGGTAGAGTATACTAACTCGATTACGGCAACGAATGAC
ATGTGAGGTTGTCCCTACGGCGGCGAGATTACTGCTATCACGGCCGAAAT
CCTCCACTTTGAAACGAGCTGCGCGTCGTGGGAAGCTCTCGAAGCATCCT
CGAAGGCGTACACACTTCTCCCTCATAACGCCGCAAAGCTCCCCATTTTT
TCAAGATGCAGCAAAAGGAATTGATTGCTGAACCCACGCTGCGTTTGACT
CAAAAGATGGCTACTGCTGTCGACTACTACCCACTTCTCCCTGGTCCGGG
CAACCATCGATGACCAAACGTACGGTAGTGCTCCTGTCATGAACCGCTTG
TTCTTCACGTCCCCGTTGTTATTTGCTTGATTTTTTTATGTCTTGATCTT
GACGGCTATCCTCCGAGAGCAGGGAGCAAGCCGCGGTCTGGGCGCGGCGA
TCGCCAAGGACCTCGCCGGTGCGGGCTGCAGCGTGATCGTCAATTATGCG
GCGTCCTCGGGGGCAGCCGAAGAGGCAAGTCAGGGGGTGCAGCAAAACTG
AGATGGATGACGTGGAGGCAGGCCATTTTTTCAGCAGTAAGTGGAGTTCA
CAGCCCAACATTGTCTATTGTATGTAGCGCGCTGCGCTCTGCCCGCCCTC
TAGCACAAAACAACAAAAACAACCGTTCTCAATGGATGAAAACAAAACAG
GTAGTGAAGGCCATCCAGGAGGCCGGAGGCAAGGCCGCGGCCGTGAAGGC
GGACGTCTCCAAGTTGGACGAAGTGACGGCGCTCTTCAAGGAATCCGCGG
AGGCTTTCCCCGAGGAGAATATCGAGGTAGGTGGCCGGTGCGGGGAGGGG
TGAGGTTGGGCAGGGCGCTGTAAGCGGGGGGAAAGCAACACGGCGGCATT
GGCAAAGATGGCAATCTAAATAGTGCGCCCATGCGCCCTGTGTTGGGTGT
TACGGTATTTCCCCCCTCCAGTCCAGTGGGTGTGAAGAACGTACGTGCCG
CCGATTGGCGGATAACATCTCTGCTGCTTGTGTGTGTGTGTGTGTTCAGG
GTGTGCATACCCTCGCTAGTCGGTTGAGTGGTGATGTTGTAGTTCCCTTT
TAGCTTTCCGAAACGGATCGGAATCGGCATGTTTTGTGGGTGGAACAGGG
TCAGGGAGCTTCACGGCAGTTCCGCTTGCATCTGTACTAGTCCAACGTGC
GAAGAACGTCGTTCCACGGTCAGTGGCTACACCTTGAAGAACGAAAGGTC
GAGAGGATGAAAAATTCGTGGAATGGAAGCCTGACAGCAGTCGTACCTCA
TGCGCGCGTACGGCGCTTGACTCGGCTCGACGCCACCGACCCAGGTGGTC
GTGAACAACGCCGGCATCACGCGGGACACCCTGGCCATGCGGATGAAGCC
CGACCAGTGGCAATCGGTGCGTAGCGAGGTTGCATGCCGCAGACGGCTAG
CTGTGCGTGAAGCATTGCTTTTTTGGCGTGGGTCTGCATGGGGTCTGCTT
TCGTCTCCTTTCTTCAACCAGCGAGTGCCTTGAGAAATTGTTGATTCGCG
CCGTTGGCAAAGGTGGTTTTGGTGTGCCACCGCCAAAATACACCATGTGG
AAAGGCACCAGGTATTTATATTTGGTTGCAACCCCTGGCTGGAAGTTCGG
CCACTGCTTGTAGAATAGCGACCTTGGTCGGTCGGCTTTTCGGTCTCTGA
CTCTCCGGGCCCTCCCACCTACCTGGTACATGTTTTTGTCTCGTTTCGCG
TTTTTTCAGGTGATCGACCTGAACCTGAGCGGGGTGTTCTACGTCTCCCA
GGCGGCGTGCAAGCTCATGCTCAAGCAGCGCAAGGGCCGCATCGTCAACA
TATCGTCCATCGTGGGTCTCATTGGCAACCCCGGACAAGCCAACTATGCC
GCTGCAAAGGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAAAGCTACAG
CAGTGAGAGGAAGCTGAGAGGAGGTGCCGACAAGTGTGCGGTGGCTCGGC
ACCGGACTGGCCGAATACACCCACCGTTTGGGCAGCAGATTTTTTGTGTT
GTGCTTTGTCTAGTCGCCTCCTTTTTTTTCAGAAGAGGAGCGTCACCCCC
CAACCGCTCCGATTTTGTGTCACGGGGCGCTACAACCCTACGTGTCTCAC
ATGTCGCATGTCACATCTCGGCGTAAACACGGCAAAAACAGAAAGGCTCG
GCGATAAAATGTGCACCTCCGGCTCCTCCCCGTGCCCTCTCTCCGTGTTG
TTTTTGCCTGCGCCCTCCCTTCACTTCCCTACGCACCGATCACTGGCAAG
GCTGGCGTGATCGGCATGACGATGTCCATGGCGAGAGAGTTCGCGGGGCG
AGGCGTGACCGTGAACGCGGTGTGCCCGGGCTTCATCGAGAGCGACATGA
CCGCCGAGCTGGACCAAGACGCCATCAAGAAGATGATCCCCCTCGGCAGG
CTCGGAAAGCCGGAAGAGATCGCGGGGATGGTCAAGTGAGTCTTGTCTCT
GTCGGCTATGTTGTTGTCGATGTGATTGGCTCCGCGCCTAGGCCCCAATA
TAGCTCTCGGGTCCGTGGTCGCAGGCGCAGGCGGCATTTCCTTGTCCATA
CCGCACCATGTGTCGCTGTATCTTGGCGCTAGAGAGTAGGACTTCATGGT
TTGTAGGGGATGGTACTGCTGCGTAAGAGGCGTTGTTTTTCCCCGGGACG
TTTTCTTCCGGTAGTATTTCGATCATGTTGAGAGATAGCTTCATCCATCT
GCGTATACTGATGGTTGGAACCCAGCTTTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTTTGAGGAGCGGGAAGTTAGTGAGAGCGAGGGTTGGTGGGCCGG
TCGTGGGTTTTGCTTCCTTGGCGCTAGTTGTGCTTGCATTTTATGTTTTT
ATTGTTTTGCTTCCACGACTATTGCTGTTTTTATTTTTTTACAACAACGT
CGTGTCTACGATTGCATATTGATTCAACCCCCCTGCCCGCCCCCTTCAAT
GCCTCGTCCGATTGGATCGGGTGTGCGTACTTTGTTTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGCTCGCTATTTCCGCCGCTGCGAAAGGTT
CATCGCCACGGAGGACAGCGCGGCGTACATCACGGGCCAGAGCTTCACCG
TGGACGGCGGAATGGCCATCGGCGCATGAAAGAGAGAGCGTGACTTAGAT
TTTGAGTTCAGCCGCGCCTCGCGGCTCGGACCGGCCGACCGACCGCCCTA
GAGTCACAGTCATCGAGACCAGTACCGCTACCGACACGTATGGAAGGAAT
GCTCAAGTGGAAGCCGCATGGCGCGCGACGAAATAGTCTTCGTCCAAAAA
CCGGAAGCGTTTTGGGCGGGGAGCAAGCGCTCGATCTTAATAGCGCTGAT
TTCGAGCCCCAACACCCAGGCTAACCCCGGGCTTCGGATGTACCGCTGCG
ACGTAGTATACGACGGTAGAATTCTGTCGTGCCCCCACACAGCACCCCTT
CCTTCTTGTCGGGAGCGGTGGAAGATAGCAGGCAGAAGAGCAGGGCCGTT
GGGTTGCCTAAATTTGCGAGCGGTGTGGCCACCGGTGGCTTTGCTCTCTT
GCTACGCGGGTTAGAACGCGTCATCTGCAAAATAGATTTTACAGCAGCAC
ATTTAGCGCGCTACTTCTACTTGGATCGCACTGTGTTGTGTTGCGTATCG
TAAAAGCACTCAGTCCAGGGAGACAAAAAGGCGTGGCGCTGGGGCGAAAG
TGCCGTTGGTGTAGGTTAGGTTTAGGGCTAGAATGCTGTGCATGCACTAC
GAACGGGCAGCAGTGGTCGGTTGAAGACGTGTTTGGTGGAGGATAAATGT
AGCAGCAGGTTCTGTCAATGGAGAGGGTACTGGGGTCTAGTTGGCAGGTT
ATGTATATCGCGACGCTCTTAGCGGTGCAGCCCCGCCCCCTCCTTTGACA
ACCCCTTCCACGTACACATATTGTTACCTCAGAGGCATGCATGGCTTGCT
CTTCGATCGCAGCAATTGCTGCATGTGCGTGTTTGTGGGGGTCATTGTGT
TTCGTCAAGTTCGCCAACGTATCCTCCAGCGTGCGAGGTAGACCGGCGCA
CGTGTCCGGTGTATGCGCTTGTTAAGGTGGCGAGACGCGCTTGTGGCGCC
CGCTTCCTCCAACTCTGCCTTGGTTCGCTGCCGACATGTTCGACTGATCT
TGGCGGATGCGGTGTTTTTTTTATTTACAGCGCGGAAAGGTAGAGAAGAT
GTAAGGTGGAAGCGACAATAAAAGCCTTCCGTGGAAAAGAGCCGCAACTG
GCGGAAGGCGCAACTTCTGCCCGCCCACCAA
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Coding sequence (CDS) from alignment at C-linearis_contig75:27341..32621-

>mRNA_C-linearis_contig75.15067.1 ID=mRNA_C-linearis_contig75.15067.1|Name=mRNA_C-linearis_contig75.15067.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at C-linearis_contig75:27341..32621- (Chordaria linearis ClinC8C monoicous)
ATGAAGCTGGCCGCCGTCTCCACCGTCTCCATGGCCTGTATGGCTGGCTT
CGCCAGCTCGTTCGTGTTGCCTTCTTCGTCCTTGAGCAGCAGAGTTGCGC
GGCCCGTTTCGCGCACTTCCCTTGCCAGCAGCACCGGCGGCGGCAGCCGT
TCCTACGCCTCTCCGCGGATGAGCATTGCTATTGTCACGATGAAGCTGGC
CGCCGTCTCCACCGTCTCCATGGCCTGTATGGCTGGCTTCGCCAGCTCGT
TCGTGTTGCCTTCTTCGTCCTTGAGCAGCAGAGTTGCGCGGCCCGTTTCG
CGCACTTCCCTTGCCAGCAGCACCGGCGGCGGCAGCCGTTCCTACGCCTC
TCCGCGGATGAGCATTGCTATTGTCACGGGAGCAAGCCGCGGTCTGGGCG
CGGCGATCGCCAAGGACCTCGCCGGTGCGGGCTGCAGCGTGATCGTCAAT
TATGCGGCGTCCTCGGGGGCAGCCGAAGAGGCAAGGAGCAAGCCGCGGTC
TGGGCGCGGCGATCGCCAAGGACCTCGCCGGTGCGGGCTGCAGCGTGATC
GTCAATTATGCGGCGTCCTCGGGGGCAGCCGAAGAGGCAATGAAGGCCAT
CCAGGAGGCCGGAGGCAAGGCCGCGGCCGTGAAGGCGGACGTCTCCAAGT
TGGACGAAGTGACGGCGCTCTTCAAGGAATCCGCGGAGGCTTTCCCCGAG
GAGAATATCGAGTGAAGGCCATCCAGGAGGCCGGAGGCAAGGCCGCGGCC
GTGAAGGCGGACGTCTCCAAGTTGGACGAAGTGACGGCGCTCTTCAAGGA
ATCCGCGGAGGCTTTCCCCGAGGAGAATATCGAGGTGGTCGTGAACAACG
CCGGCATCACGCGGGACACCCTGGCCATGCGGATGAAGCCCGACCAGTGG
CAATCGGTGGTCGTGAACAACGCCGGCATCACGCGGGACACCCTGGCCAT
GCGGATGAAGCCCGACCAGTGGCAATCGGTGATCGACCTGAACCTGAGCG
GGGTGTTCTACGTCTCCCAGGCGGCGTGCAAGCTCATGCTCAAGCAGCGC
AAGGGCCGCATCGTCAACATATCGTCCATCGTGGGTCTCATTGGCAACCC
CGGACAAGCCAACTATGCCGCTGCAAAGGTGATCGACCTGAACCTGAGCG
GGGTGTTCTACGTCTCCCAGGCGGCGTGCAAGCTCATGCTCAAGCAGCGC
AAGGGCCGCATCGTCAACATATCGTCCATCGTGGGTCTCATTGGCAACCC
CGGACAAGCCAACTATGCCGCTGCAAAGGCTGGCGTGATCGGCATGACGA
TGTCCATGGCGAGAGAGTTCGCGGGGCGAGGCGTGACCGTGAACGCGGTG
TGCCCGGGCTTCATCGAGAGCGACATGACCGCCGAGCTGGACCAAGACGC
CATCAAGAAGATGATCCCCCTCGGCAGGCTCGGAAAGCCGGAAGAGATCG
CGGGGATGGTCAAGCTGGCGTGATCGGCATGACGATGTCCATGGCGAGAG
AGTTCGCGGGGCGAGGCGTGACCGTGAACGCGGTGTGCCCGGGCTTCATC
GAGAGCGACATGACCGCCGAGCTGGACCAAGACGCCATCAAGAAGATGAT
CCCCCTCGGCAGGCTCGGAAAGCCGGAAGAGATCGCGGGGATGGTCAAGT
TCATCGCCACGGAGGACAGCGCGGCGTACATCACGGGCCAGAGCTTCACC
GTGGACGGCGGAATGGCCATCGGCGCATGAGTTCATCGCCACGGAGGACA
GCGCGGCGTACATCACGGGCCAGAGCTTCACCGTGGACGGCGGAATGGCC
ATCGGCGCATGA
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